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Keun Pil Kim 4 Articles
Inhibition of KIF20A suppresses the replication of influenza A virus by inhibiting viral entry
Hoyeon Jeon , Younghyun Lim , In-Gu Lee , Dong-In Kim , Keun Pil Kim , So-Hee Hong , Jeongkyu Kim , Youn-Sang Jung , Young-Jin Seo
J. Microbiol. 2022;60(11):1113-1121.   Published online November 1, 2022
DOI: https://doi.org/10.1007/s12275-022-2436-x
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AbstractAbstract PDF
The influenza A virus (IAV) has caused several pandemics, and therefore there are many ongoing efforts to identify novel antiviral therapeutic strategies including vaccines and antiviral drugs. However, influenza viruses continuously undergo antigenic drift and shift, resulting in the emergence of mutated viruses. In turn, this decreases the efficiency of existing vaccines and antiviral drugs to control IAV infection. Therefore, this study sought to identify alternative therapeutic strategies targeting host cell factors rather than viruses to avoid infection by mutated viruses. Particularly, we investigated the role of KIF20A that is one of kinesin superfamily proteins in the replication of IAV. The KIF20A increased viral protein levels in IAV-infected cells by regulating the initial entry stage during viral infection. Furthermore, the KIF20A inhibitor significantly suppressed viral replication, which protected mice from morbidity and mortality. Therefore, our findings demonstrated that KIF20A is highly involved in the viral replication process and viral propagation both in vitro and in vivo, and could thus be used as a target for the development of novel antiviral drugs.

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Citations to this article as recorded by  
  • Zika virus entry inhibitors
    Weiyi Yin, Rui Zhou, Wencui Zhang, Yanping Li
    Bioorganic & Medicinal Chemistry.2026; 137: 118611.     CrossRef
  • Inhibiting kinesin family member 20A disrupts Zika virus entry by blocking internalization
    Jeonghyeon Lee, Younghyun Lim, Hyeong-Rae Kim, Yong-Bin Cho, In-Gu Lee, Young-Jin Seo
    Journal of Microbiology.2025; 63(6): e2503008.     CrossRef
  • Deciphering European Sea Bass (Dicentrarchus labrax) Resistance to Nervous Necrosis Virus by Transcriptome Analysis from Early Infection Towards Establishment of Virus Carrier State
    Dimitra K. Toubanaki, Odysseas-Panagiotis Tzortzatos, Antonia Efstathiou, Vasileios Bakopoulos, Evdokia Karagouni
    International Journal of Molecular Sciences.2025; 26(18): 9220.     CrossRef
  • Emerging roles of cytoskeletal transport and scaffold systems in human viral propagation
    Younghyun Lim, Yong-Bin Cho, Young-Jin Seo
    Animal Cells and Systems.2024; 28(1): 506.     CrossRef
Yeast polyubiquitin unit regulates synaptonemal complex formation and recombination during meiosis
Min-Kyung Jo , Kiwon Rhee , Keun Pil Kim , Soogil Hong
J. Microbiol. 2022;60(7):705-714.   Published online July 4, 2022
DOI: https://doi.org/10.1007/s12275-022-2204-y
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  • 1 Web of Science
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AbstractAbstract PDF
Ubiquitin is highly conserved in most eukaryotes and involved in diverse physiological processes, including cell division, protein quality control, and protein degradation mediated by the ubiquitin-proteasome system after heat shock, glucose-starvation, and oxidative stress. However, the role of the ubiquitin gene UBI4, which contains five consecutive head-to-tail ubiquitin repeats, in meiosis has not been investigated. In this study, we show that the Saccharomyces cerevisiae polyubiquitin precursor gene, UBI4, is required to promote synaptonemal complex (SC) formation and suppress excess doublestrand break formation. Moreover, the proportion of Zip1 polycomplexes, which indicate abnormal SC formation, in cells with a mutation in UBI4 (i.e., ubi4Δ cells) is higher than that of wild-type cells, implying that the UBI4 plays an important role in the early meiotic prophase I. Interestingly, although ubi4Δ cells rarely form full-length SCs in the pachytene stage of prophase I, the Zip3 foci are still seen, as in wild-type cells. Moreover, ubi4Δ cells proficiently form crossover and noncrossover products with a slight delay compared to wild-type cells, suggesting that UBI4 is dispensable in SCcoupled recombination. Our findings demonstrate that UBI4 exhibits dual functions that are associated with both positive and negative roles in SC formation and recombination during meiosis.

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  • The deubiquitinase Usp7 in Drosophila melanogaster is required for synaptonemal complex maintenance
    Cathleen M. Lake, Jennifer Gardner, Salam Briggs, Zulin Yu, Grace McKown, R. Scott Hawley
    Proceedings of the National Academy of Sciences.2024;[Epub]     CrossRef
Meiotic prophase roles of Pds5 in recombination and chromosome condensation in budding yeast
Jeong Hwan Joo , Hyun Ah Kang , Keun Pil Kim , Soogil Hong
J. Microbiol. 2022;60(2):177-186.   Published online February 1, 2022
DOI: https://doi.org/10.1007/s12275-022-1635-9
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AbstractAbstract PDF
Genetic variation in eukaryotes is mediated during meiosis by the exchange of genetic material between homologous chromosomes to produce recombinant chromosomes. Cohesin is essential to promote proper chromosome segregation, chromosome morphogenesis, and recombination in meiotic cells. Cohesin consists of three main subunits–Smc1, Smc3, and the kleisin subunit Mcd1/Scc1 (Rec8 in meiosis)–and cohesin accessory factors. In Saccharomyces cerevisiae, the cohesin regulatory subunit Pds5 plays a role in homolog pairing, meiotic axis formation, and interhomolog recombination. In this study, we examine the prophase functions of Pds5 by performing physical analysis of recombination and three-dimensional high-resolution microscopy analysis to identify its roles in meiosis-specific recombination and chromosome morphogenesis. To investigate whether Pds5 plays a role in mitoticlike recombination, we inhibited Mek1 kinase activity, which
result
ed in switching to sister template bias by Rad51-dependent recombination. Reductions in double-strand breaks and crossover products and defective interhomolog recombination occurred in the absence of Pds5. Furthermore, recombination intermediates, including single-end invasion and double-Holliday junction, were reduced in the absence of Pds5 with Mek1 kinase inactivation compared to Mek1 kinase inactivation cells. Interestingly, the absence of Pds5
result
ed in increasing numbers of chromosomes with hypercompaction of the chromosome axis. Thus, we suggest that Pds5 plays an essential role in recombination by suppressing the pairing of sister chromatids and abnormal compaction of the chromosome axis.

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  • Recombination-coupled DNA synthesis facilitates post-invasion steps in meiotic crossover and noncrossover formations
    Hyungseok Choi, Jun Seo Lee, Jeong H Joo, Soogene Lee, Keun P Kim
    Nucleic Acids Research.2025;[Epub]     CrossRef
  • Multiple Autopolyploid Arabidopsis lyrata Populations Stabilized by Long-Range Adaptive Introgression Across Eurasia
    Alison D Scott, Uliana K Kolesnikova, Anna Glushkevich, Laura Steinmann, Nikita P Tikhomirov, Ursula Pfordt, Magdalena Bohutínská, Robin Burns, Alexey P Seregin, Filip Kolar, Roswitha Schmickl, Polina Yu Novikova, Kathryn Hodgins
    Molecular Biology and Evolution.2025;[Epub]     CrossRef
  • RPA interacts with Rad52 to promote meiotic crossover and noncrossover recombination
    Jeong H Joo, Soogil Hong, Mika T Higashide, Eui-Hwan Choi, Seobin Yoon, Min-Su Lee, Hyun Ah Kang, Akira Shinohara, Nancy Kleckner, Keun P Kim
    Nucleic Acids Research.2024; 52(7): 3794.     CrossRef
  • Cohesin is required for meiotic spindle assembly independent of its role in cohesion in C. elegans
    Karen P. McNally, Elizabeth A. Beath, Brennan M. Danlasky, Consuelo Barroso, Ting Gong, Wenzhe Li, Enrique Martinez-Perez, Francis J. McNally, Sarit Smolikove
    PLOS Genetics.2022; 18(10): e1010136.     CrossRef
  • Yeast polyubiquitin unit regulates synaptonemal complex formation and recombination during meiosis
    Min-Kyung Jo, Kiwon Rhee, Keun Pil Kim, Soogil Hong
    Journal of Microbiology.2022; 60(7): 705.     CrossRef
Molecular characterization of Hsf1 as a master regulator of heat shock response in the thermotolerant methylotrophic yeast Ogataea parapolymorpha
Jin Ho Choo , Su-Bin Lee , Hye Yun Moon , Kun Hwa Lee , Su Jin Yoo , Keun Pil Kim , Hyun Ah Kang
J. Microbiol. 2021;59(2):151-163.   Published online February 1, 2021
DOI: https://doi.org/10.1007/s12275-021-0646-2
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  • 5 Web of Science
  • 6 Crossref
AbstractAbstract PDF
Ogataea parapolymorpha (Hansenula polymorpha DL-1) is a thermotolerant methylotrophic yeast with biotechnological applications. Here, O. parapolymorpha genes whose expression is induced in response to heat shock were identified by transcriptome analysis and shown to possess heat shock elements (HSEs) in their promoters. The function of O. parapolymorpha HSF1 encoding a putative heat shock transcription factor 1 (OpHsf1) was characterized in the context of heat stress response. Despite exhibiting low sequence identity (26%) to its Saccharomyces cerevisiae homolog, OpHsf1 harbors conserved domains including a DNA binding domain (DBD), domains involved in trimerization (TRI), transcriptional activation (AR1, AR2), transcriptional repression (CE2), and a C-terminal modulator (CTM) domain. OpHSF1 could complement the temperature sensitive (Ts) phenotype of a S. cerevisiae hsf1 mutant. An O. parapolymorpha strain with an H221R mutation in the DBD domain of OpHsf1 exhibited significantly retarded growth and a Ts phenotype. Intriguingly, the expression of heat-shock-protein‒coding genes harboring HSEs was significantly decreased in the H221R mutant strain, even under non-stress conditions, indicating the importance of the DBD for the basal growth of O. parapolymorpha. Notably, even though the deletion of C-terminal domains (ΔCE2, ΔAR2, ΔCTM) of OpHsf1 destroyed complementation of the growth defect of the S. cerevisiae hsf1 strain, the C-terminal domains were shown to be dispensable in O. parapolymorpha. Overexpression of OpHsf1 in S. cerevisiae increased resistance to transient heat shock, supporting the idea that OpHsf1 could be useful in the development of heatshock‒ resistant yeast host strains.

Citations

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  • Thermotolerant yeasts and their biotechnological applications
    Roksolana Vasylyshyn, Justyna Ruchala, Kostyantyn Dmytruk, Andriy Sibirny
    Trends in Biotechnology.2026;[Epub]     CrossRef
  • Lignocellulosic biomass fermentation: a roadmap for Candida famata and Ogataea polymorpha
    Dominik Wojdyła, Roksolana Vasylyshyn, Alicja Najdecka, Justyna Ruchala
    FEMS Yeast Research.2025;[Epub]     CrossRef
  • Sucrose‐Induced Transcriptomic Response in Ogataea polymorpha TBRC 4839 Reveals its Potential for Recombinant Protein Production
    Somsak Likhitrattanapisal, Chitwadee Phithakrotchanakoon, Aekkachai Puseenam, Paopit Siriarchawatana, Natta Wiriyakun, Jiraprapa Nirapun, Warasirin Sornlek, Supawadee Ingsriswang, Niran Roongsawang
    Yeast.2025; 42(8-10): 181.     CrossRef
  • A comprehensive review and comparison of L-tryptophan biosynthesis in Saccharomyces cerevisiae and Escherichia coli
    Xinru Ren, Yue Wei, Honglu Zhao, Juanjuan Shao, Fanli Zeng, Zhen Wang, Li Li
    Frontiers in Bioengineering and Biotechnology.2023;[Epub]     CrossRef
  • Heat shock in Cronobacter sakazakii induces direct protection and cross-protection against simulated gastric fluid stress
    Hongmei Niu, MingzheYang, Yonghua Qi, Yangtai Liu, Xiang Wang, Qingli Dong
    Food Microbiology.2022; 103: 103948.     CrossRef
  • A review of yeast: High cell-density culture, molecular mechanisms of stress response and tolerance during fermentation
    Dongxu Shen, Xiaoli He, Peifang Weng, Yanan Liu, Zufang Wu
    FEMS Yeast Research.2022;[Epub]     CrossRef
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