MSK
Search
- Page Path
- HOME > Search
Research Support, Non-U.S. Gov'ts
- Analysis of Bacterial Diversity in Sponges Collected from Chuuk and Kosrae Islands in Micronesia
- In-Hye Jeong , Kyoung-Ho Kim , Hyi-Seung Lee , Jin-Sook Park
- J. Microbiol. 2014;52(1):20-26. Published online January 4, 2014
- DOI: https://doi.org/10.1007/s12275-014-3619-x
- 74 View
- 0 Download
- 3 Crossref
-
Abstract
- The bacteria resident in sponges collected from Chuuk Lagoon and Kosrae Island of Micronesia were investigated using the 16S rRNA gene PCR-tagged pyrosequencing method. These sponges were clustered into 5 groups based on their bacterial composition. Diversity indexes and cumulative rank abundance curves showed the different compositions of bacterial communities in the various groups of sponges. Reads related to the phylum Chloroflexi were observed predominantly (9.7–68.2%) in 9 sponges of 3 groups and unobserved in the other 2 groups. The Chloroflexi-containing group had similar bacterial patterns at the phylum and lower taxonomic levels, for example, significant proportions of Acidobacteria, Gemmatimonadetes, SBR1093, and PAUC34f were observed in most members of this group. The three groups in the Chloroflexi- containing group, however, showed some minor differences in the composition and diversity. The other two groups contained high proportions of Proteobacteria (>87%) or Bacteroidetes (>61%) and different composition and diversity compared to the Chloroflexi-containing group and each other. Four pairs of specimens with the same species showed similar bacterial profiles, but, the bacteria in sponges were highly specific at the individual level.
-
Citations
Citations to this article as recorded by
- Identification of marine sponge-associated bacteria of the Saint Martin's island of the Bay of Bengal emphasizing on the prevention of motile Aeromonas septicemia in Labeo rohita
Sulav Indra Paul, Md. Mahbubur Rahman, Mohammad Abdus Salam, Md. Arifur Rahman Khan, Md. Tofazzal Islam
Aquaculture.2021; 545: 737156. CrossRef - First Record of Microbiomes of Sponges Collected From the Persian Gulf, Using Tag Pyrosequencing
Akram Najafi, Maryam Moradinasab, Iraj Nabipour
Frontiers in Microbiology.2018;[Epub] CrossRef - Acidobacteriaappear to dominate the microbiome of two sympatric Caribbean Sponges and one Zoanthid
Aileen O’Connor-Sánchez, Adán J Rivera-Domínguez, César De los Santos-Briones, Lluvia K López-Aguiar, Yuri J Peña-Ramírez, Alejandra Prieto-Davo
Biological Research.2014;[Epub] CrossRef
- Identification of marine sponge-associated bacteria of the Saint Martin's island of the Bay of Bengal emphasizing on the prevention of motile Aeromonas septicemia in Labeo rohita
- Analysis of Bacterial Diversity in Sponges Collected off Chujado, an Island in Korea, Using Barcoded 454 Pyrosequencing: Analysis of a Distinctive Sponge Group Containing Chloroflexi
- In-Hye Jeong , Kyoung-Ho Kim , Jin-Sook Park
- J. Microbiol. 2013;51(5):570-577. Published online October 31, 2013
- DOI: https://doi.org/10.1007/s12275-013-3426-9
- 74 View
- 0 Download
- 12 Crossref
-
Abstract
- The bacterial diversity of 14 sponges belonging to 5 different orders that were collected around Chuja Island, Korea was investigated using barcoded 454 pyrosequencing. The sponges contained many unidentified bacterial groups (e.g. more than half of the taxa at the family level) that were known only in environmental sequences and obtained from culture-independent methods. Five of the sponges were clustered into one notable group (CF group), which was distinguished from the other sponges in accordance with bacterial composition (the other sponges may be separated into more groups but clustering is not clear). The CF group contained high amounts of Chloroflexi (25.0–47.7%) and moderate amounts of Gemmatimonadetes (2.3–7.0%), AncK6 (0.6–2.2%), PAUC34f (0.8–6.0%), Acidobacteria (3.7–9.6%), and SBR1093 (1.8–5.6%) exclusively or almost exclusively to this group. Sponges in the CF group also showed higher diversity (e.g. Shannon index) than the other sponges and contained group-specific taxonomic lineages (e.g. class or family level) from group-specific phyla and even from the Proteobacteria and Actinobacteria, which were detected in all sponges at the phylum level. The CF group may be one of the most distinctive groups in sponges in terms of bacterial diversity.
-
Citations
Citations to this article as recorded by- The effect of environmental and anthropogenic factors on the microbiome of the sponge, Halichondria panicea, at three coastal sites with different bathing water quality in North east England
Sakinah Al-Haddad, Gary S. Caldwell, Anthony S. Clare
Aquatic Sciences.2025;[Epub] CrossRef - Diversity and functional roles of the symbiotic microbiome associated to marine sponges off Karah Island, Terengganu, Malaysia
Yuki Hayami, Logajothiswaran Ambalavanan, Sandra Catherine Zainathan, Muhd Danish-Daniel, Noor Emilia Sharifah, Shumpei Iehata
Regional Studies in Marine Science.2023; 62: 102967. CrossRef - Pyrosequencing reveals sponge specific bacterial communities in marine sponges of Red Sea, Saudi Arabia
Fehmida Bibi, Sana Akhtar Alvi, Abdulmohsin Al-Sofyani, Muhammad Imran Naseer, Muhammad Yasir, Esam Ibraheem Azhar
Saudi Journal of Biological Sciences.2020; 27(1): 67. CrossRef - First Record of Microbiomes of Sponges Collected From the Persian Gulf, Using Tag Pyrosequencing
Akram Najafi, Maryam Moradinasab, Iraj Nabipour
Frontiers in Microbiology.2018;[Epub] CrossRef - Prokaryote composition and predicted metagenomic content of two Cinachyrella Morphospecies and water from West Papuan Marine Lakes
Daniel F R Cleary, Ana R M Polónia, Nicole J de Voogd
FEMS Microbiology Ecology.2018;[Epub] CrossRef - Metabolic Roles of Uncultivated Bacterioplankton Lineages in the Northern Gulf of Mexico “Dead Zone”
J. Cameron Thrash, Kiley W. Seitz, Brett J. Baker, Ben Temperton, Lauren E. Gillies, Nancy N. Rabalais, Bernard Henrissat, Olivia U. Mason, Mary Ann Moran
mBio.2017;[Epub] CrossRef - Intestinal microecology associated with fluoride resistance capability of the silkworm (Bombyx mori L.)
Guan-Nan Li, Xue-Juan Xia, Wen-Chao Tang, Yong Zhu
Applied Microbiology and Biotechnology.2016; 100(15): 6715. CrossRef - In four shallow and mesophotic tropical reef sponges from Guam the microbial community largely depends on host identity
Georg Steinert, Michael W. Taylor, Peter Deines, Rachel L. Simister, Nicole J. de Voogd, Michael Hoggard, Peter J. Schupp
PeerJ.2016; 4: e1936. CrossRef - Effect of long-term different fertilization on bacterial community structures and diversity in citrus orchard soil of volcanic ash
Jae Ho Joa, Hang Yeon Weon, Hae Nam Hyun, Young Chull Jeun, Sang Wook Koh
Journal of Microbiology.2014; 52(12): 995. CrossRef - Two distinct microbial communities revealed in the sponge Cinachyrella
Marie L. Cuvelier, Emily Blake, Rebecca Mulheron, Peter J. McCarthy, Patricia Blackwelder, Rebecca L. Vega Thurber, Jose V. Lopez
Frontiers in Microbiology.2014;[Epub] CrossRef - Analysis of bacterial diversity in sponges collected from chuuk and kosrae islands in micronesia
In-Hye Jeong, Kyoung-Ho Kim, Hyi-Seung Lee, Jin-Sook Park
Journal of Microbiology.2014; 52(1): 20. CrossRef - Bacterial Diversity of the South Pacific Sponge, Dactylospongia metachromia Based on DGGE Fingerprinting
In-Hye Jeong, Jin-Sook Park
The Korean Journal of Microbiology.2013; 49(4): 377. CrossRef
- The effect of environmental and anthropogenic factors on the microbiome of the sponge, Halichondria panicea, at three coastal sites with different bathing water quality in North east England
First
Prev
TOP
