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Phylogenetic Relationships of Korean Sparassis latifolia Based on Morphological and ITS rDNA Characteristics
Rhim Ryoo , Hong-Duck Sou , Kang-Hyeon Ka , Hyun Park
J. Microbiol. 2013;51(1):43-48.   Published online March 2, 2013
DOI: https://doi.org/10.1007/s12275-013-2503-4
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  • 17 Crossref
AbstractAbstract
Recent studies based on morphological characteristics and molecular analyses have revealed that the characteristics of Sparassis crispa from Asia are not concordant with those of collections from Europe and North America. Consequently, the Asian isolate was redefined as Sparassis latifolia. This study is the first report of Sparassis latifolia collected in Korea. The taxonomic relationships and replacement of Sparassis species were inferred from a comparison of the morphological characteristics and by molecular sequence analysis of the internal transcribed spacer (ITS) rDNA regions. In particular, this study focused on the phylogenetic relationships inferred from the biogeographical distribution of isolates within the genus Sparassis.

Citations

Citations to this article as recorded by  
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    Ayushi Mahajan, Sandhya Rajput, Komal Verma, Yash Pal Sharma
    Indian Phytopathology.2025;[Epub]     CrossRef
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  • Medicinal, nutritional, and nutraceutical potential of Sparassis crispa s. lat.: a review
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    IMA Fungus.2022;[Epub]     CrossRef
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    Scientific Reports.2022;[Epub]     CrossRef
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  • Alginate-Derived Elicitors Enhance β-Glucan Content and Antioxidant Activities in Culinary and Medicinal Mushroom, Sparassis latifolia
    Yong-Woon Kim, Yuanzheng Wu, Moon-Hee Choi, Hyun-Jae Shin, Jishun Li
    Journal of Fungi.2020; 6(2): 92.     CrossRef
  • The complete mitochondrial genome of an edible mushroom, Sparassis crispa
    Khawaja Muhammad Imran Bashir, Kyoung Min Rheu, Moo-Sang Kim, Man-Gi Cho
    Mitochondrial DNA Part B.2020; 5(1): 862.     CrossRef
  • Sparassis crispa exerts anti-inflammatory activity via suppression of TLR-mediated NF-κB and MAPK signaling pathways in LPS-induced RAW264.7 macrophage cells
    Jang Mi Han, Eun Kyeong Lee, So Youn Gong, Jae Kyung Sohng, Yue Jai Kang, Hye Jin Jung
    Journal of Ethnopharmacology.2019; 231: 10.     CrossRef
  • Notes, outline and divergence times of Basidiomycota
    Mao-Qiang He, Rui-Lin Zhao, Kevin D. Hyde, Dominik Begerow, Martin Kemler, Andrey Yurkov, Eric H. C. McKenzie, Olivier Raspé, Makoto Kakishima, Santiago Sánchez-Ramírez, Else C. Vellinga, Roy Halling, Viktor Papp, Ivan V. Zmitrovich, Bart Buyck, Damien Er
    Fungal Diversity.2019; 99(1): 105.     CrossRef
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    Rhim Ryoo, Hong-Duck Sou, Kang-Hyeon Ka, Hyun Park
    Forest Science and Technology.2018; 14(3): 119.     CrossRef
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    Chi Yang, Lu Ma, Zhenghe Ying, Xiaoling Jiang, Yanquan Lin
    Current Microbiology.2017; 74(4): 469.     CrossRef
  • The mycelial growth and ligninolytic enzyme activity of cauliflower mushroom (Sparassis latifolia)
    Hong-Duck Sou, Rhim Ryoo, Kang-Hyeon Ka, Hyun Park
    Forest Science and Technology.2017; 13(4): 158.     CrossRef
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    L. L. Shu, Y. Li
    Plant Disease.2017; 101(5): 833.     CrossRef
  • Nematicidal effect of Sparassis latifolia-derived sparassol and disodium sparassol against Bursaphelenchus xylophilus
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  • The Quantities of Methyl Orsellinate and Sparassol of Sparassis latifolia by Host Plants
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    The Korean Journal of Mycology.2013; 41(4): 236.     CrossRef
  • Morphological and genetic characteristics of newly crossbred cauliflower mushroom (Sparassis latifolia)
    Hong-Duck Sou, Rhim Ryoo, Sung-Ryul Ryu, Kang-Hyeon Ka, Hyun Park, Sung-Hyun Joo
    Journal of Microbiology.2013; 51(5): 552.     CrossRef
Genetic Diversity and Structure of Cordyceps sinensis Populations from Extensive Geographical Regions in China as Revealed by Inter-Simple Sequence Repeat Markers
Hong-Hui Liang , Zhou Cheng , Xiao-Ling Yang , Shan Li , Zu-Quan Ding , Tong-Shui Zhou , Wen-Ju Zhang , Jia-Kuan Chen
J. Microbiol. 2008;46(5):549-556.   Published online October 31, 2008
DOI: https://doi.org/10.1007/s12275-008-0107-1
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  • 33 Crossref
AbstractAbstract
Cordyceps sinensis is one of the most valuable medicinal caterpillar fungi native to China. However, its productivity is extremely limited and the species is becoming endangered. The genetic diversity of eighteen C. sinensis populations across its major distributing regions in China was evaluated by inter-simple sequence repeat (ISSR) markers. A total of 141 markers were produced in 180 individuals from the 18 populations, of which 99.3% were polymorphic. The low average of Shannon (0.104) and Nei index (0.07) of the 18 populations indicates that there are little genetic variations within populations. For all 18 populations, estimates of total gene diversity (HT), gene diversity within populations (HS), coefficient of genetic differentiation (GST), and gene flow (Nm) were 0.170, 0.071, 0.583, and 0.357, respectively. This pattern suggests that the genetic diversity of C. sinensis is low and most of the ISSR variations are found among populations with little gene exchange. The 18 populations are divided into five groups based on the genetic distance and the grouping pattern matches with the geographic distribution along the latitudinal gradient. The five groups show obvious difference in the GST and Nm values. Therefore, the genetic diversification of C. sinensis populations may be determined by geographic isolation and the combined effects of life history characters and the interaction with host insect species. The information illustrated by this study is useful for selecting in situ conservation sites of C. sinensis.

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Introductory Journal Article
[Editorial]Omics-based microbiome analysis in microbial ecology: from sequences to information
Jang-Cheon Cho
J. Microbiol. 2021;59(3):229-232.
DOI: https://doi.org/10.1007/s12275-021-0698-3
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  • 6 Web of Science
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AbstractAbstract
Microbial ecology is the study of microorganisms present in nature. It particularly focuses on microbial interactions with any biota and with surrounding environments. Microbial ecology is entering its golden age with innovative multi-omics
methods
triggered by next-generation sequencing technologies. However, the extraction of ecologically relevant information from ever-increasing omics data remains one of the most challenging tasks in microbial ecology. This special issue includes 11 review articles that provide an overview of the state of the art of omics-based approaches in the field of microbial ecology, with particular emphasis on the interpretation of omics data, environmental pollution tracking, interactions in microbiomes, and viral ecology.

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