Journal Articles
- Silver Nanoparticles Modified with Polygonatum sibiricum Polysaccharide Improve Biocompatibility and Infected Wound Bacteriostasis
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Ruonan Wang , Rongyu Li , Peng Zheng , Zicheng Yang , Cheng Qian , Zhou Wang , Senhe Qian
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J. Microbiol. 2023;61(5):543-558. Published online April 13, 2023
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DOI: https://doi.org/10.1007/s12275-023-00042-8
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Abstract
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Silver nanoparticles (AgNPs) exhibit strong antibacterial activity and do not easily induce drug resistance; however, the
poor stability and biocompatibility in solution limit their widespread application. In this study, AgNPs were modified with
Polygonatum sibiricum Polysaccharide (PSP) to synthesize PSP@AgNPs with good stability, biocompatibility, and antibacterial
activity. When PSP@AgNP synthesis was performed under a reaction time of 70 min, a reaction temperature of 35 °C,
and an AgNO3-
to-PSP volume ratio of 1:1, the synthesized PSP@AgNPs were more regular and uniform than AgNPs, and
their particle size was around 10 nm. PSP@AgNPs exhibited lower cytotoxicity and hemolysis, and stronger bacteriostatic
activity. PSP@AgNPs damage the integrity and internal structure of cells, resulting in the leakage of intracellular nucleic
acids and proteins. The rate of cell membrane damage in Escherichia coli and Staphylococcus aureus treated with PSP@
AgNPs increased by 38.52% and 43.75%, respectively, compared with that of AgNPs. PSP@AgNPs inhibit the activities
of key enzymes related to antioxidant, energy and substance metabolism in cells. The inhibitory effects on the activities of
superoxide dismutase (SOD), catalase (CAT), adenosine triphosphate enzyme (ATPase), malate dehydrogenase (MDH),
and succinate dehydrogenase (SDH) in E. coli and S. aureus cells were significantly higher than those of AgNPs. In addition,
compared with AgNPs, PSP@AgNPs promote faster healing of infected wounds. Therefore, PSP@AgNPs represent
potential antibacterial agents against wound infections.
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- Fabrication of Highly Stable Polyurushiol-Decorated Silver Nanoparticles and Evaluation of Their Antibacterial and Anti-Microalgae Activities
Lu Zheng, Jide Zhu, Jipeng Chen, Yanlian Xu, Lilong Jiang
Journal of Inorganic and Organometallic Polymers and Materials.2025; 35(1): 570. CrossRef - Preparation, Structure, Function, and Application of Dietary Polysaccharides from Polygonatum sibiricum in the Food Industry: A Review
Peilin Li, Huimin Yao, Hao Yue, Jiali Huang, Qi Wang, Chuanbo Ding, Lina Ma, Xinglong Liu, Min Yang
Molecules.2025; 30(5): 1098. CrossRef - Improving the biocompatibility and antibacterial efficacy of silver nanoparticles functionalized with (LLRR)3 antimicrobial peptide
Rongyu Li, Jiaqing Mao, Peng Zheng, Ruonan Wang, Zicheng Yang, Senhe Qian
World Journal of Microbiology and Biotechnology.2024;[Epub] CrossRef - Advancing engineered approaches for sustainable wound regeneration and repair: Harnessing the potential of green synthesized silver nanoparticles
J. Nandhini, E. Karthikeyan, E. Elizabeth Rani, V.S. Karthikha, D. Sakthi Sanjana, H. Jeevitha, S. Rajeshkumar, Vijayan Venugopal, A. Priyadharshan
Engineered Regeneration.2024; 5(3): 306. CrossRef - Effect of Polygonatum sibiricum on biological toxicity of zinc oxide nanoparticles during respiratory exposure
Jingjing Yao, Wanqing Yang, Liang Tang, Dicheng Yang, Yan Xu, Shenmin Zhu, Jun Zhu
RSC Advances.2024; 14(43): 31360. CrossRef - Enhancing Healing of Infected Wounds with Glycerin‐Modified Sodium Alginate/Silk Sericin Composite Film Functionalized with Polygonatum sibiricum Polysaccharide‐Capped Silver Nanoparticles
Zicheng Yang, Rongyu Li, Ruonan Wang, Senhe Qian
ChemistrySelect.2024;[Epub] CrossRef - Host Defense Peptides: Exploiting an Innate Immune Component Against Infectious Diseases and Cancer
Taiwo Scholes Adewole, Oladiran Boniface Oladokun, Adenike Kuku
International Journal of Peptide Research and Therapeutics.2024;[Epub] CrossRef - Research progress on medicinal components and pharmacological activities of polygonatum sibiricum
Ruilian Liu, Xili Zhang, Yuhan Cai, Shuang Xu, Qian Xu, Chengli Ling, Xin Li, Wenjiao Li, Pingan Liu, Wenlong Liu
Journal of Ethnopharmacology.2024; 328: 118024. CrossRef - A comprehensive review on the potential applications of medicine Polygonatum species in the food sector
Mi Li, Bingzong Xie, Lewen Li, Yunge Zhang, Qingmin Chen, Jian Ju, Yanli Ma
Food Bioscience.2024; 60: 104116. CrossRef - Metallic elements combine with herbal compounds upload in microneedles to promote wound healing: a review
Xiao Tang, Li Li, Gehang You, Xinyi Li, Jian Kang
Frontiers in Bioengineering and Biotechnology.2023;[Epub] CrossRef
- Antibiofilm effect of biofilm-dispersing agents on clinical isolates of Pseudomonas aeruginosa with various biofilm structures
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Soo-Kyoung Kim , Xi-Hui Li , Hyeon-Ji Hwang , Joon-Hee Lee
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J. Microbiol. 2018;56(12):902-909. Published online October 25, 2018
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DOI: https://doi.org/10.1007/s12275-018-8336-4
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Abstract
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Pseudomonas aeruginosa, an opportunistic human pathogen,
causes many biofilm-mediated chronic infections. In this study,
biofilm structures of various clinical strains of P. aeruginosa
isolated from hospitalized patients were examined and their
influence on the biofilm-dispersing effects of chemicals was
investigated. The clinical isolates formed structurally distinct
biofilms that could be classified into three different groups:
1) mushroom-like, 2) thin flat, and 3) thick flat structures.
A dispersion of these differently structured biofilms was induced
using two biofilm-dispersing agents, anthranilate and
sodium nitroprusside (SNP). Although both SNP and anthranilate
could disperse all types of biofilms, the thick flat biofilms
were dispersed less efficiently than the biofilms of other
structures. This suggests that biofilm-dispersing agents have
higher potency on the biofilms of porous structures than on
densely packed biofilms.
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- New insights into antimicrobial and antibiofilm effects of edible mushrooms
Ashaimaa Y. Moussa, Shaimaa Fayez, Hang Xiao, Baojun Xu
Food Research International.2022; 162: 111982. CrossRef - Modified poly(L-lysine)-based structures as novel antimicrobials for diabetic foot infections, an in-vitro study
Alicia Grace, Robert Murphy, Aoife Dillon, Diarmuid Smith, Sally-Ann Cryan, Andreas Heise, Deirdre Fitzgerald-Hughes
HRB Open Research.2022; 5: 4. CrossRef - Anthranilate Acts as a Signal to Modulate Biofilm Formation, Virulence, and Antibiotic Tolerance of Pseudomonas aeruginosa and Surrounding Bacteria
Hyeon-Ji Hwang, Xi-Hui Li, Soo-Kyoung Kim, Joon-Hee Lee, Cezar M. Khursigara
Microbiology Spectrum.2022;[Epub] CrossRef - Early plaque formation on PTFE membranes with expanded or dense surface structures applied in the oral cavity of human volunteers
Alberto Turri, Emina Čirgić, Furqan A. Shah, Maria Hoffman, Omar Omar, Christer Dahlin, Margarita Trobos
Clinical and Experimental Dental Research.2021; 7(2): 137. CrossRef - Antipathogenic Compounds That Are Effective at Very Low Concentrations and Have Both Antibiofilm and Antivirulence Effects against Pseudomonas aeruginosa
Hyeon-Ji Hwang, Heejeong Choi, Sojeong Hong, Hyung Ryong Moon, Joon-Hee Lee, Amanda G. Oglesby
Microbiology Spectrum.2021;[Epub] CrossRef -
Thermoregulation of
Pseudomonas aeruginosa
Biofilm Formation
Suran Kim, Xi-Hui Li, Hyeon-Ji Hwang, Joon-Hee Lee, Danilo Ercolini
Applied and Environmental Microbiology.2020;[Epub] CrossRef
- A murine colitis model developed using a combination of dextran sulfate sodium and Citrobacter rodentium
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Jin-Il Park , Sun-Min Seo , Jong-Hyung Park , Hee-Yeon Jeon , Jun-Young Kim , Seung-Hyun Ryu , Yang-Kyu Choi
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J. Microbiol. 2018;56(4):272-279. Published online April 2, 2018
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DOI: https://doi.org/10.1007/s12275-018-7504-x
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Abstract
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Adult mice were treated with dextran sulfate sodium (DSS)
and infected with Citrobacter rodentium for developing a
novel murine colitis model. C57BL/6N mice (7-week-old)
were divided into four groups. Each group composed of control,
dextran sodium sulfate-treated (DSS), C. rodentiuminfected
(CT), and DSS-treated and C. rodentium-infected
(DSS-CT) mice. The DSS group was administered 1% DSS
in drinking water for 7 days. The CT group was supplied
with normal drinking water for 7 days and subsequently infected
with C. rodentium via oral gavage. The DSS-CT group
was supplied with 1% DSS in drinking water for 7 days and
subsequently infected with C. rodentium via oral gavage. The
mice were sacrificed 10 days after the induction of C. rodentium
infection. The DSS-CT group displayed significantly
shorter colon length, higher spleen to body weight ratio, and
higher histopathological score compared to the other three
groups. The mRNA expression levels of tumor necrosis factor
(TNF)-α and interferon (INF)-γ were significantly upregulated;
however, those of interleukin (IL)-6 and IL-10 were
significantly downregulated in the DSS-CT group than in
the control group. These results demonstrated that a combination
of low DSS concentration (1%) and C. rodentium
infection could effectively induce inflammatory bowel disease
(IBD) in mice. This may potentially be used as a novel
IBD model, in which colitis is induced in mice by the combination
of a chemical and a pathogen.
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Citations
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- Compound Xuejie Preparation Improved Dextran Sulfate Sodium-Induced Ulcerative Colitis in Mice by Mitigating Inflammation-Induced Damage and Downregulating TNF-α Expression
M.M. Yajiao Zhao, M.D. Lin Jin, M.M. Xiaolong Yuan, M.D. Xiaochuan Liu, M.M. Guiming Zang
International Journal of Pharmacology.2024; 20(4): 652. CrossRef - Development of a novel complex inflammatory bowel disease mouse model: Reproducing human inflammatory bowel disease etiologies in mice
Sun-Min Seo, Na-Won Kim, Eun-Seon Yoo, Ji-Hun Lee, Ah-Reum Kang, Han-Bi Jeong, Won-Yong Shim, Dong-Hyun Kim, Young-Jun Park, Kieun Bae, Kyong-Ah Yoon, Yang-Kyu Choi, Pradeep Dudeja
PLOS ONE.2024; 19(11): e0311310. CrossRef - Protective Role of the Toll-Like Receptor 5 Agonist KMRC011 against Murine Colitis Induced by Citrobacter rodentium and Dextran Sulfate Sodium
Jun-Young Kim, Sun-Min Seo, Han-Woong Kim, Woo-Jong Lee, Yang-Kyu Choi
Journal of Microbiology and Biotechnology.2023; 33(1): 35. CrossRef - The inhibition of HACE1 ameliorates inflammatory responses in citrobacter rodentium-induced murine colitis through Nrf2/ NLRP3 signaling pathway
Ting QIU, Lu NIU, Yu ZHANG, Yifei LV
Food Science and Technology.2023;[Epub] CrossRef - Association between intestinal microbiota and inflammatory bowel disease
Yunchang Zhang, Xuemeng Si, Ling Yang, Hui Wang, Ye Sun, Ning Liu
Animal Models and Experimental Medicine.2022; 5(4): 311. CrossRef - Noni juice-fortified yogurt mitigates dextran sodium sulfate-induced colitis in mice through the modulation of inflammatory cytokines
So-Hee Kwon, Damini Kothari, Hae-In Jung, Jeong-Min Lim, Woong-Lae Kim, Hyuk-Cheol Kwon, Sung-Gu Han, Sun-Min Seo, Yang-Kyu Choi, Soo-Ki Kim
Journal of Functional Foods.2021; 86: 104652. CrossRef - Probiotic Bacillus cereus Alleviates Dextran Sulfate Sodium-Induced Colitis in Mice through Improvement of the Intestinal Barrier Function, Anti-Inflammation, and Gut Microbiota Modulation
Kangliang Sheng, Yifan Xu, Xiaowei Kong, Jingmin Wang, Xiangdong Zha, Yongzhong Wang
Journal of Agricultural and Food Chemistry.2021; 69(49): 14810. CrossRef
- A lactic acid bacterium isolated from kimchi ameliorates intestinal inflammation in DSS-induced colitis
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Jin-Soo Park , Inseong Joe , Paul Dong Rhee , Choon-Soo Jeong , Gajin Jeong
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J. Microbiol. 2017;55(4):304-310. Published online January 26, 2017
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DOI: https://doi.org/10.1007/s12275-017-6447-y
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Abstract
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Some species of lactic acid bacteria have been shown to be beneficial in inflammatory bowel disease (IBD). In the pre-sent study, a strain of lactic acid bacterium (Lactobacillus paracasei LS2) was isolated from the Korean food, kimchi, and was shown to inhibit the development of experimental colitis induced by dextran sulfate sodium (DSS). To inves-tigate the role of LS2 in IBD, mice were fed DSS in drinking water for seven days along with LS2 bacteria which were administered intragastrically to some of the mice, while phos-phate-buffered saline (PBS) was administered to others (the controls). The administration of LS2 reduced body weight loss and increased survival, and disease activity indexes (DAI) and histological scores indicated that the severity of colitis was significantly reduced. The production of inflammatory cy-tokines and myeloperoxidase (MPO) activity also decreased. Flow cytometry analysis showed that the number of Th1 (IFN-γ) population cells was significantly reduced in the LS2- administered mice compared with the controls. The admini-stration of LS2 induced the increase of CD4+FOXP3+ Treg cells, which are responsible for IL-10. Numbers of macro-phages (CD11b+ F4/80+), and neutrophils (CD11b+ Gr-1+) among lamina propria lymphocytes (LPL) were also reduced. These results indicate that LS2 has an anti-inflammatory effect and ameliorates DSS-induced colitis.
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Citations
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Yuhan Chen, Xiaofen Chen, Suqin Lin, Shengjun Huang, Lijuan Li, Mingzhi Hong, Jianzhou Li, Lili Ma, Juan Ma
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Jin-Sil Park, JeongWon Choi, Ji Ye Kwon, Kyung-Ah Jung, Chul Woo Yang, Sung-Hwan Park, Mi-La Cho
Journal of Translational Medicine.2018;[Epub] CrossRef - Preventative effects of Lactobacillus plantarum YS-3 on oxazolone-induced BALB/c colitis in mice
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Applied Biological Chemistry.2018; 61(3): 355. CrossRef - A survey of research papers on the health benefits of kimchi and kimchi lactic acid bacteria
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Research Support, Non-U.S. Gov'ts
- Molecular Cloning, Purification, and Characterization of a Superoxide Dismutase from a Fast-Growing Mycobacterium sp. Strain JC1 DSM 3803
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Ji-Sun Nam , Jee-Hyun Yoon , Hyun-Il Lee , Si Wouk Kim , Young-Tae Ro
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J. Microbiol. 2011;49(3):399-406. Published online June 30, 2011
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DOI: https://doi.org/10.1007/s12275-011-1046-9
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Abstract
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A cytosolic superoxide dismutase (SOD) was purified and characterized from a fast-growing Mycobacterium sp. strain JC1 DSM 3803 grown on methanol. The native molecular weight of the purified SOD was estimated to be 48 kDa. SDS-PAGE revealed a subunit of 23 kDa, indicating that the enzyme is a homodimer. The enzyme activity was inhibited by H2O2 and azide. The purified SOD contained 1.12 and 0.56 g-atom of Mn and Fe per mol of enzyme, respectively, suggesting that it may be a Fe/Mn cambialistic SOD. The apo-SOD reconstitution study revealed that Mn salts were more specific than Fe salts in the SOD activity. The gene encoding the SOD was identified from the JC1 cosmid genomic library by PCR screening protocol. The cloned gene, sodA, had an open reading frame (ORF) of 624 nt, encoding a protein with a calculated molecular weight of 22,930 Da and pI of 5.33. The deduced SodA sequence exhibited 97.6% identity with that of Mycobacterium fortuitum Mn-SOD and clustered with other mycobacterial Mn-SODs. A webtool analysis on the basis of SOD sequence and structure homologies predicted the SOD as a tetrameric Mn-SOD, suggesting that the protein is a dimeric Mn-SOD having tetramer-specific sequence and structure characteristics.
- Molecular Cloning, Purification, and Characterization of a Novel, Acidic, pH-Stable Endoglucanase from Martelella mediterranea
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Junli Dong , Yuzhi Hong , Zongze Shao , Ziduo Liu
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J. Microbiol. 2010;48(3):393-398. Published online June 23, 2010
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DOI: https://doi.org/10.1007/s12275-010-9361-0
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33
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31
Scopus
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Abstract
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A novel gene encoding an endoglucanase designated Cel5D was cloned from a marine bacterium Martelella mediterranea by genomic library. The gene had a 1,113 bp opening reading frame encoding a 371-amino-acid protein with a molecular mass of 40,508 Da and containing a putative signal peptide (41 amino acids). Cel5D
had low similarity (48-51% identity) with other known endoglucanases and consisted of one single catalytic domain, which belonged to the glycosyl hydrolase family 5. The maximum activity of Cel5D was observed at 60°C and pH 5.0. Cel5D displayed broad pH stability within the range of pH 3.0-11.0 and retained hydrolytic
activity in the presence of a wide variety of metal ions and some chemical reagents. These characteristics suggest that the enzyme has considerable potential in industrial applications.
- Iso-Superoxide Dismutase in Deinococcus grandis, a UV Resistant Bacterium
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Na-Rae Yun , Young Nam Lee
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J. Microbiol. 2009;47(2):172-177. Published online May 2, 2009
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DOI: https://doi.org/10.1007/s12275-008-0221-0
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53
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3
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Abstract
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Deinococcus grandis possesses two types of superoxide dismutase (SOD, E. C. 1.15.1.1.) that show distinct electrophoretic behavior, one that migrates slowly and the other that migrates rapidly (SOD-1 and SOD-2, respectively). In this study, SOD-1 was uniformly and abundantly detected, regardless of growth phase, whereas SOD-2 was not detected during early growth, but was detectable from the exponential growth phase. In addition, a substantial increase in SOD-2 was observed in cells that were treated with potassium superoxide or UV, which suggests that SOD-2 is an inducible protein produced in response to stressful environments. Insensitivity of SOD-1 to both H2O2 and cyanide treatment suggests that SOD-1 is MnSOD. However, SOD-2 would be FeSOD, since it lost activity in response to H2O2 treatment, but not to cyanide. Localization studies of D. grandis iso-SODs in sucrose-shocked cells suggest that SOD-1 is a membrane-associated enzyme, whereas SOD-2 is a cytosolic enzyme. In conclusion, SOD-1 seems to be an essential constitutive enzyme for viability and SOD-2 appears to be an inducible enzyme that is probably critical for survival upon UV irradiation and oxidative stress.
- Cloning, Expression, and Characterization of Thermostable Manganese Superoxide Dismutase from Thermoascus aurantiacus var. levisporus
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Ning-Ning Song , Yan Zheng , Shi-Jin E , Duo-Chuan Li
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J. Microbiol. 2009;47(1):123-130. Published online February 20, 2009
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DOI: https://doi.org/10.1007/s12275-008-0217-9
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40
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19
Crossref
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Abstract
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A superoxide dismutase (SOD) gene of Thermoascus aurantiacus var. levisporus, a thermophilic fungus, was cloned, sequenced, and expressed in Pichia pastoris and its gene product was characterized. The coding sequence predicted a 231 residues protein with a unique 35 amino acids extension at the N-terminus indicating a mitochondrial-targeting sequence. The content of Mn was 2.46 ug/mg of protein and Fe was not detected in the purified enzyme. The enzyme was found to be inhibited by NaN3, but not by KCN or H2O2. These results suggested that the SOD in Thermoascus aurantiacus var. levisporus was the manganese superoxide dismutase type. In comparison with other MnSODs, all manganese-binding sites were also conserved in the sequence (H88, H136, D222, H226). The molecular mass of a single band of the enzyme was estimated to be 21.7 kDa. The protein was expressed in tetramer form with molecular weight of 68.0 kDa. The activity of purified protein was 2,324 U/mg. The optimum temperature of the enzyme was 55oC and it exhibited maximal activity at pH 7.5. The enzyme was thermostable at 50 and 60oC and the half-life at 80oC was approximately 40 min.
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Citations
Citations to this article as recorded by

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Anne Grethe Hamre, Rim Al-Sadawi, Kirsti Merete Johannesen, Bastien Bisarro, Åsmund Røhr Kjendseth, Hanna-Kirsti S. Leiros, Morten Sørlie
JBIC Journal of Biological Inorganic Chemistry.2023; 28(7): 689. CrossRef - Thermoacidophilic Alicyclobacillus Superoxide Dismutase: Good Candidate as Additives in Food and Medicine
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Frontiers in Microbiology.2021;[Epub] CrossRef - Characterisation of recombinant thermostable manganese-superoxide dismutase (NeMnSOD) from Nerium oleander
Rashmi Gangwar, Poonam Kumari, Apurva Chatrath, Ramasare Prasad
Molecular Biology Reports.2020; 47(5): 3251. CrossRef - Characteristics of a Novel Manganese Superoxide Dismutase of a Hadal Sea Cucumber (Paelopatides sp.) from the Mariana Trench
Yanan Li, Xue Kong, Haibin Zhang
Marine Drugs.2019; 17(2): 84. CrossRef - Two superoxide dismutases from TnOtchr are involved in detoxification of reactive oxygen species induced by chromate
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BMC Microbiology.2016;[Epub] CrossRef - Cloning and characterization of a differentially expressed mitochondrial manganese superoxide dismutase gene from Pleurotus ostreatus
Chaomin Yin, Wenxian Zhao, Jihong Zhu, Liesheng Zheng, Liguo Chen, Aimin Ma
Annals of Microbiology.2015; 65(3): 1597. CrossRef - High-level Expression of a Manganese Superoxide Dismutase (PoMn-SOD) from Pleurotus ostreatus in Pichia pastoris
Chaomin Yin, Wenxia Zhao, Liesheng Zheng, Liguo Chen, Qi Tan, Xiaodong Shang, Aimin Ma
Applied Biochemistry and Biotechnology.2014; 174(1): 259. CrossRef - Cloning and characterization of a new manganese superoxide dismutase from deep-sea thermophile Geobacillus sp. EPT3
Yanbing Zhu, Guohong Wang, Hui Ni, Anfeng Xiao, Huinong Cai
World Journal of Microbiology and Biotechnology.2014; 30(4): 1347. CrossRef - A novel mechanism of protein thermostability: a unique N-terminal domain confers heat resistance to Fe/Mn-SODs
Wei Wang, Ting Ma, Baoliang Zhang, Nana Yao, Mingchang Li, Lianlei Cui, Guoqiang Li, Zhenping Ma, Jiansong Cheng
Scientific Reports.2014;[Epub] CrossRef - Purification and biochemical characterization of manganesecontaining superoxide dismutase from deep-sea thermophile Geobacillus sp. EPT3
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Journal Article
- In vitro Activity of Sodium Benzoate Against Clinically Relevant Enterococcus faecalis and Enterococcus faecium Isolates
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Oguz Karabay , Esra Kocoglu , Nevin Ince , Tufan Sahan , Davut Ozdemir
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J. Microbiol. 2006;44(1):129-131.
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DOI: https://doi.org/2325 [pii]
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Abstract
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The antimicrobial effects of sodium benzoate against Enterococcus faecalis and Enterococcus faecium
were investigated. The MIC90 of sodium benzoate were 64 mg/L for E. faecalis and 32 mg/L for E. faecium, while the MBC90 were 128 mg/L and 64mg/L, respectively. Although further studies
are required for clinical evidence, sodium benzoate seems to be effective against Enterococcus spp.
- Increased Activities of SOD and Catalase on Aerobic Growth in Arcobacter nitrofigilis
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Park, Young Bok , han, Yeong Hwan
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J. Microbiol. 1997;35(3):239-240.
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Abstract
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A free-living nitrogen fixing Arcobacter nitrofigilis exhibuted the typical characteristics of aerobic growth in which the maximal cell growth was shown under an ambient air atmospjere, whereas no cell growth was shown umder an anaerobic condition. When oxygen concentration was increased, the activities of SOD and catalase were increased. These suggest that the aerobic nature of A. nitrofigilis might be due to the increased levels of both enzymes that scavenge toxic forms of oxygen.
- Molecular Cloning and Characterization of Mn-Superoxide Dismutase Gene from Candida sp.
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Hong, Yun Mi , Nam, Yong Sik , Choi, Soon Yong
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J. Microbiol. 1997;35(4):309-314.
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Abstract
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The manganese-containing superoxide dismutase (MnSOD) is a major component of the cellular defence mechanisms against the toxic effects of the superoxide radical. Within the framework of studies on oxidative stress=responsible enzymes in the
Candida sp., the gene encoding the MnSOD was isolated and examined in this study. A specific primer was designed based on conserved regions of MnSOD sequences from other organisms, and was used to isolate the gene by PCR on reverse-transcribed Candida poly(A^+) RNA. The PCR product was used to screen a Candida genomic lambda library and the nucleotide wequence of positive clone was determined. The deduced primary sequence encodes a 25kDa protein which has the conserved residues for enzyme activity and metal binding. The 28 N-terminal amino acids encoded by the Candida cDNA comprise a putatice mitochondrial transit peptide. Potential regulatory elements were identified in the 5' flanking sequences. Northern blot analysis showed that the transcription of the MnSOD gene is induced 5-to 10-fold in response to mercury, cadmium ions and hydrogen peroxide.
- Response of CuZnSOD and HP1 conjugated gene in Escherichia coli double mutants to oxidative stress
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Park, Hye Young , Kim, Young Gon
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J. Microbiol. 1998;36(3):171-178.
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Abstract
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In Escherichia coli, the counterbalances between superoxide dismutase (SOD) and hydroperoxidase are more important for overall sensitivity to oxidative stress such as paraquat (PQ, 0.1 mM), H_2O_2 (1mM), CuSO_4(0.1 mM), CuSO_4 and heat shock (37℃→42℃) than the level of either SOD or HP1 alone. To evaluate the relative coordinate defense, E. coli SOD and/or hydroperoxidase double mutants were transformed with plasmids expressing SOD^+HP1^-, SOD^-HP1^+ and SOD^-HP1^-, and their physiological response to oxidative stess was measured. SOD was found to be more important than hydroperoxide in preventing oxygen-mediated stress except for the case of H_2O_2 treatment in the presence of SOD. Nevertheless, a balance between both enzymes are necessary for an effective defense against oxygen mediated radicals. The average ratio of SOD:HP1 on activity of various E. coli strains under oxidative stress except copper sulphate treatment show about 1.4 in the wild type. When the ratio, however, was reversed in mutant cells encoded with Photobactrium leiognathi CuZnSOD gene, their sensitivities were more increased. This suggests that although HP1 could reduce the H_2O_2 or hydroxyl radicals, it also inhibited the SOD function against ixygen radicals.
- Superoxide Dismutase Profiles in the Mesophilic Deinococcus Species
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Young Sun Yun , Young Nam Lee
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J. Microbiol. 2001;39(3):232-235.
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Abstract
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Electrophoretic resolution of superoxide dismutase (SOD) from the highly UV-resistant bacteria, Deinococcus species revealed multiple forms of superoxide dismutases (SODs) in D. radiodurans, D. grandis, and D. proteolyticus, as judged from electrophoretic properties and metal cofactors. A single SOD occurred in both D. radiophilus and D. radiopugnans. Deinococcal SODs were either MnSOD, FeSOD or cambialistic Mn/FeSOD. The unique SOD profile of each mesophilic Deinococcus species, multiplicity and metal cofactors, would be valuable in identifying Deinococcus species.
- Isolation and Characterization of the sod2+ Gene Encoding a Putative Mitochondrial Manganese Superoxide Dismutase in Schizosaccharomyces pombe
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Jae-Hoon Jeong , Eun-Soo Kwon , Jung-Hye Roe
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J. Microbiol. 2001;39(1):37-41.
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Abstract
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The fission yeast Schizosaccharomyces pombe contains two distinct superoxide dismutase (SOD) activities, one in the cytosol encoded by the sod1+ gene and the other in mitochondria. The sod2+ gene encoding putative mitochondrial manganese superoxide dismutase (MnSOD) was isolated from the S. pombe genomic library using a PCR fragment as the probe. The nucleotide sequence of the sod2+ gene and its flanking region (4051 bp HindIII fragment) was determined. An intron of 123 nt in size was predicted and confirmed by sequencing the cDNA following reverse transcription PCR. The predicted Sod2p consists of 218 amino acid residues with a molecular mass of 24,346 Da. The deduced amino acid sequence showed a high degree of homology with other MnSODs, especially in the metal binding residues at the active site and their relative positions. The transcriptional start site was mapped by primer extension at 231 nt upstream from the ATG codon. A putative TATA box (TATAAAA) was located 58 nt upstream from the transcriptional start site and putative polyadenylation sites were located at 1000, 1062, and 1074 nt downstream from the ATG start codon.
- Examination of the Antioxidant Potential of Pycnogenol under Conditions of Oxidative Stress in Escherichia coli Mutants Deficient in HP1 and Superoxide Dismutase Activities
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Jeong A Youm , Young Gon Kim
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J. Microbiol. 2003;41(1):28-33.
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Abstract
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Pycnogenol (PYC) is believed to have potential as a therapeutic agent against free radical-mediated oxidative stress. It is important, therefore, to understand the interactions between PYC and cellular defenses against oxidative stress. Toward this end, we analyzed the survival rates on the gene expression responses of E. coli sod katG mutants to PYC after pre-treatment of PQ or H_2O_2-mediated stress under aerobic conditions. We identified SOD induced by PYC, but not HP1 in sod katG mutants. A striking result was the PYC induction of SOD with antioxidant property in single katG mutant cells, particularly MnSOD and CuZnSOD. These inductions were further increased with oxidative stress, while HP1 was not induced in these conditions. The effects of pycnogenol treatment on these cells depend in part on its concentration on the stress response. Protective effects of PYC exposure which affected gene expression in cells were consistent with cell survival rates. Our results demonstrate that pycnogenol may alter the stress response gene expression in a specific manner such as SoxRS because PYC induction of single mutant only worked under increased PQ stress. All together our data indicate that SOD activity is essential for the cellular defense against PQ-mediated oxidative stress, suggesting that PYC may not be effective as an antioxidant in only oxidative stress conditions. On the other hand, it was expected that PYC may play a role as a pro-oxidant and if it is available for use, it should be evaluated carefully.