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- Tn5 Transposon-based Mutagenesis for Engineering Phage-resistant Strains of Escherichia coli BL21 (DE3)
- Yinfeng Wang , Guanhua Xuan , Houqi Ning , Jiuna Kong , Hong Lin , Jingxue Wang
- J. Microbiol. 2023;61(5):559-569. Published online May 22, 2023
- DOI: https://doi.org/10.1007/s12275-023-00048-2
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Abstract
PDF - Escherichia coli is a preferred strain for recombinant protein production, however, it is often plagued by phage infection during experimental studies and industrial fermentation. While the existing methods of obtaining phage-resistant strains by natural mutation are not efficient enough and time-consuming. Herein, a high-throughput method by combining Tn5 transposon mutation and phage screening was used to produce Escherichia coli BL21 (DE3) phage-resistant strains. Mutant strains PR281-7, PR338-8, PR339-3, PR340-8, and PR347-9 were obtained, and they could effectively resist phage infection. Meanwhile, they had good growth ability, did not contain pseudolysogenic strains, and were controllable. The resultant phage-resistant strains maintained the capabilities of producing recombinant proteins since no difference in mCherry red fluorescent protein expression was found in phage-resistant strains. Comparative genomics showed that PR281-7, PR338-8, PR339-3, and PR340-8 mutated in ecpE, nohD, nrdR, and livM genes, respectively. In this work, a strategy was successfully developed to obtain phage-resistant strains with excellent protein expression characteristics by Tn5 transposon mutation. This study provides a new reference to solve the phage contamination problem.
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- Establishment and improvement of genetic manipulation tools for Fusobacterium nucleatum
Zhiwei Guan, Hailong Wang, Qiang Feng
Engineering Microbiology.2025; 5(1): 100192. CrossRef - Antiviral effects of heme oxygenase-1 against canine coronavirus and canine influenza virus in vitro
Jae-Hyeong Kim, Dong-Hwi Kim, Kyu-Beom Lim, Joong-Bok Lee, Seung-Yong Park, Chang-Seon Song, Sang-Won Lee, Dong-Hun Lee, Do-Geun Kim, Hun-Young Yoon, In-Soo Choi
Journal of Microbiology.2025; 63(5): e2501029. CrossRef
- Establishment and improvement of genetic manipulation tools for Fusobacterium nucleatum
- Devosia rhizoryzae sp. nov., and Devosia oryziradicis sp. nov., novel plant growth promoting members of the genus Devosia, isolated from the rhizosphere of rice plants
- Geeta Chhetri , Inhyup Kim , Minchung Kang , Jiyoun Kim , Yoonseop So , Taegun Seo
- J. Microbiol. 2022;60(1):1-10. Published online November 26, 2021
- DOI: https://doi.org/10.1007/s12275-022-1474-8
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- 42 Web of Science
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Abstract
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- Two novel Gram-negative, aerobic, asporogenous, motile, rodshaped, orange and white pigmented, designated as LEGU1T and G19T, were isolated from the roots of rice plants, collected from Goyang, South Korea. Phylogenetic analysis based on their 16S rRNA gene sequences revealed that they belonged to the genus Devosia and formed a different lineage and clusters with different members of the genus Devosia. These strains shared common chemotaxonomic features. In particular, they had Q-10 as the sole quinone, phosphatidylglycerol, diphosphatidylglycerol as the principal polar lipids and C16:0, C18:1 ω7c 11-methyl and summed feature 8 (comprising C18:1 ω7c/ C18:1 ω6c) as the main fatty acids. The draft genome sequences of strains LEGU1T and G19T were 3,524,978 and 3,495,520 bp in size, respectively. Their average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) values were 72.8–81.9% and 18.7–25.1%, respectively, with each other and type strains of related species belonging to the genus Devosia, suggesting that these two strains represent novel species. The G + C content of strains LEGU1T and G19T were 62.1 and 63.8%, respectively. Of the two strains, only LEGU1T produced carotenoid and flexirubin-type pigment. Both strains produced siderophore and indole acetic acid (IAA) in the presence of L-tryptophan. Siderophore biosynthesis genes, auxin responsive genes and tryptophan biosynthesis genes were present in their genomes. The present study aimed to determine the detailed taxonomic positions of the strains using the modern polyphasic approach. Based on the results of polyphasic analysis, these strains are suggested to be two novel bacterial species within the genus Devosia. The proposed names are D. rhizoryzae sp. nov., and Devosia oryziradicis sp. nov., respectively. The plant growth promoting effects of these strains suggest that they can be exploited to improve rice crop productivity. The type strain of D. rhizoryzae is LEGU1T (KCTC 82712T = NBRC 114485T) and D. oryziradicis is G19T (KCTC 82688T = NBRC 114842T).
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Citations
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Research Support, Non-U.S. Gov't
- Bacterial Endophyte Sphingomonas sp. LK11 Produces Gibberellins and IAA and Promotes Tomato Plant Growth
- Abdul Latif Khan , Muhammad Waqas , Sang-Mo Kang , Ahmed Al-Harrasi , Javid Hussain , Ahmed Al-Rawahi , Salima Al-Khiziri , Ihsan Ullah , Liaqat Ali , Hee-Young Jung , In-Jung Lee
- J. Microbiol. 2014;52(8):689-695. Published online July 4, 2014
- DOI: https://doi.org/10.1007/s12275-014-4002-7
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Abstract
PDF
- Plant growth promoting endophytic bacteria have been identified as potential growth regulators of crops. Endophytic bacterium, Sphingomonas sp. LK11, was isolated from the leaves of Tephrosia apollinea. The pure culture of Sphingomonas sp. LK11 was subjected to advance chromatographic and spectroscopic techniques to extract and isolate gibberellins (GAs). Deuterated standards of [17, 17-2H2]-GA4, [17, 17-2H2]-GA9 and [17, 17-2H2]-GA20 were used to quantify the bacterial GAs. The analysis of the culture broth of Sphingomonas sp. LK11 revealed the existence of physiologically active gibberellins (GA4: 2.97 ± 0.11 ng/ml) and inactive GA9 (0.98 ± 0.15 ng/ml) and GA20 (2.41 ± 0.23). The endophyte also produced indole acetic acid (11.23 ± 0.93 μM/ml). Tomato plants inoculated with endophytic Sphingomonas sp. LK11 showed significantly increased growth attributes (shoot length, chlorophyll contents, shoot, and root dry weights) compared to the control. This indicated that such phyto-hormones-producing strains could help in increasing crop growth.
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International Journal of Molecular Sciences.2023; 24(3): 2174. CrossRef - Effect of Arbuscular mycorrhizal fungi (AMF) inoculation on endophytic bacteria of lettuce
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Applied Biochemistry and Microbiology.2023; 59(1): 14. CrossRef - Biochemical Characterization and Potential of Bacillus safensis Strain SCAL1 to Mitigate Heat Stress in Solanum lycopersicum L.
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Applied Soil Ecology.2023; 185: 104801. CrossRef - Sphingomonas sediminicola Is an Endosymbiotic Bacterium Able to Induce the Formation of Root Nodules in Pea (Pisum sativum L.) and to Enhance Plant Biomass Production
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Jurnal Ilmu Pertanian Indonesia.2023; 28(3): 352. CrossRef - Enhancement of humic acid on plant growth in a Cd-contaminated matrix: performance, kinetics, and mechanism
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Frontiers in Plant Science.2023;[Epub] CrossRef - Sphingomonas sediminicola Dae20 Is a Highly Promising Beneficial Bacteria for Crop Biostimulation Due to Its Positive Effects on Plant Growth and Development
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Frontiers in Sustainable Food Systems.2023;[Epub] CrossRef - New Sulfur-Containing Diketopiperazine from Marine-Derived Bacteria Streptomyces rochei sp. 81 with Potent Carbonic Anhydrase II Inhibition
Ahmed N. Al-Rawahi, Raeid M. M. Abed, Najeeb Ur Rehman, Kashif Rafiq, Ajmal Khan, Abdul L. Khan, Majid Khan, Sobia Ahsan Halim, Fahad Al-Senafi, Huda Mahmoud, Ahmed Al-Harrasi
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Frontiers in Microbiology.2023;[Epub] CrossRef - Exopolysaccharide-producing bacteria enhanced Pb immobilization and influenced the microbiome composition in rhizosphere soil of pakchoi (Brassica chinensis L.)
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Archives of Microbiology.2023;[Epub] CrossRef - The rootstock shape microbial diversity and functionality in the rhizosphere of Vitis vinifera L. cultivar Falanghina
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Frontiers in Plant Science.2023;[Epub] CrossRef - The phytomicrobiome: solving plant stress tolerance under climate change
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Frontiers in Plant Science.2023;[Epub] CrossRef - Cadmium toxicity impacts plant growth and plant remediation strategies
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Frontiers in Microbiology.2023;[Epub] CrossRef - Microbiome analysis revealed distinct microbial communities occupying different sized nodules in field-grown peanut
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Biocatalysis and Agricultural Biotechnology.2020; 30: 101842. CrossRef - Plant growth‐promoting endophytic bacteria augment growth and salinity tolerance in rice plants
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Plant Biology.2020; 22(5): 850. CrossRef - Early blight suppression and plant growth promotion potential of the endophyte Aspergillus flavus in tomato plant
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Annals of Agricultural Sciences.2020; 65(2): 117. CrossRef - Wheat dwarfing influences selection of the rhizosphere microbiome
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Scientific Reports.2020;[Epub] CrossRef - Two-year study of biochar: Achieving excellent capability of potassium supply via alter clay mineral composition and potassium-dissolving bacteria activity
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Science of The Total Environment.2020; 717: 137286. CrossRef - Culture-Dependent and Culture-Independent Characterization of the Olive Xylem Microbiota: Effect of Sap Extraction Methods
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Frontiers in Plant Science.2020;[Epub] CrossRef - Methylobacterium, a major component of the culturable bacterial endophyte community of wild Brassica seed
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Canadian Journal of Microbiology.2020; 66(8): 457. CrossRef - Treatments with native Coleus forskohlii endophytes improve fitness and secondary metabolite production of some medicinal and aromatic plants
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International Microbiology.2020; 23(2): 345. CrossRef - Effects of Depolymerized Gellan with Different Molecular Weights on the Growth of Four Bedding Plant Species
Piotr Salachna
Agronomy.2020; 10(2): 169. CrossRef - Role of Microorganisms in the Remediation of Wastewater in Floating Treatment Wetlands: A Review
Munazzam Jawad Shahid, Ameena A. AL-surhanee, Fayza Kouadri, Shafaqat Ali, Neeha Nawaz, Muhammad Afzal, Muhammad Rizwan, Basharat Ali, Mona H. Soliman
Sustainability.2020; 12(14): 5559. CrossRef - Interkingdom signaling in plant-rhizomicrobiome interactions for sustainable agriculture
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Microbiological Research.2020; 241: 126589. CrossRef - Effect of the endophytic plant growth promoting Enterobacter ludwigii EB4B on tomato growth
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Hellenic Plant Protection Journal.2020; 13(2): 54. CrossRef - Biocontrol of Bacterial Wilt Disease Through Complex Interaction Between Tomato Plant, Antagonists, the Indigenous Rhizosphere Microbiota, and Ralstonia solanacearum
Tarek R. Elsayed, Samuel Jacquiod, Eman H. Nour, Søren J. Sørensen, Kornelia Smalla
Frontiers in Microbiology.2020;[Epub] CrossRef - Exploring the Microbiota of East African Indigenous Leafy Greens for Plant Growth, Health, and Resilience
Julian Taffner, Olivia Laggner, Adrian Wolfgang, Danny Coyne, Gabriele Berg
Frontiers in Microbiology.2020;[Epub] CrossRef - Elucidating Mechanisms of Endophytes Used in Plant Protection and Other Bioactivities With Multifunctional Prospects
Ayomide Emmanuel Fadiji, Olubukola Oluranti Babalola
Frontiers in Bioengineering and Biotechnology.2020;[Epub] CrossRef - Complete Genome Sequence of Pseudomonas psychrotolerans CS51, a Plant Growth-Promoting Bacterium, Under Heavy Metal Stress Conditions
Sang-Mo Kang, Sajjad Asaf, Abdul Latif Khan, Lubna, Adil Khan, Bong-Gyu Mun, Muhammad Aaqil Khan, Humaira Gul, In-Jung Lee
Microorganisms.2020; 8(3): 382. CrossRef - Sphingomonas: from diversity and genomics to functional role in environmental remediation and plant growth
Sajjad Asaf, Muhammad Numan, Abdul Latif Khan, Ahmed Al-Harrasi
Critical Reviews in Biotechnology.2020; 40(2): 138. CrossRef - Application of Transposon Insertion Sequencing to Agricultural Science
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Frontiers in Plant Science.2020;[Epub] CrossRef - Effect of Applying Struvite and Organic N as Recovered Fertilizers on the Rhizosphere Dynamics and Cultivation of Lupine (Lupinus angustifolius)
Ana A. Robles-Aguilar, Oliver Grunert, Emma Hernandez-Sanabria, Mohamed Mysara, Erik Meers, Nico Boon, Nicolai D. Jablonowski
Frontiers in Plant Science.2020;[Epub] CrossRef - Poly-γ-glutamic acid-producing bacteria reduced Cd uptake and effected the rhizosphere microbial communities of lettuce
Xiaohan Wang, Geyu Dong, Xingwang Liu, Shengkui Zhang, Can Li, Xianqin Lu, Tao Xia
Journal of Hazardous Materials.2020; 398: 123146. CrossRef - Sphingomonas hominis sp. nov., isolated from hair of a 21-year-old girl
Dao-Feng Zhang, Xi-Wen Cui, Zhe Zhao, Ai-Hua Zhang, Jian-Ke Huang, Wen-Jun Li
Antonie van Leeuwenhoek.2020; 113(10): 1523. CrossRef - Fungal and Bacterial Microbiome Associated with the Rhizosphere of Native Plants from the Atacama Desert
Alejandra Fuentes, Héctor Herrera, Trevor C. Charles, Cesar Arriagada
Microorganisms.2020; 8(2): 209. CrossRef - Extending thermotolerance to tomato seedlings by inoculation with SA1 isolate of Bacillus cereus and comparison with exogenous humic acid application
Muhammad Aaqil Khan, Sajjad Asaf, Abdul Latif Khan, Rahmatullah Jan, Sang-Mo Kang, Kyung-Min Kim, In-Jung Lee, Haitao Shi
PLOS ONE.2020; 15(4): e0232228. CrossRef - Complete genome sequence of Sphingomonas sp. Cra20, a drought resistant and plant growth promoting rhizobacteria
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Genomics.2020; 112(5): 3648. CrossRef - Leaf-associated microbiomes of grafted tomato plants
Hirokazu Toju, Koji Okayasu, Michitaka Notaguchi
Scientific Reports.2019;[Epub] CrossRef - Endophytic bacterial communities of Jingbai Pear trees in north China analyzed with Illumina sequencing of 16S rDNA
Fei Ren, Wei Dong, Dong-Hui Yan
Archives of Microbiology.2019; 201(2): 199. CrossRef - Alleviation of salt stress response in soybean plants with the endophytic bacterial isolate Curtobacterium sp. SAK1
Muhammad Aaqil Khan, Sajjad Asaf, Abdul Latif Khan, Ihsan Ullah, Sajid Ali, Sang-Mo Kang, In-Jung Lee
Annals of Microbiology.2019; 69(8): 797. CrossRef - Endophytic Bacteria in Plant Salt Stress Tolerance: Current and Future Prospects
Anukool Vaishnav, Awadhesh K. Shukla, Anjney Sharma, Roshan Kumar, Devendra K. Choudhary
Journal of Plant Growth Regulation.2019; 38(2): 650. CrossRef - Metal Resistant Endophytic Bacteria Reduces Cadmium, Nickel Toxicity, and Enhances Expression of Metal Stress Related Genes with Improved Growth of Oryza Sativa, via Regulating Its Antioxidant Machinery and Endogenous Hormones
Rahmatullah Jan, Muhammad Aaqil Khan, Sajjad Asaf, Lubna, In-Jung Lee, Kyung Min Kim
Plants.2019; 8(10): 363. CrossRef - Integrated phytohormone production by the plant growth-promoting rhizobacterium Bacillus tequilensis SSB07 induced thermotolerance in soybean
Sang-Mo Kang, Abdul Latif Khan, Muhammad Waqas, Sajjad Asaf, Ko-Eun Lee, Yeon-Gyeong Park, Ah-Yeong Kim, Muhammad Aaqil Khan, Young-Hyun You, In-Jung Lee
Journal of Plant Interactions.2019; 14(1): 416. CrossRef - Sphingomonas sp. Cra20 Increases Plant Growth Rate and Alters Rhizosphere Microbial Community Structure of Arabidopsis thaliana Under Drought Stress
Yang Luo, Fang Wang, Yaolong Huang, Meng Zhou, Jiangli Gao, Taozhe Yan, Hongmei Sheng, Lizhe An
Frontiers in Microbiology.2019;[Epub] CrossRef - Diversity, distribution and multi‐functional attributes of bacterial communities associated with the rhizosphere and endosphere of timothy (Phleum pratenseL.)
D. Saleh, J. Jarry, M. Rani, K.A. Aliferis, P. Seguin, S.H. Jabaji
Journal of Applied Microbiology.2019; 127(3): 794. CrossRef - Halo-tolerant rhizospheric Arthrobacter woluwensis AK1 mitigates salt stress and induces physio-hormonal changes and expression of GmST1 and GmLAX3 in soybean
Muhammad Aaqil Khan, Ihsan Ullah, Muhammad Waqas, Muhammad Hamayun, Abdul Latif Khan, Sajjad Asaf, Sang-Mo Kang, Kyung-Min Kim, Rahmatullah Jan, In-Jung Lee
Symbiosis.2019; 77(1): 9. CrossRef - Drought tolerance improvement in plants: an endophytic bacterial approach
Abid Ullah, Mohammad Nisar, Hazrat Ali, Ali Hazrat, Kashif Hayat, Ayaz Ali Keerio, Muhammad Ihsan, Muhammad Laiq, Sana Ullah, Shah Fahad, Aziz Khan, Aamir Hamid Khan, Adnan Akbar, Xiyan Yang
Applied Microbiology and Biotechnology.2019; 103(18): 7385. CrossRef - Fumigation coupled with bio-organic fertilizer for the suppression of watermelon Fusarium wilt disease re-shapes the soil microbiome
Chao Xue, Zongzhuan Shen, Yuewen Hao, Sitian Yu, Yuchan Li, Weijie Huang, Yao Chong, Wei Ran, Rong Li, Qirong Shen
Applied Soil Ecology.2019; 140: 49. CrossRef - Effect of the inoculation of plant growth-promoting rhizobacteria on the photosynthetic characteristics of Sambucus williamsii Hance container seedlings under drought stress
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AMB Express.2019;[Epub] CrossRef - Beneficial and Pathogenic Arabidopsis Root-Interacting Fungi Differently Affect Auxin Levels and Responsive Genes During Early Infection
Anja K. Meents, Alexandra C. U. Furch, Marília Almeida-Trapp, Sedef Özyürek, Sandra S. Scholz, Alexander Kirbis, Teresa Lenser, Günter Theißen, Veit Grabe, Bill Hansson, Axel Mithöfer, Ralf Oelmüller
Frontiers in Microbiology.2019;[Epub] CrossRef - Synthesis of Biologically Active Gibberellins GA4 and GA7 by Microorganisms
T.P. Pirog, D.V. Havrylkina, N.O. Leonova, T.A. Shevchuk, G.O. Iutynska
Mikrobiolohichnyi Zhurnal.2019; 81(2): 90. CrossRef - Effect of Long-Term Farming Practices on Agricultural Soil Microbiome Members Represented by Metagenomically Assembled Genomes (MAGs) and Their Predicted Plant-Beneficial Genes
Johanna Nelkner, Christian Henke, Timo Wentong Lin, Wiebke Pätzold, Julia Hassa, Sebastian Jaenicke, Rita Grosch, Alfred Pühler, Alexander Sczyrba, Andreas Schlüter
Genes.2019; 10(6): 424. CrossRef - Paenibacillusstrains with nitrogen fixation and multiple beneficial properties for promoting plant growth
Xiaomeng Liu, Qin Li, Yongbin Li, Guohua Guan, Sanfeng Chen
PeerJ.2019; 7: e7445. CrossRef - Diversity and Functionality of Culturable Endophytic Bacterial Communities in Chickpea Plants
Clarisse Brígido, Sakshi Singh, Esther Menéndez, Maria Tavares, Bernard Glick, Maria Félix, Solange Oliveira, Mário Carvalho
Plants.2019; 8(2): 42. CrossRef -
Draft Genome Sequence of the UV-Resistant Antarctic Bacterium
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Microbiology Resource Announcements.2019;[Epub] CrossRef - Bitki Probiyotik Bakteriler: Bitkiler Üzerindeki Rolleri ve Uygulamalar
Çiğdem KÜÇÜK
International Journal of Life Sciences and Biotechnology.2019; 2(1): 1. CrossRef - Decoding Wheat Endosphere–Rhizosphere Microbiomes in Rhizoctonia solani–Infested Soils Challenged by Streptomyces Biocontrol Agents
Ricardo Araujo, Christopher Dunlap, Steve Barnett, Christopher M.M. Franco
Frontiers in Plant Science.2019;[Epub] CrossRef - Pre-colonization of PGPR triggers rhizosphere microbiota succession associated with crop yield enhancement
Yang Zhang, Xu Gao, Zongzhuan Shen, Chengzhi Zhu, Zixuan Jiao, Rong Li, Qirong Shen
Plant and Soil.2019; 439(1-2): 553. CrossRef - Biotransformation of benzoin by Sphingomonas sp. LK11 and ameliorative effects on growth of Cucumis sativus
Amjad Ali, Tapan Kumar Mohanta, Sajjad Asaf, Najeebur Rehman, Saif Al-Housni, Ahmed Al-Harrasi, Abdul Latif Khan, Ahmed Al-Rawahi
Archives of Microbiology.2019; 201(5): 591. CrossRef - Comparison of Microbial Community of Rhizosphere and Endosphere in Kiwifruit
Min-Jung Kim, Heeil Do, Gyeongjun Cho, Rae-Dong Jeong, Youn-Sig Kwak
The Plant Pathology Journal.2019; 35(6): 705. CrossRef - Tomato plants rather than fertilizers drive microbial community structure in horticultural growing media
Oliver Grunert, Ana A. Robles-Aguilar, Emma Hernandez-Sanabria, Silvia D. Schrey, Dirk Reheul, Marie-Christine Van Labeke, Siegfried E. Vlaeminck, Tom G. L. Vandekerckhove, Mohamed Mysara, Pieter Monsieurs, Vicky M. Temperton, Nico Boon, Nicolai D. Jablon
Scientific Reports.2019;[Epub] CrossRef - The Xylella fastidiosa-Resistant Olive Cultivar “Leccino” Has Stable Endophytic Microbiota during the Olive Quick Decline Syndrome (OQDS)
Marzia Vergine, Joana B. Meyer, Massimiliano Cardinale, Erika Sabella, Martin Hartmann, Paolo Cherubini, Luigi De Bellis, Andrea Luvisi
Pathogens.2019; 9(1): 35. CrossRef - Prospecting endophytes from different Fe or Zn accumulating wheat genotypes for their influence as inoculants on plant growth, yield, and micronutrient content
Devendra Singh, Neelam Geat, Mahendra Vikram Singh Rajawat, Radha Prasanna, Abhijit Kar, Anju Mahendru Singh, Anil Kumar Saxena
Annals of Microbiology.2018; 68(12): 815. CrossRef - Interspecific Plant Interactions Reflected in Soil Bacterial Community Structure and Nitrogen Cycling in Primary Succession
Joseph E. Knelman, Emily B. Graham, Janet S. Prevéy, Michael S. Robeson, Patrick Kelly, Eran Hood, Steve K. Schmidt
Frontiers in Microbiology.2018;[Epub] CrossRef - Mechanisms of Cr(VI) resistance by endophytic Sphingomonas sp. LK11 and its Cr(VI) phytotoxic mitigating effects in soybean (Glycine max L.)
Saqib Bilal, Abdul Latif Khan, Raheem Shahzad, Yoon-Ha Kim, Muhammad Imran, Muhammad Jamil Khan, Ahmed Al-Harrasi, Tae Han Kim, In-Jung Lee
Ecotoxicology and Environmental Safety.2018; 164: 648. CrossRef - The Green Roof Microbiome: Improving Plant Survival for Ecosystem Service Delivery
Roberta Fulthorpe, J. Scott MacIvor, Pu Jia, Simone-Louise E. Yasui
Frontiers in Ecology and Evolution.2018;[Epub] CrossRef - Endophytic Microbial Consortia of Phytohormones-Producing Fungus Paecilomyces formosus LHL10 and Bacteria Sphingomonas sp. LK11 to Glycine max L. Regulates Physio-hormonal Changes to Attenuate Aluminum and Zinc Stresses
Saqib Bilal, Raheem Shahzad, Abdul L. Khan, Sang-Mo Kang, Qari M. Imran, Ahmed Al-Harrasi, Byung-Wook Yun, In-Jung Lee
Frontiers in Plant Science.2018;[Epub] CrossRef - Cultivated bacterial diversity associated with the carnivorous plant Utricularia breviscapa (Lentibulariaceae) from floodplains in Brazil
Felipe Rezende Lima, Almir José Ferreira, Cristine Gobbo Menezes, Vitor Fernandes Oliveira Miranda, Manuella Nóbrega Dourado, Welington Luiz Araújo
Brazilian Journal of Microbiology.2018; 49(4): 714. CrossRef - Variations in total phenolics and antioxidant enzymes cause phenotypic variability and differential resistant response in tomato genotypes against early blight disease
Zoia Arshad Awan, Amna Shoaib, Kashif Ali Khan
Scientia Horticulturae.2018; 239: 216. CrossRef - Complete genome sequencing and analysis of endophytic Sphingomonas sp. LK11 and its potential in plant growth
Sajjad Asaf, Abdul Latif Khan, Muhammad Aaqil Khan, Ahmed Al-Harrasi, In-Jung Lee
3 Biotech.2018;[Epub] CrossRef - Bacterial community structure associated with the rhizosphere soils and roots of Stellera chamaejasme L. along a Tibetan elevation gradient
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Annals of Microbiology.2018; 68(5): 273. CrossRef - Synergistic plant–microbe interactions between endophytic bacterial communities and the medicinal plant Glycyrrhiza uralensis F.
Li Li, Osama Abdalla Abdelshafy Mohamad, Jinbiao Ma, Ariel D. Friel, Yangui Su, Yun Wang, Zulpiya Musa, Yonghong Liu, Brian P. Hedlund, Wenjun Li
Antonie van Leeuwenhoek.2018; 111(10): 1735. CrossRef - How Does Salinity Shape Bacterial and Fungal Microbiomes of Alnus glutinosa Roots?
Dominika Thiem, Marcin Gołębiewski, Piotr Hulisz, Agnieszka Piernik, Katarzyna Hrynkiewicz
Frontiers in Microbiology.2018;[Epub] CrossRef - Gibberellin biosynthesis and metabolism: A convergent route for plants, fungi and bacteria
Sonia Salazar-Cerezo, Nancy Martínez-Montiel, Jenny García-Sánchez, Rocío Pérez-y-Terrón, Rebeca D. Martínez-Contreras
Microbiological Research.2018; 208: 85. CrossRef - Antibacterial activity of endophytic fungi from the medicinal plant Uncaria tomentosa (Willd.) DC
Asfury Rodrigues Rodrigo, Vasconcelos de Araujo Atilon, Moura da Cunha Renildo, Maia Carvalho Clarice
Journal of Medicinal Plants Research.2018; 12(15): 179. CrossRef - Isolation and Identification of Bacterial Endophytes from Grasses along the Oregon Coast
James E. Dombrowski, Vicky G. Hollenbeck, Ruth C. Martin
American Journal of Plant Sciences.2017; 08(03): 574. CrossRef - Bacillus amyloliquefaciens BSL16 improves phytoremediation potential of Solanum lycopersicum during copper stress
Abdul Latif Khan, Saqib Bilal, Boshra Ahmed Halo, Ahmed Al-Harrasi, Abdur Rahim Khan, Muhammad Waqas, Ghanim Salim Al-Thani, Issa Al-Amri, Ahmed Al-Rawahi, In-Jung Lee
Journal of Plant Interactions.2017; 12(1): 550. CrossRef - Osmoprotective functions conferred to soybean plants via inoculation with Sphingomonas sp. LK11 and exogenous trehalose
Sajjad Asaf, Abdul Latif Khan, Muhammad Aaqil Khan, Qari Muhammad Imran, Byung-Wook Yun, In-Jung Lee
Microbiological Research.2017; 205: 135. CrossRef - Beneficial traits of bacterial endophytes belonging to the core communities of the tomato root microbiome
Baoyu Tian, Cuijuan Zhang, Yuan Ye, Jiaming Wen, Yimin Wu, Hongzhu Wang, Huimin Li, Shixian Cai, Weiting Cai, Zhiqiang Cheng, Shaonan Lei, Rongqin Ma, Chaojun Lu, Yi Cao, Xiaohong Xu, Keqin Zhang
Agriculture, Ecosystems & Environment.2017; 247: 149. CrossRef - Endophytic bacterial diversity of Avicennia marina helps to confer resistance against salinity stress in Solanum lycopersicum
Amjad Ali, Raheem Shahzad, Abdul Latif Khan, Boshera A. Halo, Rashid Al-Yahyai, Ahmed Al-Harrasi, Ahmed Al-Rawahi, In-Jung Lee
Journal of Plant Interactions.2017; 12(1): 312. CrossRef - Bottlenecks in commercialisation and future prospects of PGPR
Bushra Tabassum, Anwar Khan, Muhammad Tariq, Memoona Ramzan, Muhammad Saleem Iqbal Khan, Naila Shahid, Khadija Aaliya
Applied Soil Ecology.2017; 121: 102. CrossRef - The Effects of the Endophytic Bacterium Pseudomonas fluorescens Sasm05 and IAA on the Plant Growth and Cadmium Uptake of Sedum alfredii Hance
Bao Chen, Sha Luo, Yingjie Wu, Jiayuan Ye, Qiong Wang, Xiaomeng Xu, Fengshan Pan, Kiran Y. Khan, Ying Feng, Xiaoe Yang
Frontiers in Microbiology.2017;[Epub] CrossRef - Bacterial endophytes from arid land plants regulate endogenous hormone content and promote growth in crop plants: an example of Sphingomonas sp. and Serratia marcescens
Sajjad Asaf, Muhammad Aaqil Khan, Abdul Latif Khan, Muhammad Waqas, Raheem Shahzad, Ah-Yeong Kim, Sang-Mo Kang, In-Jung Lee
Journal of Plant Interactions.2017; 12(1): 31. CrossRef - Isolation and characterization of a novel silicate-solubilizing bacterial strainBurkholderia eburneaCS4-2 that promotes growth of japonica rice (Oryza sativaL. cv. Dongjin)
Sang-Mo Kang, Muhammad Waqas, Raheem Shahzad, Young-Hyun You, Sajjad Asaf, Muhammad Aaqil Khan, Ko-Eun Lee, Gil-Jae Joo, Sang-Jun Kim, In-Jung Lee
Soil Science and Plant Nutrition.2017; : 1. CrossRef - Diverse culturable diazotrophic endophytic bacteria from Poaceae plants show cross-colonization and plant growth promotion in wheat
Janki K. Patel, G. Archana
Plant and Soil.2017; 417(1-2): 99. CrossRef - Phylloplane bacteria of Jatropha curcas: diversity, metabolic characteristics, and growth-promoting attributes towards vigor of maize seedling
Garima Dubey, Bharati Kollah, Usha Ahirwar, Asit Mandal, Jyoti Kumar Thakur, Ashok Kumar Patra, Santosh Ranjan Mohanty
Canadian Journal of Microbiology.2017; 63(10): 822. CrossRef - Comparison of Prokaryotic and Eukaryotic Communities in Soil Samples with and without Tomato Bacterial Wilt Collected from Different Fields
Chol Gyu Lee, Toshiya Iida, Yohei Uwagaki, Yoko Otani, Kazuhiro Nakaho, Moriya Ohkuma
Microbes and environments.2017; 32(4): 376. CrossRef - Inner Plant Values: Diversity, Colonization and Benefits from Endophytic Bacteria
Hongwei Liu, Lilia C. Carvalhais, Mark Crawford, Eugenie Singh, Paul G. Dennis, Corné M. J. Pieterse, Peer M. Schenk
Frontiers in Microbiology.2017;[Epub] CrossRef - Plant growth-promoting endophyte Sphingomonas sp. LK11 alleviates salinity stress in Solanum pimpinellifolium
Abdul Latif Khan, Muhammad Waqas, Sajjad Asaf, Muhammad Kamran, Raheem Shahzad, Saqib Bilal, Muhammad Aaqil Khan, Sang-Mo Kang, Yoon-Ha Kim, Byung-Wook Yun, Ahmed Al-Rawahi, Ahmed Al-Harrasi, In-Jung Lee
Environmental and Experimental Botany.2017; 133: 58. CrossRef - Effect of GFP-tagging on nitrogen fixation and plant growth promotion of an endophytic diazotrophic strain ofPaenibacillus polymyxa
Kiran Preet Padda, Akshit Puri, Qingwei Zeng, Chris P. Chanway, Xiaoqin Wu
Botany.2017; 95(9): 933. CrossRef - Biofertilizers: a potential approach for sustainable agriculture development
Trishna Mahanty, Surajit Bhattacharjee, Madhurankhi Goswami, Purnita Bhattacharyya, Bannhi Das, Abhrajyoti Ghosh, Prosun Tribedi
Environmental Science and Pollution Research.2017; 24(4): 3315. CrossRef - Endophytes of Jatropha curcas promote growth of maize
Santosh Ranjan Mohanty, Garima Dubey, Bharati Kollah
Rhizosphere.2017; 3: 20. CrossRef - Colonization and Maize Growth Promotion Induced by Phosphate Solubilizing Bacterial Isolates
Yongbin Li, Xiaomeng Liu, Tianyi Hao, Sanfeng Chen
International Journal of Molecular Sciences.2017; 18(7): 1253. CrossRef - Regulations of essential amino acids and proteomics of bacterial endophytes Sphingomonas sp. Lk11 during cadmium uptake
Abdul Latif Khan, Ihsan Ullah, Javid Hussain, Sang‐Mo Kang, Ahmed Al‐Harrasi, Ahmed Al‐Rawahi, In‐Jung Lee
Environmental Toxicology.2016; 31(7): 887. CrossRef - Native Phytoremediation Potential of Urtica dioica for Removal of PCBs and Heavy Metals Can Be Improved by Genetic Manipulations Using Constitutive CaMV 35S Promoter
Jitka Viktorova, Zuzana Jandova, Michaela Madlenakova, Petra Prouzova, Vilem Bartunek, Blanka Vrchotova, Petra Lovecka, Lucie Musilova, Tomas Macek, Pankaj Kumar Arora
PLOS ONE.2016; 11(12): e0167927. CrossRef - The biosynthesis of gibberellic acids by the transformants of orchid-associated Fusarium oxysporum
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Mycological Progress.2016;[Epub] CrossRef - Dendrobium nobile Lindl. seed germination in co-cultures with diverse associated bacteria
Elena A. Tsavkelova, Maria A. Egorova, Maria R. Leontieva, Sophie G. Malakho, Galina L. Kolomeitseva, Alexander I. Netrusov
Plant Growth Regulation.2016; 80(1): 79. CrossRef - Diversity of indigenous endophytic bacteria associated with the roots of Chinese cabbage (Brassica campestris L.) cultivars and their antagonism towards pathogens
Md. Azizul Haque, Han Dae Yun, Kye Man Cho
Journal of Microbiology.2016; 54(5): 353. CrossRef - Plant growth-promoting effects of rhizospheric and endophytic bacteria associated with different tomato cultivars and new tomato hybrids
Gennaro Roberto Abbamondi, Giuseppina Tommonaro, Nele Weyens, Sofie Thijs, Wouter Sillen, Panagiotis Gkorezis, Carmine Iodice, Wesley de Melo Rangel, Barbara Nicolaus, Jaco Vangronsveld
Chemical and Biological Technologies in Agriculture.2016;[Epub] CrossRef - A Complex Molecular Interplay of Auxin and Ethylene Signaling Pathways Is Involved in Arabidopsis Growth Promotion by Burkholderia phytofirmans PsJN
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Frontiers in Plant Science.2016;[Epub] CrossRef - Crop management as a driving force of plant growth promoting rhizobacteria physiology
Juliana Melo, Manuela Carolino, Luís Carvalho, Patrícia Correia, Rogério Tenreiro, Sandra Chaves, Ana I. Meleiro, Sávio B. de Souza, Teresa Dias, Cristina Cruz, Alessandro C. Ramos
SpringerPlus.2016;[Epub] CrossRef - Culturable endophytic bacteria associated with medicinal plant Ferula songorica: molecular phylogeny, distribution and screening for industrially important traits
Yong-Hong Liu, Jian-Wei Guo, Nimaichand Salam, Li Li, Yong-Guang Zhang, Jian Han, Osama Abdalla Mohamad, Wen-Jun Li
3 Biotech.2016;[Epub] CrossRef - Role of Plant Growth Promoting Rhizobacteria in Agricultural Sustainability—A Review
Pravin Vejan, Rosazlin Abdullah, Tumirah Khadiran, Salmah Ismail, Amru Nasrulhaq Boyce
Molecules.2016; 21(5): 573. CrossRef - Response of leaf endophytic bacterial community to elevated CO2 at different growth stages of rice plant
Gaidi Ren, Huayong Zhang, Xiangui Lin, Jianguo Zhu, Zhongjun Jia
Frontiers in Microbiology.2015;[Epub] CrossRef - Diversity and distribution of endophytic bacterial community in the Noni (Morinda citrifolia L.) plant
Liu Yang, Li Yinhu, Yao Su, Wang Hui, Cao Yanhua, Li Jie, Bai Feirong, Qiu Chuangzhao, Feng Xin, Dai Wenkui, Cheng Chi
African Journal of Microbiology Research.2015; 9(25): 1649. CrossRef - Indole: a signaling molecule or a mere metabolic byproduct that alters bacterial physiology at a high concentration?
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Journal of Microbiology.2015; 53(7): 421. CrossRef - Endophytic bacteria (Sphingomonassp. LK11) and gibberellin can improveSolanum lycopersicumgrowth and oxidative stress under salinity
Boshra Ahmed Halo, Abdul Latif Khan, Muhammad Waqas, Ahmed Al-Harrasi, Javid Hussain, Liaqat Ali, Muhammad Adnan, In-Jung Lee
Journal of Plant Interactions.2015; 10(1): 117. CrossRef
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