Skip Navigation
Skip to contents

Journal of Microbiology : Journal of Microbiology

OPEN ACCESS
SEARCH
Search

Search

Page Path
HOME > Search
1 "microbial identification"
Filter
Filter
Article category
Keywords
Publication year
Review
MINIREVIEW] Rapid and robust MALDI-TOF MS techniques for microbial identification: a brief overview of their diverse applications
Kyoung-Soon Jang , Young Hwan Kim
J. Microbiol. 2018;56(4):209-216.   Published online February 28, 2018
DOI: https://doi.org/10.1007/s12275-018-7457-0
  • 43 View
  • 0 Download
  • 101 Crossref
AbstractAbstract
Advances in mass spectrometry have enabled the investigation of various biological systems by directly analyzing diverse sets of biomolecules (i.e., proteins, lipids, and carbohydrates), thus making a significant impact on the life sciences field. Over the past decade, matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) has been widely utilized as a rapid and reliable method for the identification of microorganisms. MALDI-TOF MS has come into widespread use despite its relatively low resolving power (full width at half maximum, FWHM: < 5,000) and its incompatibility with tandem MS analysis, features with which other high-resolution mass spectrometers are equipped. Microbial identification is achieved by searching databases containing mass spectra of peptides and proteins extracted from microorganisms of interest, using scoring algorithms to match analyzed spectra with reference spectra. In this paper, we give a brief overview of the diverse applications of rapid and robust MALDI-TOF MS-based techniques for microbial identification in a variety of fields, such as clinical diagnosis and environmental and food monitoring. We also describe the fundamental principles of MALDI-TOF MS. The general specifications of the two major MS-based microbial identification systems available in the global market (BioTyper® and VITEK® MS Plus) and the distribution of these instruments in Republic of Korea are also discussed. The current review provides an understanding of this emerging microbial identification and classification technology and will help bacteriologists and cell biologists take advantage of this powerful technique.

Citations

Citations to this article as recorded by  
  • Thermo-responsive 3D nanostructures for enhanced performance in food-poisoning bacterial analysis
    Yeonwoo Jeong, Jueun Kim, Jina Lee, Seungbeom Seo, Seokbeom Roh, Gyudo Lee, Bong Gill Choi, Nam Ho Bae, Juyeon Jung, Taejoon Kang, Kyoung G. Lee, Eun-Kyung Lim
    Materials Horizons.2025;[Epub]     CrossRef
  • Pioneering Klebsiella Pneumoniae Antibiotic Resistance Prediction With Artificial Intelligence-Clinical Decision Support System–Enhanced Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry: Retrospective Study
    Ming-Jr Jian, Tai-Han Lin, Hsing-Yi Chung, Chih-Kai Chang, Cherng-Lih Perng, Feng-Yee Chang, Hung-Sheng Shang
    Journal of Medical Internet Research.2024; 26: e58039.     CrossRef
  • Feasibility of Biomarker-Based Taxonomic Classification: A Case Study of the Marine Red Alga Laurencia snackeyi (Weber Bosse) M. Masuda
    Boon Ful Ng, Wei Lun Ng, Wai Mun Lum, Swee Keong Yeap, Yoong Soon Yong
    Phycology.2024; 4(3): 363.     CrossRef
  • Artificial Intelligence-Clinical Decision Support System in Infectious Disease Control: Combatting Multidrug-Resistant Klebsiella pneumoniae with Machine Learning
    Ming-Jr Jian, Tai-Han Lin, Hsing-Yi Chung, Chih-Kai Chang, Cherng-Lih Perng, Feng-Yee Chang, Hung-Sheng Shang
    Infection and Drug Resistance.2024; Volume 17: 2899.     CrossRef
  • Investigate the relationship between Bacillus coagulans and its inhibition of chemotherapy‐induced lung cancer resistance
    Yu‐Shan Ting, Yi‐Shiuan Wang, En‐Chi Liao, Hsiu‐Chuan Chou, Hong‐Lin Chan
    Biotechnology and Applied Biochemistry.2024; 71(6): 1453.     CrossRef
  • Probe‐based mass spectrometry approaches for single‐cell and single‐organelle measurements
    Daniel C. Castro, Peter Chan‐Andersen, Elena V. Romanova, Jonathan V. Sweedler
    Mass Spectrometry Reviews.2024; 43(4): 888.     CrossRef
  • Revealing the genetic traits of the foodborne microbial genus Hafnia: Implications for the human gut microbiome
    Federico Fontana, Giulia Longhi, Elisa Carli, Giulia Alessandri, Leonardo Mancabelli, Gabriele Andrea Lugli, Chiara Tarracchini, Alice Viappiani, Rosaria Anzalone, Francesca Turroni, Christian Milani, Marco Ventura
    Environmental Microbiology.2024;[Epub]     CrossRef
  • Factors affecting the quality and reproducibility of MALDI-TOF MS identification for human Capnocytophaga species
    Ahmed Algahawi, Inka Harju, Eija Könönen, Kaisu Rantakokko-Jalava, Mervi Gürsoy
    Journal of Microbiological Methods.2024; 220: 106911.     CrossRef
  • Identification of Escherichia coli strains using MALDI-TOF MS combined with long short-term memory neural networks
    Qiqi Mao, Xie Zhang, Zeping Xu, Ya Xiao, Yufei Song, Feng Xu
    Aging.2024; 16(13): 11018.     CrossRef
  • Rapid bacterial identification through volatile organic compound analysis and deep learning
    Bowen Yan, Lin Zeng, Yanyi Lu, Min Li, Weiping Lu, Bangfu Zhou, Qinghua He
    BMC Bioinformatics.2024;[Epub]     CrossRef
  • Artificial intelligence-clinical decision support system for enhanced infectious disease management: Accelerating ceftazidime-avibactam resistance detection in Klebsiella pneumoniae
    Tai-Han Lin, Hsing-Yi Chung, Ming-Jr Jian, Chih-Kai Chang, Hung-Hsin Lin, Ching-Mei Yu, Cherng-Lih Perng, Feng-Yee Chang, Chien-Wen Chen, Chun-Hsiang Chiu, Hung-Sheng Shang
    Journal of Infection and Public Health.2024; 17(10): 102541.     CrossRef
  • MSProfileR: An Open-Source Software for Quality Control of Matrix-Assisted Laser Desorption Ionization–Time of Flight Spectra
    Refka Ben Hamouda, Bertrand Estellon, Khalil Himet, Aimen Cherif, Hugo Marthinet, Jean-Marie Loreau, Gaëtan Texier, Samuel Granjeaud, Lionel Almeras
    Informatics.2024; 11(2): 39.     CrossRef
  • Innovative strategies against superbugs: Developing an AI-CDSS for precise Stenotrophomonas maltophilia treatment
    Tai-Han Lin, Hsing-Yi Chung, Ming-Jr Jian, Chih-Kai Chang, Hung-Hsin Lin, Ching-Mei Yu, Cherng-Lih Perng, Feng-Yee Chang, Chien-Wen Chen, Hung-Sheng Shang
    Journal of Global Antimicrobial Resistance.2024; 38: 173.     CrossRef
  • Comparative evaluation of BacT/ALERT VIRTUO and BACTEC FX400 blood culture systems for the detection of bloodstream infections
    Yurong Qin, Yiwen Liao, Jingfang Zhou, Weijiang Liu, Huimin Chen, Xiaoli Chen, Weisha Wang, Ni Zhang, Yunhu Zhao, Liang Wang, Bing Gu, Suling Liu, Benjamin M. Liu
    Microbiology Spectrum.2024;[Epub]     CrossRef
  • Evaluation of the Zybio EXS3000 mass spectrometry in routine identification of Clinical isolates
    Song Li, Dexing Han, Xiaowei Chen, Dexiang Zheng, Yimei Cai, Dongling Lin, Xuan Zhang, Peifeng Ke, Pinghua Qu, Cha Chen
    Heliyon.2023; 9(8): e18990.     CrossRef
  • Evaluating the microcystin-LR-degrading potential of bacteria growing in extreme and polluted environments
    Thabile Lukhele, Titus Alfred Makudali Msagati
    Archives of Microbiology.2023;[Epub]     CrossRef
  • Diagnostic test accuracy of an automated device for the MALDI target preparation for microbial identification
    Abdessalam Cherkaoui, Arnaud Riat, Gesuele Renzi, Adrien Fischer, Jacques Schrenzel
    European Journal of Clinical Microbiology & Infectious Diseases.2023; 42(2): 153.     CrossRef
  • Sample preparation and culture condition effects on MALDI‐TOF MS identification of bacteria: A review
    Natalija Topić Popović, Snježana P. Kazazić, Krunoslav Bojanić, Ivančica Strunjak‐Perović, Rozelindra Čož‐Rakovac
    Mass Spectrometry Reviews.2023; 42(5): 1589.     CrossRef
  • Biofilm formation risk assessment for psychrotrophic Pseudomonas in raw milk by MALDI-TOF mass spectrometry
    Minghui Yan, Liwen Luo, Dandan Li, Zhenmin Liu, Ran Wei, Jia Yi, Liang Qiao, Chunping You
    LWT.2023; 176: 114508.     CrossRef
  • Oral Microbiota—One Habitat or Diverse Niches? A Pilot Study of Sampling and Identification of Oral Bacterial and Fungal Biota in Patients with Type I Diabetes Mellitus Treated with Insulin Pump
    Iwona Gregorczyk-Maga, Mateusz Fiema, Michal Kania, Estera Jachowicz-Matczak, Dorota Romaniszyn, Karolina Gerreth, Tomasz Klupa, Jadwiga Wójkowska-Mach
    International Journal of Environmental Research and Public Health.2023; 20(3): 2252.     CrossRef
  • Mass Spectrometry Analysis for Clinical Applications: A Review
    Hong Zhang, Yali Yang, Yanxiao Jiang, Meng Zhang, Zhilong Xu, Xiaofei Wang, Jie Jiang
    Critical Reviews in Analytical Chemistry.2023; : 1.     CrossRef
  • Systematic review–how do we identify urinary tract infections today?
    Čeprnja Marina, Oros Damir, Janeš Andrea, Žučko Jurica, Barišić Karmela, Škrlin Jasenka, Starčević Antonio
    Open Journal of Bacteriology.2023; 7(1): 001.     CrossRef
  • Machine learning combined with MALDI-TOF MS has the potential ability to identify serotypes of the avian pathogenRiemerella anatipestifer
    Zhuohao Wang, Xiangkuan Zheng, Jin Chen, Zhengjun Xu, Yongyi Dong, Guoxin Xu, Long Chen, Wei Zhang
    Journal of Applied Microbiology.2023;[Epub]     CrossRef
  • Illuminating the oral microbiome and its host interactions: recent advancements in omics and bioinformatics technologies in the context of oral microbiome research
    Jonathon L Baker
    FEMS Microbiology Reviews.2023;[Epub]     CrossRef
  • The transmittable through stinging microbiota differs between honeybees and wasps: a potentially greater microbial risk of the wasp sting for humans
    Ioanna Gkitsaki, Alexandros Papachristoforou, Sofia Michailidou, Nikolaos Karamvalis, Ioannis Iliadis, Dimitra Graikini, Christina Sakarikou, Evangelos Tsoukis, Anagnostis Argyriou, Efstathios Giaouris
    International Microbiology.2023; 26(3): 663.     CrossRef
  • Recent Advances in Mass Spectrometry-Based Spatially Resolved Molecular Imaging of Drug Disposition and Metabolomics
    Yu Chen, Ying Liu, Ximei Li, Yan He, Weiwei Li, Ying Peng, Jiang Zheng
    Drug Metabolism and Disposition.2023; 51(10): 1273.     CrossRef
  • Identification of Vibrio metschnikovii and Vibrio injensis Isolated from Leachate Ponds: Characterization of Their Antibiotic Resistance and Virulence-Associated Genes
    Aura Falco, Miguel Ángel Villaquirán-Muriel, José David Gallo Pérez, Alejandra Mondragón-Quiguanas, Carlos Aranaga, Adriana Correa
    Antibiotics.2023; 12(11): 1571.     CrossRef
  • Recent studies on advance spectroscopic techniques for the identification of microorganisms: A review
    Muhammad Ramzan, Ali Raza, Zaib un Nisa, Syed Ghulam Musharraf
    Arabian Journal of Chemistry.2023; 16(3): 104521.     CrossRef
  • A comprehensive review of microbial contamination in the indoor environment: sources, sampling, health risks, and mitigation strategies
    Hitikk Chawla, Purnima Anand, Kritika Garg, Neeru Bhagat, Shivani G. Varmani, Tanu Bansal, Andrew J. McBain, Ruchi Gulati Marwah
    Frontiers in Public Health.2023;[Epub]     CrossRef
  • Molecular epidemiology of antimicrobial-resistant Pseudomonas aeruginosa in a veterinary teaching hospital environment
    Jeerawat Soonthornsit, Kotchawan Pimwaraluck, Noppakhun Kongmuang, Ploy Pratya, Nathita Phumthanakorn
    Veterinary Research Communications.2023; 47(1): 73.     CrossRef
  • Topical issues of antibiotic resistance: modern methods of identification of bacterial pathogens and determination of their qualities
    E. S. Starikova, S. G. Fominykh
    Scientific Bulletin of the Omsk State Medical University.2023; 3(4): 82.     CrossRef
  • Potential Probiotic Lactic Acid Bacteria with Anti-Penicillium expansum Activity from Different Species of Tunisian Edible Snails
    Ghada Rabaoui, Fernando Sánchez-Juanes, Mohamed Tebini, Karim Naghmouchi, Juan Luis Muñoz Bellido, Kamel Ben-Mahrez, Samia Réjiba
    Probiotics and Antimicrobial Proteins.2023; 15(1): 82.     CrossRef
  • Airborne transmission of biological agents within the indoor built environment: a multidisciplinary review
    Christos D. Argyropoulos, Vasiliki Skoulou, Georgios Efthimiou, Apostolos K. Michopoulos
    Air Quality, Atmosphere & Health.2023; 16(3): 477.     CrossRef
  • A Single-Laboratory Performance Evaluation of MALDI-TOF MS in Rapid Identification of Staphylococcus aureus, Cronobacter sakazakii, Vibrio parahaemolyticus, and Some Closely Related Bacterial Species of Public Health Importance
    Irshad M Sulaiman, Nancy Miranda, Whitney Hook, Joseph Mendoza, Quincy Kumfert, Tamayo Barnes, Kidon Sung, Saeed Khan, Mohamed Nawaz, Pratik Banerjee, Steven Simpson, Kevin Karem
    Journal of AOAC International.2023; 106(6): 1574.     CrossRef
  • Analysis of Bacterial Pathogens Causing Complicating HAP in Patients with Secondary Peritonitis
    Josef Chudáček, Petr Špička, Milan Kolar, Martin Stašek, Štefan Kolcún, Dušan Klos, Kristýna Hricová, Patrik Mlynarcik, Vendula Pudová, Olga Klementová, Rostislav Horáček
    Antibiotics.2023; 12(3): 527.     CrossRef
  • Comparison of Autof Ms1000 and EXS3000 MALDI-TOF MS Platforms for Routine Identification of Microorganisms
    Lijuan Xiong, Xu Long, Lijun Ni, Lili Wang, Yang Zhang, Lili Cui, Jian Guo, Chunying Yang
    Infection and Drug Resistance.2023; Volume 16: 913.     CrossRef
  • A novel biochemistry approach combined with MALDI-TOF MS to discriminate Escherichia coli and Shigella species
    Tianyi Li, Qinghua Zou, Binghua Zhang, Di Xiao
    Analytica Chimica Acta.2023; 1284: 341967.     CrossRef
  • A Graphene-Coated Silicon Wafer Plate Improves the Sensitivity and Reproducibility of MALDI-TOF MS Analysis of Proteins
    Yoon Kyung Choi, Dong Huey Cheon, Won Suk Yang, Je-Hyun Baek
    Journal of the American Society for Mass Spectrometry.2023; 34(9): 2034.     CrossRef
  • A novel strategy for screening mutations in the voltage-gated sodium channel gene of Aedes albopictus based on multiplex PCR-mass spectrometry minisequencing technology
    Qunzheng Mu, Xin Zhao, Fengfeng Li, Wenyu Li, Xinxin Zhou, Xinchang Lun, Yiguan Wang, Dongdong Hua, Qiyong Liu, Di Xiao, Fengxia Meng
    Infectious Diseases of Poverty.2023;[Epub]     CrossRef
  • Comparison of Small Biomolecule Ionization and Fragmentation in Pseudomonas aeruginosa Using Common MALDI Matrices
    Nathan C. Wamer, Chase N. Morse, Jennifer N. Gadient, Taylor A. Dodson, Eric A. Carlson, Erin G. Prestwich
    Journal of the American Society for Mass Spectrometry.2023; 34(3): 355.     CrossRef
  • Bacterial diversity analysis of coastal superficial seawaters near aquaculture facilities, using MALDI-TOF approach and Ribopeaks database
    Jorge Freitas, Rosa Perestrelo, Paulo Vaz-Pires, José S. Câmara
    Aquaculture.2022; 556: 738263.     CrossRef
  • Application of MALDI-TOF MS for identification of environmental bacteria: A review
    Mohammad Y. Ashfaq, Dana A. Da'na, Mohammad A. Al-Ghouti
    Journal of Environmental Management.2022; 305: 114359.     CrossRef
  • MALDI-Based Mass Spectrometry in Clinical Testing: Focus on Bacterial Identification
    Sachio Tsuchida, Tomohiro Nakayama
    Applied Sciences.2022; 12(6): 2814.     CrossRef
  • Rummeliibacillus suwonensis: First Time Isolation from Human Feces by Culturomics
    Gianluca Quaranta, Jessica Mandrioli, Stefano Bibbò, Alessandra Guarnaccia, Giovanni Fancello, Cecilia Simonini, Amedeo Amedei, Elena Niccolai, Giulia Nannini, Giovanni Cammarota, Maurizio Sanguinetti, Luca Masucci
    Current Microbiology.2022;[Epub]     CrossRef
  • Limitations of matrix-assisted laser desorption/ionization time-of-flight mass spectrometry for the identification of Aspergillus species
    Jin Shao, Qiqi Wang, Linwei Wei, Zhe Wan, Ruoyu Li, Jin Yu
    Medical Mycology.2022;[Epub]     CrossRef
  • Identification of ticks from an old collection by MALDI-TOF MS
    Saidou Ahamada M'madi, Adama Zan Diarra, Lionel Almeras, Philippe Parola
    Journal of Proteomics.2022; 264: 104623.     CrossRef
  • Recent Advances and Potential Future Applications of MALDI-TOF Mass Spectrometry for Identification of Helminths
    Issa Sy, Lucie Conrad, Sören L. Becker
    Diagnostics.2022; 12(12): 3035.     CrossRef
  • Clostridium subterminale infection in a patient with diffuse large B-cell lymphoma and haemophagocytic syndrome: A case report and literature review
    Ying Zhou, Sheng Wang, Xing-bei Weng
    Journal of International Medical Research.2022;[Epub]     CrossRef
  • Differentiating between Enterococcusfaecium and Enterococcuslactis by Matrix-Assisted Laser Desorption Ionization Time-of-Flight Mass Spectrometry
    Eiseul Kim, Seung-Min Yang, Hyun-Jae Kim, Hae-Yeong Kim
    Foods.2022; 11(7): 1046.     CrossRef
  • Classification of Environmental Strains from Order to Genus Levels Using Lipid and Protein MALDI-ToF Fingerprintings and Chemotaxonomic Network Analysis
    Marceau Levasseur, Téo Hebra, Nicolas Elie, Vincent Guérineau, David Touboul, Véronique Eparvier
    Microorganisms.2022; 10(4): 831.     CrossRef
  • Application of Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry for the Rapid Identification of Yeast Species From Polar Regions
    Chenyang He, Jianju Feng, Jing Su, Tao Zhang, Liyan Yu
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • MALDI-TOF MS database expansion for identification of Bacillus and related genera isolated from a pharmaceutical facility
    Luciana Veloso da Costa, Rebeca Vitoria da Silva Lage de Miranda, Cristhiane Moura Falavina dos Reis, Joyce Modesto de Andrade, Fernanda Ventura Cruz, Adriana Marques Frazão, Erica Louro da Fonseca, Juliana Nunes Ramos, Marcelo Luiz Lima Brandão, Verônica
    Journal of Microbiological Methods.2022; 203: 106625.     CrossRef
  • Production of mannosylerythritol lipids: biosynthesis, multi-omics approaches, and commercial exploitation
    Stefany Solano-González, Frank Solano-Campos
    Molecular Omics.2022; 18(8): 699.     CrossRef
  • Ion Addition by Electrolysis to Improve the Quantitative Analysis of Bacteria with MALDI-TOF MS
    Chaoying Zhang, Zengnan Wu, Xinchang Gao, Xia Wang, Haifang Li, Jin-Ming Lin
    Analytical Chemistry.2022;[Epub]     CrossRef
  • Development of high-resolution multidimensional native protein microfluidic chip electrophoresis fingerprinting and its application in the quick analysis of unknown microorganisms
    Zongliang Quan, Yu Chen, Xiaochao Zhao, Shiyong Yu, Yongrui Li, Yuanqing Xu, Jiandong Xu, Hui Chen, Lina Geng, Yulin Deng
    Journal of Chromatography A.2022; 1665: 462797.     CrossRef
  • Prevalence and Characteristics of Carriage of Neisseria meningitidis Among Young Israeli Adults
    Noa Sofer-Sali, Diana Roif-Kaminsky, Yair Motro, Boris Khalfin, Eva Avramovich, Inbal Galor, Amir Shlaifer, Adir Sommer, Ran Rutenberg, Yacov Sachter, Avraham Yitzhak, Daniel Grupel, Jacob Moran-Gilad
    Open Forum Infectious Diseases.2022;[Epub]     CrossRef
  • MALDI-TOF MS: application in diagnosis, dereplication, biomolecule profiling and microbial ecology
    Najeebul Tarfeen, Khair Ul Nisa, Qadrul Nisa
    Proceedings of the Indian National Science Academy.2022; 88(3): 277.     CrossRef
  • MALDI-TOF Mass Spectrometry Analysis and Human Post-Mortem Microbial Community: A Pilot Study
    Carlo Pietro Campobasso, Gennaro Mastroianni, Alessandro Feola, Pasquale Mascolo, Anna Carfora, Bruno Liguori, Pierluca Zangani, Federica Dell’Annunziata, Veronica Folliero, Arianna Petrillo, Maria Elena Della Pepa, Francesca Martora, Marilena Galdiero
    International Journal of Environmental Research and Public Health.2022; 19(7): 4354.     CrossRef
  • Evaluation of Autof MS 1000 and Vitek MS MALDI-TOF MS System in Identification of Closely-Related Yeasts Causing Invasive Fungal Diseases
    Qiaolian Yi, Meng Xiao, Xin Fan, Ge Zhang, Yang Yang, Jing-Jia Zhang, Si-Meng Duan, Jing-Wei Cheng, Ying Li, Meng-Lan Zhou, Shu-Ying Yu, Jing-Jing Huang, Xin-Fei Chen, Xin Hou, Fanrong Kong, Timothy Kudinha, Ying-Chun Xu
    Frontiers in Cellular and Infection Microbiology.2021;[Epub]     CrossRef
  • In vivo antimicrobial activity of 0.6% povidone-iodine eye drops in patients undergoing intravitreal injections: a prospective study
    Daniele Tognetto, Marco R. Pastore, Lorenzo Belfanti, Riccardo Merli, Alex L. Vinciguerra, Marina Busetti, Giulia Barbati, Gabriella Cirigliano
    Scientific Reports.2021;[Epub]     CrossRef
  • Instrumental analytical tools for mycobacteria characterisation
    Veronika Ozana, Karel Hruška
    Czech Journal of Food Sciences.2021; 39(4): 235.     CrossRef
  • Acid and aluminium-tolerant microbes isolated from China space station assembly cleanroom surfaces and identified by 16S rRNA/ITS sequencing and MALDI-TOF MS
    Nino Rcheulishvili, Dimitri Papukashvili, Yasmeen Shakir, Yulin Deng, Ying Zhang
    International Journal of Astrobiology.2021; 20(2): 133.     CrossRef
  • Capture and detection of urine bacteria using a microchannel silicon nanowire microfluidic chip coupled with MALDI-TOF MS
    Yuexin Li, Tao Wang, Jianmin Wu
    The Analyst.2021; 146(4): 1151.     CrossRef
  • Differentiation of Gastric Helicobacter Species Using MALDI-TOF Mass Spectrometry
    Helena Berlamont, Chloë De Witte, Sofie De Bruyckere, James G. Fox, Steffen Backert, Annemieke Smet, Filip Boyen, Freddy Haesebrouck
    Pathogens.2021; 10(3): 366.     CrossRef
  • Deep convolutional neural network: a novel approach for the detection of Aspergillus fungi via stereomicroscopy
    Haozhong Ma, Jinshan Yang, Xiaolu Chen, Xinyu Jiang, Yimin Su, Shanlei Qiao, Guowei Zhong
    Journal of Microbiology.2021; 59(6): 563.     CrossRef
  • Asynchronous parallel Bayesian optimization for AI-driven cloud laboratories
    Trevor S Frisby, Zhiyun Gong, Christopher James Langmead
    Bioinformatics.2021; 37(Supplement): i451.     CrossRef
  • The distribution of cultivable oral anaerobic microbiota identified by MALDI-TOF MS in healthy subjects and in patients with periodontal disease
    Yu-Shan Wei, Yi-Ru Chang, Yi-Ting Tsai, Yi-Ting Yang, Shang-Hui Weng, Lin-Fang Tseng, Hsiu-Chuan Chou, Alice Tinyu Hu, En-Chi Liao, Hsin-Yi Chen, Guan-Yu Lin, Wen-Chi Cheng, Hong-Lin Chan
    Journal of Pharmaceutical and Biomedical Analysis.2021; 192: 113647.     CrossRef
  • Exploration of tissue distribution of ginsenoside Rg1 by LC-MS/MS and nanospray desorption electrospray ionization mass spectrometry
    Wenlong Wei, Zhenwei Li, Haojv Li, Yaling An, Hua Qu, Changliang Yao, Jianqing Zhang, Jiayuan Li, Gaole Zhang, Yanchao Shi, De-an Guo
    Journal of Pharmaceutical and Biomedical Analysis.2021; 198: 113999.     CrossRef
  • Evaluation of three sample preparation methods for the identification of clinical strains by using two MALDI‐TOF MS systems
    Jinghua Wang, Hualiang Wang, Keya Cai, Peijuan Yu, Yajuan Liu, Gaoling Zhao, Rong Chen, Rong Xu, Maowen Yu
    Journal of Mass Spectrometry.2021;[Epub]     CrossRef
  • Modern Analytical Techniques for Detection of Bacteria in Surface and Wastewaters
    Alexandra Canciu, Mihaela Tertis, Oana Hosu, Andreea Cernat, Cecilia Cristea, Florin Graur
    Sustainability.2021; 13(13): 7229.     CrossRef
  • Rare Lelliottia nimipressuralis from a wound infection case report using whole genome sequencing-based bacterial identification
    Hosoon Choi, Munok Hwang, Piyali Chatterjee, Chetan Jinadatha, Dhammika H. Navarathna
    Diagnostic Microbiology and Infectious Disease.2021; 101(4): 115538.     CrossRef
  • Cultivation and Genomic Characterization of the Bile Bacterial Species From Cholecystitis Patients
    Qiulong Yan, Siyi Zhang, Shenghui Li, Guangyang Wang, Aiqin Zhang, Taiyang Jin, Yue Zhang, Qingbo Lv, Manchun Xiao, Yuanyuan Sun, Xiang Li, Song Cui, Rui Li, Xiaochi Ma, Chao Wang, Xiangge Tian, Xiaohui Duan, Yi Xin, Xianhai Mao, Yufang Ma
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Establishment and Application of Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry for Detection of Shewanella Genus
    Keyi Yu, Zhenzhou Huang, Ying Li, Qingbo Fu, Lirong Lin, Shiyao Wu, Hang Dai, Hongyan Cai, Yue Xiao, Ruiting Lan, Duochun Wang
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Proteomic and microbial assessments on the effect of Antrodia cinnamomea in C57BL/6 mice
    Yi-Ting Tsai, Jhen-Wei Ruan, Cherng-Shyang Chang, Mei-Lan Ko, Hsiu-Chuan Chou, Chi-Chien Lin, Chiao-Mei Lin, Chih-Ting Huang, Yu-Shan Wei, En-Chi Liao, Hsin-Yi Chen, Li-Hsun Lin, Meng-Wei Lin, Cheng-Yuan Kao, Hong-Lin Chan
    Archives of Biochemistry and Biophysics.2021; 713: 109058.     CrossRef
  • A Novel Strategy for the Detection of SARS-CoV-2 Variants Based on Multiplex PCR-Mass Spectrometry Minisequencing Technology
    Fei Zhao, Jinxing Lu, Bing Lu, Tian Qin, Xuemei Wang, Xuexin Hou, Fanliang Meng, Xiaona Xu, Tianyi Li, Haijian Zhou, Jianzhong Zhang, Biao Kan, Ying Huang, Zehui Zhang, Di Xiao, Hui Wang
    Microbiology Spectrum.2021;[Epub]     CrossRef
  • Identification of Aspergillus Conidia in Bronchoalveolar Lavage Using Offline Combination of Capillary Electrophoresis in Supercritical Water-Treated Fused Silica Capillary and Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry
    Jiří Šalplachta, Marie Horká, Pavel Karásek, Filip Růžička, Michal Roth
    Analytical Chemistry.2020; 92(11): 7588.     CrossRef
  • Evaluation of the Autof MS1000 mass spectrometer in the identification of clinical isolates
    Qiong Ma, Qi Zhang, Youhua Yuan, Wenjuan Yan, Shanmei Wang, Junhong Xu, Jiangfeng Zhang, Yuming Wang, Yi Li
    BMC Microbiology.2020;[Epub]     CrossRef
  • Novel specific peaks for differentiating the Lactobacillus plantarum group using matrix-assisted laser desorption ionization time-of-flight mass spectrometry
    Eiseul Kim, Seung-Min Yang, Hyeon-Be Kim, Hae-Yeong Kim
    Journal of Microbiological Methods.2020; 178: 106064.     CrossRef
  • Rapid differentiation of Campylobacter jejuni cell wall mutants using Raman spectroscopy, SERS and mass spectrometry combined with chemometrics
    Malama Chisanga, Dennis Linton, Howbeer Muhamadali, David I. Ellis, Richard L. Kimber, Aleksandr Mironov, Royston Goodacre
    The Analyst.2020; 145(4): 1236.     CrossRef
  • Novel Strategy for Rapidly and Safely Distinguishing Bacillus anthracis and Bacillus cereus by Use of Peptide Mass Fingerprints Based on Matrix-Assisted Laser Desorption Ionization–Time of Flight Mass Spectrometry
    Jianchun Wei, Huijuan Zhang, Huifang Zhang, Enmin Zhang, Binghua Zhang, Fei Zhao, Di Xiao, Erin McElvania
    Journal of Clinical Microbiology.2020;[Epub]     CrossRef
  • Efficacy of low energy electron beam on microbial decontamination of spices
    Urszula Gryczka, Hiromi Kameya, Keitarou Kimura, Setsuko Todoriki, Wojciech Migdał, Sylwester Bułka
    Radiation Physics and Chemistry.2020; 170: 108662.     CrossRef
  • Identification of hyperglycemia-associated microbiota alterations in saliva and gingival sulcus
    Yu-Shan Wei, Ya-Chun Hsiao, Guan-Wei Su, Yi-Ru Chang, Hsiu-Pin Lin, Yi-Shiuan Wang, Yi-Ting Tsai, En-Chi Liao, Hsin-Yi Chen, Hsiu-Chuan Chou, Mei-Lan Ko, Wen-Hung Kuo, Shing-Jyh Chang, Wen-Chi Cheng, Hong-Lin Chan
    Archives of Biochemistry and Biophysics.2020; 682: 108278.     CrossRef
  • Recent update in diagnosis and treatment of human pythiosis
    Maria Nina Chitasombat, Passara Jongkhajornpong, Kaevalin Lekhanont, Theerapong Krajaejun
    PeerJ.2020; 8: e8555.     CrossRef
  • Application of MALDI-TOF MS for Rapid Identification of Microorganisms in Food Microbiology
    Hiroko Kawasaki
    Japanese Journal of Food Microbiology.2020; 37(4): 165.     CrossRef
  • MALDI-TOF mass spectrometry typing for predominant serovars of non-typhoidal Salmonella in a Thai broiler industry
    Suthee Mangmee, Onrapak Reamtong, Thareerat Kalambaheti, Sittiruk Roytrakul, Piengchan Sonthayanon
    Food Control.2020; 113: 107188.     CrossRef
  • Spontaneous bacterial peritonitis caused by Campylobacter Coli in cirrhotic patient
    Cheng-Hui Wang, Ting-Han Tai, Shih-Yen Weng, Shin-Wen Yeh, Sheng-Jie Shiue, Ganbolor Jargalsaikhan, Ming-Shun Wu
    Medicine.2020; 99(21): e19887.     CrossRef
  • Rapid screening of marine bacterial symbionts using MALDI-TOF MS
    Livia M. R. Vidal, Tainá M. Venas, Aline R. P. Gonçalves, Hannah K. Mattsson, Raphael V. P. Silva, Maria S. Nóbrega, Gustavo P. R. Azevedo, Gizele D. Garcia, Diogo A. Tschoeke, Verônica V. Vieira, Fabiano L. Thompson, Cristiane C. Thompson
    Archives of Microbiology.2020; 202(8): 2329.     CrossRef
  • Identification of pathogens from native urine samples by MALDI-TOF/TOF tandem mass spectrometry
    Damir Oros, Marina Ceprnja, Jurica Zucko, Mario Cindric, Amela Hozic, Jasenka Skrlin, Karmela Barisic, Ena Melvan, Ksenija Uroic, Blazenka Kos, Antonio Starcevic
    Clinical Proteomics.2020;[Epub]     CrossRef
  • Sensitive detection of quinoline-derivatized sitagliptin in small volumes of human plasma by MALDI-TOF mass spectrometry
    Yi-Shan Li, Wei-Lung Tseng, Chi-Yu Lu
    Talanta.2020; 218: 121143.     CrossRef
  • The management of anti-infective agents in intensive care units: the potential role of a ‘fast’ pharmacology
    Dario Cattaneo, Alberto Corona, Francesco Giuseppe De Rosa, Cristina Gervasoni, Danijela Kocic, Deborah Je Marriott
    Expert Review of Clinical Pharmacology.2020; 13(4): 355.     CrossRef
  • Identification of bacteria in juice/lettuce using magnetic nanoparticles and selected reaction monitoring mass spectrometry
    Cheng-Tung Chen, Je-Wei Yu, Yen-Peng Ho
    Journal of Food and Drug Analysis.2019; 27(2): 575.     CrossRef
  • Application of the Whole Genome-Based Bacterial Identification System, TrueBac ID, Using Clinical Isolates That Were Not Identified With Three Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry (MALDI-TOF MS) Systems
    Sung-Min Ha, Chang Ki Kim, Juhye Roh, Jung-Hyun Byun, Seung-Jo Yang, Seon-Bin Choi, Jongsik Chun, Dongeun Yong
    Annals of Laboratory Medicine.2019; 39(6): 530.     CrossRef
  • Antimicrobial random peptide cocktails: a new approach to fight pathogenic bacteria
    Zaid Amso, Zvi Hayouka
    Chemical Communications.2019; 55(14): 2007.     CrossRef
  • Application of MALDI Biotyper System for Rapid Identification of Bacteria Isolated from a Fresh Produce Market
    Israa Mohamad El-Nemr, Mohanad Mushtaha, Sathyavathi Sundararaju, Charmaine Fontejon, Mohammed Suleiman, Patrick Tang, Ipek Goktepe, Mohammad Rubayet Hasan
    Current Microbiology.2019; 76(3): 290.     CrossRef
  • Identification of dermatophytes by MALDI-TOF MS technology in the clinical laboratory
    Maya Azrad, Victoria Freidus, Riad Kassem, Avi Peretz
    International Journal of Mass Spectrometry.2019; 440: 32.     CrossRef
  • Differences between Staphylococcus aureus lineages isolated from ovine and caprine mastitis but not between isolates from clinical or subclinical mastitis
    J. Hoekstra, V.P.M.G. Rutten, M. van den Hout, M.P. Spaninks, L. Benedictus, G. Koop
    Journal of Dairy Science.2019; 102(6): 5430.     CrossRef
  • MALDI–MS Profiling to Address Honey Bee Health Status under Bacterial Challenge through Computational Modeling
    Karim Arafah, Sébastien Nicolas Voisin, Victor Masson, Cédric Alaux, Yves Le Conte, Michel Bocquet, Philippe Bulet
    PROTEOMICS.2019;[Epub]     CrossRef
  • Rapid Antimicrobial Susceptibility Testing of Patient Urine Samples Using Large Volume Free-Solution Light Scattering Microscopy
    Manni Mo, Yunze Yang, Fenni Zhang, Wenwen Jing, Rafael Iriya, John Popovich, Shaopeng Wang, Thomas Grys, Shelley E. Haydel, Nongjian Tao
    Analytical Chemistry.2019; 91(15): 10164.     CrossRef
  • Advances in Chemical and Biological Methods to Identify Microorganisms—From Past to Present
    Ricardo Franco-Duarte, Lucia Černáková, Snehal Kadam, Karishma S. Kaushik, Bahare Salehi, Antonio Bevilacqua, Maria Rosaria Corbo, Hubert Antolak, Katarzyna Dybka-Stępień, Martyna Leszczewicz, Saulo Relison Tintino, Veruska Cintia Alexandrino de Souza, Ja
    Microorganisms.2019; 7(5): 130.     CrossRef
  • Rapid MALDI-TOF MS identification of commercial truffles
    Khalid El Karkouri, Carine Couderc, Philippe Decloquement, Annick Abeille, Didier Raoult
    Scientific Reports.2019;[Epub]     CrossRef
  • Association between a Genetic Risk Score Based on Single Nucleotide Polymorphisms of Coronary Artery Disease-Related Genes and Left Main Coronary Artery Disease
    Zhengxi Xu, Hanning Liu, Cheng Sun, Ke Si, Yan Zhao, Zhe Zheng
    BioMed Research International.2018; 2018: 1.     CrossRef

Journal of Microbiology : Journal of Microbiology
TOP