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Research Support, Non-U.S. Gov't
NOTE] Complete Sequence and Organization of the Sphingobium chungbukense DJ77 pSY2 Plasmid
Sun-Mi Yeon , Young-Chang Kim
J. Microbiol. 2011;49(4):684-688.   Published online September 2, 2011
DOI: https://doi.org/10.1007/s12275-011-1262-3
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AbstractAbstract
Sphingobium chungbukense DJ77 is capable of metabolizing priority chemicals of human health concern such as polycyclic aromatic hydrocarbons (PAHs), extracellular polysaccharide (EPS), and antibiotics. Here, we report the complete DNA and genetic organization of the plasmid pSY2 from strain DJ77. A DNA sequence analysis revealed that pSY2 comprises 18,779 bp encoding 22 open reading frames (ORFs) with 59.5% G+C content. The ORFs on pSY2 were classified into DNA replication, conjugative function, transposition, plasmid stability/partition, and other functional groups (transport, fatty acid biosynthesis, stress, and growth rate regulation). Three ORFs on pSY2 were hypothetical proteins.

Citations

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  • Biochemical characterization and molecular docking analysis of novel esterases from Sphingobium chungbukense DJ77
    Woo-Ri Shin, Hyun-Ju Um, Young-Chang Kim, Sun Chang Kim, Byung-Kwan Cho, Ji-Young Ahn, Jiho Min, Yang-Hoon Kim
    International Journal of Biological Macromolecules.2021; 168: 403.     CrossRef
  • Molecular Docking Analysis and Biochemical Evaluation of Levansucrase from Sphingobium chungbukense DJ77
    Soo Youn Lee, Woo-Ri Shin, Simranjeet Singh Sekhon, Jin-Pyo Lee, Young-Chang Kim, Ji-Young Ahn, Yang-Hoon Kim
    ACS Combinatorial Science.2018; 20(7): 414.     CrossRef
  • Degradative plasmids from sphingomonads
    Andreas Stolz
    FEMS Microbiology Letters.2014; 350(1): 9.     CrossRef

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