Paenibacillus pini sp. nov., a Cellulolytic Bacterium Isolated from the Rhizosphere of Pine Tree

Byung-Chun Kim; Kang Hyun Lee; Mi Na Kim; Eun-Mi Kim; Sung Ran Min; Hyun Soon Kim; Kee-Sun Shin

doi:10.1007/s12275-009-0343-z

Articles

Page Path: HOME > J. Microbiol > Volume 47(6); 2009 > Article

Research Support, Non-U.S. Gov't
Paenibacillus pini sp. nov., a Cellulolytic Bacterium Isolated from the Rhizosphere of Pine Tree: Byung-Chun Kim ¹, Kang Hyun Lee ¹, Mi Na Kim ¹, Eun-Mi Kim ¹, Sung Ran Min ², Hyun Soon Kim ², Kee-Sun Shin ¹; Journal of Microbiology 2009;47(6):699-704.
DOI: https://doi.org/10.1007/s12275-009-0343-z
Published online: February 4, 2010

¹Biological Resources Center, KRIBB, Daejeon 305-806, Republic of Korea, ²Plant Genomics Research Center, KRIBB, Daejeon 305-806, Republic of Korea¹Biological Resources Center, KRIBB, Daejeon 305-806, Republic of Korea, ²Plant Genomics Research Center, KRIBB, Daejeon 305-806, Republic of Korea

Corresponding author: Kee-Sun Shin , Tel: 82-42-860-4624,

Received: 2 November 2009 • Accepted: 15 December 2009

prev next

55 Views
0 Download
20 Crossref
23 Scopus

Full Article

Abstract

Strain S22T, a novel cellulolytic bacterium was isolated from the rhizosphere of pine trees. This isolate was Gram-reaction positive, motile and rods, and formed terminal or subterminal ellipsoidal spores. S22T represented positive activity for catalase, oxidase, esterase (C4), esterase lipase (C8), β-galactosidase, leucine arylamidase, and hydrolysis of esculin. It contained meso-diaminopimelic acid as the diagnostic diamino acid in the cell-wall. The predominant isoprenoid quinone was menaquinone 7 (MK-7), and the major cellular fatty acids were anteiso-C15:0 (52.9%), iso-C16:0 (11.3%), and iso-C15:0 (10.0%). The DNA G+C content was 43.3 mol%. Phylogenetic analysis based on 16S rRNA gene sequences showed that this isolate belonged to the family Paenibacillaceae. S22T exhibited less than 97.0% 16S rRNA gene similarity with all relative type strains in the genus Paenibacillus, and the most closely related strains were Paenibacillus anaericanus MH21T and Paenibacillus ginsengisoli Gsoil 1638T, with equal similarities of 95.8%. This polyphasic evidence suggested that strain S22T should be considered a novel species in the genus Paenibacillus, for which the name, Paenibacillus pini sp. nov., is proposed. The type strain is S22T (=KCTC 13694T =KACC 14198T =JCM 16418T)

Keywords: Paenibacillus pini;cellulose;pine tree;rhizosphere

Figure & Data

References

Citations

Citations to this article as recorded by

Paenibacillus plantiphilus sp. nov. from the plant environment of Zea mays
Peter Kämpfer, André Lipski, Lucie Lamothe, Dominique Clermont, Alexis Criscuolo, John A. McInroy, Stefanie P. Glaeser
Antonie van Leeuwenhoek.2023; 116(9): 883. CrossRef
Paenibacillus auburnensis sp. nov. and Paenibacillus pseudetheri sp. nov., isolated from the rhizosphere of Zea mays
Peter Kämpfer, André Lipski, John A. McInroy, Dominique Clermont, Lucie Lamothe, Stefanie P. Glaeser, Alexis Criscuolo
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Bacillus rhizoplanae sp. nov. from maize roots
Peter Kämpfer, André Lipski, John A. McInroy, Dominique Clermont, Alexis Criscuolo, Stefanie P. Glaeser
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Cellulolytic Properties of a Potentially Lignocellulose-Degrading Bacillus sp. 8E1A Strain Isolated from Bulk Soil
Jakub Dobrzyński, Barbara Wróbel, Ewa Beata Górska
Agronomy.2022; 12(3): 665. CrossRef
Paenibacillus allorhizoplanae sp. nov. from the rhizoplane of a Zea mays root
Peter Kämpfer, André Lipski, Lucie Lamothe, Dominique Clermont, Alexis Criscuolo, John A. McInroy, Stefanie P. Glaeser
Archives of Microbiology.2022;[Epub] CrossRef
Microbiomes of commercially-available pine nuts and sesame seeds
Megan Fay, Joelle K. Salazar, Padmini Ramachandran, Diana Stewart, Massimiliano Cardinale
PLOS ONE.2021; 16(6): e0252605. CrossRef
Paenibacillus allorhizosphaerae sp. nov., from soil of the rhizosphere of Zea mays
Peter Kämpfer, Hans-Jürgen Busse, John A. McInroy, Dominique Clermont, Alexis Criscuolo, Stefanie P. Glaeser
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Paenibacillus nebraskensis sp. nov., isolated from the root surface of field-grown maize
Peter Kämpfer, Hans-Jürgen Busse, John A. McInroy, Chia-Hui Hu, Joseph W. Kloepper, Stefanie P. Glaeser
International Journal of Systematic and Evolutionary Microbiology .2017; 67(12): 4956. CrossRef
Paenibacillus rhizoplanae sp. nov., isolated from the rhizosphere of Zea mays
Peter Kämpfer, Hans-Jürgen Busse, John A. McInroy, Chia-Hui Hu, Joseph W. Kloepper, Stefanie P. Glaeser
International Journal of Systematic and Evolutionary Microbiology.2017; 67(4): 1058. CrossRef
A novel type bacterial flagellar motor that can use divalent cations as a coupling ion
Riku Imazawa, Yuka Takahashi, Wataru Aoki, Motohiko Sano, Masahiro Ito
Scientific Reports.2016;[Epub] CrossRef
Paenibacillus lemnae sp. nov., an endophytic bacterium of duckweed (Lemna aequinoctialis)
Chokchai Kittiwongwattana, Chitti Thawai
International Journal of Systematic and Evolutionary Microbiology .2015; 65(Pt_1): 107. CrossRef
Paenibacillus selenii sp. nov., isolated from selenium mineral soil
Wanwan Xiang, Gejiao Wang, Yuantao Wang, Rong Yao, Fujun Zhang, Rui Wang, Dan Wang, Shixue Zheng
International Journal of Systematic and Evolutionary Microbiology .2014; 64(Pt_8): 2662. CrossRef
Draft Genome Sequence of Paenibacillus pini JCM 16418 T , Isolated from the Rhizosphere of Pine Tree
Masahiro Yuki, Kenshiro Oshima, Wataru Suda, Yumi Oshida, Keiko Kitamura, Toshiya Iida, Masahira Hattori, Moriya Ohkuma
Genome Announcements.2014;[Epub] CrossRef
Paenibacillus shirakamiensis sp. nov., isolated from the trunk surface of a Japanese oak (Quercus crispula)
Akio Tonouchi, Daisuke Tazawa, Takashi Fujita
International Journal of Systematic and Evolutionary Microbiology .2014; 64(Pt_5): 1763. CrossRef
Partial Characterization of α-Galactosidic Activity from the Antarctic Bacterial Isolate, Paenibacillus sp. LX-20 as a Potential Feed Enzyme Source
Inkyung Park, Jaekoo Lee, Jaiesoon Cho
Asian-Australasian Journal of Animal Sciences.2012; 25(6): 852. CrossRef
Identification and Characterization of Psychrotolerant Sporeformers Associated with Fluid Milk Production and Processing
Reid A. Ivy, Matthew L. Ranieri, Nicole H. Martin, Henk C. den Bakker, Bruno M. Xavier, Martin Wiedmann, Kathryn J. Boor
Applied and Environmental Microbiology.2012; 78(6): 1853. CrossRef
Applications of systems biology towards microbial fuel production
Christopher M. Gowen, Stephen S. Fong
Trends in Microbiology.2011; 19(10): 516. CrossRef
Sphingomonas rosea sp. nov. and Sphingomonas swuensis sp. nov., rosy colored β-glucosidase-producing bacteria isolated from soil
Sathiyaraj Srinivasan, Jae-Jin Lee, Myung Kyum Kim
The Journal of Microbiology.2011; 49(4): 610. CrossRef
List of new names and new combinations previously effectively, but not validly, published

International Journal of Systematic and Evolutionary Microbiology.2011; 61(1): 1. CrossRef
Sphingomonas humi sp. nov., isolated from soil
Tae Hoo Yi, Chang-Kyun Han, Sathiyaraj Srinivasan, Kang Jin Lee, Myung Kyum Kim
The Journal of Microbiology.2010; 48(2): 165. CrossRef

Cite this Article

Cite this Article: export Copy Download Format; Close

Download Citation

Download a citation file in RIS format that can be imported by all major citation management software, including EndNote, ProCite, RefWorks, and Reference Manager.

Format:

RIS — For EndNote, ProCite, RefWorks, and most other reference management software
BibTeX — For JabRef, BibDesk, and other BibTeX-specific software

Include:

Citation for the content below
Citation and abstract for the content below

Paenibacillus pini sp. nov., a Cellulolytic Bacterium Isolated from the Rhizosphere of Pine Tree

J. Microbiol. 2009;47(6):699-704. Published online February 4, 2010

DOI: https://doi.org/10.1007/s12275-009-0343-z

Related articles