Abstract
In vitro fecal fermentation is an assay that uses fecal microbes
to ferment foods, the results of which can be used to
evaluate the potential of prebiotic candidates. To date, there
have been various protocols used for in vitro fecal fermentation-
based assessments of food substances. In this study,
we investigated how personal gut microbiota differences and
external factors affect the results of in vitro fecal fermentation
assays. We used Cheonggukjang (CGJ), a Korean traditional
fermented soybean soup that is acknowledged as
healthy functional diet. CGJ was digested in vitro using acids
and enzymes, and then fermented with human feces anaerobically.
After fecal fermentation, the microbiota was analyzed
using MiSeq, and the amount of short chain fatty acids
(SCFAs) were measured using GC-MS. Our results suggest
that CGJ was effectively metabolized by fecal bacteria to produce
SCFAs, and this process resulted in an increase in the
abundance of Coprococcus, Ruminococcus, and Bifidobacterium
and a reduction in the growth of Sutterella, an opportunistic
pathogen. The metabolic activities predicted from the
microbiota shifts indicated enhanced metabolism linked to
methionine biosynthesis and depleted chondroitin sulfate
degradation. Moreover, the amount of SCFAs and microbiota
shifts varied depending on personal microbiota differences.
Our findings also suggest that in vitro fecal fermentation of
CGJ for longer durations may partially affect certain fecal
microbes. Overall, the study discusses the usability of in vitro
gastrointestinal digestion and fecal fermentation (GIDFF)
to imitate the effects of diet-induced microbiome modulation
and its impact on the host.
Citations
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