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Pannonibacter tanglangensis sp. nov., a New Species Isolated from Pond Sediment.
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Pannonibacter tanglangensis sp. nov., a New Species Isolated from Pond Sediment.
Lei Wang1, Yanpeng Cheng2, Panpan Yang1,3, Jinjin Zhang4, Gui Zhang5, Sihui Zhang6, Jing Yang7.8, Zhen Zhang2, Lulu Hu1, Ji Pu7, Yanying Yang9, Xin-He Lai10, Jianguo Xu6,7,8, Yinghui Li1, Qinghua Hu1
Journal of Microbiology 2024;62(9):727-737
DOI: https://doi.org/10.1007/s12275-024-00151-y
Published online: July 5, 2024
1Microbiology Laboratory, Shenzhen Center for Disease Control and Prevention, Shenzhen, 518000, China.
2Division of Communicable Disease Control and Prevention, Shenzhen Center for Disease Control and Prevention, Shenzhen, 518000, China.
3School of Public Health, Shanxi Medical University, Taiyuan, 030001, China.
4Division of Quality and Management, Futian District Center for Disease Control and Prevention, Shenzhen, 518000, China.
5Infection Management Office, Shandong Provincial Hospital Affiliated to Shandong First Medical University, Jinan, 250021, China.
6Department of Laboratorial Science and Technology and Vaccine Research Center, School of Public Health, Peking University, Beijing, 100191, China.
7State Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, 102206, China.
8Research Units of Discovery of Unknown Bacteria and Function, Chinese Academy of Medical Sciences, Beijing, 102206, China.
9Department of Endemic Disease Prevention and Control, Qinghai Institute for Endemic Disease Prevention and Control, Xining, 810000, China.
10Shenzhen Boya Gene Technology Company Limited, Shenzhen, 518107, China.
Corresponding author:  Yinghui Li,
Email: 30913142@qq.com
Qinghua Hu,
Email: huqinghua03@163.com
Received: 12 March 2024   • Revised: 2 June 2024   • Accepted: 9 June 2024
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Two bacterial strains (XCT-34T and XCT-53) isolated from sediment samples of an artificial freshwater reservoir were analyzed using a polyphasic approach. The two isolates are aerobic, Gram-stain-negative, oxidase-negative, catalase-positive, motile with polar flagella, rod-shaped, and approximately 1.4-3.4 × 0.4-0.9 μm in size. Phylogenetic analyses based on 16S rRNA gene and whole-genome sequences showed that the two strains formed a distinct branch within the evolutionary radiation of the genus Pannonibacter, closest to Pannonibacter carbonis Q4.6T (KCTC 52466). Furthermore, lower than threshold average nucleotide identity values (ANI, 85.7-86.4%) and digital DNA-DNA hybridization values (dDDH, 22.3-30.5%) of the two strains compared to the nearest type strains also confirmed that they represented a novel species. Genomic analyses, including annotation of the KEGG pathways, prediction of the secondary metabolism biosynthetic gene clusters and PHI phenotypes, supported functional inference and differentiation of the strains from the closely related taxa. Results of chemotaxonomic and physiological studies revealed that their distinct phenotypic characteristics distinguished them from existing Pannonibacter species. Thus, the two strains are considered to represent a novel species of Pannonibacter, for which the name of Pannonibacter tanglangensis sp. nov. is proposed, with XCT-34T (= KCTC 82332T = GDMCC 1.1947T) as the respective type strain.

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    Pannonibacter tanglangensis sp. nov., a New Species Isolated from Pond Sediment.
    J. Microbiol. 2024;62(9):727-737.   Published online July 5, 2024
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