1Department of Agricultural Biotechnology, Seoul National University, Seoul 08826, Republic of Korea
2Plant Health Center, Seoul National University, Seoul 08826, Republic of Korea
3Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul 08826, Republic of Korea
4Plant Genomics and Breeding Institute, Seoul National University, Seoul 08826, Republic of Korea
© The Microbiological Society of Korea
This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
Acknowledgments
This study was supported by the National Research Foundation of Korea (RS-2025-00553624) and the support of "Cooperative Research Program for Agriculture Science & Technology Development (No. RS-2024-00397951)" Rural Development Administration, Republic of Korea.
| Species | Gene | Type | Description | Regulated genes | Direct binding | Reference |
|---|---|---|---|---|---|---|
| C. albicans | CaACE2 | Zinc-finger | RAM (regulation of ACE2 TF and polarized morphogenesis) signaling network | PMTs | Not studied | Cantero and Ernst (2011); van Wijlick et al. (2016) |
| B. cinerea | BcFTG1 | Zinc-finger | fungal TF containing the GAL4 domain | ALG8 | Not studied | Yang et al. (2024) |
| H. polymorpha | HpHAC1 | bZIP | Major unfolded protein response (UPR) | ALG5, MNN2, MNN4, KTR1, OST1,OST2, OST4, OCR5, SWP1, WBP1 | Not studied | Moon et al. (2015) |
| A. niger | hacA | bZIP | Major unfolded protein response (UPR) | ALG6, ALG8, ALG2, ALG3, DPM1,DPM2, ALG5, ALG7, RFT1, ALG9, SEC59, ALG12, ALG10, OST1, WBP1,OST2, OST3, SST3 | Not studied | Carvalho et al. (2012) |
| C. neoformans | HXL1 | bZIP | HAC1, XBP1-like gene 1 | UPR genes (WBP1, PMT1, PMT2, PMT4, WBP1, ALG7, OST1) | Not studied | Cheon et al. (2011); Glazier et al. (2015) |
| Mediate the unfolded protein response (UPR) pathway | ||||||
| M. robertsii | MrpacC | C2H2-type zinc-finger | pH-responsive TF | STT3, OST3, PMT4 | STT3, OST3, PMT4 | Huang et al. (2015) |
| M. acridum | MaSte12 | C2H2-type zinc-finger | Direct target and functions downstream of the mitogen-activated protein kinase (MAPK) Fus3/Kss1 | OCH1 | Not studied | Wei et al. (2017) |
| Species | Gene | Virulence (O = affected; X = no effect) | Biological function(s) | Glycan structure | Reference |
|---|---|---|---|---|---|
| B. cinerea | bcpmt1 | O | Morphogenesis | Not studied | González et al. (2013, 2014) |
| Fungal adherence | |||||
| Cell wall integrity | |||||
| bcpmt2 | O | Morphogenesis | Not studied | González et al. (2013, 2014) | |
| Fungal adherence | |||||
| Cell wall integrity | |||||
| bcpmt4 | O | Morphogenesis | Not studied | González et al. (2013, 2014); Plaza et al. (2025) | |
| Fungal adherence | |||||
| Cell wall integrity | |||||
| C. graminicola | Cgalg3 | O | ER homeostasis | Not studied | Mei et al. (2023) |
| Fungal growth | |||||
| F. graminearum | RFT1 | O | Mycotoxin synthesis | Not studied | Moon et al. (2025) |
| Vegetative growth | |||||
| Conidiation | |||||
| Sexual development | |||||
| CWH41 (MOGS) | X | Mycotoxin synthesis | Not studied | ||
| Conidiation | |||||
| Sexual development | |||||
| ROT2 (GLS2, GANAB) | X | 6 orthologs showed different phenotypes | Not studied | ||
| Mycotoxin synthesis | |||||
| Vegetative growth | |||||
| Conidiation | |||||
| Sexual development | |||||
| ALG5 | O | Vegetative growth | Not studied | ||
| Sexual development | |||||
| ALG6 | O | Vegetative growth | Not studied | ||
| Sexual development | |||||
| ALG8 | O | Mycotoxin synthesis | Not studied | ||
| Vegetative growth | |||||
| Sexual development | |||||
| PSA1 (MPG) | O | Mycotoxin synthesis | Not studied | ||
| Vegetative growth | |||||
| Conidiation | |||||
| Sexual development | |||||
| MNS1 (MAN1B) | O | 2 orthologs showed different phenotypes | Not studied | ||
| Mycotoxin synthesis | |||||
| Conidiation | |||||
| MNL2 (MAN1A) | O | 4 orthologs showed different phenotypes | Not studied | ||
| Mycotoxin synthesis | |||||
| Vegetative growth | |||||
| Conidiation | |||||
| PMT1, 5, 7 | O | Vegetative growth | Not studied | ||
| Conidiation | |||||
| Sexual development | |||||
| MNN14 | X | Mycotoxin synthesis | Not studied | ||
| Vegetative growth | |||||
| Conidiation | |||||
| ALG1 | X | Vegetative growth | Not studied | ||
| ALG11 | O | Mycotoxin synthesis | Not studied | ||
| Vegetative growth | |||||
| Conidiation | |||||
| Sexual development | |||||
| ALG12 | O | Vegetative growth | Biosynthesis of the Dol-PP-GlcNAc2Man8 (HPLC) | ||
| Sexual development | |||||
| ALG2 | o | Mycotoxin synthesis | Not studied | ||
| Vegetative growth | |||||
| Conidiation | |||||
| Sexual development | |||||
| ALG3 | O | Mycotoxin synthesis | Biosynthesis of the Dol-PP-GlcNAc2Man6 (HPLC) | ||
| Vegetative growth | |||||
| Conidiation | |||||
| Sexual development | |||||
| ALG9 | X | Mycotoxin synthesis | Not studied | ||
| Vegetative growth | |||||
| HOC1 | O | Mycotoxin synthesis | Not studied | ||
| OCH1 | O | Mycotoxin synthesis | Not studied | ||
| Vegetative growth | |||||
| Conidiation | |||||
| KTR5, KTR7 | O | Mycotoxin synthesis | Not studied | ||
| Vegetative growth | |||||
| Conidiation | |||||
| Sexual development | |||||
| KTR4 | O | Vegetative growth | Not studied | ||
| Conidiation | |||||
| KRE2, KTR1, 2, 3, 6 | X | Mycotoxin synthesis | Not studied | ||
| Vegetative growth | |||||
| Sexual development | |||||
| MNT4 | X | Mycotoxin synthesis | Not studied | ||
| Conidiation | |||||
| MNN1, MNT3 | X | Mycotoxin synthesis | Not studied | ||
| MNN10 | X | Conidiation | Not studied | ||
| Sexual development | |||||
| MNN11 | X | Mycotoxin synthesis | Not studied | ||
| Vegetative growth | |||||
| Conidiation | |||||
| Sexual development | |||||
| MNN2, 5 | X | Conidiation | Not studied | ||
| MNN4 | O | Mycotoxin synthesis | Not studied | ||
| Vegetative growth | |||||
| VAN1 | X | Mycotoxin synthesis | Not studied | ||
| Vegetative growth | |||||
| Sexual development | |||||
| ANP1 | O | Mycotoxin synthesis | Not studied | ||
| Vegetative growth | |||||
| Conidiation | |||||
| Sexual development | |||||
| MNN9 | O | Vegetative growth | Not studied | ||
| Sexual development | |||||
| STT3 | O | Not changed | Not studied | ||
| SWP1 | X | Conidiation | Not studied | ||
| WBP1 | O | Mycotoxin synthesis | Not studied | ||
| Vegetative growth | |||||
| Conidiation | |||||
| F. oxysporum | OCH1 | O | Fungal growth | Not studied | Li et al. (2014) |
| Cell wall integrity | |||||
| hyphal adhesion | |||||
| GNT2 | O | Conidium size and morphology | Biosynthesis of the Galactofuranose chains | Lopez-Fernandez et al. (2015) | |
| Oxidative stress resistance | (size-exclusion chromatography with Diffusion Ordered Spectroscopy (DOSY)) | ||||
| cell wall organization, biogenesis and remodelling hyphal fusion | |||||
| Secretion of trafficking vesicles | |||||
| F. oxysporum f. sp. cucumerinum | PMT1 | O | Fungal growth | Not studied | Li et al. (2014) |
| Cell wall integrity | |||||
| Conidiation | |||||
| PMT2 | O | Fungal growth | Not studied | Li et al. (2014) | |
| Cell wall integrity | |||||
| Conidiation | |||||
| PMT4 | O | Fungal growth | Not studied | Xu et al. (2020b) | |
| Cell wall integrity | |||||
| Conidiation | |||||
| M. graminicola | MgAlg2 | O | Cell wall integrity | Biosynthesis of the (GlcNAc)2M3 | Motteram et al. (2011) |
| Yeast-like to filamentous growth switch | (MALDI-ToF-MS) | ||||
| M. oryzae | GLS1 | O | Mycelial growth | Not studied | Chen et al. (2020) |
| Conidiation | |||||
| Invasive hyphal growth | |||||
| GLS2 | O | Mycelial growth | Not studied | Chen et al. (2020) | |
| Conidiation | |||||
| Invasive hyphal growth | |||||
| GTB1 | O | Mycelial growth | Not studied | Chen et al. (2020) | |
| Conidiation | |||||
| Invasive hyphal growth | |||||
| ALG3 | O | Mycelial growth | Not studied | Chen et al. (2014) | |
| Conidiation | |||||
| Invasive growth | |||||
| Oxidative stress resistance | |||||
| PMT2 | O | Fungal adhesion | Not studied | Guo et al. (2016) | |
| Conidial germination | |||||
| cell wall integrity | |||||
| Invasive hyphae growth | |||||
| PMT4 | O | Hyphal growth | Not studied | Pan et al. (2019) | |
| Conidiation | |||||
| Penetration and biotrophic invasion | |||||
| ALG9 | O | Conidial production | Not studied | Zhang et al. (2025) | |
| Appressorium formation | |||||
| Responses to stressors | |||||
| P. capsici | PcSTT3B | O | Vegetative growth | Not studied | Cui et al. (2023) |
| Sporangial release rate | |||||
| Zoospore production | |||||
| P. digitatum | pdpmt2 | O | Cell wall integrity | Not studied | Harries et al. (2015) |
| Conidiogenesis | |||||
| Sensitivity to fungicide | |||||
| U. maydis | gls1 | O | Initial stages of biotrophic growth | Not studied | Fernández-Álvarez et al. (2013) |
| gas1 | O | Intracellular expending | Not studied | Schirawski et al. (2005) | |
| gas2 | O | Intracellular expending | Not studied | Fernández-Álvarez et al. (2013) | |
| pmt4 | O | Appressorium formation | Not studied | Fernández-Álvarez et al. (2009) | |
| Plant cuticle penetration | |||||
| V. dahliae | VdOCH1 | O | Hyphal growth | Not studied | Zhang et al. (2019b) |
| Conidia production | |||||
| Microsclerotia formation | |||||
| Cell wall integrity | |||||
| VdSTT3 | O | Fungal development | Not studied | Su et al. (2018) | |
| Hyphal growth | |||||
| Glycoprotein secretion | |||||
| A. fumigatus | CWH41 | X | Cell wall integrity (CWI) | Not studied | Zhang et al. (2008) |
| Polarity | |||||
| Septation | |||||
| Conidiation | |||||
| AMS1 | Not studied | Conidial formation | Not studied | Li et al. (2009) | |
| Polarity | |||||
| Septation | |||||
| OCH1 | O | Sporulation | Biosynthesis of the Outer glycan chain | Kotz et al. (2010) | |
| (Capillary electrophoresis DNA Sequencer) | |||||
| PMT1 | X | No discernible phenotype | Not studied | Mouyna et al. (2010) | |
| ΔPMT1/PMT4 was lethal | |||||
| PMT2 | O | Essential | Not studied | Mouyna et al. (2010) | |
| PMT4 | X | Mycelial growth | Not studied | Mouyna et al. (2010) | |
| Conidiation | |||||
| Sensitivity to echinocandins | |||||
| ΔPMT1/PMT4 was lethal | |||||
| ANPA | X | Mycelial growth | Core-mannan structure of fungal-type galactomannan (FTGM) | Kadooka et al. (2022) | |
| Conidia formation | (1H-NMR spectroscopy) | ||||
| MNN9 | X | No discernible phenotype | Not involved in the synthesis of the FTGM α-core-mannan | Du et al. (2019); Kadooka et al. (2022) | |
| Apical growth and polarity | (1H-NMR spectroscopy) | ||||
| No significant role in the biosynthesis of N-glycans | |||||
| (MALDI-TOF MS) | |||||
| VAN1 | X | No discernible phenotype | Not involved in the synthesis of the FTGM α-core-mannan | Kadooka et al. (2022) | |
| (1H-NMR spectroscopy) | |||||
| KTR4 | O | Polarized growth | Polymerization galactomannan | Henry et al. (2019) | |
| Conidiation | (HPLC analysis) | ||||
| Conidial viability | |||||
| KTR7 | O | Polarized growth | Polymerization galactomannan | Henry et al. (2019) | |
| Conidiation | (HPLC analysis) | ||||
| Conidial viability | |||||
| CMSA | Not studied | Mycelial growth | Biosynthesis of the FTGM core-mannan structure | Onoue et al. (2018) | |
| sensitive to antifungal agents | (Proton nuclear magnetic resonance (1H-NMR) spectroscopy) | ||||
| CMSB | Not studied | Mycelial growth | Biosynthesis of the FTGM core-mannan structure | Onoue et al. (2018) | |
| sensitive to antifungal agents | (Proton nuclear magnetic resonance (1H-NMR) spectroscopy) | ||||
| MNT1 | O | Cell wall stability | Not studied | Wagener et al. (2008) | |
| MNN2 | Not studied | No discernible phenotype | ΔMNN2/MNN5 | Kadooka et al. (2024) | |
| ΔMNN2/MNN5 exhibited a growth defect and abnormal conidial formations | Biosynthesis of the outer chain like α-(1→6)-linked mannan | ||||
| (1H-NMR analysis) | |||||
| MNN5 | Not studied | No discernible phenotype | ΔMNN2/MNN5 | Kadooka et al. (2024) | |
| ΔMNN2/MNN5 exhibited a growth defect and abnormal conidial formations | Biosynthesis of the outer chain like α-(1→6)-linked mannan | ||||
| (1H-NMR analysis) | |||||
| STT3 | Not studied | Fungal growth | Not studied | Li et al. (2011) | |
| Cell wall integrity (CWI) | |||||
| GALF | O | Morphology and growth | Biosynthesis of the GalfMan6GlcNAc2 | Schmalhorst et al. (2008) | |
| Susceptible to drugs | (Four-capillary electrophoresis DNA sequencer) | ||||
| A. nidulans | ALG7 | Not studied | Failed to delete | Not studied | Gerhardt et al. (2025) |
| ALG6 (ALGF) | Not studied | Not studied | Not studied | Anyaogu et al. (2021); Gerhardt et al. (2025) | |
| AMS1 | X | No visible effect on growth or morphology | Not studied | Anyaogu et al. (2021); Eades et al. (1998) | |
| Recycling macromolecular components | |||||
| AN5748 | Not studied | Fungal growth | Not studied | Gerhardt et al. (2025) | |
| Sporulation | |||||
| Resistance to sorbitol and tunicamycin | |||||
| PMTA | Not studied | Fungal growth | Not studied | Oka et al. (2004) | |
| Cell wall formation | |||||
| ΔPMTA/PMTC lethal | |||||
| PMTB | Not studied | Conidiation | Not studied | Goto et al. (2009) | |
| Polarity maintenance | |||||
| ΔPMTB/PMTC lethal | |||||
| PMTC | Not studied | Fungal growth | Not studied | Goto et al. (2009) | |
| Cell wall integrity | |||||
| Osmotic stabilization | |||||
| ΔPMTA/PMTC, ΔPMTB/PMTC lethal | |||||
| ALG1 | Not studied | Failed to delete | Not studied | Gerhardt et al. (2025) | |
| ALG2 | Not studied | Fungal growth | Not studied | Gerhardt et al. (2025) | |
| Sporulation | |||||
| ALG11 | Not studied | Failed to delete | Not studied | Gerhardt et al. (2025) | |
| ALG3 (ALGC) | Not studied | Sensitive to tunicamycin and calcium stress | Biosynthesis of the Man5-7GlcNAc2 | Anyaogu et al. (2021); Gerhardt et al. (2025) | |
| (UHPLC-FLR-MS) | |||||
| ALG9 (ALGI) | Not studied | Sensitive to tunicamycin and calcium stress | Not studied | Anyaogu et al. (2021); Gerhardt et al. (2025) | |
| ALG12 (ALGL) | Not studied | Failed to delete | Not studied | Anyaogu et al. (2021); Gerhardt et al. (2025) | |
| ALG13 | Not studied | Failed to delete | Not studied | Gerhardt et al. (2025) | |
| C. albicans | CaCWH41 | O | Growth rates | Not studied | Mora-Montes et al. (2007) |
| Cell wall composition | |||||
| CaROT2 | o | Growth rates | Not studied | Mora-Montes et al. (2007) | |
| Cell wall composition | |||||
| CaMNS1 | O | Growth rates | Not studied | Mora-Montes et al. (2007) | |
| Cell wall composition | |||||
| CaPMT2 | O | Essential | Not studied | Prill et al. (2005) | |
| CaPMT4 | O | Fungal growth | Not studied | Prill et al. (2005) | |
| Morphogenesis | |||||
| Antifungal resistance. | |||||
| CaPMT5 | X | Fungal growth | Not studied | Prill et al. (2005) | |
| Morphogenesis | |||||
| Antifungal resistance. | |||||
| CaPMT1 | O (heterozygous)/ | Hyphal morphogenesis | Not studied | Eades et al. (1998); Timpel et al. (2000) | |
| X (homozygous) | Supersensitivity to the antifungal agents | ||||
| CaPMT6 | O | Morphogenesis | Not studied | Timpel et al. (2000) | |
| Antifungal sensitivities | |||||
| CaOCH1 | O | Temperature-sensitive growth | Biosynthesis of the N-glycan outer chain | Bates et al. (2006) | |
| Cellular aggregation | (ES-MS analysis, Gas chromatography-mass spectrometry) | ||||
| Host-fungal interaction | |||||
| CaMNT1 | O | Adhesion | Biosynthesis of the second mannose to O-glycan | Buurman et al. (1998) | |
| (Biogel-P4 chromatography) | |||||
| CaMNN5 | O | Hyphal growth | Biosynthesis of the N-linked mannan branches | Bai et al. (2006) | |
| Iron homeostasis | (Thin-layer chromatography and TLC plate to autoradiography) | ||||
| Cell wall integrity | |||||
| Morphogenesis | |||||
| CaMNT4 | Not studied | No discernible phenotype | Not studied | Mora-Montes et al. (2010) | |
| ΔMNT3/MNT4/MNT5 exhibited severe growth defect | |||||
| ΔMNT4/MNT5, ΔMNT3/MNT4/MNT5 altered cell wall composition | |||||
| CaMNT5 | O (ΔMNT3/MNT5) | No discernible phenotype | Not studied | Mora-Montes et al. (2010) | |
| ΔMNT3/MNT4/MNT5 exhibited severe growth defect | |||||
| ΔMNT4/MNT5, ΔMNT3/MNT4/MNT5 altered cell wall composition | |||||
| CaMNT3 | O (ΔMNT3/MNT5) | No discernible phenotype | Not studied | Mora-Montes et al. (2010) | |
| ΔMNT3/MNT5, ΔMNT3/MNT4/MNT5 exhibited severe growth defect | |||||
| ΔMNT3/MNT5, ΔMNT4/MNT5, ΔMNT3/MNT4/MNT5 altered cell wall composition | |||||
| C. neoformans | MNS1 | (ΔMNS1/MNS101) | Sensitive to ER stress (tunicamycin, DTT) | Remove mannose from GlcNAc2Man9 to GlcNAc2Man8 | Mota et al. (2025) |
| Sensitive to ER stress cell wall integrity stress | (HPLC and MALDI-TOF) | ||||
| ΔMNS1/MNS101 growth defect | |||||
| MNS101 | (ΔMNS1/MNS101) | Sensitive to ER stress (tunicamycin, DTT) | Remove mannose from (> M10) glycan or M8 further trimming | Mota et al. (2025) | |
| Sensitive to ER stress cell wall integrity stress | (HPLC and MALDI-TOF) | ||||
| ΔMNS1/MNS101 growth defect | |||||
| MNL1 | X | No discernible phenotype | Involved in targeting misfolded proteins for ERAD | Mota et al. (2025) | |
| rather than in normal N-glycan processing | |||||
| (HPLC, MALDI-TOF) | |||||
| MNL2 | X | No discernible phenotype | Involved in targeting misfolded proteins for ERAD | Mota et al. (2025) | |
| rather than in normal N-glycan processing | |||||
| (HPLC, MALDI-TOF) | |||||
| PMT4 | O | Fungal growth | Not studied | Olson et al. (2007); Willger et al. (2009) | |
| Cell wall integrity | |||||
| Cell morphology | |||||
| PMT2 | O | Essential | Not studied | Willger et al. (2009) | |
| PMT1 | O | Cell morphology and integrity | Not studied | Willger et al. (2009) | |
| ΔPMT1/PMT4 is synthetically lethal, | |||||
| ALG3 | O | Macrophage cell death | Biosynthesis of the Dol-PP-GlcNAc2Man6 | Thak et al. (2020) | |
| (HPLC, MALDI-TOF) | |||||
| OCH1 | Slightly attenuated, | No discernible phenotype | Addition of a single α1,6-linked mannose residue to the Man8GlcNAc2 core | Park et al. (2012) | |
| not critical | (HPLC, MALDI-TOF) | ||||
| ALG9 | O | Sensitive to SDS, fluconazole | Biosynthesis of the Dol-PP-GlcNAc2Man7 | Thak et al. (2020) | |
| (HPLC, MALDI-TOF) | |||||
| MNN2 | Not studied | No discernible phenotype | Biosynthesis of the elongated outer chain N-glycan | Park et al. (2012) | |
| (HPLC, MALDI-TOF) | |||||
| KTR3 | Not studied | Cell wall stability | Not involved in the processing of N-glycans (M6–10, X1M6–10) | Park et al. (2012) | |
| (HPLC, MALDI-TOF) |
| Species | Gene | Description | Phenotypic defect(s) | Reference |
|---|---|---|---|---|
| B. cinerea | bcsun1 | Member of the β-glucosidase SUN family | Fungal morphogenesis | Pérez-Hernández et al. (2017) |
| (secreted glycoprotein) | Cell Wall Integrity | |||
| Reproductive structures formation | ||||
| ROS sensitivity | ||||
| bcpg1 | Endopolygalacturonase | Studied only for virulence | González et al. (2014); ten Have et al. (1998) | |
| bclysm1 | Lysin motif domains | Protects hyphae against degradation by external chitinases | Crumière et al. (2025) | |
| Prevent them from inducing ROS | ||||
| Infection initiation | ||||
| Adhesion to host | ||||
| C. graminicola | Cgcnx1 | ER chaperone | (Site directed mutagenesis) | Mei et al. (2023) |
| Vegetative growth | ||||
| Effector stability and secretion | ||||
| F. graminearum | CFEMN1 | Contain a CFEM domain | Interact with extracellular binding | Zuo et al. (2022) |
| proteins from host | ||||
| TUB2 | β2-tubulin | Vegetative growth | Liu et al. (2013); | |
| Sensitive to carbendazim | Zhao et al. (2014) | |||
| ADE5 | Phosphoribosylamine-glycine ligase | Adenine auxotrophy | Kim et al. (2007) | |
| Vegetative growth | ||||
| Sexual reproduction | ||||
| CHS7 | Chitin synthase | Vegetative growth | Kim et al. (2009) | |
| Septa formation | ||||
| Perithecia formation | ||||
| CHS5 | Chitin synthase | Vegetative growth | Kim et al. (2009) | |
| Septa formation | ||||
| Perithecia formation | ||||
| VPS74 | Vacuolar protein sorting | Vegetative growth | Kim et al. (2015b) | |
| Conidiation | ||||
| Sexual development | ||||
| Mycotoxin production | ||||
| SYN2 | Syntaxin-like SNARE genes | Self and female fertility | Hong et al. (2010) | |
| Localized in plasma membranes and septa | ||||
| ERG9 | Ergosterol biosynthesis | Essential | Yun et al. (2014) | |
| PRB1 | Subtilisin-like protease belonging to proteinase K-like subfamily | Mycotoxin production | Xu et al. (2020a) | |
| Responses to environmental stimuli | ||||
| Lipid metabolism | ||||
| Autophagy regulation | ||||
| ATG27 | Autophagy-related genes | Vegetative growth | Lv et al. (2017) | |
| Sporulation | ||||
| Mycotoxin production | ||||
| Autophagy regulation | ||||
| ILV6 | Acetohydroxyacid synthase | BCAA-auxotroph | Liu et al. (2015) | |
| Vegetative growth | ||||
| Pigmentation | ||||
| Mycotoxin production | ||||
| ILV2 | Acetohydroxyacid synthase | BCAA-auxotroph | Liu et al. (2015) | |
| Vegetative growth | ||||
| Conidial formation | ||||
| Pigmentation | ||||
| Mycotoxin production | ||||
| GPB1 | G protein | Mycotoxin production | Yu et al. (2008) | |
| Chitin accumulation | ||||
| RAB11 | Ras-related proteins in brain | Polarized growth and/or exocytosis | Zheng et al. (2015) | |
| KAR | Hsp70s | Essential | Liu et al. (2017) | |
| SSC | Hsp70s | Essential | Liu et al. (2017) | |
| SSB | Hsp70s | Proper folding of β2-tubulin | Liu et al. (2017) | |
| Vegetative growth | ||||
| Low temperature response | ||||
| Vacuole fusion and endocytosis | ||||
| Mycotoxin production | ||||
| SSA | Hsp70s | Essential | Liu et al. (2017) | |
| CAP1 | Cyclase-associated protein | Vegetative growth | Yin et al. (2018b) | |
| Conidiogenesis | ||||
| Mycotoxin production | ||||
| KATG2 /FCA7 | peroxidase | (Site directed mutagenesis) | Guo et al. (2019); | |
| Scavenges ROS | Lee et al. (2018) | |||
| Located on the cell wall of invading hyphal cells | ||||
| ECM33 | GPI-anchored protein | Cell wall morphology | Fernando et al. (2019) | |
| PP2A | Phosphatase | Essential | Yu et al. (2014) | |
| STE7 | kinase | Vegetative growth | Gu et al. (2015) | |
| Conidiation | ||||
| Mycotoxin production | ||||
| Penetration | ||||
| PHO8 | Phosphatase | Essential | Yun et al. (2015) | |
| CNA1 | Phosphatase | Essential | Yun et al. (2015) | |
| Fg07304 | Phosphatase | Essential | Yun et al. (2015) | |
| GIC1 | Phosphatase | Conidiation | Yun et al. (2015) | |
| PSR2 | Phosphatase | Vegetative growth | Yun et al. (2015) | |
| Pigmentation | ||||
| Conidia morphology | ||||
| ARC15 | Phosphatase | Only defects in virulence | Yun et al. (2015) | |
| GLX | glyoxal oxidase | Mycotoxin production | Song et al. (2016) | |
| localized to cell membrane | ||||
| ARB1 | ATP-binding protein | Infective growth | Yin et al. (2018a) | |
| Oxidative stresses | ||||
| Cell wall integrity | ||||
| Mycotoxin production | ||||
| Sexual and asexual development | ||||
| SKP1 | E3 ubiquitin ligases | Essential | Chen et al. (2023) | |
| LIP50, TAG | Lipases | Only defects in virulence | Kim et al. (2023); Zhang et al. (2016) | |
| PCT1 | Cytidylyltransferases | Essential | Wang et al. (2019) | |
| FGSG_10825 | Mating-type | Sexual development | Kim et al. (2015a) | |
| OB031, HEX1 | TF | Only defects in virulence | Son et al. (2011) | |
| CMK1 | Kinase | Ascospore formation | Wang et al. (2011) | |
| ALDH (FGSG_02273) | Aldehyde Dehydrogenase | Essential | Tang et al. (2023) | |
| ALDH (FGSG_04194) | Aldehyde Dehydrogenase | Regulating acetaldehyde dehydrogenase activity | Tang et al. (2023) | |
| Accumulation of lipid droplets | ||||
| Conidial germination | ||||
| CWM1 | Cell wall mannoprotein | Vegetative growth | Zhang et al. (2019a) | |
| Cell wall integrity | ||||
| L. theobromae | LtScp1 | Effectors, a LysM-containing protein | (Site directed mutagenesis) | Peng et al. (2022) |
| Interacted with chitinase VvChi4 | ||||
| M. oryzae | CNX1 | Calnexin | Mycelial growth | Chen et al. (2020) |
| Conidiation | ||||
| Invasive hyphal growth | ||||
| GTB1 | Glucosidase II β-subunit Gas2 | Mycelial growth | Chen et al. (2020) | |
| Conidiation | ||||
| Invasive hyphal growth | ||||
| SLP1 | Secreted LysM domain protein | (Site directed mutagenesis) | Chen et al. (2014); Jones et al. (2021) | |
| Sequesters chitin oligosaccharides | ||||
| Apoplastic effectors | ||||
| BAS4 | Biotrophy-associated secreted protein 4 | Apoplastic effectors | Chen et al. (2014); Jones et al. (2021) | |
| GPI7 | Glycosylphosphatidylinositol | Penetration and invasive growth | Liu et al. (2020) | |
| Cell wall biogenesis | ||||
| P. capsici | Pcipg2 | Polygalacturonase | Studied only for virulence | Sun et al. (2009) |
| P. sojae | GPI16 | GPI transamidase component protein | (Site directed mutagenesis) | Zhang et al. (2021) |
| Cyst germination | ||||
| Oospore production | ||||
| A. fumigatus | GP56 | Major antigen/allergen with a molecular weight of 56 kD | Studied only for virulence | Nigam et al. (2003) |
| C. albicans | CaHWP1 | Hyphal wall protein 1 | Positive regulators of hyphal development | Sharkey et al. (1999); Staab et al. (2013) |
| CaALS1 | Agglutinin-like sequence | Studied only for virulence | Hoyer et al. (2008); Kamai et al. (2002) | |
| cell-surface glycoproteins | ||||
| CaALS3 | Agglutinin-like sequence | Studied only for virulence | Hoyer et al. (2008); Zhao et al. (2004) | |
| cell-surface glycoproteins | ||||
| CaALS2 | Agglutinin-like sequence | Studied only for virulence | Hoyer et al. (2008); Zhao et al. (2005) | |
| cell-surface glycoproteins | ||||
| CaMP65 | Putative β-glucanase mannoprotein | Hyphal morphogenesis | Sandini et al. (2007) | |
| Fungal cell adherence | ||||
| C. neoformans | PLB1 | Glycoproteins phospholipase | Intracellular infection | Evans et al. (2015); Thak et al. (2020) |
| Cell body morphology | ||||
| MP65 | Immunodominant 65-kDa-MP antigen | Studied only for virulence | Pietrella et al. (2002) | |
| CIG1 | Extracellular mannoprotein | Iron acquisition | Cadieux et al. (2013) | |
| Growth on heme | ||||
| MP84 | Mannoprotein | Not studied | Teixeira et al. (2014) | |
| CMP1 | Cryptococcus mannoprotein 1 | Capsule formation | Han et al. (2020) | |
| Localized in the vacuole |
| Species | Gene | Type | Description | Regulated genes | Direct binding | Reference |
|---|---|---|---|---|---|---|
| C. albicans | CaACE2 | Zinc-finger | RAM (regulation of ACE2 TF and polarized morphogenesis) signaling network | PMTs | Not studied | |
| B. cinerea | BcFTG1 | Zinc-finger | fungal TF containing the GAL4 domain | ALG8 | Not studied | |
| H. polymorpha | HpHAC1 | bZIP | Major unfolded protein response (UPR) | ALG5, MNN2, MNN4, KTR1, OST1,OST2, OST4, OCR5, SWP1, WBP1 | Not studied | |
| A. niger | hacA | bZIP | Major unfolded protein response (UPR) | ALG6, ALG8, ALG2, ALG3, DPM1,DPM2, ALG5, ALG7, RFT1, ALG9, SEC59, ALG12, ALG10, OST1, WBP1,OST2, OST3, SST3 | Not studied | |
| C. neoformans | HXL1 | bZIP | HAC1, XBP1-like gene 1 | UPR genes (WBP1, PMT1, PMT2, PMT4, WBP1, ALG7, OST1) | Not studied | |
| Mediate the unfolded protein response (UPR) pathway | ||||||
| M. robertsii | MrpacC | C2H2-type zinc-finger | pH-responsive TF | STT3, OST3, PMT4 | STT3, OST3, PMT4 | |
| M. acridum | MaSte12 | C2H2-type zinc-finger | Direct target and functions downstream of the mitogen-activated protein kinase (MAPK) Fus3/Kss1 | OCH1 | Not studied |
| Species | Gene | Virulence (O = affected; X = no effect) | Biological function(s) | Glycan structure | Reference |
|---|---|---|---|---|---|
| B. cinerea | bcpmt1 | O | Morphogenesis | Not studied | González et al. ( |
| Fungal adherence | |||||
| Cell wall integrity | |||||
| bcpmt2 | O | Morphogenesis | Not studied | González et al. ( |
|
| Fungal adherence | |||||
| Cell wall integrity | |||||
| bcpmt4 | O | Morphogenesis | Not studied | González et al. ( |
|
| Fungal adherence | |||||
| Cell wall integrity | |||||
| C. graminicola | Cgalg3 | O | ER homeostasis | Not studied | |
| Fungal growth | |||||
| F. graminearum | RFT1 | O | Mycotoxin synthesis | Not studied | |
| Vegetative growth | |||||
| Conidiation | |||||
| Sexual development | |||||
| CWH41 (MOGS) | X | Mycotoxin synthesis | Not studied | ||
| Conidiation | |||||
| Sexual development | |||||
| ROT2 (GLS2, GANAB) | X | 6 orthologs showed different phenotypes | Not studied | ||
| Mycotoxin synthesis | |||||
| Vegetative growth | |||||
| Conidiation | |||||
| Sexual development | |||||
| ALG5 | O | Vegetative growth | Not studied | ||
| Sexual development | |||||
| ALG6 | O | Vegetative growth | Not studied | ||
| Sexual development | |||||
| ALG8 | O | Mycotoxin synthesis | Not studied | ||
| Vegetative growth | |||||
| Sexual development | |||||
| PSA1 (MPG) | O | Mycotoxin synthesis | Not studied | ||
| Vegetative growth | |||||
| Conidiation | |||||
| Sexual development | |||||
| MNS1 (MAN1B) | O | 2 orthologs showed different phenotypes | Not studied | ||
| Mycotoxin synthesis | |||||
| Conidiation | |||||
| MNL2 (MAN1A) | O | 4 orthologs showed different phenotypes | Not studied | ||
| Mycotoxin synthesis | |||||
| Vegetative growth | |||||
| Conidiation | |||||
| PMT1, 5, 7 | O | Vegetative growth | Not studied | ||
| Conidiation | |||||
| Sexual development | |||||
| MNN14 | X | Mycotoxin synthesis | Not studied | ||
| Vegetative growth | |||||
| Conidiation | |||||
| ALG1 | X | Vegetative growth | Not studied | ||
| ALG11 | O | Mycotoxin synthesis | Not studied | ||
| Vegetative growth | |||||
| Conidiation | |||||
| Sexual development | |||||
| ALG12 | O | Vegetative growth | Biosynthesis of the Dol-PP-GlcNAc2Man8 (HPLC) | ||
| Sexual development | |||||
| ALG2 | o | Mycotoxin synthesis | Not studied | ||
| Vegetative growth | |||||
| Conidiation | |||||
| Sexual development | |||||
| ALG3 | O | Mycotoxin synthesis | Biosynthesis of the Dol-PP-GlcNAc2Man6 (HPLC) | ||
| Vegetative growth | |||||
| Conidiation | |||||
| Sexual development | |||||
| ALG9 | X | Mycotoxin synthesis | Not studied | ||
| Vegetative growth | |||||
| HOC1 | O | Mycotoxin synthesis | Not studied | ||
| OCH1 | O | Mycotoxin synthesis | Not studied | ||
| Vegetative growth | |||||
| Conidiation | |||||
| KTR5, KTR7 | O | Mycotoxin synthesis | Not studied | ||
| Vegetative growth | |||||
| Conidiation | |||||
| Sexual development | |||||
| KTR4 | O | Vegetative growth | Not studied | ||
| Conidiation | |||||
| KRE2, KTR1, 2, 3, 6 | X | Mycotoxin synthesis | Not studied | ||
| Vegetative growth | |||||
| Sexual development | |||||
| MNT4 | X | Mycotoxin synthesis | Not studied | ||
| Conidiation | |||||
| MNN1, MNT3 | X | Mycotoxin synthesis | Not studied | ||
| MNN10 | X | Conidiation | Not studied | ||
| Sexual development | |||||
| MNN11 | X | Mycotoxin synthesis | Not studied | ||
| Vegetative growth | |||||
| Conidiation | |||||
| Sexual development | |||||
| MNN2, 5 | X | Conidiation | Not studied | ||
| MNN4 | O | Mycotoxin synthesis | Not studied | ||
| Vegetative growth | |||||
| VAN1 | X | Mycotoxin synthesis | Not studied | ||
| Vegetative growth | |||||
| Sexual development | |||||
| ANP1 | O | Mycotoxin synthesis | Not studied | ||
| Vegetative growth | |||||
| Conidiation | |||||
| Sexual development | |||||
| MNN9 | O | Vegetative growth | Not studied | ||
| Sexual development | |||||
| STT3 | O | Not changed | Not studied | ||
| SWP1 | X | Conidiation | Not studied | ||
| WBP1 | O | Mycotoxin synthesis | Not studied | ||
| Vegetative growth | |||||
| Conidiation | |||||
| F. oxysporum | OCH1 | O | Fungal growth | Not studied | |
| Cell wall integrity | |||||
| hyphal adhesion | |||||
| GNT2 | O | Conidium size and morphology | Biosynthesis of the Galactofuranose chains | ||
| Oxidative stress resistance | (size-exclusion chromatography with Diffusion Ordered Spectroscopy (DOSY)) | ||||
| cell wall organization, biogenesis and remodelling hyphal fusion | |||||
| Secretion of trafficking vesicles | |||||
| F. oxysporum f. sp. cucumerinum | PMT1 | O | Fungal growth | Not studied | |
| Cell wall integrity | |||||
| Conidiation | |||||
| PMT2 | O | Fungal growth | Not studied | ||
| Cell wall integrity | |||||
| Conidiation | |||||
| PMT4 | O | Fungal growth | Not studied | ||
| Cell wall integrity | |||||
| Conidiation | |||||
| M. graminicola | MgAlg2 | O | Cell wall integrity | Biosynthesis of the (GlcNAc)2M3 | |
| Yeast-like to filamentous growth switch | (MALDI-ToF-MS) | ||||
| M. oryzae | GLS1 | O | Mycelial growth | Not studied | |
| Conidiation | |||||
| Invasive hyphal growth | |||||
| GLS2 | O | Mycelial growth | Not studied | ||
| Conidiation | |||||
| Invasive hyphal growth | |||||
| GTB1 | O | Mycelial growth | Not studied | ||
| Conidiation | |||||
| Invasive hyphal growth | |||||
| ALG3 | O | Mycelial growth | Not studied | ||
| Conidiation | |||||
| Invasive growth | |||||
| Oxidative stress resistance | |||||
| PMT2 | O | Fungal adhesion | Not studied | ||
| Conidial germination | |||||
| cell wall integrity | |||||
| Invasive hyphae growth | |||||
| PMT4 | O | Hyphal growth | Not studied | ||
| Conidiation | |||||
| Penetration and biotrophic invasion | |||||
| ALG9 | O | Conidial production | Not studied | ||
| Appressorium formation | |||||
| Responses to stressors | |||||
| P. capsici | PcSTT3B | O | Vegetative growth | Not studied | |
| Sporangial release rate | |||||
| Zoospore production | |||||
| P. digitatum | pdpmt2 | O | Cell wall integrity | Not studied | |
| Conidiogenesis | |||||
| Sensitivity to fungicide | |||||
| U. maydis | gls1 | O | Initial stages of biotrophic growth | Not studied | |
| gas1 | O | Intracellular expending | Not studied | ||
| gas2 | O | Intracellular expending | Not studied | ||
| pmt4 | O | Appressorium formation | Not studied | ||
| Plant cuticle penetration | |||||
| V. dahliae | VdOCH1 | O | Hyphal growth | Not studied | |
| Conidia production | |||||
| Microsclerotia formation | |||||
| Cell wall integrity | |||||
| VdSTT3 | O | Fungal development | Not studied | ||
| Hyphal growth | |||||
| Glycoprotein secretion | |||||
| A. fumigatus | CWH41 | X | Cell wall integrity (CWI) | Not studied | |
| Polarity | |||||
| Septation | |||||
| Conidiation | |||||
| AMS1 | Not studied | Conidial formation | Not studied | ||
| Polarity | |||||
| Septation | |||||
| OCH1 | O | Sporulation | Biosynthesis of the Outer glycan chain | ||
| (Capillary electrophoresis DNA Sequencer) | |||||
| PMT1 | X | No discernible phenotype | Not studied | ||
| ΔPMT1/PMT4 was lethal | |||||
| PMT2 | O | Essential | Not studied | ||
| PMT4 | X | Mycelial growth | Not studied | ||
| Conidiation | |||||
| Sensitivity to echinocandins | |||||
| ΔPMT1/PMT4 was lethal | |||||
| ANPA | X | Mycelial growth | Core-mannan structure of fungal-type galactomannan (FTGM) | ||
| Conidia formation | (1H-NMR spectroscopy) | ||||
| MNN9 | X | No discernible phenotype | Not involved in the synthesis of the FTGM α-core-mannan | ||
| Apical growth and polarity | (1H-NMR spectroscopy) | ||||
| No significant role in the biosynthesis of N-glycans | |||||
| (MALDI-TOF MS) | |||||
| VAN1 | X | No discernible phenotype | Not involved in the synthesis of the FTGM α-core-mannan | ||
| (1H-NMR spectroscopy) | |||||
| KTR4 | O | Polarized growth | Polymerization galactomannan | ||
| Conidiation | (HPLC analysis) | ||||
| Conidial viability | |||||
| KTR7 | O | Polarized growth | Polymerization galactomannan | ||
| Conidiation | (HPLC analysis) | ||||
| Conidial viability | |||||
| CMSA | Not studied | Mycelial growth | Biosynthesis of the FTGM core-mannan structure | ||
| sensitive to antifungal agents | (Proton nuclear magnetic resonance (1H-NMR) spectroscopy) | ||||
| CMSB | Not studied | Mycelial growth | Biosynthesis of the FTGM core-mannan structure | ||
| sensitive to antifungal agents | (Proton nuclear magnetic resonance (1H-NMR) spectroscopy) | ||||
| MNT1 | O | Cell wall stability | Not studied | ||
| MNN2 | Not studied | No discernible phenotype | ΔMNN2/MNN5 | ||
| ΔMNN2/MNN5 exhibited a growth defect and abnormal conidial formations | Biosynthesis of the outer chain like α-(1→6)-linked mannan | ||||
| (1H-NMR analysis) | |||||
| MNN5 | Not studied | No discernible phenotype | ΔMNN2/MNN5 | ||
| ΔMNN2/MNN5 exhibited a growth defect and abnormal conidial formations | Biosynthesis of the outer chain like α-(1→6)-linked mannan | ||||
| (1H-NMR analysis) | |||||
| STT3 | Not studied | Fungal growth | Not studied | ||
| Cell wall integrity (CWI) | |||||
| GALF | O | Morphology and growth | Biosynthesis of the GalfMan6GlcNAc2 | ||
| Susceptible to drugs | (Four-capillary electrophoresis DNA sequencer) | ||||
| A. nidulans | ALG7 | Not studied | Failed to delete | Not studied | |
| ALG6 (ALGF) | Not studied | Not studied | Not studied | ||
| AMS1 | X | No visible effect on growth or morphology | Not studied | ||
| Recycling macromolecular components | |||||
| AN5748 | Not studied | Fungal growth | Not studied | ||
| Sporulation | |||||
| Resistance to sorbitol and tunicamycin | |||||
| PMTA | Not studied | Fungal growth | Not studied | ||
| Cell wall formation | |||||
| ΔPMTA/PMTC lethal | |||||
| PMTB | Not studied | Conidiation | Not studied | ||
| Polarity maintenance | |||||
| ΔPMTB/PMTC lethal | |||||
| PMTC | Not studied | Fungal growth | Not studied | ||
| Cell wall integrity | |||||
| Osmotic stabilization | |||||
| ΔPMTA/PMTC, ΔPMTB/PMTC lethal | |||||
| ALG1 | Not studied | Failed to delete | Not studied | ||
| ALG2 | Not studied | Fungal growth | Not studied | ||
| Sporulation | |||||
| ALG11 | Not studied | Failed to delete | Not studied | ||
| ALG3 (ALGC) | Not studied | Sensitive to tunicamycin and calcium stress | Biosynthesis of the Man5-7GlcNAc2 | ||
| (UHPLC-FLR-MS) | |||||
| ALG9 (ALGI) | Not studied | Sensitive to tunicamycin and calcium stress | Not studied | ||
| ALG12 (ALGL) | Not studied | Failed to delete | Not studied | ||
| ALG13 | Not studied | Failed to delete | Not studied | ||
| C. albicans | CaCWH41 | O | Growth rates | Not studied | |
| Cell wall composition | |||||
| CaROT2 | o | Growth rates | Not studied | ||
| Cell wall composition | |||||
| CaMNS1 | O | Growth rates | Not studied | ||
| Cell wall composition | |||||
| CaPMT2 | O | Essential | Not studied | ||
| CaPMT4 | O | Fungal growth | Not studied | ||
| Morphogenesis | |||||
| Antifungal resistance. | |||||
| CaPMT5 | X | Fungal growth | Not studied | ||
| Morphogenesis | |||||
| Antifungal resistance. | |||||
| CaPMT1 | O (heterozygous)/ | Hyphal morphogenesis | Not studied | ||
| X (homozygous) | Supersensitivity to the antifungal agents | ||||
| CaPMT6 | O | Morphogenesis | Not studied | ||
| Antifungal sensitivities | |||||
| CaOCH1 | O | Temperature-sensitive growth | Biosynthesis of the N-glycan outer chain | ||
| Cellular aggregation | (ES-MS analysis, Gas chromatography-mass spectrometry) | ||||
| Host-fungal interaction | |||||
| CaMNT1 | O | Adhesion | Biosynthesis of the second mannose to O-glycan | ||
| (Biogel-P4 chromatography) | |||||
| CaMNN5 | O | Hyphal growth | Biosynthesis of the N-linked mannan branches | ||
| Iron homeostasis | (Thin-layer chromatography and TLC plate to autoradiography) | ||||
| Cell wall integrity | |||||
| Morphogenesis | |||||
| CaMNT4 | Not studied | No discernible phenotype | Not studied | ||
| ΔMNT3/MNT4/MNT5 exhibited severe growth defect | |||||
| ΔMNT4/MNT5, ΔMNT3/MNT4/MNT5 altered cell wall composition | |||||
| CaMNT5 | O (ΔMNT3/MNT5) | No discernible phenotype | Not studied | ||
| ΔMNT3/MNT4/MNT5 exhibited severe growth defect | |||||
| ΔMNT4/MNT5, ΔMNT3/MNT4/MNT5 altered cell wall composition | |||||
| CaMNT3 | O (ΔMNT3/MNT5) | No discernible phenotype | Not studied | ||
| ΔMNT3/MNT5, ΔMNT3/MNT4/MNT5 exhibited severe growth defect | |||||
| ΔMNT3/MNT5, ΔMNT4/MNT5, ΔMNT3/MNT4/MNT5 altered cell wall composition | |||||
| C. neoformans | MNS1 | (ΔMNS1/MNS101) | Sensitive to ER stress (tunicamycin, DTT) | Remove mannose from GlcNAc2Man9 to GlcNAc2Man8 | |
| Sensitive to ER stress cell wall integrity stress | (HPLC and MALDI-TOF) | ||||
| ΔMNS1/MNS101 growth defect | |||||
| MNS101 | (ΔMNS1/MNS101) | Sensitive to ER stress (tunicamycin, DTT) | Remove mannose from (> M10) glycan or M8 further trimming | ||
| Sensitive to ER stress cell wall integrity stress | (HPLC and MALDI-TOF) | ||||
| ΔMNS1/MNS101 growth defect | |||||
| MNL1 | X | No discernible phenotype | Involved in targeting misfolded proteins for ERAD | ||
| rather than in normal N-glycan processing | |||||
| (HPLC, MALDI-TOF) | |||||
| MNL2 | X | No discernible phenotype | Involved in targeting misfolded proteins for ERAD | ||
| rather than in normal N-glycan processing | |||||
| (HPLC, MALDI-TOF) | |||||
| PMT4 | O | Fungal growth | Not studied | ||
| Cell wall integrity | |||||
| Cell morphology | |||||
| PMT2 | O | Essential | Not studied | ||
| PMT1 | O | Cell morphology and integrity | Not studied | ||
| ΔPMT1/PMT4 is synthetically lethal, | |||||
| ALG3 | O | Macrophage cell death | Biosynthesis of the Dol-PP-GlcNAc2Man6 | ||
| (HPLC, MALDI-TOF) | |||||
| OCH1 | Slightly attenuated, | No discernible phenotype | Addition of a single α1,6-linked mannose residue to the Man8GlcNAc2 core | ||
| not critical | (HPLC, MALDI-TOF) | ||||
| ALG9 | O | Sensitive to SDS, fluconazole | Biosynthesis of the Dol-PP-GlcNAc2Man7 | ||
| (HPLC, MALDI-TOF) | |||||
| MNN2 | Not studied | No discernible phenotype | Biosynthesis of the elongated outer chain N-glycan | ||
| (HPLC, MALDI-TOF) | |||||
| KTR3 | Not studied | Cell wall stability | Not involved in the processing of N-glycans (M6–10, X1M6–10) | ||
| (HPLC, MALDI-TOF) |
| Species | Gene | Description | Phenotypic defect(s) | Reference |
|---|---|---|---|---|
| B. cinerea | bcsun1 | Member of the β-glucosidase SUN family | Fungal morphogenesis | |
| (secreted glycoprotein) | Cell Wall Integrity | |||
| Reproductive structures formation | ||||
| ROS sensitivity | ||||
| bcpg1 | Endopolygalacturonase | Studied only for virulence | ||
| bclysm1 | Lysin motif domains | Protects hyphae against degradation by external chitinases | ||
| Prevent them from inducing ROS | ||||
| Infection initiation | ||||
| Adhesion to host | ||||
| C. graminicola | Cgcnx1 | ER chaperone | (Site directed mutagenesis) | |
| Vegetative growth | ||||
| Effector stability and secretion | ||||
| F. graminearum | CFEMN1 | Contain a CFEM domain | Interact with extracellular binding | |
| proteins from host | ||||
| TUB2 | β2-tubulin | Vegetative growth | ||
| Sensitive to carbendazim | ||||
| ADE5 | Phosphoribosylamine-glycine ligase | Adenine auxotrophy | ||
| Vegetative growth | ||||
| Sexual reproduction | ||||
| CHS7 | Chitin synthase | Vegetative growth | ||
| Septa formation | ||||
| Perithecia formation | ||||
| CHS5 | Chitin synthase | Vegetative growth | ||
| Septa formation | ||||
| Perithecia formation | ||||
| VPS74 | Vacuolar protein sorting | Vegetative growth | ||
| Conidiation | ||||
| Sexual development | ||||
| Mycotoxin production | ||||
| SYN2 | Syntaxin-like SNARE genes | Self and female fertility | ||
| Localized in plasma membranes and septa | ||||
| ERG9 | Ergosterol biosynthesis | Essential | ||
| PRB1 | Subtilisin-like protease belonging to proteinase K-like subfamily | Mycotoxin production | ||
| Responses to environmental stimuli | ||||
| Lipid metabolism | ||||
| Autophagy regulation | ||||
| ATG27 | Autophagy-related genes | Vegetative growth | ||
| Sporulation | ||||
| Mycotoxin production | ||||
| Autophagy regulation | ||||
| ILV6 | Acetohydroxyacid synthase | BCAA-auxotroph | ||
| Vegetative growth | ||||
| Pigmentation | ||||
| Mycotoxin production | ||||
| ILV2 | Acetohydroxyacid synthase | BCAA-auxotroph | ||
| Vegetative growth | ||||
| Conidial formation | ||||
| Pigmentation | ||||
| Mycotoxin production | ||||
| GPB1 | G protein | Mycotoxin production | ||
| Chitin accumulation | ||||
| RAB11 | Ras-related proteins in brain | Polarized growth and/or exocytosis | ||
| KAR | Hsp70s | Essential | ||
| SSC | Hsp70s | Essential | ||
| SSB | Hsp70s | Proper folding of β2-tubulin | ||
| Vegetative growth | ||||
| Low temperature response | ||||
| Vacuole fusion and endocytosis | ||||
| Mycotoxin production | ||||
| SSA | Hsp70s | Essential | ||
| CAP1 | Cyclase-associated protein | Vegetative growth | ||
| Conidiogenesis | ||||
| Mycotoxin production | ||||
| KATG2 /FCA7 | peroxidase | (Site directed mutagenesis) | ||
| Scavenges ROS | ||||
| Located on the cell wall of invading hyphal cells | ||||
| ECM33 | GPI-anchored protein | Cell wall morphology | ||
| PP2A | Phosphatase | Essential | ||
| STE7 | kinase | Vegetative growth | ||
| Conidiation | ||||
| Mycotoxin production | ||||
| Penetration | ||||
| PHO8 | Phosphatase | Essential | ||
| CNA1 | Phosphatase | Essential | ||
| Fg07304 | Phosphatase | Essential | ||
| GIC1 | Phosphatase | Conidiation | ||
| PSR2 | Phosphatase | Vegetative growth | ||
| Pigmentation | ||||
| Conidia morphology | ||||
| ARC15 | Phosphatase | Only defects in virulence | ||
| GLX | glyoxal oxidase | Mycotoxin production | ||
| localized to cell membrane | ||||
| ARB1 | ATP-binding protein | Infective growth | ||
| Oxidative stresses | ||||
| Cell wall integrity | ||||
| Mycotoxin production | ||||
| Sexual and asexual development | ||||
| SKP1 | E3 ubiquitin ligases | Essential | ||
| LIP50, TAG | Lipases | Only defects in virulence | ||
| PCT1 | Cytidylyltransferases | Essential | ||
| FGSG_10825 | Mating-type | Sexual development | ||
| OB031, HEX1 | TF | Only defects in virulence | ||
| CMK1 | Kinase | Ascospore formation | ||
| ALDH (FGSG_02273) | Aldehyde Dehydrogenase | Essential | ||
| ALDH (FGSG_04194) | Aldehyde Dehydrogenase | Regulating acetaldehyde dehydrogenase activity | ||
| Accumulation of lipid droplets | ||||
| Conidial germination | ||||
| CWM1 | Cell wall mannoprotein | Vegetative growth | ||
| Cell wall integrity | ||||
| L. theobromae | LtScp1 | Effectors, a LysM-containing protein | (Site directed mutagenesis) | |
| Interacted with chitinase VvChi4 | ||||
| M. oryzae | CNX1 | Calnexin | Mycelial growth | |
| Conidiation | ||||
| Invasive hyphal growth | ||||
| GTB1 | Glucosidase II β-subunit Gas2 | Mycelial growth | ||
| Conidiation | ||||
| Invasive hyphal growth | ||||
| SLP1 | Secreted LysM domain protein | (Site directed mutagenesis) | ||
| Sequesters chitin oligosaccharides | ||||
| Apoplastic effectors | ||||
| BAS4 | Biotrophy-associated secreted protein 4 | Apoplastic effectors | ||
| GPI7 | Glycosylphosphatidylinositol | Penetration and invasive growth | ||
| Cell wall biogenesis | ||||
| P. capsici | Pcipg2 | Polygalacturonase | Studied only for virulence | |
| P. sojae | GPI16 | GPI transamidase component protein | (Site directed mutagenesis) | |
| Cyst germination | ||||
| Oospore production | ||||
| A. fumigatus | GP56 | Major antigen/allergen with a molecular weight of 56 kD | Studied only for virulence | |
| C. albicans | CaHWP1 | Hyphal wall protein 1 | Positive regulators of hyphal development | |
| CaALS1 | Agglutinin-like sequence | Studied only for virulence | ||
| cell-surface glycoproteins | ||||
| CaALS3 | Agglutinin-like sequence | Studied only for virulence | ||
| cell-surface glycoproteins | ||||
| CaALS2 | Agglutinin-like sequence | Studied only for virulence | ||
| cell-surface glycoproteins | ||||
| CaMP65 | Putative β-glucanase mannoprotein | Hyphal morphogenesis | ||
| Fungal cell adherence | ||||
| C. neoformans | PLB1 | Glycoproteins phospholipase | Intracellular infection | |
| Cell body morphology | ||||
| MP65 | Immunodominant 65-kDa-MP antigen | Studied only for virulence | ||
| CIG1 | Extracellular mannoprotein | Iron acquisition | ||
| Growth on heme | ||||
| MP84 | Mannoprotein | Not studied | ||
| CMP1 | Cryptococcus mannoprotein 1 | Capsule formation | ||
| Localized in the vacuole |
Man9GlcNAc2 : Glycan compositions with 9 mannose and two N-acetylglucosamine residues. X1M6–10: Extended high-mannose glycans containing one Xylose and 6–10 mannose residues. FTGM: Fungal-type galactomannan.