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Volume 53(10); October 2015
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Review
MINIREVIEW] Regulation and function of the Salmonella MgtC virulence protein
Jang-Woo Lee , Eun-Jin Lee
J. Microbiol. 2015;53(10):667-672.   Published online August 1, 2015
DOI: https://doi.org/10.1007/s12275-015-5283-1
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AbstractAbstract
Salmonella enterica serovar Typhimurium produces many virulence proteins to cause diseases. The Salmonella MgtC protein is one of such virulence proteins specially required for intracellular proliferation inside macrophages and mouse virulence. In this review, we will cover how the mgtC gene is turned on or off and what the signals required for mgtC expression are. Later in this review, we will discuss a recent understanding of MgtC function in Salmonella pathogenesis by identifying its target proteins.

Citations

Citations to this article as recorded by  
  • The peptidoglycan-associated lipoprotein gene mutant elicits robust immunological defense in mice against Salmonella enteritidis
    Guixin Zhao, Wenlong Duan, Lu Zhang, Wenchao Sun, Wan Liu, Xiaoyu Zhang, Yanying Zhang, Qiumei Shi, Tonglei Wu
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • Insights into the global genomic features of Salmonella enterica serovar Gallinarum biovars Gallinarum and Pullorum
    Isabela C Campos, Felipe Pinheiro Vilela, Mauro de M S Saraiva, Angelo Berchieri Junior, Juliana Pfrimer Falcão
    Journal of Applied Microbiology.2024;[Epub]     CrossRef
  • Salmonella Gallinarum mgtC mutant shows a delayed fowl typhoid progression in chicken
    Lucas Bocchini Rodrigues Alves, Oliveiro Caetano de Freitas Neto, Mauro de Mesquita Souza Saraiva, Daniel Farias Marinho do Monte, Bruna Nestlehner de Lima, Julia Memrava Cabrera, Fernanda de Oliveira Barbosa, Valdinete Pereira Benevides, Túlio Spina de L
    Gene.2024; 892: 147827.     CrossRef
  • CRISPR-Cas system positively regulates virulence of Salmonella enterica serovar Typhimurium
    Nandita Sharma, Ankita Das, Abhilash Vijay Nair, Palash Sethi, Vidya Devi Negi, Dipshikha Chakravortty, Sandhya Amol Marathe
    Gut Pathogens.2024;[Epub]     CrossRef
  • Contribution of intramacrophage stages to Pseudomonas aeruginosa infection outcome in zebrafish embryos: insights from mgtC and oprF mutants
    Hélène Hajjar, Laurence Berry, Yongzheng Wu, Lhousseine Touqui, Annette C. Vergunst, Anne-Béatrice Blanc-Potard
    Scientific Reports.2024;[Epub]     CrossRef
  • Impact of Arsenic Stress on the Antioxidant System and Photosystem of Arthrospira platensis
    Jiawei Liu, Jie Du, Di Wu, Xiang Ji, Xiujuan Zhao
    Biology.2024; 13(12): 1049.     CrossRef
  • Horizontal Gene Transfer and Drug Resistance Involving Mycobacterium tuberculosis
    Xuhua Xia
    Antibiotics.2023; 12(9): 1367.     CrossRef
  • Virulence genes identification in Salmonella enterica isolates from humans, crocodiles, and poultry farms from two regions in Colombia
    Julieth Michel Petano-Duque, Valentina Rueda-García, Iang Schroniltgen Rondón-Barragán
    Veterinary World.2023; : 2096.     CrossRef
  • Virulence and Antimicrobial Resistance Gene Profiling of Salmonella Isolated from Swine Meat Samples in Abattoirs and Wet Markets of Metro Manila, Philippines
    Rance Derrick N. Pavon, Windell L. Rivera
    Microbiology and Biotechnology Letters.2023; 51(4): 390.     CrossRef
  • Virulence Mechanisms of Mycobacterium abscessus: Current Knowledge and Implications for Vaccine Design
    Kia C. Ferrell, Matt D. Johansen, James A. Triccas, Claudio Counoupas
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Characterization of Salmonella spp. Isolates from Swine: Virulence and Antimicrobial Resistance
    Hai Nguyen Thi, Thi-Thanh-Thao Pham, Barbara Turchi, Filippo Fratini, Valentina Virginia Ebani, Domenico Cerri, Fabrizio Bertelloni
    Animals.2020; 10(12): 2418.     CrossRef
  • The mgtCBR mRNA Leader Secures Growth of Salmonella in Both Host and Non-host Environments
    Myungseo Park, Hyunkeun Kim, Daesil Nam, Dae-Hyuk Kweon, Dongwoo Shin
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Synthetic hydrophobic peptides derived from MgtR weaken Salmonella pathogenicity and work with a different mode of action than endogenously produced peptides
    Mariana Rosas Olvera, Preeti Garai, Grégoire Mongin, Eric Vivès, Laila Gannoun-Zaki, Anne-Béatrice Blanc-Potard
    Scientific Reports.2019;[Epub]     CrossRef
  • The malS-5′UTR weakens the ability of Salmonella enterica serovar Typhi to survive in macrophages by increasing intracellular ATP levels
    Fang Dong, Lin Xia, Renfei Lu, Xin Zhao, Yiquan Zhang, Ying Zhang, Xinxiang Huang
    Microbial Pathogenesis.2018; 115: 321.     CrossRef
  • High‐level, constitutive expression of the mgtC gene confers increased thermotolerance on Salmonella enterica serovar Typhimurium
    Aaron R. Gall, Annie E. Hegarty, Kirill A. Datsenko, Richard P. Westerman, Phillip SanMiguel, Laszlo N. Csonka
    Molecular Microbiology.2018; 109(3): 327.     CrossRef
  • Regulatory RNAs in Virulence and Host-Microbe Interactions
    Alexander J. Westermann, Gisela Storz, Kai Papenfort
    Microbiology Spectrum.2018;[Epub]     CrossRef
  • Mechanisms of Adaptive Immunity to Porcine Reproductive and Respiratory Syndrome Virus
    Michael Rahe, Michael Murtaugh
    Viruses.2017; 9(6): 148.     CrossRef
  • Regulating Bacterial Virulence with RNA
    Juan J. Quereda, Pascale Cossart
    Annual Review of Microbiology.2017; 71(1): 263.     CrossRef
  • A trans -acting leader RNA from a Salmonella virulence gene
    Eunna Choi, Yoontak Han, Yong-Joon Cho, Daesil Nam, Eun-Jin Lee
    Proceedings of the National Academy of Sciences.2017; 114(38): 10232.     CrossRef
  • Elongation factor P restricts Salmonella’s growth by controlling translation of a Mg2+ transporter gene during infection
    Eunna Choi, Soomin Choi, Daesil Nam, Shinae Park, Yoontak Han, Jung-Shin Lee, Eun-Jin Lee
    Scientific Reports.2017;[Epub]     CrossRef
  • Intramacrophage Survival for Extracellular Bacterial Pathogens: MgtC As a Key Adaptive Factor
    Claudine Belon, Anne-Béatrice Blanc-Potard
    Frontiers in Cellular and Infection Microbiology.2016;[Epub]     CrossRef
  • Behavior variability of Salmonella enterica isolates from meat-related sources
    Huhu Wang, Yun Jiang, Xuan Liu, Wenjuan Qian, Xinglian Xu, Guanghong Zhou
    LWT.2016; 73: 375.     CrossRef
Research Support, Non-U.S. Gov'ts
Sphingomonas parvus sp. nov. isolated from a ginseng-cultivated soil
Jae-Hyung Ahn , Byoung-chan Kim , Soo-Jin Kim , Geun-Hey Lee , Jaekyeong Song , Soon-Wo Kwon , Hang-Yeon Weon
J. Microbiol. 2015;53(10):673-677.   Published online October 2, 2015
DOI: https://doi.org/10.1007/s12275-015-5132-2
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AbstractAbstract
Strain GP20-2T was isolated from a soil cultivated with ginseng in Korea. The 16S rRNA gene sequence of this strain showed the highest sequence similarity with Sphingomonas daechungensis CH15-11T (96.7%) and Sphingomonas sediminicola Dae 20T (96.2%) among the type strains. The strain GP20-2T was a strictly aerobic, Gram-negative, non-motile, rod-shaped bacterium that formed very tiny colonies, less than 0.3 mm in diameter after 10 days on R2A agar. The strain grew at 10–35°C (optimum, 35°C), at a pH of 5.0–8.0 (optimum, pH 6.0), and in the absence of NaCl. The DNA G+C content of strain GP20-2T was 67.2 mol%. It contained ubiquinone Q-10 as the major isoprenoid quinone, and summed feature 8 (C18:1ω6c and/or C18:1ω7c, 49.8%) and C16:0 (17.0%) as the major fatty acids. On the basis of evidence from our polyphasic taxonomic study, we concluded that strain GP20-2T should be classified as a novel species of the genus Sphingomonas, for which the name Sphingomonas parvus sp. nov. is proposed. The type strain is GP20-2T (=KACC 12865T =DSM 100456T).

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  • Sphingomonas segetis sp. nov., isolated from spinach farming field soil
    Jae-Chan Lee, Kyung-Sook Whang
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(6): 3905.     CrossRef
  • Sphingomonas ginkgonis sp. nov., isolated from phyllosphere of Ginkgo biloba
    Inseong Cha, Heeyoung Kang, Haneul Kim, Kiseong Joh
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(10): 3224.     CrossRef
  • An Effect of Salt Concentration and Inoculum Size on Poly(Vinyl Alcohol) Utilization by Two Sphingomonas Strains
    Markéta Měrková, Markéta Julinová, Josef Houser, Jan Růžička
    Journal of Polymers and the Environment.2018; 26(6): 2227.     CrossRef
  • Sphingomonas limnosediminicola sp. nov. and Sphingomonas palustris sp. nov., isolated from freshwater environments
    Ji Hee Lee, Dae In Kim, Han Na Choe, Soon Dong Lee, Chi Nam Seong
    International Journal of Systematic and Evolutionary Microbiology.2017; 67(8): 2834.     CrossRef
  • Sphingomonas lutea sp. nov., isolated from freshwater of an artificial reservoir
    Ji Hee Lee, Dae In Kim, Joo Won Kang, Chi Nam Seong
    International Journal of Systematic and Evolutionary Microbiology.2016; 66(12): 5493.     CrossRef
Illumina-based analysis of bacterial diversity related to halophytes Salicornia europaea and Sueada aralocaspica
Ying-wu Shi , Kai Lou , Chun Li , Lei Wang , Zhen-yong Zhao , Shuai Zhao , Chang-yan Tian
J. Microbiol. 2015;53(10):678-685.   Published online October 2, 2015
DOI: https://doi.org/10.1007/s12275-015-5080-x
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AbstractAbstract
We used Illumina-based 16S rRNA V3 amplicon pyrosequencing to investigate the community structure of soil bacteria from the rhizosphere surrounding Salicornia europaea, and endophytic bacteria living in Salicornia europaea plants and Sueada aralocaspica seeds growing at the Fukang Desert Ecosystem Observation and Experimental Station (FDEOES) in Xinjiang Province, China, using an Illumina genome analyzer. A total of 89.23 M effective sequences of the 16S rRNA gene V3 region were obtained from the two halophyte species. These sequences revealed a number of operational taxonomic units (OTUs) in the halophytes. There were between 22–2,206 OTUs in the halophyte plant sample, at the 3% cutoff level, and a sequencing depth of 30,000 sequences. We identified 25 different phyla, 39 classes and 141 genera from the resulting 134,435 sequences. The most dominant phylum in all the samples was Proteobacteria (41.61%–99.26%; average, 43.30%). The other large phyla were Firmicutes (0%– 7.19%; average, 1.15%), Bacteroidetes (0%–1.64%; average, 0.44%) and Actinobacteria (0%–0.46%; average, 0.24%). This
result
suggested that the diversity of bacteria is abundant in the rhizosphere soil, while the diversity of bacteria was poor within Salicornia europaea plant samples. To the extent of our knowledge, this study is the first to characterize and compare the endophytic bacteria found within different halophytic plant species roots using PCR-based Illumina pyrosequencing
method
.

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  • Plant Growth‐Promoting Bacteria Associated With Some Salt‐Tolerant Plants
    Fatemeh Beitsayahi, Naeimeh Enayatizamir, Leila Nejadsadeghi, Fatemeh Nasernakhaei
    Journal of Basic Microbiology.2024;[Epub]     CrossRef
  • Insight into endophytic microbial diversity in two halophytes and plant beneficial attributes of Bacillus swezeyi
    Lei Gao, Jin-Biao Ma, Yin Huang, Murad Muhammad, Hai-Ting Lian, Vyacheslav Shurigin, Dilfuza Egamberdieva, Wen-Jun Li, Li Li
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • Soil bacterial diversity and community structure of Suaeda glauca vegetation in the Hetao Irrigation District, Inner Mongolia, China
    Ruixiao Dong, Xinbo Wang, Yuyi Li, Hongyuan Zhang, Xiaobin Li, Jiashen Song, Fangdi Chang, Wenhao Feng, Huancheng Pang, Jing Wang
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • Biostimulation of Salicornia europaea L. crops with plant growth-promoting bacteria in laboratory and field conditions: effects on growth and metabolite profile
    Maria J Ferreira, I Natalia Sierra-Garcia, Javier Cremades, Carla António, Ana M Rodrigues, Diana C G A Pinto, Helena Silva, Ângela Cunha
    Journal of Applied Microbiology.2023;[Epub]     CrossRef
  • Sustainable agricultural management of saline soils in arid and semi-arid Mediterranean regions through halophytes, microbial and soil-based technologies
    Salvadora Navarro-Torre, Pedro Garcia-Caparrós, Amaia Nogales, Maria Manuela Abreu, Erika Santos, Ana Lúcia Cortinhas, Ana Delaunay Caperta
    Environmental and Experimental Botany.2023; 212: 105397.     CrossRef
  • Domestication shapes the endophytic microbiome and metabolome ofSalicornia europaea
    Maria J Ferreira, I Natalia Sierra-Garcia, António Louvado, Newton C M Gomes, Sandro Figueiredo, Carla Patinha, Diana C G A Pinto, Javier Cremades, Helena Silva, Ângela Cunha
    Journal of Applied Microbiology.2023;[Epub]     CrossRef
  • Biotechnological Potential of Galophytes and Their Microbiomes for Agriculture in Russia and Kazakhstan
    V. K. Chebotar, E. P. Chizhevskaya, O. V. Khonina, R. D. Kostitsin, A. A. Kurmanbayev, B. Mukhambetov, V. N. Pishchik, M. E. Baganova, N. G. Lapenko
    Russian Journal of Plant Physiology.2023;[Epub]     CrossRef
  • Alleviation of Salt Stress via Habitat-Adapted Symbiosis
    Nour El Houda Rabhi, Hafsa Cherif-Silini, Allaoua Silini, Faizah N. Alenezi, Ali Chenari Bouket, Tomasz Oszako, Lassaȃd Belbahri
    Forests.2022; 13(4): 586.     CrossRef
  • Bacterial Community Structure and Potential Microbial Coexistence Mechanism Associated with Three Halophytes Adapting to the Extremely Hypersaline Environment
    Lei Gao, Yin Huang, Yonghong Liu, Osama Abdalla Abdelshafy Mohamed, Xiaorong Fan, Lei Wang, Li Li, Jinbiao Ma
    Microorganisms.2022; 10(6): 1124.     CrossRef
  • A comparative study of bacterial diversity based on effects of three different shade shed types in the rhizosphere of Panax quiquefolium L.
    Xianchang Wang, Xu Guo, Lijuan Hou, Jiaohong Zhang, Jing Hu, Feng Zhang, Jilei Mao, Zhifen Wang, Congjing Zhang, Jinlong Han, Yanwei Zhu, Chao Liu, Jinyue Sun, Chenggang Shan
    PeerJ.2022; 10: e12807.     CrossRef
  • Deciphering the role of endophytic microbiome in postharvest diseases management of fruits: Opportunity areas in commercial up-scale production
    Madhuree Kumari, Kamal A. Qureshi, Mariusz Jaremko, James White, Sandeep Kumar Singh, Vijay Kumar Sharma, Kshitij Kumar Singh, Gustavo Santoyo, Gerardo Puopolo, Ajay Kumar
    Frontiers in Plant Science.2022;[Epub]     CrossRef
  • Profiles of Bacillus spp. Isolated from the Rhizosphere of Suaeda glauca and Their Potential to Promote Plant Growth and Suppress Fungal Phytopathogens
    Ping Lu, Ke Jiang, Ya-Qiao Hao, Wan-Ying Chu, Yu-Dong Xu, Jia-Yao Yang, Jia-Le Chen, Guo-Hong Zeng, Zhou-Hang Gu, Hong-Xin Zhao
    Journal of Microbiology and Biotechnology.2021; 31(9): 1231.     CrossRef
  • The Root Microbiome of Salicornia ramosissima as a Seedbank for Plant-Growth Promoting Halotolerant Bacteria
    Maria J. Ferreira, Angela Cunha, Sandro Figueiredo, Pedro Faustino, Carla Patinha, Helena Silva, Isabel N. Sierra-Garcia
    Applied Sciences.2021; 11(5): 2233.     CrossRef
  • Alkalinity gradients in grasslands alter soil bacterial community composition and function
    Junliang Xiang, Jian Jin, Quan Liu, Yulan Huang, Wensi Wu, Ruixi Tang, Yuan Chen, Kuide Yin
    Soil Science Society of America Journal.2021; 85(2): 286.     CrossRef
  • Bacterial community demonstrates stronger network connectivity than fungal community in desert-grassland salt marsh
    Yaqing Pan, Peng Kang, Jinpeng Hu, Naiping Song
    Science of The Total Environment.2021; 798: 149118.     CrossRef
  • Rhizosphere bacteria community and functions under typical natural halophyte communities in North China salinized areas
    Fating Yin, Fenghua Zhang, Haoran Wang, Jian Liu
    PLOS ONE.2021; 16(11): e0259515.     CrossRef
  • Mediterranean seasonality and the halophyte Arthrocnemum macrostachyum determine the bacterial community in salt marsh soils in Southwest Spain
    Miguel Camacho-Sanchez, José M. Barcia-Piedras, Susana Redondo-Gómez, Maria Camacho
    Applied Soil Ecology.2020; 151: 103532.     CrossRef
  • Dynamic changes in bacterial communities in the recirculating nutrient solution of cucumber plug seedlings cultivated in an ebb-and-flow subirrigation system
    Chun-Juan Dong, Qian Li, Ling-Ling Wang, Qing-Mao Shang, Kandasamy Ulaganathan
    PLOS ONE.2020; 15(4): e0232446.     CrossRef
  • Mining the roots of various species of the halophyte Suaeda for halotolerant nitrogen-fixing endophytic bacteria with the potential for promoting plant growth
    Frashad Alishahi, Hossein Ali Alikhani, Nayer Azam Khoshkholgh-Sima, Hassan Etesami
    International Microbiology.2020; 23(3): 415.     CrossRef
  • Morphophysiological Features of Some Cultivable Bacteria from Saline Soils of the Aral Sea Region
    Sh. A. Begmatov, O. V. Selitskaya, L. V. Vasileva, Yu. Yu. Berestovskaja, N. A. Manucharova, N. V. Drenova
    Eurasian Soil Science.2020; 53(1): 90.     CrossRef
  • Comparative Analysis of Bacterial Diversity and Community Structure in the Rhizosphere and Root Endosphere of Two Halophytes, Salicornia europaea and Glaux maritima, Collected from Two Brackish Lakes in Japan
    Kosuke Yamamoto, Minenosuke Matsutani, Yuh Shiwa, Taichiro Ishige, Hikaru Sakamoto, Hiromasa Saitoh, Seiya Tsushima
    Microbes and Environments.2020; 35(3): n/a.     CrossRef
  • A Microbiome Study Reveals Seasonal Variation in Endophytic Bacteria Among different Mulberry Cultivars
    Ting Ou, Wei-fang Xu, Fei Wang, Gary Strobel, Ze-yang Zhou, Zhong-huai Xiang, Jia Liu, Jie Xie
    Computational and Structural Biotechnology Journal.2019; 17: 1091.     CrossRef
  • Sustainability of Urban Soil Management: Analysis of Soil Physicochemical Properties and Bacterial Community Structure under Different Green Space Types
    Junda Zhang, Suyan Li, Xiangyang Sun, Jing Tong, Zhen Fu, Jing Li
    Sustainability.2019; 11(5): 1395.     CrossRef
  • Transcriptome profiling and environmental linkage to salinity across Salicornia europaea vegetation
    Bliss Ursula Furtado, Istvan Nagy, Torben Asp, Jarosław Tyburski, Monika Skorupa, Marcin Gołębiewski, Piotr Hulisz, Katarzyna Hrynkiewicz
    BMC Plant Biology.2019;[Epub]     CrossRef
  • Bacterial and Fungal Endophytic Microbiomes ofSalicornia europaea
    Bliss Ursula Furtado, Marcin Gołębiewski, Monika Skorupa, Piotr Hulisz, Katarzyna Hrynkiewicz, Emma R. Master
    Applied and Environmental Microbiology.2019;[Epub]     CrossRef
  • Coastal halophytes alter properties and microbial community structure of the saline soils in the Yellow River Delta, China
    Changliang Jing, Zongchang Xu, Ping Zou, Qi Tang, Yiqiang Li, Xiangwei You, Chengsheng Zhang
    Applied Soil Ecology.2019; 134: 1.     CrossRef
  • Improved germination efficiency of Salicornia ramosissima seeds inoculated with Bacillus aryabhattai SP1016‐20
    Carolina Figueira, Maria J. Ferreira, Helena Silva, Angela Cunha
    Annals of Applied Biology.2019; 174(3): 319.     CrossRef
  • Salicornia europaea L. as an underutilized saline-tolerant plant inhabited by endophytic diazotrophs
    Katarzyna Hrynkiewicz, Sascha Patz, Silke Ruppel
    Journal of Advanced Research.2019; 19: 49.     CrossRef
  • Bacterial Diversity Associated With the Rhizosphere and Endosphere of Two Halophytes: Glaux maritima and Salicornia europaea
    Kosuke Yamamoto, Yuh Shiwa, Taichiro Ishige, Hikaru Sakamoto, Keisuke Tanaka, Masataka Uchino, Naoto Tanaka, Suguru Oguri, Hiromasa Saitoh, Seiya Tsushima
    Frontiers in Microbiology.2018;[Epub]     CrossRef
  • Diversity of Bacterial Microbiota of Coastal Halophyte Limonium sinense and Amelioration of Salinity Stress Damage by Symbiotic Plant Growth-Promoting Actinobacterium Glutamicibacter halophytocola KLBMP 5180
    Sheng Qin, Wei-Wei Feng, Yue-Ji Zhang, Tian-Tian Wang, You-Wei Xiong, Ke Xing, Isaac Cann
    Applied and Environmental Microbiology.2018;[Epub]     CrossRef
  • Bacterial microbiome of root-associated endophytes of Salicornia europaea in correspondence to different levels of salinity
    Sonia Szymańska, Luigimaria Borruso, Lorenzo Brusetti, Piotr Hulisz, Bliss Furtado, Katarzyna Hrynkiewicz
    Environmental Science and Pollution Research.2018; 25(25): 25420.     CrossRef
  • The Grapevine and Wine Microbiome: Insights from High-Throughput Amplicon Sequencing
    Horatio H. Morgan, Maret du Toit, Mathabatha E. Setati
    Frontiers in Microbiology.2017;[Epub]     CrossRef
  • Effect of halotolerant endophytic bacteria isolated fromSalicornia europaeaL. on the growth of fodder beet (Beta vulgarisL.) under salt stress
    Agnieszka Piernik, Katarzyna Hrynkiewicz, Anna Wojciechowska, Sonia Szymańska, Marta Izabela Lis, Adele Muscolo
    Archives of Agronomy and Soil Science.2017; 63(10): 1404.     CrossRef
  • Illumina-Based Analysis of Endophytic and Rhizosphere Bacterial Diversity of the Coastal Halophyte Messerschmidia sibirica
    Xue-Ying Tian, Cheng-Sheng Zhang
    Frontiers in Microbiology.2017;[Epub]     CrossRef
Performance of PCR-reverse blot hybridization assay for detection of rifampicin-resistant Mycobacterium leprae
Hye-young Wang , Hyunjung Kim , Yeun Kim , Hyeeun Bang , Jong-Pill Kim , Joo Hwan Hwang , Sang-Nae Cho , Tae Ue Kim , Hyeyoung Lee
J. Microbiol. 2015;53(10):686-693.   Published online October 2, 2015
DOI: https://doi.org/10.1007/s12275-015-5057-9
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AbstractAbstract
Drug resistance in Mycobacterium leprae is a significant problem in countries where leprosy is endemic. A sensitive, specific, and high-throughput reverse blot hybridization assay (REBA) for the detection of genotypic resistance to rifampicin (RIF) was designed and evaluated. It has been shown that resistance to RIF in M. leprae involves mutations in the rpoB gene encoding the β-subunit of the RNA polymerase. The PCR-REBA simultaneously detects both 6 wild-type regions and 5 different mutations (507AGC, 513GTG, 516TAT, 531ATG, and 531TTC) including the most prevalent mutations at positions 507 and 531. Thirty-one clinical isolates provided by Korea Institute of Hansen’s Disease were analyzed by PCR-REBA with RIF resistance of rpoB gene. As a
result
, missense mutations at codons 507 AGC and 531ATG with 2-nucleotide substitutions were found in one sample, and a missense mutation at codon 516 TAT and ΔWT6 (deletion of 530-534) was found in another sample. These cases were confirmed by DNA sequence analysis. This rapid, simple, and highly sensitive assay provides a practical alternative to sequencing for genotypic evaluation of RIF resistance in M. leprae.

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  • Prediction of Y haplogroup by polymerase chain reaction-reverse blot hybridization assay
    Sehee Oh, Jungho Kim, Sunyoung Park, Seoyong Kim, Kyungmyung Lee, Yang-Han Lee, Si-Keun Lim, Hyeyoung Lee
    Genes & Genomics.2019; 41(3): 297.     CrossRef
Antifungal activity of violacein purified from a novel strain of Chromobacterium sp. NIIST (MTCC 5522)
Anju Sasidharan , Nishanth Kumar Sasidharan , Dileepkumar Bhaskaran Nair Saraswathy Amma , Radhakrishnan Kokkuvayil Vasu , Anupama Vijaya Nataraja , Krishnakumar Bhaskaran
J. Microbiol. 2015;53(10):694-701.   Published online October 2, 2015
DOI: https://doi.org/10.1007/s12275-015-5173-6
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AbstractAbstract
A novel strain of Chromobacterium sp. NIIST (MTCC 5522) producing high level of purple blue bioactive compound violacein was isolated from clay mine acidic sediment. During 24 h aerobic incubation in modified Luria Bertani medium, around 0.6 g crude violacein was produced per gram of dry weight biomass. An inexpensive method for preparing crystalline, pure violacein from crude pigment was developed (12.8 mg violacein/L) and the pure compound was characterized by different spectrometric methods. The violacein prepared was found effective against a number of plant and human pathogenic fungi and yeast species such as Cryptococcus gastricus, Trichophyton rubrum, Fusarium oxysporum, Rhizoctonia solani, Aspergillus flavus, Penicillium expansum, and Candida albicans. The best activity was recorded against Trichophyton rubrum (2 μg/ml), a human pathogen responsible for causing athlete’s foot infection. This is the first report of antifungal activity of purified violacein against pathogenic fungi and yeast.

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    Abhishek Chauhan, Darin Mansor Mathkor, Hemant Joshi, Ritu Chauhan, Ujjawal Sharma, Vikas Sharma, Manoj Kumar, Reena V. Saini, Adesh K. Saini, Hardeep Singh Tuli, Damandeep Kaur, Shafiul Haque
    Journal of Biochemical and Molecular Toxicology.2025;[Epub]     CrossRef
  • Extracellular vesicles of Janthinobacterium lividum as violacein carriers in melanoma cell treatment
    Patrycja Kowalska, Jolanta Mierzejewska, Paulina Skrzeszewska, Aleksandra Witkowska, Katarzyna Oksejuk, Ewa Sitkiewicz, Mariusz Krawczyk, Magdalena Świadek, Agata Głuchowska, Klaudia Marlicka, Anna Sobiepanek, Małgorzata Milner-Krawczyk
    Applied Microbiology and Biotechnology.2024;[Epub]     CrossRef
  • Chromobacterium indicum sp. nov., a Pigment-Producing Bacterium Isolated from Soil
    Nandini Verma, Stanzin Choksket, Riya Singla, Anil Kumar Pinnaka, Suresh Korpole
    Current Microbiology.2024;[Epub]     CrossRef
  • AHL-Based Quorum Sensing Regulates the Biosynthesis of a Variety of Bioactive Molecules in Bacteria
    Mélanie Gonzales, Pauline Jacquet, Floriane Gaucher, Éric Chabrière, Laure Plener, David Daudé
    Journal of Natural Products.2024; 87(4): 1268.     CrossRef
  • Gaining molecular insights towards inhibition of foodborne fungi Aspergillus fumigatus by a food colourant violacein via computational approach
    R. Sindhu, Smitha S. Bhat, Jiraporn Sangta, Chandan Dharmashekar, Bhargav Shreevatsa, Chandan Shivamallu, Devananda Devegowda, Shiva Prasad Kollur, Sheikh F. Ahmad, Sabry M. Attia, Sarana Rose Sommano, Shashanka K. Prasad
    Scientific Reports.2024;[Epub]     CrossRef
  • New Target Gene Screening Using Shortened and Random sgRNA Libraries in Microbial CRISPR Interference
    Song Hee Jeong, Hyun Ju Kim, Sang Jun Lee
    ACS Synthetic Biology.2023; 12(3): 800.     CrossRef
  • Natural Pigments Production and Their Application in Food, Health and Other Industries
    Eleonora Di Salvo, Giovanna Lo Vecchio, Rita De Pasquale, Laura De Maria, Roberta Tardugno, Rossella Vadalà, Nicola Cicero
    Nutrients.2023; 15(8): 1923.     CrossRef
  • Antifungal Compounds from Microbial Symbionts Associated with Aquatic Animals and Cellular Targets: A Review
    Madeleine Nina Love Ngo-Mback, Elisabeth Zeuko’o Menkem, Heather G. Marco
    Pathogens.2023; 12(4): 617.     CrossRef
  • An extensive review of marine pigments: sources, biotechnological applications, and sustainability
    Luis Alfonso Muñoz-Miranda, Maricarmen Iñiguez-Moreno
    Aquatic Sciences.2023;[Epub]     CrossRef
  • A Simple Characterisation of Violacein Compound Derived from Chromobacterium sp. strain Dyh27s2016 and its Antimicrobial Activity Against Pseudomonas aeruginosa
    Pratheep Sandrasaigaran, Mohamed Jafran Abul Baseer
    Malaysian Journal of Science and Advanced Technology.2023; : 1.     CrossRef
  • Priming Chromobacterium violaceum as a Gold Bioleacher in E-wastes: Advantages and Challenges
    Thiviaraj Palanysamy, Rattika Sukalingam, Pratheep Sandrasaigaran
    Malaysian Journal of Science and Advanced Technology.2023; : 222.     CrossRef
  • Purification of Natural Pigments Violacein and Deoxyviolacein Produced by Fermentation Using Yarrowia lipolytica
    Georgio Nemer, Nicolas Louka, Paul Rabiller Blandin, Richard G. Maroun, Eugène Vorobiev, Tristan Rossignol, Jean-Marc Nicaud, Erwann Guénin, Mohamed Koubaa
    Molecules.2023; 28(11): 4292.     CrossRef
  • Genome sequencing and multifaceted taxonomic analysis of novel strains of violacein-producing bacteria and non-violacein-producing close relatives
    Marina Estella De León, Harriet S. Wilson, Guillaume Jospin, Jonathan A. Eisen
    Microbial Genomics .2023;[Epub]     CrossRef
  • Fermentation in Minimal Media and Fungal Elicitation Enhance Violacein and Deoxyviolacein Production in Two Janthinobacterium Strains
    Andri Frediansyah, Yosephine Sri Wulan Manuhara, Alfinda Novi Kristanti, Arif Luqman, Anjar Tri Wibowo
    Fermentation.2022; 8(12): 714.     CrossRef
  • Improvement in Violacein Production by Utilizing Formic Acid to Induce Quorum Sensing in Chromobacterium violaceum
    Kuan-Chen Cheng, Hsiang-Chun Hsiao, Yu-Chen Hou, Chang-Wei Hsieh, Hsien-Yi Hsu, Hung-Yueh Chen, Shin-Ping Lin
    Antioxidants.2022; 11(5): 849.     CrossRef
  • Violacein from an Antarctic Iodobacter sp. 7MAnt and its function as immunomodulator of the defence mechanism of innate immunity in fish cells
    Beatriz Valenzuela, Almendra Benavides, Daniela Gutierrez, Lotsé Blamey, María Teresa Monsalves, Brenda Modak, Jenny M. Blamey
    Journal of Fish Diseases.2022; 45(3): 485.     CrossRef
  • Fermentation Quality and Microbial Community of Corn Stover or Rice Straw Silage Mixed with Soybean Curd Residue
    Xiaolin Wang, Jiamei Song, Zihan Liu, Guangning Zhang, Yonggen Zhang
    Animals.2022; 12(7): 919.     CrossRef
  • Development of Methylorubrum extorquens AM1 as a promising platform strain for enhanced violacein production from co-utilization of methanol and acetate
    Hoa Thi Quynh Le, Dung Hoang Anh Mai, Jeong-Geol Na, Eun Yeol Lee
    Metabolic Engineering.2022; 72: 150.     CrossRef
  • Prey identity affects fitness of a generalist consumer in a brown food web
    Lily Khadempour, Leslie Rivas Quijano, Casey P. terHorst
    Ecology and Evolution.2022;[Epub]     CrossRef
  • Violacein and its antifungal activity: comments and potentialities
    N. Durán, G.R. Castro, R.W.D. Portela, W.J. Fávaro, M. Durán, L. Tasic, G. Nakazato
    Letters in Applied Microbiology.2022; 75(4): 796.     CrossRef
  • Applications of Natural Violet Pigments from Halophilic Chromobacterium violaceum PDF23 for Textile Dyeing with Antimicrobial and Antioxidant Potentials
    Antonyraj Matharasi Perianaika Anahas, Subramanian Kumaran, Mahmoud Kandeel, Gangatharan Muralitharan, Jenifer Silviya, Geja Lakshmi Adhimoolam, Mani Panagal, Sampath Renuka Pugazhvendan, Gopal Suresh, A. Wilson Aruni, Senthil Rethinam, Nainangu Prasannab
    Journal of Nanomaterials.2022;[Epub]     CrossRef
  • Evaluation of the anti‑proliferative activity of violacein, a natural pigment of bacterial origin, in urinary bladder cancer cell lines
    Bruna Neron, Maria Zingaropoli, Giulia Radocchia, Maria Ciardi, Luciana Mosca, Fabrizio Pantanella, Serena Schippa
    Oncology Letters.2022;[Epub]     CrossRef
  • Isolation and Properties of the Bacterial Strain Janthinobacterium sp. SLB01
    Lubov Chernogor, Kseniya Bakhvalova, Alina Belikova, Sergei Belikov
    Microorganisms.2022; 10(5): 1071.     CrossRef
  • Bacterial pigments: A colorful palette reservoir for biotechnological applications
    Viviana Teresa Orlandi, Eleonora Martegani, Cristina Giaroni, Andreina Baj, Fabrizio Bolognese
    Biotechnology and Applied Biochemistry.2022; 69(3): 981.     CrossRef
  • Lignocellulosic substrates as starting materials for the production of bioactive biopigments
    Tiago Daniel Madureira de Medeiros, Laurent Dufossé, Juliano Lemos Bicas
    Food Chemistry: X.2022; 13: 100223.     CrossRef
  • Biotechnological Activities and Applications of Bacterial Pigments Violacein and Prodigiosin
    Seong Yeol Choi, Sungbin Lim, Kyoung-hye Yoon, Jin I. Lee, Robert J. Mitchell
    Journal of Biological Engineering.2021;[Epub]     CrossRef
  • Multi-target drug with potential applications: violacein in the spotlight
    Nelson Durán, Gerson Nakazato, Marcela Durán, Ignasio R. Berti, Guillermo R. Castro, Danijela Stanisic, Marcelo Brocchi, Wagner J. Fávaro, Carmen V. Ferreira-Halder, Giselle Z. Justo, Ljubica Tasic
    World Journal of Microbiology and Biotechnology.2021;[Epub]     CrossRef
  • Chemical signals driving bacterial–fungal interactions
    Saima Khalid, Nancy P. Keller
    Environmental Microbiology.2021; 23(3): 1334.     CrossRef
  • Disrupting quorum sensing alters social interactions in Chromobacterium violaceum
    Sonia Mion, Nathan Carriot, Julien Lopez, Laure Plener, Annick Ortalo-Magné, Eric Chabrière, Gérald Culioli, David Daudé
    npj Biofilms and Microbiomes.2021;[Epub]     CrossRef
  • Recent Advances in Synthetic, Industrial and Biological Applications of Violacein and Its Heterologous Production
    Aqsa Ahmed, Abdullah Ahmad, Renhan Li, Waleed AL-Ansi, Momal Fatima, Bilal Sajid Mushtaq, Samra Basharat, Ye Li, Zhonghu Bai
    Journal of Microbiology and Biotechnology.2021; 31(11): 1465.     CrossRef
  • Microbial synthesis of violacein pigment and its potential applications
    HyunA Park, SeoA Park, Yung-Hun Yang, Kwon-Young Choi
    Critical Reviews in Biotechnology.2021; 41(6): 879.     CrossRef
  • Exploitation of Versatile Naturally Derived Blue Colorant Pigment 3-[2-hydroxy-5-(5-hydroxy-1H-indol-3-yl)-1H-pyrrol-3-yl] indol-one
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    IOP Conference Series: Materials Science and Engineering.2021; 1219(1): 012020.     CrossRef
  • Characterization and low-cost preservation of Chromobacterium violaceum strain TRFM-24 isolated from Tripura state, India
    Sushil K. Sharma, Rakhi Dhyani, Ees Ahmad, Pankaj K. Maurya, Madhu Yadav, Ramesh Chandra Yadav, Vinod Kumar Yadav, Pawan K. Sharma, Mahaveer P. Sharma, Aketi Ramesh, Anil K. Saxena
    Journal of Genetic Engineering and Biotechnology.2021; 19(1): 146.     CrossRef
  • Production and antiproliferative effect of violacein, a purple pigment produced by an Antarctic bacterial isolate
    Diego Alem, Juan José Marizcurrena, Verónica Saravia, Danilo Davyt, Wilner Martinez-Lopez, Susana Castro-Sowinski
    World Journal of Microbiology and Biotechnology.2020;[Epub]     CrossRef
  • An Overview on Industrial and Medical Applications of Bio-Pigments Synthesized by Marine Bacteria
    Ali Nawaz, Rida Chaudhary, Zinnia Shah, Laurent Dufossé, Mireille Fouillaud, Hamid Mukhtar, Ikram ul Haq
    Microorganisms.2020; 9(1): 11.     CrossRef
  • Isolation and characterization of violacein from an Antarctic Iodobacter: a non-pathogenic psychrotolerant microorganism
    Joaquin Atalah, Lotsé Blamey, Sebastian Muñoz-Ibacache, Felipe Gutierrez, Marcela Urzua, Maria Victoria Encinas, Maritza Páez, Junsong Sun, Jenny M. Blamey
    Extremophiles.2020; 24(1): 43.     CrossRef
  • Interplay between two quorum sensing‐regulated pathways, violacein biosynthesis and VacJ/Yrb, dictates outer membrane vesicle biogenesis in Chromobacterium violaceum
    Juliana H. Batista, Fernanda C. Leal, Taise T. H. Fukuda, Juliana Alcoforado Diniz, Fausto Almeida, Mônica T. Pupo, José F. da Silva Neto
    Environmental Microbiology.2020; 22(6): 2432.     CrossRef
  • Violacein Targets the Cytoplasmic Membrane of Bacteria
    Ana C. G. Cauz, Gustavo P. B. Carretero, Greice K. V. Saraiva, Peter Park, Laura Mortara, Iolanda M. Cuccovia, Marcelo Brocchi, Frederico J. Gueiros-Filho
    ACS Infectious Diseases.2019; 5(4): 539.     CrossRef
  • Optoregulated Drug Release from an Engineered Living Material: Self‐Replenishing Drug Depots for Long‐Term, Light‐Regulated Delivery
    Shrikrishnan Sankaran, Judith Becker, Christoph Wittmann, Aránzazu del Campo
    Small.2019;[Epub]     CrossRef
  • Antiplasmodial and trypanocidal activity of violacein and deoxyviolacein produced from synthetic operons
    Elizabeth Bilsland, Tatyana A. Tavella, Renata Krogh, Jamie E. Stokes, Annabelle Roberts, James Ajioka, David R. Spring, Adriano D. Andricopulo, Fabio T. M. Costa, Stephen G. Oliver
    BMC Biotechnology.2018;[Epub]     CrossRef
  • Stimulation of Violacein Biosynthesis in Chromobacterium violaceum Biofilms in the Presence of Dimethyl Sulfoxide
    S. V. Mart’yanov, A. V. Letarov, P. A. Ivanov, V. K. Plakunov
    Microbiology.2018; 87(3): 437.     CrossRef
  • Investigating the potential use of an Antarctic variant of Janthinobacterium lividum for tackling antimicrobial resistance in a One Health approach
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    Scientific Reports.2018;[Epub]     CrossRef
  • Interaction of violacein in models for cellular membranes: Regulation of the interaction by the lipid composition at the air-water interface
    Karine Damaceno de Souza, Katia Regina Perez, Nelson Durán, Giselle Zenker Justo, Luciano Caseli
    Colloids and Surfaces B: Biointerfaces.2017; 160: 247.     CrossRef
  • Fungal and Bacterial Pigments: Secondary Metabolites with Wide Applications
    Manik Prabhu Narsing Rao, Min Xiao, Wen-Jun Li
    Frontiers in Microbiology.2017;[Epub]     CrossRef
Relationships between the use of Embden Meyerhof pathway (EMP) or Phosphoketolase pathway (PKP) and lactate production capabilities of diverse Lactobacillus reuteri strains
Grégoire Burgé , Claire Saulou-Bérion , Marwen Moussa , Florent Allais , Violaine Athes , Henry-Eric Spinnler
J. Microbiol. 2015;53(10):702-710.   Published online October 2, 2015
DOI: https://doi.org/10.1007/s12275-015-5056-x
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AbstractAbstract
The aims of this study is to compare the growth and glucose metabolism of three Lactobacillus reuteri strains (i.e. DSM 20016, DSM 17938, and ATCC 53608) which are lactic acid bacteria of interest used for diverse applications such as probiotics implying the production of biomass, or for the production of valuable chemicals (3-hydroxypropionaldehyde, 3-hydroxypropionic acid, 1,3-propanediol). However, the physiological diversity inside the species, even for basic metabolisms, like its capacity of acidification or glucose metabolism, has not been studied yet. In the present work, the growth and metabolism of three strains representative of the species diversity have been studied in batch mode. The strains were compared through characterization of growth kinetics and evaluation of acidification kinetics, substrate consumption and product formation. The results showed significant differences between the three strains which may be explained, at least in part, by variations in the distribution of carbon source between two glycolytic pathways during the bacterial growth: the phosphoketolase or heterolactic pathway (PKP) and the Embden-Meyerhof pathway (EMP). It was also shown that, in the context of obtaining a large amount of biomass, DSM 20016 and DSM 17938 strains were the most effective in terms of growth kinetics. The DSM 17938 strain, which shows the more significant metabolic shift from EMP to PKP when the pH decreases, is more effective for lactate production.

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    FEMS Microbiology Reviews.2024;[Epub]     CrossRef
  • Estimating the contribution of the porcine fecal core microbiota to metabolite production via mathematical modeling and in vitro fermentation
    Salvatore Galgano, Helen Kettle, Andrew Free, Jos G. M. Houdijk, Vanni Bucci
    mSystems.2024;[Epub]     CrossRef
  • Solid‐state fermentation: Bioconversions and impacts on bioactive and nutritional compounds in oats
    Stella Green, Graham T. Eyres, Dominic Agyei, Biniam Kebede
    Comprehensive Reviews in Food Science and Food Safety.2024;[Epub]     CrossRef
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    Akif Emre Kavak, İnci Zent, Ezgi Metin Sağır, Gülistan Öncü, Feride İrem Şimşek
    Annals of Microbiology.2024;[Epub]     CrossRef
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    Yujuan Zhao, Zijian Zhao, Yansong Gao, Ge Yang, Xiaoxiao Liu, Ruochen Huang, Wei Liang, Shengyu Li
    LWT.2023; 178: 114615.     CrossRef
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    Juan Gilberto Martínez-Miranda, Isaac Chairez, Enrique Durán-Páramo
    Applied Biochemistry and Biotechnology.2022; 194(6): 2762.     CrossRef
  • Production of high-value added exopolysaccharide by biotherapeutic potential Lactobacillus reuteri strain
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    Biochemical Engineering Journal.2022; 188: 108691.     CrossRef
  • High-resolution structure of phosphoketolase from Bifidobacterium longum determined by cryo-EM single-particle analysis
    Kunio Nakata, Naoyuki Miyazaki, Hiroki Yamaguchi, Mika Hirose, Tatsuki Kashiwagi, Nidamarthi H.V. Kutumbarao, Osamu Miyashita, Florence Tama, Hiroshi Miyano, Toshimi Mizukoshi, Kenji Iwasaki
    Journal of Structural Biology.2022; 214(2): 107842.     CrossRef
  • In Silico Genomic and Metabolic Atlas of Limosilactobacillus reuteri DSM 20016: An Insight into Human Health
    Paisleigh Smythe, Georgios Efthimiou
    Microorganisms.2022; 10(7): 1341.     CrossRef
  • Changes and machine learning-based prediction in quality characteristics of sliced Korean cabbage (Brassica rapa L. pekinensis) kimchi: Combined effect of nano-foamed structure film packaging and subcooled storage
    So Yoon Park, Miran Kang, Suk-Min Yun, Jong-Bang Eun, Bo-Sung Shin, Ho Hyun Chun
    LWT.2022; 171: 114122.     CrossRef
  • Acids produced by lactobacilli inhibit the growth of commensal Lachnospiraceae and S24-7 bacteria
    Emma J. E. Brownlie, Danica Chaharlangi, Erin Oi-Yan Wong, Deanna Kim, William Wiley Navarre
    Gut Microbes.2022;[Epub]     CrossRef
  • Salinity enhances high optically active L-lactate production from co-fermentation of food waste and waste activated sludge: Unveiling the response of microbial community shift and functional profiling
    Xiang Li, Safeena Sadiq, Wenjuan Zhang, Yiren Chen, Xianbao Xu, Anees Abbas, Shanping Chen, Ruina Zhang, Gang Xue, Dominika Sobotka, Jacek Makinia
    Bioresource Technology.2021; 319: 124124.     CrossRef
  • Pre-fermentation of malt whisky wort using Lactobacillus plantarum and its influence on new-make spirit character
    Struan James Reid, Robert Alexander Speers, Nik Willoughby, William Bain Lumsden, Dawn Louise Maskell
    Food Chemistry.2020; 320: 126605.     CrossRef
  • Oriented Fermentation of Food Waste towards High-Value Products: A Review
    Qiao Wang, Huan Li, Kai Feng, Jianguo Liu
    Energies.2020; 13(21): 5638.     CrossRef
  • Effects of combining two lactic acid bacteria as a starter culture on model kimchi fermentation
    Jae-Jun Lee, Yun-Jeong Choi, Min Jung Lee, Sung Jin Park, Su Jin Oh, Ye-Rang Yun, Sung Gi Min, Hye-Young Seo, Sung-Hee Park, Mi-Ai Lee
    Food Research International.2020; 136: 109591.     CrossRef
  • Impact of the fermentation parameters pH and temperature on stress resilience of Lactobacillus reuteri DSM 17938
    Armando Hernández, Christer U. Larsson, Radoslaw Sawicki, Ed W. J. van Niel, Stefan Roos, Sebastian Håkansson
    AMB Express.2019;[Epub]     CrossRef
  • A metabolic reconstruction of Lactobacillus reuteri JCM 1112 and analysis of its potential as a cell factory
    Thordis Kristjansdottir, Elleke F. Bosma, Filipe Branco dos Santos, Emre Özdemir, Markus J. Herrgård, Lucas França, Bruno Ferreira, Alex T. Nielsen, Steinn Gudmundsson
    Microbial Cell Factories.2019;[Epub]     CrossRef
  • Towards sustainability of lactic acid and poly-lactic acid polymers production
    A. Djukić-Vuković, D. Mladenović, J. Ivanović, J. Pejin, L. Mojović
    Renewable and Sustainable Energy Reviews.2019; 108: 238.     CrossRef
  • Lactobacilli and pediococci as versatile cell factories – Evaluation of strain properties and genetic tools
    Elleke F. Bosma, Jochen Forster, Alex Toftgaard Nielsen
    Biotechnology Advances.2017; 35(4): 419.     CrossRef
  • Isothermal microcalorimetry for rapid viability assessment of freeze-dried Lactobacillus reuteri
    Armando Hernández Garcia, Anke M. Herrmann, Sebastian Håkansson
    Process Biochemistry.2017; 55: 49.     CrossRef
  • Conversion of Glycerol to 3-Hydroxypropanoic Acid by Genetically Engineered Bacillus subtilis
    Aida Kalantari, Tao Chen, Boyang Ji, Ivan A. Stancik, Vaishnavi Ravikumar, Damjan Franjevic, Claire Saulou-Bérion, Anne Goelzer, Ivan Mijakovic
    Frontiers in Microbiology.2017;[Epub]     CrossRef
  • Novel molecular, structural and evolutionary characteristics of the phosphoketolases from bifidobacteria and Coriobacteriales
    Radhey S. Gupta, Anish Nanda, Bijendra Khadka, Eugene A. Permyakov
    PLOS ONE.2017; 12(2): e0172176.     CrossRef
  • Redox Balance in Lactobacillus reuteri DSM20016: Roles of Iron-Dependent Alcohol Dehydrogenases in Glucose/ Glycerol Metabolism
    Lu Chen, Paul David Bromberger, Gavin Nieuwenhuiys, Rajni Hatti-Kaul, Shihui Yang
    PLOS ONE.2016; 11(12): e0168107.     CrossRef
Structural basis for the ATP-independent proteolytic activity of LonB proteases and reclassification of their AAA+ modules
Young Jun An , Jung-Hyun Na , Myung-Il Kim , Sun-Shin Cha
J. Microbiol. 2015;53(10):711-717.   Published online October 2, 2015
DOI: https://doi.org/10.1007/s12275-015-5417-5
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AbstractAbstract
Lon proteases degrade defective or denature proteins as well as some folded proteins for the control of cellular protein quality. There are two types of Lon proteases, LonA and LonB. Each consists of two functional components: a protease component and an ATPase associated with various cellular activities (AAA+ module). Here, we report the 2.03 Å-resolution crystal structure of the isolated AAA+ module (iAAA+ module) of LonB from Thermococcus onnurineus NA1 (TonLonB). The iAAA+ module, having no bound nucleotide, adopts a conformation virtually identical to the ADP-bound conformation of AAA+ modules in the hexameric structure of TonLonB; this provides insights into the ATP-independent proteolytic activity observed in a LonB protease. Structural comparison of AAA+ modules between LonA and LonB revealed that the AAA+ modules of Lon proteases are separated into two distinct clades depending on their structural features. The AAA+ module of LonB belongs to the ‘H2 & Ins1 insert clade (HINS clade)’ defined for the first time in this study, while the AAA+ module of LonA is a member of the HCLR clade.

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  • Unique Structural Fold of LonBA Protease from Bacillus subtilis, a Member of a Newly Identified Subfamily of Lon Proteases
    Alla Gustchina, Mi Li, Anna G. Andrianova, Arsen M. Kudzhaev, George T. Lountos, Bartosz Sekula, Scott Cherry, Joseph E. Tropea, Ivan V. Smirnov, Alexander Wlodawer, Tatyana V. Rotanova
    International Journal of Molecular Sciences.2022; 23(19): 11425.     CrossRef
  • Structure and the Mode of Activity of Lon Proteases from Diverse Organisms
    Alexander Wlodawer, Bartosz Sekula, Alla Gustchina, Tatyana V. Rotanova
    Journal of Molecular Biology.2022; 434(7): 167504.     CrossRef
  • Proteolytic systems of archaea: slicing, dicing, and mincing in the extreme
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    Emerging Topics in Life Sciences.2018; 2(4): 561.     CrossRef
Journal Article
Regulation of HBV-specific CD8+ T cell-mediated inflammation is diversified in different clinical presentations of HBV infection
Colin M. Dinney , Lu-Dong Zhao , Charles D. Conrad , Jay M. Duker , Richard O. Karas , Zhibin Hu , Michele A. Hamilton , Thomas R. Gillis , Thomas M. Parker , Bing Fan , Andrew H. Advani , Fred B. Poordad , Paulette L. Fauceglia , Kathrin M. Kirsch , Peter T. Munk , Marc P. Ladanyi , Bernard A. Bochner , Justin A. Bekelman , Carla M. Grandori , James C. Olson , Ronald D. Lechan , Ghassan M.A. Abou , Mark A. Goodarzi
J. Microbiol. 2015;53(10):718-724.   Published online October 2, 2015
DOI: https://doi.org/10.1007/s12275-015-5314-y
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AbstractAbstract
Chronic HBV infection is the leading cause of liver cirrhosis and hepatic cancer, but the individual responses toward HBV infection are highly variable, ranging from asymptomatic to chronic active hepatitis B inflammation. In this study, we hypothesized that the different individual responses to HBV infection was associated with differences in HBV-specific CD8+ T cell-mediated inflammation and cytotoxicity. Blood samples were collected from subjects with asymptomatic HBV-infection, subjects undergoing active chronic HBV flares (active CHB), and subjects with HBV-infected hepatocellular carcinoma (HBV-HCC). By tetramer staining, we found that all three groups had similar frequencies of HBVspecific CD8+ T cells. However, after HBV peptide stimulation, the HBV-specific CD8+ T cells in asymptomatic subjects had significantly stronger interferon gamma (IFN-γ), tumor necrosis factor alpha (TNF-α), and CD107a expression than those in active CHB and HBV-HCC patients. Examination of surface marker expression revealed that the PD-1-Tim-3- double-negative cell population was the main contributor to HBV-specific inflammation. In active CHB patients and HBV-HCC patients, however, the frequencies of activated PD-1-Tim-3- cells were significantly reduced. Moreover, the serum HBV DNA titer was not correlated with the frequencies of HBV-specific CD8+ T cells but was inversely correlated with the frequencies of IFN-g-expressing and CD107a-express cells in response to HBV stimulation. Together, our data demonstrated that the status of HBVspecific CD8+ T cell exhaustion was associated with different clinical outcomes of chronic HBV infection.

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  • The Adaptive Immune Response in Hepatitis B Virus-Associated Hepatocellular Carcinoma Is Characterized by Dysfunctional and Exhausted HBV-Specific T Cells
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    Viruses.2024; 16(5): 707.     CrossRef
  • Tumor-associated macrophages and CD8+ T cells: dual players in the pathogenesis of HBV-related HCC
    Muhammad Naveed Khan, Binli Mao, Juan Hu, Mengjia Shi, Shunyao Wang, Adeel Ur Rehman, Xiaosong Li
    Frontiers in Immunology.2024;[Epub]     CrossRef
  • The CD8+ T cell exhaustion mechanisms in chronic hepatitis B infection and immunotherapeutic strategies: a systematic review
    Esmaeil Allahmoradi, Ramtin Mohammadi, Peyman Kheirandish Zarandi, Seyed Moayed Alavian, Mohammad Heiat
    Expert Review of Clinical Immunology.2023; 19(6): 671.     CrossRef
  • Increase in Serum Soluble Tim-3 Level Is Related to the Progression of Diseases After Hepatitis Virus Infection
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    Frontiers in Medicine.2022;[Epub]     CrossRef
  • Programmed death 1 expressing CD8+CXCR5+ follicular T cells constitute effector rather than exhaustive phenotype in patients with chronic hepatitis B
    Arshi Khanam, Lydia S. Y. Tang, Shyam Kottilil
    Hepatology.2022; 75(3): 690.     CrossRef
  • Insights into the Relationship between Pentraxin-3 and Cancer
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    International Journal of Molecular Sciences.2022; 23(23): 15302.     CrossRef
  • Hepatitis B Flare in Hepatitis B e Antigen-Negative Patients: A Complicated Cascade of Innate and Adaptive Immune Responses
    Ming-Ling Chang, Yun-Fan Liaw
    International Journal of Molecular Sciences.2022; 23(3): 1552.     CrossRef
  • Soluble programmed cell death-1 predicts hepatocellular carcinoma development during nucleoside analogue treatment
    Ritsuzo Kozuka, Masaru Enomoto, Minh Phuong Dong, Hoang Hai, Le Thi Thanh Thuy, Naoshi Odagiri, Kanako Yoshida, Kohei Kotani, Hiroyuki Motoyama, Etsushi Kawamura, Atsushi Hagihara, Hideki Fujii, Sawako Uchida-Kobayashi, Akihiro Tamori, Norifumi Kawada
    Scientific Reports.2022;[Epub]     CrossRef
  • The Value of Immune System in the Progression of Chronic Hepatitis B
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    Hepatology Research.2020; 50(3): 292.     CrossRef
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    Huan Deng, Xiude Fan, Xiaoyun Wang, Lu Zeng, Kun Zhang, Xiaoge Zhang, Na Li, Qunying Han, Yi Lv, Zhengwen Liu
    Scientific Reports.2020;[Epub]     CrossRef
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    Viruses.2020; 12(9): 1051.     CrossRef
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    International Immunopharmacology.2019; 73: 156.     CrossRef
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    Juzeng Zheng, Zhanfan Ou, Yilun Xu, Ziqiang Xia, Xianfan Lin, Sisi Jin, Yang Liu, Jinming Wu
    Vaccine.2019; 37(18): 2439.     CrossRef
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    Immunology Letters.2019; 213: 39.     CrossRef
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    Immunotherapy.2018; 10(12): 1077.     CrossRef
  • Association of LTBR polymorphisms with chronic hepatitis B virus infection and hepatitis B virus-related hepatocellular carcinoma
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    International Immunopharmacology.2017; 49: 126.     CrossRef
  • The development of hepatocarcinoma after long-term antivirus treatment of Chinese patients with chronic hepatitis B virus infection: Incidence, long-term outcomes and predictive factors
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    Clinics and Research in Hepatology and Gastroenterology.2017; 41(3): 311.     CrossRef
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    PLOS ONE.2016; 11(10): e0164966.     CrossRef
Research Support, Non-U.S. Gov'ts
The hrp pathogenicity island of Pseudomonas syringae pv. tomato DC3000 is induced by plant phenolic acids
Jun Seung Lee , Hye Ryun Ryu , Ji Young Cha , Hyung Suk Baik
J. Microbiol. 2015;53(10):725-731.   Published online October 2, 2015
DOI: https://doi.org/10.1007/s12275-015-5256-4
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AbstractAbstract
Plants produce a wide array of antimicrobial compounds, such as phenolic compounds, to combat microbial pathogens. The hrp PAI is one of the major virulence factors in the plant pathogen, Pseudomonas syringae. A major role of hrp PAI is to disable the plant defense system during bacterial invasion. We examined the influence of phenolic compounds on hrp PAI gene expression at low and high concentrations. There was approximately 2.5 times more hrpA and hrpZ mRNA in PtoDC3000 that was grown in minimal media (MM) supplemented with 10 μM of ortho-coumaric acid than in PtoDC3000 grown in MM alone. On the other hand, a significantly lower amount of hrpA mRNA was observed in bacteria grown in MM supplemented with a high concentration of phenolic compounds. To determine the regulation pathway for hrp PAI gene expression, we performed qRTPCR using gacS, gacA, and hrpS deletion mutants.

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    Plant Disease.2020; 104(8): 2225.     CrossRef
  • Validation of RT-qPCR Approaches to MonitorPseudomonas syringaeGene Expression During Infection and Exposure to Pattern-Triggered Immunity
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  • Multidrug Efflux Pumps at the Crossroad between Antibiotic Resistance and Bacterial Virulence
    Manuel Alcalde-Rico, Sara Hernando-Amado, Paula Blanco, José L. Martínez
    Frontiers in Microbiology.2016;[Epub]     CrossRef
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    PLOS ONE.2016; 11(9): e0163357.     CrossRef
Characterization of the rapamycin-inducible EBV LMP1 activation system
Sang Yong Kim , Jung-Eun Kim , Jiyeon Won , Yoon-Jae Song
J. Microbiol. 2015;53(10):732-738.   Published online October 2, 2015
DOI: https://doi.org/10.1007/s12275-015-5455-z
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AbstractAbstract
Epstein-Barr virus (EBV) latent infection membrane protein 1 (LMP1) is required for EBV-mediated B lymphocyte transformation into proliferating lymphoblastoid cell lines (LCL). LMP1 oligomerizes spontaneously in membrane lipid rafts via its transmembrane domain and constitutively activates signal transduction pathways, including NF-κB, p38 Mitogen-Activated Protein Kinase (MAPK), and c-Jun N-terminal Kinase (JNK). Since LMP1 mimics the tumor necrosis factor receptor (TNFR), CD40, it may be effectively utilized to study the effects of constitutive activation of signal transduction pathways on cellular physiology. On the other hand, LMP1 presents a disadvantage in terms of determining the sequential events and factors involved in signaling pathways. A CD40-LMP1 chimeric molecule has been generated to overcome this limitation but does not represent the authentic and physiological nature of LMP1. In the current study, a ligand-dependent activation system for LMP1 using rapamycin-inducible dimerization was generated to delineate the LMP1 signaling pathway.

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    Molecules.2022; 28(1): 41.     CrossRef
  • Antiviral Activities of Quercetin and Isoquercitrin Against Human Herpesviruses
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    Molecules.2020; 25(10): 2379.     CrossRef
  • Human Cytomegalovirus IE2 86 kDa Protein Induces STING Degradation and Inhibits cGAMP-Mediated IFN-β Induction
    Jung-Eun Kim, Young-Eui Kim, Mark F. Stinski, Jin-Hyun Ahn, Yoon-Jae Song
    Frontiers in Microbiology.2017;[Epub]     CrossRef
  • Primary lymphocyte infection models for KSHV and its putative tumorigenesis mechanisms in B cell lymphomas
    Sangmin Kang, Jinjong Myoung
    Journal of Microbiology.2017; 55(5): 319.     CrossRef
  • Inhibition of human cytomegalovirus immediate-early gene expression and replication by the ethyl acetate (EtOAc) fraction of Elaeocarpus sylvestris in vitro
    Sohee Bae, Se Chan Kang, Yoon-Jae Song
    BMC Complementary and Alternative Medicine.2017;[Epub]     CrossRef
  • Inhibition of varicella-zoster virus replication by an ethanol extract of Lysimachia mauritiana
    Sohee Bae, Yoon-Jae Song
    Molecular Medicine Reports.2017; 15(6): 3847.     CrossRef
Published Erratum
Erratum] Identification of the Vibrio vulnificus htpG Gene and Its Influence on Cold Shock Recovery
Slae Choi , Kyungku Jang , Seulah Choi , Hee-jee Yun , Dong-Hyun Kang
J. Microbiol. 2015;53(10):739-739.
DOI: https://doi.org/10.1007/s12275-015-0740-4
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AbstractAbstract
In the article by Choi et al. published in Journal of Microbiology 2012; 50, 707-711. The 2nd author name of this paper should be corrected as Kyung Ku Jang. The authors should be Slae Choi1†, Kyung Ku Jang1†, Seulah Choi2, Hee-jee Yun2, and Dong-Hyun Kang1*

Journal of Microbiology : Journal of Microbiology
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