- Volume 56(9); September 2018
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Review
- [MINIREVIEW] New perspectives of Lactobacillus plantarum as a probiotic: The gut-heart-brain axis
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Yen-Wenn Liu , Min-Tze Liong , Ying-Chieh Tsai
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J. Microbiol. 2018;56(9):601-613. Published online August 23, 2018
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DOI: https://doi.org/10.1007/s12275-018-8079-2
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Abstract
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Lactobacillus plantarum is a non-gas-producing lactic acid
bacterium that is generally regarded as safe (GRAS) with
Qualified Presumption of Safety (QPS) status. Although traditionally
used for dairy, meat and vegetable fermentation,
L. plantarum is gaining increasing significance as a probiotic.
With the newly acclaimed gut-heart-brain axis, strains of L.
plantarum have proven to be a valuable species for the development
of probiotics, with various beneficial effects on gut
health, metabolic disorders and brain health. In this review,
the classification and taxonomy, and the relation of these
with safety aspects are introduced. Characteristics of L. plantarum
to fulfill the criteria as a probiotic are discussed. Emphasis
are also given to the beneficial functions of L. plantarum
in gut disorders such as inflammatory bowel diseases,
metabolic syndromes, dyslipidemia, hypercholesteromia, obesity,
and diabetes, and brain health aspects involving psychological
disorders.
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International Journal of Biological Macromolecules.2021; 185: 562. CrossRef - Positive metabolic effects of selected probiotic bacteria on diet‐induced obesity in mice are associated with improvement of dysbiotic gut microbiota
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PLOS ONE.2020; 15(11): e0241447. CrossRef - Lactobacillus-derived metabolites enhance the antitumor activity of 5-FU and inhibit metastatic behavior in 5-FU-resistant colorectal cancer cells by regulating claudin-1 expression
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Journal Articles
- Aestuariibaculum marinum sp. nov., a marine bacterium isolated from seawater in South Korea
-
Jiwon Choi , Dongwook Lee , Jun Hyeong Jang , Seho Cha , Taegun Seo
-
J. Microbiol. 2018;56(9):614-618. Published online August 23, 2018
-
DOI: https://doi.org/10.1007/s12275-018-8134-z
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44
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10
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Abstract
-
A Gram-negative, non-motile, aerobic bacterium, designated
strain IP7T, was isolated from seawater at the shore of the
Incheon Eulwang-ri beach, South Korea. Cells of strain IP7T
are straight or slightly rod-shaped and colonies are round,
convex and orange-yellow. Strain IP7T is flexirubin-negative,
mild halophile, catalase- and oxidase-positive, and produces
a yellow-orange carotenoid pigment. Growth is optimal
at 30°C, pH 7–9, and 2.0–4.0% NaCl (w/v). On the basis
of 16S rRNA gene sequence similarity, strain IP7T is affiliated
with genus Aestuariibaculum in the family Flavobacteriaceae,
the closest relative being Aestuariibaculum suncheonense
SC17T (98.3% sequence similarity). The DNA G + C
content of the novel strain is 37.4 mol%. The only quinone is
MK-6 menaquinone. Iso-branched C15:0, iso-branched C15:1
G, and iso-branched C17:0 3-OH are major fatty acids. The
major polar lipids are phosphatidylethanolamine, an unidentified
aminoglycolipid and two unidentified glycolipids.
The DNA-DNA hybridization value of strain IP7T with Aestuariibaculum
suncheonense SC17T is 28.87%. Based on the collective
DNA-DNA hybridization, biochemical, phylogenetic
and physiological data, we report a novel species of the genus
Aestuariibaculum for which the name Aestuariibaculum marinum
sp. nov. is proposed. The type strain is IP7T (= KCTC
52521T = JCM 31725T).
-
Citations
Citations to this article as recorded by

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Marixanthotalea marina gen. nov., sp. nov., a bacterium in the family Flavobacteriaceae isolated from seawater
Zi-Yue Fu, Hua-Peng Xue, Wei He, Guang-Yuan Ma, Ai Hua Zhang, Dao-Feng Zhang, Wen-Jun Li
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Complete genome sequence of carotenoid-producing Aestuariibaculum lutulentum L182T isolated from the tidal sediment
Wen-Jia Liu, Jia-Wei Gao, Yu Zhang, Cong Sun, Lin Xu
Marine Genomics.2023; 72: 101074. CrossRef - Aestuariibaculum lutulentum sp. nov., a marine bacterium isolated from coastal sediment in Beihai
Jia-Wei Gao, Dong-Yan He, Wen-Wu Zhang, Yu-Ruo Wang, Yue Su, Jun-Jie Ying, Zhi-Cheng Wu, Wu Qu, Lin Xu, Cong Sun
Archives of Microbiology.2023;[Epub] CrossRef - Aestuariibaculum sediminum sp. nov., a marine bacterium isolated from a tidal flat in Zhoushan
Zhi-Cheng Wu, Xin-Yin Zhang, Cong Sun, Lin Xu, Ge-Yi Fu, Xue-Wei Xu
Archives of Microbiology.2021; 203(6): 2953. CrossRef - The Methods of Digging for “Gold” within the Salt: Characterization of Halophilic Prokaryotes and Identification of Their Valuable Biological Products Using Sequencing and Genome Mining Tools
Jakub Lach, Paulina Jęcz, Dominik Strapagiel, Agnieszka Matera-Witkiewicz, Paweł Stączek
Genes.2021; 12(11): 1756. CrossRef - Snuella sedimenti sp. nov., isolated from marine sediment
Jong-Hwa Kim, Veeraya Weerawongwiwat, Jung-Hoon Yoon, Jung-Sook Lee, Ampaitip Sukhoom, Wonyong Kim
Archives of Microbiology.2021; 203(9): 5437. CrossRef -
Adhaeribacter rhizoryzae sp. nov., a fibrillar matrix-producing bacterium isolated from the rhizosphere of rice plant
Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Byungjo Lee, Wonhee Jang, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(10): 5382. CrossRef - List of new names and new combinations previously effectively, but not validly, published
Aharon Oren, George M. Garrity
International Journal of Systematic and Evolutionary Microbiology.2019; 69(1): 5. CrossRef - Flavobacterium humi sp. nov., a flexirubin-type pigment producing bacterium, isolated from soil
Inhyup Kim, Jiyoun Kim, Geeta Chhetri, Taegun Seo
Journal of Microbiology.2019; 57(12): 1079. CrossRef - Paraburkholderia lacunae sp. nov., isolated from soil near an artificial pond
Tingye Feng, Sang Eun Jeong, Jin Ju Lim, Seogang Hyun, Che Ok Jeon
Journal of Microbiology.2019; 57(4): 232. CrossRef
- Bacteroides sedimenti sp. nov., isolated from a chloroethenesdechlorinating consortium enriched from river sediment
-
Mohamed Ismaeil , Naoko Yoshida , Arata Katayama
-
J. Microbiol. 2018;56(9):619-627. Published online August 23, 2018
-
DOI: https://doi.org/10.1007/s12275-018-8187-z
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44
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25
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Abstract
-
A Gram-negative, anaerobic, non-motile, non-spore-forming
bacterial strain, designated YN3PY1T, was isolated from a
chloroethene-dechlorinating consortium originally enriched
from river sediment. The strain enhanced the dechlorination
of cis-dichloroethene to ethene by Dehalococcoides, especially
at the early stages of cultivation. Strain YN3PY1T was
the first isolate of the genus Bacteroides, obtained from animal-
independent environments, and its 16S rRNA gene had
the highest sequence similarity (97.1%) with Bacteroides luti
JCM 19020T in the ‘Coprosuis’ clade of the genus Bacteroides.
Strain YN3PY1T formed a phylogenetic cluster with other
phylotypes detected from sediments and paddy soil, and the
cluster was affiliated with a linage of so-called free-living
Bacteroides detected from animal-independent environments,
suggesting specific adaptations to sediment-like environments.
The strain showed typical phenotypes of Bacteroides, i.e.,
polysaccharolytic anaerobe having anteiso-C15:0 as the most
abundant fatty acid and MK-11 as one of the major respiratory
quinones. Additionally, the strain uniquely transforms
glucose to lactate and malate, has MK-12 as another major
respiratory quinone, and grows at comparatively low temperatures,
i.e. 10–40°C, with an optimum at 28°C. Based on
the presented data, strain YN3PY1T (= KCTC 15656T = NBRC
113168T) can be proposed as a novel species of the genus
Bacteroides and named as Bacteroides sedimenti sp. nov.
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Li Xie, Naoko Yoshida, Lingyu Meng
Microorganisms.2023; 11(2): 349. CrossRef - Resuscitation-Promoting Factor Accelerates Enrichment of Highly Active Tetrachloroethene/Polychlorinated Biphenyl-Dechlorinating Cultures
Xiaomei Su, Mengqi Xie, Zhen Han, Yeyuan Xiao, Rui Wang, Chaofeng Shen, Muhammad Zaffar Hashmi, Faqian Sun, Isaac Cann
Applied and Environmental Microbiology.2023;[Epub] CrossRef - Soil microorganisms facilitated the electrode-driven trichloroethene dechlorination to ethene by Dehalococcoides species in a bioelectrochemical system
Lingyu Meng, Naoko Yoshida, Zhiling Li
Environmental Research.2022; 209: 112801. CrossRef - Dehalococcoides mccartyi NIT01, a novel isolate, dechlorinates high concentrations of chloroethenes by expressing at least six different reductive dehalogenases
Masaki Asai, Naoko Yoshida, Toshiya Kusakabe, Mohamed Ismaeil, Takumi Nishiuchi, Arata Katayama
Environmental Research.2022; 207: 112150. CrossRef - Analysis of the gut microbiota composition of myostatin mutant cattle prepared using CRISPR/Cas9
Tong Wen, Chenyu Mao, Li Gao, Guangyuan He
PLOS ONE.2022; 17(3): e0264849. CrossRef - Bacteroides humanifaecis sp. nov., isolated from faeces of healthy Korean
Han Sol Kim, Ji-Sun Kim, Min Kuk Suh, Mi Kyung Eom, Ju Huck Lee, Seung-Hwan Park, Se Won Kang, Dong Ho Lee, Hyuk Yoon, Je Hee Lee, Jung-Sook Lee
Archives of Microbiology.2022;[Epub] CrossRef - Formate: A Promising Hydrogen Donor to Enhance Trichloroethene-to-Ethene Dechlorination in Dehaococcoides-Augmented Groundwater Ecosystem with Minimal Potential Prokaryotic Risks
Ryuya Tomita, Naoko Yoshida, Lingyu Meng
SSRN Electronic Journal.2022;[Epub] CrossRef - Assessing the enhanced reduction effect with the addition of sulfate based P inactivating material during algal bloom sedimentation
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Chemical Engineering Journal Advances.2022; 12: 100359. CrossRef - Formate: A promising electron donor to enhance trichloroethene-to-ethene dechlorination in Dehalococcoides-augmented groundwater ecosystems with minimal bacterial growth
Ryuya Tomita, Naoko Yoshida, Lingyu Meng
Chemosphere.2022; 307: 136080. CrossRef - Isolation and Polyphasic Characterization of Desulfuromonas versatilis sp. Nov., an Electrogenic Bacteria Capable of Versatile Metabolism Isolated from a Graphene Oxide-Reducing Enrichment Culture
Li Xie, Naoko Yoshida, Shun’ichi Ishii, Lingyu Meng
Microorganisms.2021; 9(9): 1953. CrossRef - Growth inhibition of methanogens for the enhancement of TCE dechlorination
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Gut Pathogens.2021;[Epub] CrossRef - Haloferax litoreum sp. nov., Haloferax marinisediminis sp. nov., and Haloferax marinum sp. nov., low salt-tolerant haloarchaea isolated from seawater and sediment
Eui-Sang Cho, In-Tae Cha, Seong Woon Roh, Myung-Ji Seo
Antonie van Leeuwenhoek.2021; 114(12): 2065. CrossRef -
Bacteroides luhongzhouii sp. nov. and Bacteroides zhangwenhongii sp. nov., isolated from human faeces
Yajun Ge, Gui Zhang, Jing Yang, Xin-He Lai, Dong Jin, Shan Lu, Ji Pu, Ying Huang, Xuelian Luo, Han Zheng, Xiaoyan Zhang, Jianguo Xu
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Biodegradation of aromatic hydrocarbons using microbial adsorbed bioreactor
Dhanya Vijayan
3 Biotech.2020;[Epub] CrossRef - Bioremediation of typical chlorinated hydrocarbons by microbial reductive dechlorination and its key players: A review
Zhixing Xiao, Wei Jiang, Dan Chen, Yan Xu
Ecotoxicology and Environmental Safety.2020; 202: 110925. CrossRef - Haloplanus rubicundus sp. nov., an extremely halophilic archaeon isolated from solar salt
Yeon Bee Kim, Joon Yong Kim, Hye Seon Song, Se Hee Lee, Na-Ri Shin, Jin-Woo Bae, Jinjong Myoung, Ki-Eun Lee, In-Tae Cha, Jin-Kyu Rhee, Seong Woon Roh
Systematic and Applied Microbiology.2020; 43(3): 126085. CrossRef - Characterization of a potential probiotic bacterium Lactococcus raffinolactis WiKim0068 isolated from fermented vegetable using genomic and in vitro analyses
Min Young Jung, Changsu Lee, Myung-Ji Seo, Seong Woon Roh, Se Hee Lee
BMC Microbiology.2020;[Epub] CrossRef - Preparation and characterization of site-specific dechlorinating microbial inocula capable of complete dechlorination enriched in anaerobic microcosms amended with clay mineral
Zsuzsanna Nagymáté, Laura Jurecska, Csaba Romsics, Fanni Tóth, Viktória Bódai, Éva Mészáros, Attila Szabó, Balázs Erdélyi, Károly Márialigeti
World Journal of Microbiology and Biotechnology.2020;[Epub] CrossRef -
Highly Specific Sewage-Derived
Bacteroides
Quantitative PCR Assays Target Sewage-Polluted Waters
Shuchen Feng, Sandra L. McLellan, Christopher A. Elkins
Applied and Environmental Microbiology.2019;[Epub] CrossRef - Construction and Evaluation of a Korean Native Microbial Consortium for the Bioremediation of Diesel Fuel-Contaminated Soil in Korea
Yunho Lee, Sang Eun Jeong, Moonsuk Hur, Sunghwan Ko, Che Ok Jeon
Frontiers in Microbiology.2018;[Epub] CrossRef
- Fluorescence change of Fusobacterium nucleatum due to Porphyromonas gingivalis
-
Min-Ah Lee , Si-Mook Kang , Se-Yeon Kim , Ji-Soo Kim , Jin-Bom Kim , Seung-Hwa Jeong
-
J. Microbiol. 2018;56(9):628-633. Published online August 23, 2018
-
DOI: https://doi.org/10.1007/s12275-018-7515-7
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44
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3
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Abstract
-
The aim of this study was to measure changes in the fluorescence
of Fusobacterium nucleatum interacting with Porphyromonas
gingivalis for excitation with blue light at 405-nm.
P. gingivalis was mono- and co-cultivated in close proximity
with F. nucleatum. The fluorescence of the bacterial colonies
was photographed using a QLF-D (Quantitative Light-induced
Fluorescence-Digital) Biluminator camera system with
a 405 nm light source and a specific filter. The red, green and
blue intensities of fluorescence images were analyzed using
the image analysis software. A fluorescence spectrometer was
used to detect porphyrin synthesized by each bacterium. F.
nucleatum, which emitted green fluorescence in single cultures,
showed intense red fluorescence when it was grown
in close proximity with P. gingivalis. F. nucleatum co-cultivated
with P. gingivalis showed the same pattern of fluorescence
peaks as for protoporphyrin IX in the red part of
the spectrum. We conclude that the green fluorescence of
F. nucleatum can change to red fluorescence in the presence
of adjacent co-cultured with P. gingivalis, indicating that
the fluorescence character of each bacterium might depend
on the presence of other bacteria.
-
Citations
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- Red/Orange Autofluorescence in Selected Candida Strains Exposed to 405 nm Laser Light
Rafał Wiench, Dariusz Paliga, Anna Mertas, Elżbieta Bobela, Anna Kuśka-Kiełbratowska, Sonia Bordin-Aykroyd, Aleksandra Kawczyk-Krupka, Kinga Grzech-Leśniak, Monika Lukomska-Szymanska, Edward Lynch, Dariusz Skaba
Dentistry Journal.2024; 12(3): 48. CrossRef - Autofluorescence Detection Method for Dental Plaque Bacteria Detection and Classification: Example of Porphyromonas gingivalis, Aggregatibacter actinomycetemcomitans, and Streptococcus mutans
Yung-Jhe Yan, Bo-Wen Wang, Chih-Man Yang, Ching-Yi Wu, Mang Ou-Yang
Dentistry Journal.2021; 9(7): 74. CrossRef - Fluorescence image and microbiological analysis of biofilm retained around healthy and inflamed orthodontic miniscrews
A.S. Garcez, L.C. Barros, M.R.U. Fernandes, D.N. Fujii, S.S. Suzuki, R. Nepomuceno
Photodiagnosis and Photodynamic Therapy.2020; 30: 101707. CrossRef
- Variation of cassiicolin genes among Chinese isolates of Corynespora cassiicola
-
Jun Wu , Xuewen Xie , Yanxia Shi , Ali Chai , Qi Wang , Baoju Li
-
J. Microbiol. 2018;56(9):634-647. Published online July 27, 2018
-
DOI: https://doi.org/10.1007/s12275-018-7497-5
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43
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11
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Abstract
-
Corynespora cassiicola is a species of fungus that is a plant
pathogen of many agricultural crop plants, including severe
target spot disease on cucumber. Cassiicolin is an important
effector of pathogenicity of this fungus. In this study, we
collected 141 Corynespora isolates from eighteen hosts, and
the casscolin gene was detected in 82 C. cassiicola strains.
The deduced protein sequences revealed that 72 isolates
contained the Cas2 gene, two strains from Gynura bicolor
harboured the Cas2.2 gene, and 59 isolates without a cassiicolin
gene were classified as Cas0. Phylogenetic analyses was
performed for the 141 isolates using four loci (ITS, ga4, caa5,
and act1) and revealed two genetic clusters. Cluster A is composed
of four subclades: subcluster A1 includes all Cas2
isolates plus 18 Cas0 strains, subcluster A2 includes the eight
Cas5 isolates and one Cas0 isolate, and subclusters A3 and
A4 contain Cas0 strains. Cluster B consists of 21 Cas0 isolates.
Twenty-two C. cassiicola strains from different toxin
classes showed varying degrees of virulence against cucumber.
Cas0 or Cas2 strains induced diverse responses on cucumber,
from no symptoms to symptoms of moderate or severe
infection, but all Cas5 isolates exhibited avirulence on cucumber.
-
Citations
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- Diversity of cassiicolin profiles and culture filtrate toxicity of Corynespora cassiicola isolates from South Indian rubber plantations
Reshma T R, Shilpa Babu, Vineeth V K, Shaji Philip
Industrial Crops and Products.2025; 224: 120243. CrossRef - The Diseases and Pests of Rubber Tree and Their Natural Control Potential: A Bibliometric Analysis
Liqiong Chen, Lidan Xu, Xiaona Li, Yilin Wang, Yun Feng, Guixiu Huang
Agronomy.2023; 13(8): 1965. CrossRef - Need for disease resistance breeding against Corynespora cassiicola in crops
Edgar Sierra-Orozco, German Sandoya, Seonghee Lee, Gary Vallad, Samuel Hutton
Frontiers in Agronomy.2023;[Epub] CrossRef - Comparison and Correlation of Corynespora cassiicola Populations from Kiwifruit and Other Hosts Based on Morphology, Phylogeny, and Pathogenicity
Jing Xu, Guoshu Gong, Yongliang Cui, Yuhang Zhu, Jun Wang, Kaikai Yao, Wen Chen, Cuiping Wu, Rui Yang, Xiaodan Yang, Pan Li, Henan Zhao, Sen Zhong, Yi Luo, Yue Li, Wenfei Liao
Plant Disease.2023; 107(7): 1979. CrossRef - Unraveling the Host-Selective Toxic Interaction of Cassiicolin with Lipid Membranes and Its Cytotoxicity
Kien Xuan Ngo, Phuong Doan N. Nguyen, Hirotoshi Furusho, Makoto Miyata, Tomomi Shimonaka, Nguyen Ngoc Bao Chau, Nguyen Phuong Vinh, Nguyen Anh Nghia, Tareg Omer Mohammed, Takehiko Ichikawa, Noriyuki Kodera, Hiroki Konno, Takeshi Fukuma, Nguyen Bao Quoc
Phytopathology®.2022; 112(7): 1524. CrossRef - The necrosis- and ethylene-inducing peptide 1-like protein (NLP) gene family of the plant pathogen Corynespora cassiicola
Thaís Carolina da Silva Dal’Sasso, Vinícius Delgado da Rocha, Hugo Vianna Silva Rody, Maximiller Dal-Bianco Lamas Costa, Luiz Orlando de Oliveira
Current Genetics.2022; 68(5-6): 645. CrossRef - Identification and virulence evaluation of Corynespora cassiicola cassiicolin-encoding gene isolates from rubber trees in Vietnam
Nguyen Ngoc Bao Chau, Nguyen Van Minh, Nguyen Mai Nghiep, Nguyen Phuong Vinh, Nguyen Anh Nghia, Nguyen Bao Quoc
Tropical Plant Pathology.2022; 47(3): 378. CrossRef - The fungal pathogen Corynespora cassiicola: A review and insights for target spot management on cotton and Soya bean
Marina N. Rondon, Kathy Lawrence
Journal of Phytopathology.2021; 169(6): 329. CrossRef - Mitogenome-wide comparison and phylogeny reveal group I intron dynamics and intraspecific diversification within the phytopathogen Corynespora cassiicola
Qingzhou Ma, Haiyan Wu, Yuehua Geng, Qiang Li, Rui Zang, Yashuang Guo, Chao Xu, Meng Zhang
Computational and Structural Biotechnology Journal.2021; 19: 5987. CrossRef - Genomic Characteristics and Comparative Genomics Analysis of Two Chinese Corynespora cassiicola Strains Causing Corynespora Leaf Fall (CLF) Disease
Boxun Li, Yang Yang, Jimiao Cai, Xianbao Liu, Tao Shi, Chaoping Li, Yipeng Chen, Pan Xu, Guixiu Huang
Journal of Fungi.2021; 7(6): 485. CrossRef - Endophytes from Wild Rubber Trees as Antagonists of the Pathogen Corynespora cassiicola
Valérie Pujade-Renaud, Marine Déon, Romina Gazis, Sébastien Ribeiro, Florence Dessailly, Françoise Granet, Priscila Chaverri
Phytopathology®.2019; 109(11): 1888. CrossRef
- SucA-dependent uptake of sucrose across the outer membrane of Caulobacter crescentus
-
Samantha K. Modrak , Martha E. Melin , Lisa M. Bowers
-
J. Microbiol. 2018;56(9):648-655. Published online July 27, 2018
-
DOI: https://doi.org/10.1007/s12275-018-8225-x
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41
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4
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Abstract
-
Caulobacter crescentus is an aquatic Gram-negative bacterium
that lives in nutrient-poor environments. Like several
other aquatic and phytopathogenic bacteria, Caulobacter cells
have a relatively large number of genes predicted to encode
TonB-dependent receptors (TBDRs). TBDRs transport nutrients
across the outer membrane using energy from the proton
motive force. We identified one TBDR gene, sucA, which
is situated within a cluster of genes predicted to encode a lacIfamily
transcription factor (sucR), amylosucrase (sucB), fructokinase
(sucC), and an inner membrane transporter (sucD).
Given its genomic neighborhood, we proposed that sucA
encodes a transporter for sucrose. Using RT-qPCR, we determined
that expression of sucABCD is strongly induced by
sucrose in the media and repressed by the transcription factor,
SucR. Furthermore, cells with a deletion of sucA have a
reduced uptake of sucrose. Although cells with a non-polar
deletion of sucA can grow with sucrose as the sole carbon
source, cells with a polar deletion that eliminates expression
of sucABCD cannot grow with sucrose as the sole carbon
source. These results show that the suc locus is essential for
sucrose utilization while SucA functions as one method of
sucrose uptake in Caulobacter crescentus. This work sheds
light on a new carbohydrate utilization locus in Caulobacter
crescentus.
-
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Journal of Hazardous Materials.2021; 404: 124037. CrossRef - iTRAQ analysis reveals the effect of gabD and sucA gene knockouts on lysine metabolism and crystal protein formation in Bacillus thuringiensis
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-
Jingjing Sun , Wei Wang , Congyu Yao , Fangqun Dai , Xiangjie Zhu , Junzhong Liu , Jianhua Hao
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J. Microbiol. 2018;56(9):656-664. Published online August 23, 2018
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DOI: https://doi.org/10.1007/s12275-018-8018-2
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43
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35
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Abstract
-
A novel gene (bgl) encoding a cold-adapted β-glucosidase
was cloned from the marine bacterium Alteromonas sp.
L82. Based on sequence analysis and its putative catalytic
conserved region, Bgl belonged to the glycoside hydrolase
family 1. Bgl was overexpressed in E. coli and purified by
Ni2+ affinity chromatography. The purified recombinant β-
glucosidase showed maximum activity at temperatures between
25°C to 45°C and over the pH range 6 to 8. The enzyme
lost activity quickly after incubation at 40°C. Therefore,
recombinant β-glucosidase appears to be a cold-adapted
enzyme. The addition of reducing agent doubled its activity
and 2 M NaCl did not influence its activity. Recombinant
β-glucosidase was also tolerant of 700 mM glucose and some
organic solvents. Bgl had a Km of 0.55 mM, a Vmax of 83.6
U/mg, a kcat of 74.3 s-1 and kcat/Km of 135.1 at 40°C, pH 7 with
4-nitrophenyl-β-D-glucopyranoside as a substrate. These
properties indicate Bgl may be an interesting candidate for
biotechnological and industrial applications.
-
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- Comparison of virulence between matt and mucoid colonies of Klebsiella pneumoniae coproducing NDM-1 and OXA-232 isolated from a single patient
-
Haejeong Lee , Jin Yang Baek , So Yeon Kim , HyunJi Jo , KyeongJin Kang , Jae-Hoon Ko , Sun Young Cho , Doo Ryeon Chung , Kyong Ran Peck , Jae-Hoon Song , Kwan Soo Ko
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J. Microbiol. 2018;56(9):665-672. Published online August 23, 2018
-
DOI: https://doi.org/10.1007/s12275-018-8130-3
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47
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20
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Abstract
-
Nine Klebsiella pneumoniae isolates coproducing NDM-1
and OXA-232 carbapenemases were successively isolated
from a single patient. Although they were isolated simultaneously
and were isogenic, they presented different colony
phenotypes (matt and mucoid). All nine isolates were resistant
to most antibiotics except colistin and fosfomycin. In
addition, matt-type isolates were resistant to tigecycline. No
differences were detected in the cps cluster sequences, except
for the insertion of IS5 in the wzb gene of two matt-type isolates.
In vitro virulence assays based on production of capsular
polysaccharide, biofilm formation, and resistance to
human serum indicated that the mucoid-type isolates were
significantly more virulent than the matt-type. In addition,
mucoid-type isolates showed higher survival rates than the
matt-type ones in infection experiments in the fruit fly, suggesting
a higher virulence of K. pneumoniae isolates with a
mucoid phenotype. To our knowledge, this is the first report
of K. pneumoniae colonies with different phenotypes being
isolated from the same sample. In addition, we show that virulence
varies with colony phenotype. Dissemination of K.
pneumoniae isolates expressing both antibiotic resistance
and high virulence would constitute a great threat.
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typing
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Genetic, virulence, and antimicrobial resistance characteristics associated with distinct morphotypes in ST11 carbapenem-resistant
Klebsiella pneumoniae
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Jee Hong Kim, Yun Young Cho, Ji Young Choi, Yu Mi Wi, Kwan Soo Ko
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Jin Seok Kim, Chae-Kyu Hong, Sang-Hun Park, Young-Hee Jin, Sunghee Han, Hee Soon Kim, Joo-Hyun Park, Byung-Noe Bae, Ju-Young Chung, Tae-Hee Han, Jib-Ho Lee, Sang-Me Lee, Young-Hee Oh
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International Journal of Medical Microbiology.2019; 309(3-4): 194. CrossRef
- Diet-induced obese mice exhibit altered immune responses to early Salmonella Typhimurium oral infection
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Ricardo Ernesto Ramírez-Orozco , Elena Franco Robles , Victoriano Pérez Vázquez , Joel Ramírez Emiliano , Marco Antonio Hernández Luna , Sergio López Briones
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J. Microbiol. 2018;56(9):673-682. Published online August 23, 2018
-
DOI: https://doi.org/10.1007/s12275-018-8083-6
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43
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7
Crossref
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Abstract
-
Obesity is a chronic disease associated with different metabolic
diseases as well as alterations in immune cell function.
It is characterized by a chronic systemic low grade inflammation.
There are several studies demonstrating the influence
of obesity on the impaired immune response to infection.
However, it is not completely clear whether the obese environment
influences the development or maintenance of the
immune response against infections. The aim of this study
was to determine how obesity induced by a high-fat diet affects
the immune response to an early oral Salmonella infection.
Four groups of mice were kept in separate cages. Two of
these designated as controls, fed with a normal diet; whereas
other two groups were fed with a high fat diet for 10 weeks.
Some mice were used for Salmonella oral infection. After 7
days of oral infection with S. Thypimurium the proportions
of spleen cell subsets expressing activation markers in normal
diet and HFD obese mice were stained with monoclonal
antibodies and analyzed by flow cytometry. Also, mRNA
levels of different cytokines were quantified by RT-PCR. It
was found that obesity affects the function of the immune
system against an early oral Salmonella infection, decreasing
NK cells, altering the expression of activation molecules as
well as cytokines mRNA levels. Interestingly, the expression
some activation molecules on T lymphocytes was reestablished
after Salmonella infection, but not the CD25 expression.
Immune alterations could lead to immunosuppression
or increased susceptibility to infections in HFD obese mice.
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Samuel Philip Nobs, Niv Zmora, Eran Elinav
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- Antiviral activity of Schizonepeta tenuifolia Briquet against noroviruses via induction of antiviral interferons
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Yee Ching Ng , Ye Won Kim , Jeong-Su Lee , Sung Joon Lee , Moon Jung Song
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J. Microbiol. 2018;56(9):683-689. Published online August 23, 2018
-
DOI: https://doi.org/10.1007/s12275-018-8228-7
-
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45
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0
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16
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Abstract
-
Human noroviruses are the causative agents of non-bacterial
gastroenteritis worldwide. The rapid onset and resolution of
disease symptoms suggest that innate immune responses are
critical for controlling norovirus infection; however, no effective
antivirals are yet available. The present study was conducted
to examine the antiviral activities of Schizonepeta
tenuifolia Briquet extract (STE) against noroviruses. Treatment
of human norovirus replicon-bearing HG23 cells with
STE at 5 and 10 mg/ml concentrations resulted in the reduction
in the viral RNA levels by 77.2% and 85.9%, respectively.
STE had no cytotoxic effects on HG23 cells. Treatment of
RAW 264.7 cells infected with murine norovirus 1 (MNV-1),
a surrogate virus of human noroviruses, with STE at 10 and
20 μg/ml concentrations resulted in the reduction of viral
replication by 58.5% and 84.9%, respectively. STE treatment
induced the expression of mRNAs for type I and type II interferons
in HG23 cells and upregulated the transcription of
interferon-β in infected RAW 264.7 cells via increased phosphorylation
of interferon regulatory factor 3, a critical transcription
regulator for type I interferon production. These
results
suggest that STE inhibits norovirus replication through
the induction of antiviral interferon production during virus
replication and may serve as a candidate antiviral substance
for treatment against noroviruses.
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Retraction of Publication
- [Retraction Note] Interferon-mediated antiviral activities of Angelica tenuissima Nakai and its active components
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Prasanna Weeratunga , Md Bashir Uddin , Myun Soo Kim , Byeong-Hoon Lee , Tae-Hwan Kim , Ji-Eun Yoon , Jin Yeul Ma , Hongik Kim , Jong-Soo Lee
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J. Microbiol. 2018;56(9):690-690.
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DOI: https://doi.org/10.1007/s12275-018-0579-6
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Abstract
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The above article by Weeratunga et al. has been retracted from Journal of Microbiology at the request of the corresponding
author. The authors found that they were unable to reproduce Figure 1, Figure 3(A), Figure 4(A) and Figure 7(D) presented in
this paper. All of the authors agreed to this retraction. The authors regret any inconvenience that this may cause and apologize
sincerely to the readers, reviewers, and editors of Journal of Microbiology.
Published Erratum
- Erratum] Variation of cassiicolin genes among Chinese isolates of Corynespora cassiicola
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Jun Wu , Xuewen Xie , Yanxia Shi , Ali Chai , Qi Wang , Baoju Li
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J. Microbiol. 2018;56(9):691-691.
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DOI: https://doi.org/10.1007/s12275-018-8580-7
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Abstract
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In the online published article by Wu et al. since 30 July 2018, the figure 4 is unfortunately incorrect. The figure 4 should be
corrected as below.
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Citations
Citations to this article as recorded by

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Valérie Pujade-Renaud, Marine Déon, Romina Gazis, Sébastien Ribeiro, Florence Dessailly, Françoise Granet, Priscila Chaverri
Phytopathology®.2019; 109(11): 1888. CrossRef