Journal Article
- UBCG: Up-to-date bacterial core gene set and pipeline for phylogenomic tree reconstruction
-
Seong-In Na , Yeong Ouk Kim , Seok-Hwan Yoon , Sung-min Ha , Inwoo Baek , Jongsik Chun
-
J. Microbiol. 2018;56(4):280-285. Published online February 28, 2018
-
DOI: https://doi.org/10.1007/s12275-018-8014-6
-
-
47
View
-
0
Download
-
1,018
Crossref
-
Abstract
-
Genome-based phylogeny plays a central role in the future
taxonomy and phylogenetics of Bacteria and Archaea by
replacing 16S rRNA gene phylogeny. The concatenated core
gene alignments are frequently used for such a purpose. The
bacterial core genes are defined as single-copy, homologous
genes that are present in most of the known bacterial species.
There have been several studies describing such a gene set, but
the number of species considered was rather small. Here we
present the up-to-date bacterial core gene set, named UBCG,
and software suites to accommodate necessary steps to generate
and evaluate phylogenetic trees. The method was successfully
used to infer phylogenomic relationship of Escherichia
and related taxa and can be used for the set of genomes at any
taxonomic ranks of Bacteria. The UBCG pipeline and file
viewer are freely available at https://www.ezbiocloud.net/
tools/ubcg and https://www.ezbiocloud.net/tools/ubcg_viewer,
respectively.
-
Citations
Citations to this article as recorded by

- Unveiling novel antimicrobial peptides from the ruminant gastrointestinal microbiomes: A deep learning-driven approach yields an anti-MRSA candidate
Hong Shen, Yanru Li, Qingjie Pi, Junru Tian, Xianghan Xu, Zan Huang, Jinghu Huang, Cong Pian, Shengyong Mao
Journal of Advanced Research.2025;[Epub] CrossRef - Altererythrobacter arenosus sp. nov., Isolated from Marine Sediment
Soyeon Ahn, Yunjeong Lee, Veeraya Weerawongwiwat, Jong-Hwa Kim, Jung-Sook Lee, Jung-Hoon Yoon, Ampaitip Sukhoom, Wonyong Kim
Current Microbiology.2025;[Epub] CrossRef - A metagenomic ‘dark matter’ enzyme catalyses oxidative cellulose conversion
Clelton A. Santos, Mariana A. B. Morais, Fernanda Mandelli, Evandro A. Lima, Renan Y. Miyamoto, Paula M. R. Higasi, Evandro A. Araujo, Douglas A. A. Paixão, Joaquim M. Junior, Maria L. Motta, Rodrigo S. A. Streit, Luana G. Morão, Claudio B. C. Silva, Luci
Nature.2025;[Epub] CrossRef -
Paenibacillus zeirhizosphaerae sp. nov., isolated from surface of the maize (Zea mays) roots in a horticulture field, Hungary
Dalma Márton, Milán Farkas, Anna Bedics, Erika Tóth, András Táncsics, Károly Bóka, Gergely Maróti, Erzsébet Baka, Balázs Kriszt, Mátyás Cserháti
International Journal of Systematic and Evolutionary Microbiology
.2025;[Epub] CrossRef - Characterisation of Aequorivita ciconiae sp. nov., isolated from oriental stork, Ciconia boyciana
Jeong-Eun Han, Seomin Kang, So-Yeon Lee, Jin-Woo Bae
Antonie van Leeuwenhoek.2025;[Epub] CrossRef - Genomic insights into Marinospirillum alkalitolerans sp. nov., a novel PHB producing bacterium from an Indian impact crater, and an emended description of family Oceanospirillaceae
Amaraja Joshi, Sonia Thite, Devika Godbole, Dibyajyoti Boruah, Dev Kant Sindhu, Atharva Prabhu, Neetha Joseph, Amit Yadav, Avinash Sharma, Tushar Lodha
Antonie van Leeuwenhoek.2025;[Epub] CrossRef - Cerasicoccus fimbriatus sp. nov., isolated from the mid-ridge of the Southwest Indian Ocean
Xuanyun Qiu, Beihan Chen, Dan Lin, Guohua Liu, Zhiyi Su, Mingzhe Zhang, Kai Tang
Antonie van Leeuwenhoek.2025;[Epub] CrossRef - Thiobacillus sedimenti sp. nov., a chemolithoautotrophic sulphur-oxidizing bacterium isolated from freshwater sediment
Chenming Dai, Guangye Zhang, Weitie Lin, Jianfei Luo
Antonie van Leeuwenhoek.2025;[Epub] CrossRef - Arvimicrobium flavum gen. nov., sp. nov., A Novel Genus in the Family Phyllobacteriaceae Isolated From Forest Soil
Hyosun Lee, Dhiraj Kumar Chaudhary, Ki-Eun Lee, In-Tae Cha, Won-Jae Chi, Sunho Park, Taegun Seo, Dong-Uk Kim
Current Microbiology.2025;[Epub] CrossRef - Flavobacterium arundinis sp. nov., Flavobacterium calami sp. nov., Flavobacterium helocola sp. nov. and Flavobacterium flavipallidum sp. nov., isolated from stagnant water in a clump of Phragmites japonica Steud
Sunho Park, Inhyup Kim, Haejin Woo, Hyunji Lee, Subin Yook, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2025;[Epub] CrossRef - Facivitalis istanbulensis gen. nov., sp. nov., a novel member of the family Sphingomonadaceae with the potential for aromatic-degradation isolated from Jet A1 fuel
Simge Arkan-Ozdemir, Miray Üstüntürk-Onan, Esra Ilhan-Sungur
Antonie van Leeuwenhoek.2025;[Epub] CrossRef -
Streptacidiphilus alkalitolerans sp. nov., Streptacidiphilus cavernicola sp. nov. and Streptacidiphilus jeojiensis sp. nov. isolated from a cave, and an emended description of the genus Streptacidiphilus
Soon Dong Lee, Hong Lim Yang, In Seop Kim
International Journal of Systematic and Evolutionary Microbiology
.2025;[Epub] CrossRef - Brevibacterium litoralis sp. nov., a cellulose-degrading strain isolated from marine surface sediment
Quan Yang, Aolin Zhao, Haifei Liu, Jiawei Li, Shujing Wu, Ying Huang, Jie Weng, Mingguo Jiang, Yi Jiang
Antonie van Leeuwenhoek.2025;[Epub] CrossRef - Microbacterium rhizophilus sp. nov., an indole acetic acid-producing actinobacterium isolated from rhizosphere soil
Haifei Liu, Quan Yang, Jiawei Li, Lifang Yang, Aolin Zhao, Ying Huang, Hongcun Liu, Shujing Wu, Mingguo Jiang
Antonie van Leeuwenhoek.2025;[Epub] CrossRef - Roseobacter sinensis sp. nov., a marine bacterium capable to synthesize arachidonic acid
Hong-Chuan Wang, Meng-Han Huang, Dan-Yuan Guo, Wen-Li Liu, Zi-Wen Yang, Dao-Feng Zhang, Wen-Jun Li
Antonie van Leeuwenhoek.2025;[Epub] CrossRef - Comprehensive genomic and phenotypic characterization of thermophilic bacterium Sinimarinibacterium thermocellulolyticum sp. nov. HSW-8T, a cellulase-producing bacterium isolated from hot spring water in South Korea
Yue Jiang, Zhun Li
Antonie van Leeuwenhoek.2025;[Epub] CrossRef - Mesorhizobium salmacidum sp. nov. and Mesorhizobium argentiipisi sp. nov. are symbionts of the dry-land forage legumes Lessertia diffusa and Calobota sericea
Esther K. Muema, Melandré van Lill, Stephanus N. Venter, Wai Yin Chan, Ricu Claassens, Emma T. Steenkamp
Antonie van Leeuwenhoek.2025;[Epub] CrossRef -
Tetrameric PilZ protein stabilizes stator ring in complex flagellar motor and is required for motility in
Campylobacter jejuni
Yuanyuan Chen, Shoichi Tachiyama, Yuqian Li, Xueyin Feng, Hang Zhao, Yanmin Wu, Yu Guo, María Lara-Tejero, Canfeng Hua, Jun Liu, Beile Gao
Proceedings of the National Academy of Sciences.2025;[Epub] CrossRef - Proposal of Lactococcus intestinalis Sun et al. 2024 as a Later Heterotypic Synonym of Lactococcus muris Afrizal et al. 2023
Xin-Yu Zhu, Chun Tao Gu
Current Microbiology.2025;[Epub] CrossRef - Isolation and characterization of a novel lytic phage K14-2 infecting diverse species of the genus Klebsiella and Raoultella
Seomin Kang, Jeong-Eun Han, Young-Sik Choi, In-Chul Jeong, Jin-Woo Bae
Frontiers in Microbiology.2025;[Epub] CrossRef - Jannaschia ovalis sp. nov., a marine bacterium isolated from a tidal flat sediment in the Republic of Korea
Dae Young Kwon, Sang Hyun Lee, Jong Seong Khim, Xiaoyue Xu, Bogun Kim, In-Geol Choi, Yeonjae Yoo, Jae-Jin Kim
Antonie van Leeuwenhoek.2025;[Epub] CrossRef - Erwinia aeris sp. nov., A Novel Bacterium Isolated from the Surface of an Ore in Hubei Province, China
He-Bao Guo, Hong-Tu Zhu, Yi-Fan Zhang, Fu Yang, Xiao-Tong Ma, Shi-Gui Li, Hai-Lei Wei, Xiao-Xia Zhang
Current Microbiology.2025;[Epub] CrossRef - Assessing hydrocarbon degradation capacity of Isoptericola peretonis sp. nov. and related species: a comparative study
Àngela Vidal-Verdú, Adriel Latorre-Pérez, Javier Pascual, Ruth Mañes-Collado, Aitana Nevot-Terraes, Manuel Porcar
Frontiers in Microbiology.2025;[Epub] CrossRef - Unveiling root nodulation in Tribulus terrestris and Roystonea regia via metagenomics analysis
Saleh Rahimlou, Mahdieh S. Hosseyni Moghadam, Romina Gazis, Elena Karlsen-Ayala, Mohammad Bahram, Timothy Y. James, Leho Tedersoo
Molecular Genetics and Genomics.2025;[Epub] CrossRef -
Methylobacterium litchii sp. nov., Methylobacterium guangdongense sp. nov. and Methylorubrum subtropicum sp. nov., isolated from the phyllosphere of litchi
Ruifeng Gao, Jiali Li, Huaping Li, Xinqiang Xie, Guang-Da Feng, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology
.2025;[Epub] CrossRef -
Aquibaculum arenosum gen. nov., sp. nov., a novel member of the family Rhodovibrionaceae, isolated from sea sand
Soyeon Ahn, David Hyung-Sun Choi, Veeraya Weerawongwiwat, Jong-Hwa Kim, Ampaitip Sukhoom, Wonyong Kim
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - The analysis of complete genome sequence and comparative genomics of Vibrio parahaemolyticus LF1113 in Hainan
Linlin Hu, Aiyun Meng, Zhigang Tu, Shuwen Jia, Qingming Liu, Fuxiao Chen
Infection, Genetics and Evolution.2024; 119: 105574. CrossRef - Organic matter degradation in the deep, sulfidic waters of the Black Sea: insights into the ecophysiology of novel anaerobic bacteria
Subhash Yadav, Michel Koenen, Nicole J. Bale, Wietse Reitsma, Julia C. Engelmann, Kremena Stefanova, Jaap S. Sinninghe Damsté, Laura Villanueva
Microbiome.2024;[Epub] CrossRef - Extremely oligotrophic and complex-carbon-degrading microaerobic bacteria from Arabian Sea oxygen minimum zone sediments
Jagannath Sarkar, Mahamadul Mondal, Sabyasachi Bhattacharya, Subhajit Dutta, Sumit Chatterjee, Nibendu Mondal, Saran N, Aditya Peketi, Aninda Mazumdar, Wriddhiman Ghosh
Archives of Microbiology.2024;[Epub] CrossRef - Brooklawnia propionicigenes sp. nov., a facultatively anaerobic, propionate-producing bacterium isolated from a methanogenic reactor treating waste from cattle farms
Yasumitsu Akita, Atsuko Ueki, Akio Tonouchi, Yoshimichi Sugawara, Sachi Honma, Nobuo Kaku, Katsuji Ueki
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Reclassification of Aestuariicella albida as Pseudomaricurvus albidus comb. nov. and Aestuariicella hydrocarbonica as Pseudomaricurvus hydrocarbonicus comb. nov. Based on Comparative Genomics and Molecular Synapomorphies
Jake Adolf V. Montecillo, Merell P. Billacura, Maria Distressa G. Billacura
Current Microbiology.2024;[Epub] CrossRef - Advancements in prokaryotic systematics and the role of Bergey's International Society for Microbial Systematicsin addressing challenges in the meta-data era
Jian-Yu Jiao, Rashidin Abdugheni, Dao-Feng Zhang, Iftikhar Ahmed, Mukhtiar Ali, Maria Chuvochina, Svetlana N Dedysh, Xiuzhu Dong, Markus Göker, Brian P Hedlund, Philip Hugenholtz, Kamlesh Jangid, Shuang-Jiang Liu, Edward R B Moore, Manik Prabhu Narsing Ra
National Science Review.2024;[Epub] CrossRef - Terrirubrum flagellatum gen. nov., sp. nov. of Terrirubraceae fam. nov. and Lichenibacterium dinghuense sp. nov. from forest soil and proposal of Rhodoblastaceae fam. nov.
Xiu-yin Guo, Qiu-mei Zhang, Jia-cheng Fu, Li-hong Qiu
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef -
Shewanella goraebulensis sp. nov., isolated from sea water
Yong-Suk Lee, Hae-Rin Jeong, Eun-Jung Hwang, Maheshkumar Prakash Patil, Yong Bae Seo, Gun-Do Kim
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef -
Acidovorax benzenivorans sp. nov., a novel aromatic hydrocarbon-degrading bacterium isolated from a xylene-degrading enrichment culture
Anna Bedics, András Táncsics, Sinchan Banerjee, Erika Tóth, Péter Harkai, Gerda Georgina Gottschall, Károly Bóka, Balázs Kriszt
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Halosquirtibacter laminarini gen. nov., sp. nov. and Halosquirtibacter xylanolyticus sp. nov., marine anaerobic laminarin and xylan degraders in the phylum Bacteroidota
Tra T. H. Nguyen, Tien Q. Vuong, Ho Le Han, Song-Gun Kim
Scientific Reports.2024;[Epub] CrossRef - Improving plant salt tolerance through Algoriphagus halophytocola sp. nov., isolated from the halophyte Salicornia europaea
Yuxin Peng, Dong Hyun Cho, Zalfa Humaira, Yu Lim Park, Ki Hyun Kim, Cha Young Kim, Jiyoung Lee
Frontiers in Microbiology.2024;[Epub] CrossRef -
Microbacterium abyssi sp. nov. and Microbacterium limosum sp. nov., two new species of the genus Microbacterium, isolated from deep-sea sediment samples
Yihan Ding, Xiaorui Ding, Yiting Chen, Shiping Wei, Gaiyun Zhang
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Terrihabitans rhizophilus sp. nov., isolated from the rhizosphere soil of plant in temperate semi-arid steppe
Runze Bao, Huiling Guo, Yungang Liang, Kai Tang, Fuying Feng, Jianyu Meng
Antonie van Leeuwenhoek.2024;[Epub] CrossRef - Fictibacillus fluitans sp. nov., isolated from freshwater pond
Amit Yadav, Akanksha Maurya, Yash Bhavsar, Ruchi Teware, Agrima Bhatt, Elaine DaCosta, Vipool Thorat, Kiran Kirdat, Syed G. Dastager
Archives of Microbiology.2024;[Epub] CrossRef - Microbial acidification by N, S, Fe and Mn oxidation as a key mechanism for deterioration of subsea tunnel sprayed concrete
Sabina Karačić, Carolina Suarez, Per Hagelia, Frank Persson, Oskar Modin, Paula Dalcin Martins, Britt-Marie Wilén
Scientific Reports.2024;[Epub] CrossRef -
Xanthomonas rydalmerensis sp. nov., a non-pathogenic member of Group 1 Xanthomonas
Daniel J. E. McKnight, Johanna Wong-Bajracharya, Efenaide B. Okoh, Fridtjof Snijders, Fiona Lidbetter, John Webster, Mathew Haughton, Aaron E. Darling, Steven P. Djordjevic, Daniel R. Bogema, Toni A. Chapman
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Adaptation mechanisms of Alcanivorax facilitating its predominance in marine environments
Zhen Chen, Shizheng Xiang, Yao Lu, Qiliang Lai, Chunming Dong, Jianyang Li, Guizhen Li, Zongze Shao
Frontiers in Marine Science.2024;[Epub] CrossRef - Genomic Functional Analysis of Novel Radiation-Resistant Species of Knollia sp. nov. S7-12T from the North Slope of Mount Everest
Xinyue Wang, Yang Liu, Zhiyuan Chen, Kexin Wang, Guangxiu Liu, Tuo Chen, Binglin Zhang
Microorganisms.2024; 12(9): 1748. CrossRef -
Massilia litorea sp. nov., Marinobacter salinisoli sp. nov. and Rhodobacter xanthinilyticus sp. nov., isolated from coastal environments
Banseok Lee, Donghoon Shin, Juseong Kim, Su-Kyoung Shin, Hana Yi, Min-gyung Baek
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Unveiling unique microbial nitrogen cycling and nitrification driver in coastal Antarctica
Ping Han, Xiufeng Tang, Hanna Koch, Xiyang Dong, Lijun Hou, Danhe Wang, Qian Zhao, Zhe Li, Min Liu, Sebastian Lücker, Guitao Shi
Nature Communications.2024;[Epub] CrossRef - Auxin production and plant growth promotion by Microbacterium albopurpureum sp. nov. from the rhizoplane of leafless Chiloschista parishii Seidenf. orchid
Elena A. Tsavkelova, Elena A. Volynchikova, Natalia V. Potekhina, Konstantin V. Lavrov, Alexander N. Avtukh
Frontiers in Plant Science.2024;[Epub] CrossRef -
Paenibacillus suaedae sp. nov. and Paenibacillus violae sp. nov., isolated from the roots of Suaeda japonica Makino and Viola mandshurica W. Becker with plant growth-promoting potential
Inhyup Kim, Sunho Park, Yonghee Jung, Haejin Woo, Hyunji Lee, Subin Yook, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef -
Vagococcus jeotgali sp. nov., isolated from cutlassfish jeotgal, a traditional Korean fermented seafood
Sung-Hong Joe, Ah-In Yang, Bora Kim, Hae-In Joe, Yeongjin Hong, Na-Ri Shin
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef -
Sphingomonas rustica sp. nov. and Sphingomonas agrestis sp. nov., novel carotenoid-producing bacterial species isolated from farm soil
Hyunji Lee, Inhyup Kim, Sunho Park, Haejin Woo, Subin Yook, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Lapidilactobacillus salsurivasis sp. nov., Secundilactobacillus muriivasis sp. nov., and Streptococcus parasalivarius sp. nov., isolated from Traditional Chinese Pickle
Ting-Yu Wang, Chun Yan Li, Hao Wang, Chun Tao Gu
Current Microbiology.2024;[Epub] CrossRef -
Unprecedented N
2
O production by nitrate-ammonifying
Geobacteraceae
with distinctive N
2
O isotopocule signatures
Zhenxing Xu, Shohei Hattori, Yoko Masuda, Sakae Toyoda, Keisuke Koba, Pei Yu, Naohiro Yoshida, Zong-Jun Du, Keishi Senoo, Derek R. Lovley, Daniel R Bond
mBio.2024;[Epub] CrossRef -
Pseudomonas hefeiensis sp. nov., isolated from the rhizosphere of multiple cash crops in China
Kaiji Liao, Qiang Li, Jun-Zhou Li, Hai-Lei Wei
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef -
Speluncibacter jeojiensis gen. nov. sp. nov., a novel bacterium of the order Mycobacteriales isolated from a cave and a proposal of Speluncibacteraceae fam. nov.
Soon Dong Lee, Hong-Lim Yang, Jong-Heon Han, In Seop Kim
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - A rare urinary tract infection of multidrug-resistant Chryseobacterium urinae sp. nov. isolated from a diabetic, non-catheterized patient
Agrima Bhatt, Sujata Pujari, Shailesh Mantri, Kiran Kirdat, Lucky Thakkar, Reshma Poojary, Sunil Kuyare, Kritika Patil, Amit Yadav
Archives of Microbiology.2024;[Epub] CrossRef - Roseihalotalea indica gen. nov., sp. nov., a halophilic Bacteroidetes from mesopelagic Southwest Indian Ocean with higher carbohydrate metabolic potential
Beihan Chen, Mingzhe Zhang, Dan Lin, Jianing Ye, Kai Tang
Antonie van Leeuwenhoek.2024;[Epub] CrossRef - Phytopathogenic Curtobacterium flaccumfaciens Strains Circulating on Leguminous Plants, Alternative Hosts and Weeds in Russia
Anna D. Tokmakova, Rashit I. Tarakanov, Anna A. Lukianova, Peter V. Evseev, Lyubov V. Dorofeeva, Alexander N. Ignatov, Fevzi S.-U. Dzhalilov, Sergei A. Subbotin, Konstantin A. Miroshnikov
Plants.2024; 13(5): 667. CrossRef - Genomic and functional insights of a mucin foraging Rhodopirellula halodulae sp. nov.
PK Sreya, Atham Hari Naga Papa Rao, Gandham Suresh, Chintalapati Sasikala, Chintalapati Venkata Ramana
Systematic and Applied Microbiology.2024; 47(4): 126523. CrossRef -
Dyadobacter helix sp. nov. and Dyadobacter linearis sp. nov., from drinking water
Teresa Lucena, María J. Pujalte, David R. Arahal
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Preliminary comparative genomics analysis among Corynebacterium kroppenstedtii complex necessitates a reassessment of precise species associated with mastitis
Ying Huang, Ming-Hui Song, Shun-Guang Li, Hong- Yu Shen, Ping-Hua Qu, Dao-Feng Zhang
Journal of Applied Microbiology.2024;[Epub] CrossRef -
Ruicaihuangia caeni gen. nov., sp. nov., a novel taxon within the family Microbacteriaceae isolated from sludge
Le Liu, Keke Geng, Yu Lv, Qi Zhang, Gang Chen, Dan Cheng, Jiahui Shao, Jian He, Qirong Shen
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Isolation and characterization of two new species, Hymenobacter mellowenesis sp. nov. and Hymenobacter aranciens sp. nov., from soil
Seonjae Kim, Sathiyaraj Srinivasan, Myung Kyum Kim
Archives of Microbiology.2024;[Epub] CrossRef - Characteristics of a lipase ArEstA with lytic activity against drug-resistant pathogen from a novel myxobacterium, Archangium lipolyticum sp. nov.
Yang Zhou, Haixin Chen, Hongxia Jiang, Qing Yao, Honghui Zhu
Frontiers in Microbiology.2024;[Epub] CrossRef -
Lineage-specific evolution of
Aquibium
, a close relative of
Mesorhizobium
, during habitat adaptation
Minkyung Kim, Wonjae Kim, Yerim Park, Jaejoon Jung, Woojun Park, Arpita Bose
Applied and Environmental Microbiology.2024;[Epub] CrossRef - Speciation Features of Ferdinandcohnia quinoae sp. nov to Adapt to the Plant Host
Zaki Saati-Santamaría, José David Flores-Félix, José M. Igual, Encarna Velázquez, Paula García-Fraile, Eustoquio Martínez-Molina
Journal of Molecular Evolution.2024; 92(2): 169. CrossRef - Novel microbiota Mesosutterella faecium sp. nov. has a protective effect against inflammatory bowel disease
Seung Yeob Yu, Byeong Seob Oh, Seoung Woo Ryu, Jeong Eun Bak, Eun Seo Heo, Jeong Chan Moon, Jae-Ho Jeong, Ju Huck Lee
Frontiers in Microbiology.2024;[Epub] CrossRef - Isoptericola haloaureus sp. nov., a dimorphic actinobacterium isolated from mangrove sediments of southeast India, implicating biosaline agricultural significance through nitrogen fixation and salt tolerance genes
Munisamy Prathaban, Ragothaman Prathiviraj, Mythili Ravichandran, Sharmila Devi Natarajan, Murugesan Sobanaa, S. Hari Krishna Kumar, Varadharaju Chandrasekar, Joseph Selvin
Antonie van Leeuwenhoek.2024;[Epub] CrossRef - Isolation and Characterization of Paracoccus maritimus sp. nov., from Intertidal Sediment
Libo Yu, Guangxin Xu, Shiping Wei, Qiliang Lai, Zongze Shao
Current Microbiology.2024;[Epub] CrossRef -
Gilvirhabdus luticola gen. nov., sp. nov., a mesophilic and halophilic bacterium isolated from tidal flat sediment
Jaincy N. Jayan, Hee-Su Kim, Sathiyaraj Srinivasan, Hyung-Seop Kim, Jae-Yon Yu, Sang-Seob Lee
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Leuconostoc koreense sp. nov., isolated from kimchi, a fermented vegetable
Min Ji Lee, Jeong Ui Yun, Sohee Nam, Mi-Ja Jung, Yeon Bee Kim, Yujin Kim, Jisu Lee, Dae Gyu Choi, Dae Seung Lee, Seong Woon Roh, Tae Woong Whon, Che Ok Jeon, Se Hee Lee
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Aerobic anoxygenic phototrophs play important roles in nutrient cycling within cyanobacterial Microcystis bloom microbiomes
Haiyuan Cai, Christopher J. McLimans, Helong Jiang, Feng Chen, Lee R. Krumholz, K. David Hambright
Microbiome.2024;[Epub] CrossRef -
Arthrobacter horti sp. nov., isolated from mountain soil
Mingyeong Park, Jaisoo Kim
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Sphingomicrobium clamense sp. nov., Isolated from Sediment of Clam Island Beach in China
Xing Li, Lulu Mu, Yanfeng Zhang, Zimu Zhu, Yazhong Xiao, Zemin Fang
Current Microbiology.2024;[Epub] CrossRef -
Pseudomonas fortuita sp. nov., isolated from the endosphere of a wild yam
Aurelien Carlier, Marine Beaumel, Sandra Moreau, Tessa Acar, Thibault Géry Sana, Margo Cnockaert, Peter Vandamme
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef -
Azospirillum isscasi sp. nov., a bacterium isolated from rhizosphere soil of rice
Hui Wang, Haiyang Jin, Zhe Chen, Wenjun Li, Jing Ma, Tianlong Hu, Qi Liu, Yanhui Zhang, Xingwu Lin, Zubin Xie
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Genome Mining Analysis Uncovers the Previously Unknown Biosynthetic Capacity for Secondary Metabolites in Verrucomicrobia
Xue Di, Peng Li, Jingxuan Wang, Vincent Nowak, Shuai Zhi, Meiling Jin, Liwei Liu, Shan He
Marine Biotechnology.2024; 26(6): 1324. CrossRef - Metabolic and phylogenetic diversity in the phylum Nitrospinota revealed by comparative genome analyses
Linnea F M Kop, Hanna Koch, Mike S M Jetten, Holger Daims, Sebastian Lücker
ISME Communications.2024;[Epub] CrossRef - Key bacteria decomposing animal and plant detritus in deep sea revealed via long-term in situ incubation in different oceanic areas
Jianyang Li, Chunming Dong, Shizheng Xiang, Huiyang Wei, Qiliang Lai, Guangshan Wei, Linfeng Gong, Zhaobin Huang, Donghui Zhou, Guangyi Wang, Zongze Shao
ISME Communications.2024;[Epub] CrossRef - Xiashengella succiniciproducens gen. nov., sp. nov., a succinate-producing bacterium isolated from an anaerobic digestion tank in the family Marinilabiliaceae of the order Bacteroidales
Hao-Jie Huang, Xi Zhang, Xin-Wei Sun, Biao Chen, Xiu-Tong Li, Nan Zhou, Rashidin Abdugheni, Qiu-Yin Cheng, Tie-Jun Zhang, Yao Liu, Yong Jiang, Ye Deng, Shuang-Jiang Liu, Cheng-Ying Jiang
Archives of Microbiology.2024;[Epub] CrossRef - Comparative genome analysis of the genus Marivirga and proposal of two novel marine species: Marivirga arenosa sp. nov., and Marivirga salinae sp. nov.
Neak Muhammad, Forbes Avila, Song-Gun Kim
BMC Microbiology.2024;[Epub] CrossRef -
Lacticaseibacillus pabuli sp. nov., isolated from fermented cattle feed
Hyorim Choi, Yiseul Kim, Seunghwan Kim, Soon-Wo Kwon, Daseul Lee, Byeong-Hak Han, Seung-Beom Hong, Hanako Naito, Tomomi Yamada, Moriyuki Hamada, Jun Heo
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Resolving the metabolism of monolignols and other lignin-related aromatic compounds in Xanthomonas citri
Damaris B. Martim, Anna J. V. C. Brilhante, Augusto R. Lima, Douglas A. A. Paixão, Joaquim Martins-Junior, Fernanda M. Kashiwagi, Lucia D. Wolf, Mariany S. Costa, Fabrícia F. Menezes, Rafaela Prata, Matheus C. Gazolla, Juliana A. Aricetti, Gabriela F. Per
Nature Communications.2024;[Epub] CrossRef - Pedobacter rhodius sp. nov. and Pedobacter punctiformis sp. nov., isolated from soil
Haejin Woo, Geeta Chhetri, Inhyup Kim, Yoonseop So, Sunho Park, Yonghee Jung, Taegun Seo
Antonie van Leeuwenhoek.2024;[Epub] CrossRef - A comparative genomic study of a hydrocarbon-degrading marine bacterial consortium
Jorge Rojas-Vargas, Eria A. Rebollar, Alejandro Sanchez-Flores, Liliana Pardo-López, Pankaj Kumar Arora
PLOS ONE.2024; 19(8): e0303363. CrossRef -
Gemmobacter denitrificans sp. nov., a denitrifying bacterium, isolated from pond water for Litopenaeus vannamei
Mingxia Zhang, Yulian Zhang, Fan Yang, Qing Yao, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef -
Janibacter alittae sp. nov., an actinobacterium isolated from the gut of marine sandworm (Alitta virens)
Bora Kim, Min Ok Jun, Ah-In Yang, Sung-Hong Joe, Hae-In Joe, Hojun Sung, Ki Hyun Kim, Hyun Jung Kim, Na-Ri Shin
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Sporosarcina jeotgali sp. nov., Sporosarcina oncorhynchi sp. nov., and Sporosarcina trichiuri sp. nov., Isolated from Jeotgal, a Traditional Korean Fermented Seafood
Ah-In Yang, Bora Kim, Sung-Hong Joe, Hae-In Joe, Hanna Choe, Ki Hyun Kim, Min Ok Jun, Na-Ri Shin
Journal of Microbiology.2024; 62(4): 285. CrossRef - Characterization of Bacillus velezensis TJS119 and its biocontrol potential against insect pathogens
Kook-Il Han, Young Ho Nam, Byung Su Hwang, Jeong Tae Kim, Jum Oc Jung, Eunsun Kim, Mi-Hwa Lee
Frontiers in Microbiology.2024;[Epub] CrossRef - Altererythrobacter litoralis sp. nov., a New Carotenoid-Producing Member of the Family Erythrobacteraceae, Isolated from a Tidal Flat Sediment
Yang Liu, Tao Pei, Juan Du, Mingxia Zhang, Honghui Zhu
Current Microbiology.2024;[Epub] CrossRef -
Pengzhenrongella frigida sp. nov., isolated from a glacier
Qing Liu, Lei-Lei Yang, Yu-Hua Xin
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef -
Isolation and identification of uric acid-dependent
Aciduricibacillus chroicocephali
gen. nov., sp. nov. from seagull feces and implications for hyperuricemia treatment
Wenxuan Liu, Fulong Nan, Fengjun Liu, Xiaoli Yang, Zonghui Li, Shasha Jiang, Xianjuan Zhang, Jun Li, Meng Yu, Yunyang Wang, Bin Wang, Vincent B. Young
mSphere.2024;[Epub] CrossRef - Ciceribacter sichuanensis sp. nov., a plant growth promoting rhizobacterium isolated from root nodules of soybean in Sichuan, China
Yanqin Zhang, Yuanxue Chen, Petri Penttinen, Xing Wang, Ying Quan, Licheng Wen, Miao Yang, Xiaoping Zhang, Qiang Chen, Lingzi Zhang, Junjie Zhang, Xiaoxia Zhang, Kaiwei Xu
Antonie van Leeuwenhoek.2024;[Epub] CrossRef -
Clostridium lapidicellarium sp. nov. and Clostridium moutaii sp. nov., two species isolated from fermentation cellar-producing sauce-flavour Chinese baijiu
Fan Yang, Hui Wang, Liang-Qiang Chen, Nan Zhou, Jian-Jun Lu, Xiu-Xin Pu, Bo Wan, Li Wang, Shuang-Jiang Liu
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef -
Paracoccus actinidiae sp.nov., a novel bacterium isolated from kiwi tree rhizosphere soil
Chenqi Xu, Han Peng, He Li, Xinran Xie, Siwei Chen, Junhao Dai, Hong Ren
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - The Type Strain of Bifidobacterium indicum Scardovi and Trovatelli 1969 (Approved Lists 1980) is ATCC 25912, not DSM 20214, and Rejection to Reclassify Bifidobacterium coryneforme as Bifidobacterium indicum
Cheng-Shan Jiang, Chun Yan Li, Chun Tao Gu
Current Microbiology.2024;[Epub] CrossRef -
Actinomadura monticuli sp. nov., isolated from Darangshi Oreum (a volcanic cone), and the reclassification of Actinomadura glauciflava Lu et al. 2003 as a later heterotypic synonym of Actinomadura luteofluorescens (Shinobu 1962) Preobrazhensk
Soon Dong Lee, Hong Lim Yang, In Seop Kim
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Streptococcus taoyuanensis sp. nov., a Novel Species Isolated from a Patient with Bacteremia
Chien-Yu Lee, Chin-Kan Chan, Yi-Sheng Chen, Yun-Shien Lee, Shih-Ting Lin, Yu-Chung Chang, Hui-Chung Wu, Jia-rong Zhang, Hong-yu Chen, Li-Ting Wang
Current Microbiology.2024;[Epub] CrossRef - Difference in gut microbial dysbiotic patterns between body-first and brain-first Parkinson's disease
Don Gueu Park, Woorim Kang, In-Ja Shin, Mauricio Chalita, Hyun-Seok Oh, Dong-Wook Hyun, Hyun Kim, Jongsik Chun, Young-Sil An, Eun Jeong Lee, Jung Han Yoon
Neurobiology of Disease.2024; 201: 106655. CrossRef -
Acidithiobacillus acidisediminis sp. nov., an acidophilic sulphur-oxidizing chemolithotroph isolated from acid mine drainage sediment
Xiu-Tong Li, Zong-Lin Liang, Ye Huang, Zhen Jiang, Zhen-Ni Yang, Nan Zhou, Ying Liu, Shuang-Jiang Liu, Cheng-Ying Jiang
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Sphingomonas Immobilis sp. nov., and Sphingomonas natans sp. nov. bacteria isolated from soil
Inyoung Choi, Sathiyaraj Srinivasan, Myung Kyum Kim
Archives of Microbiology.2024;[Epub] CrossRef - Roseateles agri sp. nov., a New Species Isolated from Fresh Soil in Uiwang, South Korea
Yelim You, Jaisoo Kim
Diversity.2024; 16(5): 279. CrossRef - Description of Roseibium sediminicola sp. nov. Isolated from Sediment of a Tidal Flat on the Yellow Sea Coast
Soyeon Ahn, Veeraya Weerawongwiwat, Yunjeong Lee, David Hyung-Sun Choi, Jong-Hwa Kim, Jung-Hoon Yoon, Jung-Sook Lee, Ampaitip Sukhoom, Wonyong Kim
Current Microbiology.2024;[Epub] CrossRef - Chemolithoautotrophic diazotrophs dominate dark nitrogen fixation in mangrove sediments
Shasha Wang, Lijing Jiang, Zhuoming Zhao, Zhen Chen, Jun Wang, Karine Alain, Liang Cui, Yangsheng Zhong, Yongyi Peng, Qiliang Lai, Xiyang Dong, Zongze Shao
The ISME Journal.2024;[Epub] CrossRef -
Fontisubflavum oceani gen. nov., sp. nov., isolated from the deep-sea cold seep water of South China Sea
Xiu-dan Xu, Dan-dan Zhou, Bin-zhe Zhang, Jian Zhang
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef -
Paenibacillus glufosinatiresistens sp. nov., a glufosinate-resistant bacterium isolated from sludge
Yan Wu, Yuwen Yang, Minglai Wan, Le Chen, Ye Yuan, Jian He, Baolong Zhang
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef -
Erythrobacter oryzae sp. nov., isolated from rice paddy soil
Hyo-Jin Lee, Ji-Soo Hwang, Eun-kyung Lee, Kyung-Sook Whang
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - SeqCode facilitates naming of South African rhizobia left in limbo
Melandré van Lill, Stephanus N. Venter, Esther K. Muema, Marike Palmer, Wai Y. Chan, Chrizelle W. Beukes, Emma T. Steenkamp
Systematic and Applied Microbiology.2024; 47(2-3): 126504. CrossRef - A Novel Strain Burkholderia theae GS2Y Exhibits Strong Biocontrol Potential Against Fungal Diseases in Tea Plants (Camellia sinensis)
Yijie Dong, Xing Wang, Guang-Da Feng, Qing Yao, Honghui Zhu
Cells.2024; 13(21): 1768. CrossRef - Clostridium omnivorum sp. nov., isolated from anoxic soil under the treatment of reductive soil disinfestation
Atsuko Ueki, Akio Tonouchi, Nobuo Kaku, Sachi Honma, Katsuji Ueki
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Alkalimonas mucilaginosa sp. nov. and Alkalimonas cellulosilytica sp. nov. isolated from alkaline Lonar lake, India
Sonia Thite, Devika Godbole, Mahima Debnath, Agrima Bhatt, Amit Yadav, Tushar Lodha, Neetha Joseph, Kiran Kirdat, Dibyajyoti Boruah, Roohani Sharma, Amaraja Joshi
Antonie van Leeuwenhoek.2024;[Epub] CrossRef - Genome-based taxonomic classification of the genus Sulfitobacter along with the proposal of a new genus Parasulfitobacter gen. nov. and exploring the gene clusters associated with sulfur oxidation
Xiaokun Xu, Mengdan He, Qingjie Xue, Xiuzhen Li, Ang Liu
BMC Genomics.2024;[Epub] CrossRef -
Aurantiacibacter flavus sp. nov. and Aurantiacibacter gilvus sp. nov., isolated from the mudflat of Suaeda japonica colonies
Sunho Park, Inhyup Kim, Haejin Woo, Hyunji Lee, Subin Yook, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Ochrobactrum chromiisoli sp. nov., Isolated from Chromium-Contaminated Soil
Yi Yang, Zhe Xu, Li Yang, Meng-yao Hu, Guang-yang Jiang, Jia Chen, Yi-chen Yang, Yongqiang Tian
Current Microbiology.2024;[Epub] CrossRef - Thiosulfate oxidation and autotrophy potential by marine prevalent heterotrophic bacteria of genus Marinobacter
Fei Xu, Xiang Zeng, Yadong Gong, Zongze Shao
Acta Oceanologica Sinica.2024; 43(8): 89. CrossRef -
Lacticaseibacillus parahuelsenbergensis sp. nov., Lacticaseibacillus styriensis sp. nov. and Lacticaseibacillus zeae subsp. silagei subsp. nov., isolated from different grass and corn silage
Monika Grabner F., Monika Grabner H., Hermine Schein, Andrea Schrank, Manuela Töglhofer, Elisabeth Weidenholzer, Christian Rückert-Reed, Tobias Busche, Marlene Buchebner-Jance
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Draft genome sequence of 'Candidatus Phytoplasma asteris,’ strain SW86 associated with sandal spike disease (SSD)
Kiran Kirdat, Bhavesh Tiwarekar, K. N. Manjula, S. Padma, Shivaji Sathe, R. Sundararaj, Amit Yadav
3 Biotech.2024;[Epub] CrossRef - Cold-adapted Exiguobacterium sibiricum K1 as a potential bioinoculant in cold regions: Physiological and genomic elucidation of biocontrol and plant growth promotion
Sareeka Kumari, Anil Kumar, Ayush Lepcha, Rakshak Kumar
Gene.2024; 916: 148439. CrossRef - EcoGenoRisk: Developing a computational ecological risk assessment tool for synthetic biology
Anna Ulanova, Cresten Mansfeldt
Environmental Pollution.2024; 346: 123647. CrossRef - Description of Aliirhizobium terrae sp. nov., A Plant Growth-Promoting Bacterium Isolated from a Maize-Rice Rotation Agriculture Field
Shih-Yao Lin, Tzu-Yu Lin, Asif Hameed, Chia-Fang Tsai, Chiu-Chung Young
Current Microbiology.2024;[Epub] CrossRef - Novel oceanic cyanobacterium isolated from Bangaram island with profound acid neutralizing ability is proposed as Leptolyngbya iicbica sp. nov. strain LK
Subhajeet Dutta, Shreya Kothari, Deeksha Singh, Samrat Ghosh, Aditya Narayan Sarangi, Smruti Sanjita Behera, Satish Prajapati, Prasanta Kumar Sinha, Asharani Prusty, Sucheta Tripathy
Molecular Phylogenetics and Evolution.2024; 197: 108092. CrossRef - Sulfide Toxicity as Key Control on Anaerobic Oxidation of Methane in Eutrophic Coastal Sediments
Paula Dalcin Martins, João P. R. C. de Monlevad, Maider J. Echeveste Medrano, Wytze Klaas Lenstra, Anna Julia Wallenius, Martijn Hermans, Caroline P. Slomp, Cornelia Ulrike Welte, Mike S. M. Jetten, Niels A. G. M. van Helmond
Environmental Science & Technology.2024; 58(26): 11421. CrossRef - Phylogeny and genomic analysis of Shewanella cutis sp. nov., isolated from freshwater pufferfish
Lipika Das, Ritu Rani Archana Kujur, Tanmoy Debnath, Subrata K. Das
Folia Microbiologica.2024; 69(4): 723. CrossRef -
Aequorivita flava sp. nov., isolated from deep-sea sediments
Xiangwei Chen, Jinmei Xia, Xiaoteng Fu, Qiliang Lai, Jianning Wang, Yaping Du, Xiupian Liu, Guangyu Li, Xixiang Tang, Zongze Shao
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Paraflavitalea pollutisoli sp. nov., Pollutibacter soli gen. nov. sp. nov., Polluticoccus soli gen. nov. sp. nov., and Terrimonas pollutisoli sp. nov., four new members of the family Chitinophagaceae from polluted soil
Ze-Shen Liu, Xiao-Kang Wang, Ke-Huan Wang, Mei-Ling Yang, De-Feng Li, Shuang-Jiang Liu
Systematic and Applied Microbiology.2024; 47(2-3): 126503. CrossRef -
Sinomonas terricola sp. nov., a plant-beneficial bacterium isolated from litchi rhizosphere soil in Guangdong, China
Jiaxin Wan, Yang Zhou, Hui Sun, Huaping Li, Qing Yao, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Genetic and phenotypic diversity of Flavobacterium psychrophilum isolates from Czech salmonid fish farms
Vera Vaibarova, Stanislava Kralova, Miroslava Palikova, Jana Schwarzerova, Julie Nejezchlebova, Darina Cejkova, Alois Cizek
BMC Microbiology.2024;[Epub] CrossRef -
Citrobacter enshiensis sp. nov., isolated from seleniferous soil
Sasa Zhang, Kui Li, Jing Peng, Haoyang Wang, Jiayin Sun, Yanbin Guo
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Distinct genome trichotomy in members of Hapalosiphonaceae is guided by habitat adaptation with Mastigocladus laminosus UU774 as a case study
Aribam Geeta, Mayuri Mukherjee, Bornita Das, Subhajeet Dutta, Asharani Prusty, Samrat Ghosh, Anashuya Biswas Raha, Mousumi Poddar Sarkar, Sucheta Tripathy
Algal Research.2024; 82: 103603. CrossRef - Microbacterium aquilitoris sp. nov. and Microbacterium gwkjiense sp. nov., isolated from beach
Soon Dong Lee, Hong Lim Yang, Ji-Sun Kim, In Seop Kim
Archives of Microbiology.2024;[Epub] CrossRef - Microvirga sesbaniae sp. nov. and Microvirga yunnanensis sp. nov., Pink-Pigmented Bacteria Isolated from Root Nodules of Sesbania cannabina (Retz.) Poir.
Nan Shi, Teng He, Huifang Qin, Ziye Wang, Shenghao You, Entao Wang, Guoli Hu, Fang Wang, Miao Yu, Xiaoyun Liu, Zhenyu Liu
Microorganisms.2024; 12(8): 1558. CrossRef -
Microbacterium horticulturae sp. nov., a novel actinobacterium isolated from flowerpot soil
Hyorim Choi, Yunhee Choi, Seunghwan Kim, Yiseul Kim, Hanako Naito, Tomomi Yamada, Moriyuki Hamada, NamJung Kim, Yonghoon Lee, Jun Heo
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Comparative genomics of the genus Halioglobus reveals the genetic basis for the reclassification of Halioglobus pacificus as Parahalioglobus pacificus gen. nov. comb. nov
Jake Adolf V. Montecillo
International Microbiology.2024; 27(6): 1831. CrossRef -
Paraburkholderia largidicola sp. nov., a gut symbiont of the bordered plant bug Physopelta gutta
Reona Yashima, Yuan Terata, Kaoru Sakamoto, Miho Watanabe, Kazutaka Takeshita
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef -
Sphingomonas longa sp. nov., Sphingomonas mollis sp. nov. and Sphingomonas aurea sp. nov.: three novel Sphingomonas species isolated from soil
Eo Jin Kim, Soo Hyun Maeng, Myung Kyum Kim
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Genomics of the Thermophilic Bacterium Thermosulfidibacter takaii Reveals Novel Lineage of Deep-Branching Bacterial Phylum
Jake Adolf V. Montecillo
Indian Journal of Microbiology.2024; 64(2): 762. CrossRef - Hyalangiumruber sp. nov, characterization of a novel myxobacterium strain s54d21 and their secondary metabolites
Yi Zang, Xianjiao Zhang, Zhe Wang, Qingyi Tong, Yang Zhou, Qing Yao, Honghui Zhu
Frontiers in Microbiology.2024;[Epub] CrossRef -
Achromobacter seleniivolatilans sp. nov. and Buttiauxella selenatireducens sp. nov., isolated from the rhizosphere of selenium hyperaccumulator Cardamine hupingshanesis
Sasa Zhang, Yi Liu, Hao Wang, Zhongnan Xu, Jing Peng, Qiaolin Xu, Kui Li, Haoyang Wang, Yanbin Guo
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Draft Genome Sequence Analyses of Two Novel Marinobacter suadae sp. nov. and Wenyingzhuangia gilva sp. nov. Isolated from the Root of Suaeda japonica Makino
Sunho Park, Inhyup Kim, Geeta Chhetri, Yonghee Jung, Haejin Woo, Taegun Seo
Life.2024; 14(3): 296. CrossRef - Unveiling three novel actinobacterial species (Streptomyces cavernicola sp. nov., Streptomyces solicavernae sp. nov. and Streptomyces luteolus sp. nov.) in soil samples in Phu Pha Phet Cave, Thailand
Nitcha Chamroensaksri, Supattra Muangham, Chanwit Suriyachadkun, Worawich Phornsiricharoenphant, Wongsakorn Phongsopitanun, Satinee Suetrong, Somboon Tanasupawat
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef -
Cellulomonas alba sp. nov. and Cellulomonas edaphi sp. nov., isolated from wetland soils
Sunho Park, Inhyup Kim, Geeta Chhetri, Yonghee Jung, Haejin Woo, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef -
Microbacterium algihabitans sp. nov., Microbacterium phycohabitans sp. nov., and Microbacterium galbum sp. nov., isolated from dried beach seaweeds
Soon Dong Lee, Hong Lim Yang, In Seop Kim
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Bifidobacterium apicola sp. nov., isolated from the gut of honeybee (Apis mellifera)
Ting-Yu Wang, Hao Wang, Chun Tao Gu
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef -
Polaribacter ponticola sp. nov., isolated from seawater, reclassification of Polaribacter undariae as a later heterotypic synonym of Polaribacter sejongensis, and emended description of Polaribacter sejongensis Kim et al. 2013
Ju Hye Baek, Mahrukh Butt, Dong Min Han, Jeong Min Kim, Seohui Choi, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Description of Mycolicibacterium arenosum sp. nov. Isolated from Coastal Sand on the Yellow Sea Coast
Jiseon Jeong, Soyeon Ahn, Thoi Cong Truong, Jong-Hwa Kim, Veeraya Weerawongwiwat, Jung-Sook Lee, Jung-Hoon Yoon, Ampaitip Sukhoom, Wonyong Kim
Current Microbiology.2024;[Epub] CrossRef - Genome analysis deciphered Chryseobacterium indicum is a distinct species associated with freshwater pufferfish
Manish Prakash Victor, Ritu Rani Archana Kujur, Lipika Das, Subrata K. Das
Infection, Genetics and Evolution.2024; 118: 105561. CrossRef - Stable-isotope probing combined with amplicon sequencing and metagenomics identifies key bacterial benzene degraders under microaerobic conditions
András Táncsics, Anna Bedics, Sinchan Banerjee, André Soares, Erzsébet Baka, Alexander J. Probst, Balázs Kriszt
Biologia Futura.2024; 75(3): 301. CrossRef - Streptococcus taonis sp. nov., a novel bacterial species isolated from a blood culture of a patient
Chien-Yu Lee, Chin-Kan Chan, Momoko Chida, Mika Miyashita, Yun-Shien Lee, Hui-Chung Wu, Yu-Chung Chang, Wen-Ting Lin, Yi-Sheng Chen
Archives of Microbiology.2024;[Epub] CrossRef -
Shewanella phaeophyticola sp. nov. and Vibrio algarum sp. nov., isolated from marine brown algae
Mahrukh Butt, Jaejoon Jung, Jeong Min Kim, Hülya Bayburt, Dong Min Han, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Two Novel Bacterial Species, Rhodanobacter lycopersici sp. nov. and Rhodanobacter geophilus sp. nov., Isolated from the Rhizosphere of Solanum lycopersicum with Plant Growth-Promoting Traits
Haejin Woo, Inhyup Kim, Geeta Chhetri, Sunho Park, Hyunji Lee, Subin Yook, Taegun Seo
Microorganisms.2024; 12(11): 2227. CrossRef - Roseateles caseinilyticus sp. nov. and Roseateles cellulosilyticus sp. nov., isolated from rice paddy field soil
Yoonseop So, Geeta Chhetri, Inhyup Kim, Sunho Park, Yonghee Jung, Taegun Seo
Antonie van Leeuwenhoek.2024;[Epub] CrossRef - A Multilocus Sequence Typing Scheme for Rapid Identification of Xanthomonas citri Based on Whole-Genome Sequencing Data
Efenaide B. Okoh, Michael Payne, Ruiting Lan, Markus Riegler, Toni A. Chapman, Daniel R. Bogema
Phytopathology®.2024; 114(7): 1480. CrossRef - Taxonomic characterization of Sphaerotilus microaerophilus sp. nov., a sheath-forming microaerophilic bacterium of activated sludge origin
Shiori Narihara, Shun Chida, Naoki Matsunaga, Ryosuke Akimoto, Mizuki Akimoto, Aoi Hagio, Tomomi Mori, Tadashi Nittami, Michio Sato, Sehui Mun, Hyeonjin Kang, Ji Hwan Back, Minoru Takeda
Archives of Microbiology.2024;[Epub] CrossRef - Dietary quality and the gut microbiome in early-stage Parkinson’s disease patients
Hyun Jeong Yoon, Woorim Kang, Sungyang Jo, Yun Su Hwang, Je Hee Lee, Sun Ju Chung, Yoo Kyoung Park
Nutritional Neuroscience.2024; 27(7): 761. CrossRef - Shewanella youngdeokensis sp. nov. Isolated from Marine Sediment and Sea Water of East Sea in Republic of Korea
Y.-S. Lee, H.-R. Jeong, E.-J. Hwang, M. P. Patil, S. S. Choi, Y. B. Seo, G.-D. Kim
Microbiology.2024; 93(6): 737. CrossRef -
Methylomonas rivi sp. nov., Methylomonas rosea sp. nov., Methylomonas aurea sp. nov. and Methylomonas subterranea sp. nov., type I methane-oxidizing bacteria isolated from a freshwater creek and the deep terrestrial subsurface
Christopher A. Abin, Christopher T. Garner, Krithivasan Sankaranarayanan, Reid A. Sindelar, Kyrah F. Kotary, Rosa M. Garner, Samantha C. Barclay, Haiyuan Cai, Paul A. Lawson, Lee R. Krumholz
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef -
Lysobacter stagni sp. nov. and Limnohabitans lacus sp. nov., isolated from a pond
Yonghee Jung, Geeta Chhetri, Inhyup Kim, Yoonseop So, Sunho Park, Haejin Woo, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - EzBioCloud: a genome-driven database and platform for microbiome identification and discovery
Mauricio Chalita, Yeong Ouk Kim, Sein Park, Hyun-Seok Oh, Jae Hyoung Cho, Jeongsup Moon, Nuga Baek, Changsik Moon, Kihyun Lee, Junwon Yang, Gi Gyun Nam, Yeonjae Jung, Seong-In Na, Michael James Bailey, Jongsik Chun
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Description and genomic characterization of Cohnella caldifontis sp. nov., isolated from hot springs in Yunnan province, south-west China
Ming-Xian Xiang, Cui-Ping Miao, Dian-Yan Zhang, Juan Wang, Yi-Qing Li, Min Yin, ShuKun Tang
Antonie van Leeuwenhoek.2024;[Epub] CrossRef -
Chitiniphilus purpureus sp. nov., a novel chitin-degrading bacterium isolated from crawfish pond sediment
Kaiyang Li, Xiong Luo, Rongrong Fan, Zhuoran Ding, Shixue Zheng, Zhengjun Chen
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Phylogenomic analysis of metagenome-assembled genomes indicates new taxa in the order Spirochaetales and proposal of Thalassospirochaeta sargassi gen. nov. sp. nov. from seaweeds
Kohli Pragya, Pannikurungottu Sreya, Lakshmanan Vighnesh, Dhurka Mahima, Mallick Sushmita, Chintalapati Sasikala, Chintalapati Venkata Ramana
Systematic and Applied Microbiology.2024; 47(2-3): 126502. CrossRef - Update on the proposed minimal standards for the use of genome data for the taxonomy of prokaryotes
Raúl Riesco, Martha E. Trujillo
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Description of Fuscovulum ytuae sp. nov, a facultative autotroph isolated from the intertidalite of Yangma island, China
Bin-zhe Zhang, Xiu-dan Xu, Dan-dan Zhou, Xue-Peng Li, Xu-dong Jiao, Jian Zhang
Antonie van Leeuwenhoek.2024;[Epub] CrossRef - Phylogenomic analysis uncovers an unexpected capacity for the biosynthesis of secondary metabolites in Pseudoalteromonas
Jingxuan Wang, Peng Li, Xue Di, Hongmei Lu, Huamao Wei, Shuai Zhi, David P. Fewer, Shan He, Liwei Liu
European Journal of Medicinal Chemistry.2024; 279: 116840. CrossRef -
Roseateles subflavus sp. nov. and Roseateles aquae sp. nov., isolated from artificial pond water and Roseateles violae sp. nov., isolated from a Viola mandshurica root
Haejin Woo, Geeta Chhetri, Inhyup Kim, Yoonseop So, Sunho Park, Yonghee Jung, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef -
Comamonas endophytica sp. nov., a novel indole acetic acid producing endophyte isolated from bamboo in China
Jinjun Yue, Fu Yang, Youtie Xiao, Seqiao Lin, Zhengping He, Siyu Wang, Jiayi Zhao, Jinling Yuan, Lubin Li, Lei Liu
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Genome-Based Classification of Pedobacter albus sp. nov. and Pedobacter flavus sp. nov. Isolated from Soil
Nhan Le Thi Tuyet, Jaisoo Kim
Diversity.2024; 16(5): 292. CrossRef -
Sphingobacterium oryzagri sp. nov., isolated from rice paddy soil
Seunghwan Kim, Jun Heo, Hyorim Choi, Daseul Lee, Soon-Wo Kwon, Yiseul Kim
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Paracoccus benzoatiresistens sp. nov., a benzoate resistance and selenite reduction bacterium isolated from wetland
Weidong Mu, Haoran Liu, Bai Guo, Kaiyue Wang, Jinhua Hu, Jianjun Song, Xiuyun Li, Shuzhen Wei, Aijv Liu, Hongliang Liu
Antonie van Leeuwenhoek.2024;[Epub] CrossRef - Oceanimonas pelagia sp. nov., a novel biosurfactant-producing and plastic-degrading potential bacterium isolated from marine coastal sediment
Hsiao-Tsu Yang, Yi-Hsuan Huang, Ying-Ning Ho
Antonie van Leeuwenhoek.2024;[Epub] CrossRef - Aquificae overcomes competition by archaeal thermophiles, and crowding by bacterial mesophiles, to dominate the boiling vent-water of a Trans-Himalayan sulfur-borax spring
Nibendu Mondal, Subhajit Dutta, Sumit Chatterjee, Jagannath Sarkar, Mahamadul Mondal, Chayan Roy, Ranadhir Chakraborty, Wriddhiman Ghosh, Marcos Pileggi
PLOS ONE.2024; 19(10): e0310595. CrossRef - Simplicispira sedimenti sp. nov., isolated from a sediment of drainage ditch in winery
Xing Chen, Yuan-Dong Li, Xiu-Ming Liu, Li Gao, Xing-Kui Zhou, Li-Min Dong, Gang Du, Neeli Habib, Wen-Jun Li, Yan-Qing Duan
Antonie van Leeuwenhoek.2024;[Epub] CrossRef - Lacticaseibacillus jixiensis sp. nov., Isolated from Traditional Chinese Pickle
Si-Tong Song, Chun Yan Li, Chun Tao Gu
Current Microbiology.2024;[Epub] CrossRef - Crenobacter oryzisoli sp. nov., a novel phosphate-solubilizing bacterium isolated from the paddy soil
Shu-Qun Zhang, Cheng-Jie Xie, Ling Yao, Christopher Rensing, Hao Lin, Guo-Hong Liu, Shun-Gui Zhou
Archives of Microbiology.2024;[Epub] CrossRef -
Flavobacterium capsici sp. nov., isolated from the rhizospheric soils of bell pepper (Capsicum annuum L.)
Dong Hyun Cho, Yuxin Peng, Zalfa Humaira, Yu Lim Park, Hyun Jung Kim, Rae-Dong Jeong, Cha Young Kim, Jiyoung Lee
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Blastococcus montanus sp. nov., a multi-stress-resistant and bacteriostatic-producing bacterium isolated from the Flaming Mountain, Xinjiang,China
Kexin Wang, Yang Liu, Xiaowen Cui, Tuo Chen, Guangxiu Liu, Wei Zhang, Zhiyong Han, Gaosen Zhang
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Phylogenomic evaluation of Mangrovimicrobium sediminis gen. nov. sp. nov., the first nitrogen fixing member of the family Halieaceae adapted to mangrove habitat and reclassification of Halioglobus pacificus to Pseudohaliglobus pacificus comb. nov.
Pravin Kumar, Ashish Verma, Pooja Yadav, Joyasree Das, Lalit Kumar, Srinivasan Krishnamurthi
Science of The Total Environment.2024; 933: 172995. CrossRef -
Arcobacteraceae
are ubiquitous mixotrophic bacteria playing important roles in carbon, nitrogen, and sulfur cycling in global oceans
Jianyang Li, Shizheng Xiang, Yufei Li, Ruolin Cheng, Qiliang Lai, Liping Wang, Guizhen Li, Chunming Dong, Zongze Shao, Thomas J. Sharpton
mSystems.2024;[Epub] CrossRef - Niabella digestorum sp. nov., a High Cell-Surface Hydrophobic Bacterium Isolated from Waste Digestion System
Ling Zhang, Chuansheng Geng, Xingjuan Chen, Letian Chen, Tongchu Deng, Meiying Xu
Current Microbiology.2024;[Epub] CrossRef - Safety assessment, whole genome sequence, and metabolome analysis of Streptococcus thermophilus CICC 20372 for bone cement fermentation
Rongshan Li, Yangfan Hu, Yang Xu, Jinlong Zhou, Yunfang Li, Qing Liu, Bo Yu
Archives of Microbiology.2024;[Epub] CrossRef -
Methylocystis suflitae sp. nov., a novel type II methanotrophic bacterium isolated from landfill cover soil
Christopher T. Garner, Krithivasan Sankaranarayanan, Christopher A. Abin, Rosa M. Garner, Haiyuan Cai, Paul A. Lawson, Lee R. Krumholz
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Polysaccharide degradation in Cellvibrionaceae: Genomic insights of the novel chitin-degrading marine bacterium, strain KSP-S5-2, and its chitinolytic activity
Nyok-Sean Lau, Go Furusawa
Science of The Total Environment.2024; 912: 169134. CrossRef - Nitrogen source influences the interactions of comammox bacteria with aerobic nitrifiers
Katherine Jeanne Vilardi, Juliet Johnston, Zihan Dai, Irmarie Cotto, Erin Tuttle, Ariana Patterson, Aron Stubbins, Kelsey J. Pieper, Ameet J. Pinto, Erik F. Y. Hom
Microbiology Spectrum.2024;[Epub] CrossRef - Physiological and Genomic Elucidation of Cold-Resilient Rhizobacteria Reveals Plant Growth Promotion by Siderophore Optimization and Enhanced Biocontrol Potential Against Fungal Pathogens
Pallavi Sharma, Girija Kaushal, Shruti Sinai Borker, Ayush Lepcha, Anil Kumar, Rakshak Kumar
Journal of Plant Growth Regulation.2024;[Epub] CrossRef -
Falsiroseomonas oryziterrae sp. nov., and Falsiroseomonas oryzae sp. nov., isolated from rice paddy soil
Hyo-Jin Lee, Kyung-Sook Whang
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Pseudoalteromonas simplex sp. nov. Isolated from the Skin of Bandtail Puffer Fish (Sphoeroides spengleri)
Hannah K. Mattsson, Mayanne A. M. de Freitas, Gustavo P. R. de Azevedo, Vinicius Salazar, Verônica V. Vieira, Diogo A. Tschoeke, Cristiane C. Thompson, Fabiano L. Thompson
Current Microbiology.2024;[Epub] CrossRef - Genomic evidence that Ornithinicoccus soli Jiang et al. 2020 is a later heterotypic synonym of Segeticoccus rhizosphaerae Lee and Whang 2020
Qing Liu, Yu-Hua Xin
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef -
Roseobacter fucihabitans sp. nov., isolated from the brown alga Fucus spiralis
Sarah Hahnke, Martine Berger, Andrea Schlingloff, Isha Athale, Jacqueline Wolf, Meina Neumann-Schaal, Adenike Adenaya, Anja Poehlein, Rolf Daniel, Jörn Petersen, Thorsten Brinkhoff
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Complete genome sequence of a novel Prescottella sp. R16 isolate from deep-sea sediments in the western Pacific
Lingqi Ma, Yuqi Bai, Weili Wang, Shengxiang Pei, Gaiyun Zhang
Frontiers in Genetics.2024;[Epub] CrossRef - Randomized Clinical Trials Demonstrate the Safety Assessment of Alkalihalobacillus clausii AO1125 for Use as a Probiotic in Humans
Gissel García, Josanne Soto, Antonio Díaz, Jesús Barreto, Carmen Soto, Ana Beatriz Pérez, Suselys Boffill, Raúl De Jesús Cano
Microorganisms.2024; 12(11): 2299. CrossRef - Ureibacillus aquaedulcis sp. nov., isolated from freshwater well and reclassification of Lysinibacillus yapensis and Lysinibacillus antri as Ureibacillus yapensis comb. nov. and Ureibacillus antri comb. nov.
Amit Yadav, Ruchi Teware, Agrima Bhatt, Yash Bhavsar, Akanksha Maurya, Vipool Thorat, Venkata Ramana Vemuluri, Kiran Kirdat
Archives of Microbiology.2024;[Epub] CrossRef - Diverse and specialized metabolic capabilities of microbes in oligotrophic built environments
Xinzhao Tong, Danli Luo, Marcus H. Y. Leung, Justin Y. Y. Lee, Zhiyong Shen, Wengyao Jiang, Christopher E. Mason, Patrick K. H. Lee
Microbiome.2024;[Epub] CrossRef - Sabulicella glaciei sp. nov., Isolated from Glacier, and Reclassification of Roseomonas rubea, Roseomonas ponticola and Roseomonas oleicola as Neoroseomonas rubea comb. nov., Falsiroseomonas ponticola comb. nov. and Falsiroseomonas oleicola comb. nov
Qing Liu, Yu-Hua Xin
Current Microbiology.2024;[Epub] CrossRef - A functionally augmented carbohydrate utilization locus from herbivore gut microbiota fueled by dietary β-glucans
Fernanda Mandelli, Marcele Pandeló Martins, Mariana Chinaglia, Evandro Antonio de Lima, Mariana Abrahão Bueno Morais, Tatiani Brenelli Lima, Lucélia Cabral, Renan Augusto Siqueira Pirolla, Felipe Jun Fuzita, Douglas Antônio Alvaredo Paixão, Maxuel de Oliv
npj Biofilms and Microbiomes.2024;[Epub] CrossRef - Active coexistence of the novel gammaproteobacterial methanotroph ‘Ca.Methylocalor cossyra’ CH1 and verrucomicrobial methanotrophs in acidic, hot geothermal soil
Changqing Liu, Rob A. Schmitz, Arjan Pol, Carmen Hogendoorn, Daniël Verhagen, Stijn H. Peeters, Theo A. van Alen, Geert Cremers, Rob A. Mesman, Huub J. M. Op den Camp
Environmental Microbiology.2024;[Epub] CrossRef - Fodinisporobacter ferrooxydans gen. nov., sp. nov.—A Spore-Forming Ferrous-Oxidizing Bacterium Isolated from a Polymetallic Mine
Zhen Jiang, Xiutong Li, Zonglin Liang, Zebao Tan, Nan Zhou, Ying Liu, Zhenghua Liu, Huaqun Yin, Kun Luo, Supawadee Ingsriswang, Shuangjiang Liu, Chengying Jiang
Microorganisms.2024; 12(5): 853. CrossRef -
Massilia agrisoli sp. nov., isolated from rhizospheric soil of banana
Md. Amdadul Huq, Juncai Ma, Sathiyaraj Srinivasan, Md. Anowar Khasru Parvez, M. Mizanur Rahman, Masoumeh Naserkheil, Md. Abuhena, Pulak Maitra, Fahadul Islam, Kihong NAM, Jong-Hyun Park, Shahina Akter
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Tamlana laminarinivorans sp. nov. and Tamlana sargassicola sp. nov., two novel species isolated from Sargassum, show genomic and physiological adaptations for a Sargassum-associated lifestyle
Jin Li, Yumei Liang, Zhixiao He, Lu An, Yongjin Liu, Mingqi Zhong, Zhong Hu
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Ecophysiological and Genomic Characterization of the Freshwater Complete Ammonia OxidizerNitrospirasp. Strain BO4
Sabita Ghimire-Kafle, Matt E. Weaver, Annette Bollmann, Jennifer B. Glass
Applied and Environmental Microbiology.2023;[Epub] CrossRef - Bacteroides faecium sp. nov. isolated from human faeces
Juseok Kim, Hye Seon Song, Joon Yong Kim, Tae Woong Whon, Won-Hyong Chung, Young-Do Nam, Yoon-E Choi, Seong Woon Roh
International Journal of Systematic and Evolutionary Microbiology.2023;[Epub] CrossRef - A minireview on the bioinformatics analysis of mobile gene elements in microbiome research
Jana Schwarzerova, Anastasiya Labanava, Ivan Rychlik, Margaret Varga, Darina Cejkova
Frontiers in Bacteriology.2023;[Epub] CrossRef -
Curtanaerobium respiraculi gen. nov., sp. nov., a novel anaerobic bacterium isolated from human bronchoalveolar lavage fluid
Yifan Sun, Likun Wang, Dexing Han, Jianjie Li, Yuejiao Liu, Yafang Tan, Zhiyuan Pan, Ruifu Yang, Pinghua Qu, Ziping Wang, Yujing Bi
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Faecalibacterium hominis Liu et al. 2023 is a later heterotypic synonym of Faecalibacterium duncaniae Sakamoto et al. 2022
Mitsuo Sakamoto, Naomi Sakurai, Hiroki Tanno, Takao Iino, Moriya Ohkuma, Akihito Endo
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Trichlorobacter ammonificans, a dedicated acetate-dependent ammonifier with a novel module for dissimilatory nitrate reduction to ammonia
Dimitry Y Sorokin, Tamara V Tikhonova, Hanna Koch, Eveline M van den Berg, Renske S Hinderks, Martin Pabst, Natalia I Dergousova, Anastasia Y Soloveva, Gijs J Kuenen, Vladimir O Popov, Mark C M van Loosdrecht, Sebastian Lücker
The ISME Journal.2023; 17(10): 1639. CrossRef - Limobrevibacterium gyesilva gen. nov., sp. nov., Isolated from Forest Soil
Nhan Le Thi Tuyet, Jaisoo Kim
Diversity.2023; 15(5): 684. CrossRef -
Microbacterium tenebrionis sp. nov. and Microbacterium allomyrinae sp. nov., isolated from larvae of Tenebrio molitor L. and Allomyrina dichotoma, respectively
Soon Dong Lee, In Seop Kim
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Roseateles albus sp. nov., Roseateles koreensis sp. nov. and Janthinobacterium fluminis sp. nov., isolated from freshwater at Jucheon River, and emended description of Roseateles aquaticus comb. nov.
Sunho Park, Inhyup Kim, Geeta Chhetri, Yoonseop So, Yonghee Jung, Haejin Woo, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Species-specificity of the secondary biosynthetic potential in Bacillus
Qun-Jian Yin, Ti-Ti Ying, Zhen-Yi Zhou, Gang-Ao Hu, Cai-Ling Yang, Yi Hua, Hong Wang, Bin Wei
Frontiers in Microbiology.2023;[Epub] CrossRef - Taxonomic Study of Three Novel Paenibacillus Species with Cold-Adapted Plant Growth-Promoting Capacities Isolated from Root of Larix gmelinii
Han Xue, Yan Tu, Tengfei Ma, Ning Jiang, Chungen Piao, Yong Li
Microorganisms.2023; 11(1): 130. CrossRef - Characterization and Antioxidant Activity of Exopolysaccharides Produced by Lysobacter soyae sp. nov Isolated from the Root of Glycine max L.
Inhyup Kim, Geeta Chhetri, Yoonseop So, Sunho Park, Yonghee Jung, Haejin Woo, Taegun Seo
Microorganisms.2023; 11(8): 1900. CrossRef - Cyclitol metabolism is a central feature of Burkholderia leaf symbionts
Bram Danneels, Monique Blignaut, Guillaume Marti, Simon Sieber, Peter Vandamme, Marion Meyer, Aurélien Carlier
Environmental Microbiology.2023; 25(2): 454. CrossRef - Sphingomonas abietis sp. nov., an Endophytic Bacterium Isolated from Korean Fir
Lingmin Jiang, Hanna Choe, Yuxin Peng, Doeun Jeon, Donghyun Cho, Yue Jiang, Ju Huck Lee, Cha Young Kim, Jiyoung Lee
Journal of Microbiology and Biotechnology.2023; 33(10): 1292. CrossRef - Description of Brachybacterium sillae sp. nov., a thermophilic bacterium isolated from a hot spring
Dariimaa Ganbat, DoKyung Oh, Yong-Jik Lee, Dong-Woo Lee, Seong-Bo Kim, Won-Jae Chi, Ki-Eun Lee, Byoung-Hee Lee, You-Jung Jung, Jung-Sook Lee, Sang-Jae Lee
Antonie van Leeuwenhoek.2023; 116(8): 791. CrossRef - Bacillus velezensis RC116 Inhibits the Pathogens of Bacterial Wilt and Fusarium Wilt in Tomato with Multiple Biocontrol Traits
Honghong Dong, Ruixiang Gao, Yijie Dong, Qing Yao, Honghui Zhu
International Journal of Molecular Sciences.2023; 24(10): 8527. CrossRef - Cultivation of marine bacteria of the SAR202 clade
Yeonjung Lim, Ji-Hui Seo, Stephen J. Giovannoni, Ilnam Kang, Jang-Cheon Cho
Nature Communications.2023;[Epub] CrossRef - Complex evolutionary history of photosynthesis in Bradyrhizobium
Juanita R. Avontuur, P. Markus Wilken, Marike Palmer, Martin P. A. Coetzee, Tomasz Stępkowski, Stephanus N. Venter, Emma T. Steenkamp
Microbial Genomics
.2023;[Epub] CrossRef -
Brevibacillus ruminantium sp. nov., isolated from cow faeces
Seunghwan Kim, Jun Heo, Soon-Wo Kwon, Daseul Lee, Byeong-Hak Han, Seung-Beom Hong, Yiseul Kim
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Rhizobium acaciae sp. nov., a new nitrogen-fixing symbiovar isolated from root nodules of Acacia saligna in Tunisia
Jihed Hsouna, Houda Ilahi, Jia-Cheng Han, Takwa Gritli, Walid Ellouze, Xiao Xia Zhang, Maroua Mansouri, Praveen Rahi, Mustapha Missbah El Idrissi, Mouad Lamrabet, M'hamed Oubla, Pierre Emmanuel Courty, Daniel Wipf, James T. Tambong, Bacem Mnasri
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Asticcacaulis aquaticus sp. nov., Asticcacaulis currens sp. nov. and Asticcacaulis machinosus sp. nov., isolated from streams in PR China
Huibin Lu, Li Chen, Lingyang Kong, Linpei Huang, Guangjie Chen
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Maritalea mediterranea sp. nov., isolated from marine plastic residues
Àngela Vidal-Verdú, Esther Molina-Menor, Leila Satari, Javier Pascual, Juli Peretó, Manuel Porcar
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Acidaminococcus homini s sp. nov., Amedibacillus hominis sp. nov., Lientehia hominis gen. nov. sp. nov., Merdimmobilis hominis gen. nov. sp. nov., and Paraeggerthella hominis sp. nov., isolated from human faeces
Rashidin Abdugheni, Dan-Hua Li, Yu-Jing Wang, Meng-Xuan Du, Nan Zhou, Chang Liu, Shuang-Jiang Liu
International Journal of Systematic and Evolutionary Microbiology.2023;[Epub] CrossRef -
Streptomyces albidoflavus
Q antifungal metabolites inhibit the ergosterol biosynthesis pathway and yeast growth in fluconazole-resistant
Candida glabrata
: phylogenomic and metabolomic analyses
Celia Bautista-Crescencio, Arturo Casimiro-Ramos, M. Jonathan Fragoso-Vázquez, José Correa-Basurto, Carlos Olano, César Hernández-Rodríguez, Lourdes Villa-Tanaca, Edward Sionov
Microbiology Spectrum.2023;[Epub] CrossRef -
Neopusillimonas aromaticivorans sp. nov. isolated from poultry manure
Shih-Yao Lin, Tzu-Yu Lin, Asif Hameed, Yu-Shan Tang, Chiu-Chung Young
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Microbacterium nymphoidis sp. nov. and Microbacterium festucae sp. nov., two novel species with high plant-promoting potential isolated from wetland plants in China
Chunyi Li, Xiaoqian Jin, Fu Yang, Jiayi Zhao, Siyu Wang, Qiwu Sun, Lubin Li, Lei Liu
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Salipiger pentaromativorans sp. nov., a polycyclic aromatic hydrocarbon-degrading bacterium isolated from mangrove sediment
Jiangwei Li, Qiliang Lai, Anyi Hu, Huijie Liu, Dan Qin, Xiaoyong Yang, Yun Tian, Chang-Ping Yu
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Dermatobacter hominis gen. nov., sp. nov., a new member of the family Iamiaceae, revealed the potential utilisation of skin-derived metabolites
HyungWoo Jo, Chaeyun Baek, Young Mok Heo, Hye-Been Kim, Haeun Lee, Seunghyun Kang, Seyoung Mun, Yunseok Oh, Doyeong Ko, Kyudong Han, Raúl Riesco, Martha E. Trujillo, Dong-Geol Lee
Antonie van Leeuwenhoek.2023; 116(11): 1139. CrossRef - Cerina litoralis gen. nov., sp. nov., a novel potential polysaccharide degrading bacterium of the family Flavobacteriaceae, isolated from marine sediment
Ya-Wei Wang, Xin-Hui Wang, Jing Zhang, Zong-Jun Du, Da-Shuai Mu
Antonie van Leeuwenhoek.2023; 116(12): 1447. CrossRef - Sphingomonas liriopis sp. nov., Sphingomonas donggukensis sp. nov., and Sphingomonas tagetis sp. nov., isolated from Liriope platyphylla fruit, soil, and Tagetes patula roots
Inhyup Kim, Geeta Chhetri, Yoonseop So, Yonghee Jung, Sunho Park, Taegun Seo
Archives of Microbiology.2023;[Epub] CrossRef - Characterization of phytopathogen-preying Hyalangium versicolor sp. nov., and proposal for the reclassification of Cystobacter gracilis as Hyalangium gracile comb. Nov
Xianjiao Zhang, Guangda Feng, Yang Liu, Jiali Li, Xiaoqin Deng, Qing Yao, Honghui Zhu
Archives of Microbiology.2023;[Epub] CrossRef - Thiorhodovibrio frisius and Trv. litoralis spp. nov., Two Novel Members from a Clade of Fastidious Purple Sulfur Bacteria That Exhibit Unique Red-Shifted Light-Harvesting Capabilities
Anika Methner, Steven Kuzyk, Jörn Petersen, Sabine Bauer, Henner Brinkmann, Katja Sichau, Gerhard Wanner, Jacqueline Wolf, Meina Neumann-Schaal, Petra Henke, Marcus Tank, Cathrin Spröer, Boyke Bunk, Jörg Overmann
Microorganisms.2023; 11(10): 2394. CrossRef - Genomic attributes and characterization of novel exopolysaccharide-producing bacterium Halomonas piscis sp. nov. isolated from jeotgal
Bora Kim, Ah-In Yang, Hae-In Joe, Ki Hyun Kim, Hanna Choe, Sung-Hong Joe, Min Ok Jun, Na-Ri Shin
Frontiers in Microbiology.2023;[Epub] CrossRef - Corynebacterium lipophilum sp. nov., a lipophilic bacterium isolated from clinical breast specimens and emended description of the species Corynebacterium pilbarense
Qiang Luo, Haimin Luo, Tianqi Zhang, Xiaofang Liu, Xiaowei Chen, Qianming Chen, Junhui Feng, Pinghua Qu, Cha Chen, Ning Xu
Antonie van Leeuwenhoek.2023; 116(10): 1091. CrossRef -
Arcobacter roscoffensis sp. nov., a marine bacterium isolated from coastal seawater
Javier Pascual, Cendrella Lepleux, Anika Methner, Cathrin Spröer, Boyke Bunk, Jörg Overmann
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Ferranicluibacter rubi gen. nov., sp. nov., a new member of family Rhizobiaceae isolated from stems of elmleaf blackberry (Rubus ulmifolius Schott) in Northwest Spain
Rocio Roca-Couso, Jose David Flores-Felix, Jose M. Igual, Paula García-Fraile, Encarna Velázquez, Raúl Rivas
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Sulfurovum mangrovi sp. nov., an obligately chemolithoautotrophic, hydrogen-oxidizing bacterium isolated from coastal marine sediments
Yufei Li, Shasha Wang, Bowen Ji, Qing Yuan, Shiping Wei, Qiliang Lai, Kaiyue Wu, Lijing Jiang, Zongze Shao
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Hominibacterium faecale gen. nov., sp. nov., an anaerobic l-arginine-degrading bacterium isolated from human feces
Noori Borhanudin, Min Yang, Andrei V. Chaplin, Jiang Li, Qiong Wang, Li-rong Dai, Ke-jia Wu, Shi-chun Ma, Boris A. Efimov, Lei Cheng
Archives of Microbiology.2023;[Epub] CrossRef -
Curtobacterium caseinilyticum sp. nov., Curtobacterium subtropicum sp. nov. and Curtobacterium citri sp. nov., isolated from citrus phyllosphere
Guang-Da Feng, Jiali Li, Songzhen Yang, Jun Zhang, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Vibrio intestinalis sp. nov., isolated from intestine of seahorse
Libo Yu, Shiping Wei, Zhidong Zhou, Zongze Shao
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Chitinophaga nivalis sp. nov., isolated from forest soil in Pyeongchang, Republic of Korea
Ngoc Hoang Trinh, Jaisoo Kim
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Reclassification of Clostridium cocleatum, Clostridium ramosum, Clostridium spiroforme and Clostridium saccharogumia as Thomasclavelia cocleata gen. nov., comb. nov., Thomasclavelia ramosa comb. nov., gen. nov., Thomasclavelia spiroformis comb. nov. and T
Paul A. Lawson, Liz Saavedra Perez, Krithivasan Sankaranarayanan
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Paracoccus albicereus sp. nov., isolated from the shallow-sea hydrothermal system off Kueishantao Island
Yajie He, Dan Lin, Beihan Chen, Xinzhu Liu, Jianing Ye, Jia Sun, Kai Tang
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Flectobacillus longus sp. nov. and Flectobacillus rivi sp. nov., isolated from streams in China and reclassification of Flectobacillus rhizosphaerae as a synonym of Flectobacillus roseus
Huibin Lu, Ping Li, Li Chen, Guangjie Chen
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Aequorivita vitellina sp. nov. and Aequorivita xiaoshiensis sp. nov., isolated from marine sediment
Ya-Wei Wang, Jing Zhang, Shu-Xin Wang, Zong-Jun Du, Da-Shuai Mu
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Two novel symbiovars of Bradyrhizobium yuanmingense, americaense and caribense, the symbiovar tropici of Bradyrhizobium pachyrhizi and the symbiovar cajani of Bradyrhizobium cajani are microsymbionts of the legume Cajanus cajan in Dominican Republic
José David Flores-Félix, Fernando Sánchez-Juanes, Juan Araujo, César Antonio Díaz-Alcántara, Encarna Velázquez, Fernando González-Andrés
Systematic and Applied Microbiology.2023; 46(5): 126454. CrossRef -
Frateuria soli sp. nov. and Frateuria edaphi sp. nov., isolated from greenhouse soil
Miyoung Won, Jun Heo, Hang-Yeon Weon, Daseul Lee, Byeong-Hak Han, Seung-Beom Hong, Soon-Wo Kwon
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Four new Microbacterium species isolated from seaweeds and reclassification of five Microbacterium species with a proposal of Paramicrobacterium gen. nov. under a genome-based framework of the genus Microbacterium
Soon Dong Lee, Hong Lim Yang, In Seop Kim
Frontiers in Microbiology.2023;[Epub] CrossRef -
Actinomadura terrae sp. nov. and Actinomadura litoris OS3-89, isolated from rhizosphere soil of cactus
Soon Dong Lee, Hong Lim Yang, In Seop Kim, Hanna Choe, Ji-Sun Kim
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Bioplastic (poly-3-hydroxybutyrate)-producing Massilia endophytica sp. nov., isolated from Cannabis sativa L. ‘Cheungsam’
Doeun Jeon, Lingmin Jiang, Ki-Hyun Kim, Yuxin Peng, Donghyun Cho, Rae-Dong Jeong, Cha Young Kim, Jae Cheol Jeong, Jiyoung Lee
Scientific Reports.2023;[Epub] CrossRef -
Similar but different: Characterization of
dddD
gene–mediated DMSP metabolism among coral-associated
Endozoicomonas
Yu-Jing Chiou, Ya-Fan Chan, Sheng-Ping Yu, Chih-Ying Lu, Silver Sung-Yun Hsiao, Pei-Wen Chiang, Ting-Chang Hsu, Po-Yu Liu, Naohisa Wada, Yu Lee, Wann-Neng Jane, Der-Chuen Lee, Yu-Wen Huang, Sen-Lin Tang
Science Advances.2023;[Epub] CrossRef -
Halomonas dongshanensis sp. nov., isolated from the seawater of Dongshan Island
Wen-zhen Lin, Lin-feng Gong, Ying Guo, Ru-zhen Liu, Wei Xu, Qi-yang Guan, Chi-ming Guo, Zhi-kai Lin, Hong-yan Meng, Xiao-yao Chen
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Reclassification of Sabulilitoribacter multivorans and Sabulilitoribacter arenilitoris as Flaviramulus multivorans comb. nov. and Wocania arenilitoris comb. nov., respectively, based on genome sequence analysis
Ang Liu, Xinyue Dong, Wanting Wang, Jiayi Qin, Hongyu Leng, Chenlong Yan, Longyu Zhao
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Tahibacter harae sp. nov., isolated from pig farm soil in Guangdong, PR China
Haixin Chen, Yang Zhou, Qing Yao, Hongxia Jiang, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Paenibacillus soyae sp. nov., isolated from the rhizosphere of soya bean
Hui Zhao, Yue Su, Qihui Gu, Jumei Zhang, Xinqiang Xie, Qingping Wu
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Maribacter aquimaris sp. nov., isolated from seawater adjacent to Fildes Peninsula, Antarctica
Yanfeng Zhang, Yanwu Zhai, Lulu Mu, Miaomiao Hu, Wei Fang, Yazhong Xiao, Zemin Fang
Antonie van Leeuwenhoek.2023; 116(8): 753. CrossRef - Three novel marine species of the genus Reichenbachiella exhibiting degradation of complex polysaccharides
Neak Muhammad, Forbes Avila, Olga I. Nedashkovskaya, Song-Gun Kim
Frontiers in Microbiology.2023;[Epub] CrossRef - Isolation of Spirosoma foliorum sp. nov. from the fallen leaf of Acer palmatum by a novel cultivation technique
Ho Le Han, Dian Alfian Nurcahyanto, Neak Muhammad, Yong-Jae Lee, Tra T. H. Nguyen, Song-Gun Kim, Sook Sin Chan, Kuan Shiong Khoo, Kit Wayne Chew, Pau Loke Show, Thi Ngoc Thu Tran, Thi Dong Phuong Nguyen, Chen Yaw Chiu
Scientific Reports.2023;[Epub] CrossRef - Identification and genomic analysis of Pseudosulfitobacter koreense sp. nov. isolated from toxin-producing dinoflagellate Alexandrium pacificum
Yue Jiang, Zhun Li
Archives of Microbiology.2023;[Epub] CrossRef -
Agromyces larvae sp. nov., a novel actinobacterium isolated from gut of larvae of Protaetia brevitarsis seulensis
Miyoung Won, Parthiban Subramanian, Seunghwan Kim, Jun Heo, Hanako Naito, Tomomi Asano, Moriyuki Hamada, Soon-Wo Kwon
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Antioxidant prodigiosin-producing cold-adapted Janthinobacterium sp. ERMR3:09 from a glacier moraine: Genomic elucidation of cold adaptation and pigment biosynthesis
Srijana Mukhia, Anil Kumar, Rakshak Kumar
Gene.2023; 857: 147178. CrossRef -
Oryzibacter oryziterrae gen. nov., sp. nov., isolated from rice paddy soil
Hyo-Jin Lee, Kyung-Sook Whang
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Trinickia mobilis sp. nov. and Trinickia acidisoli sp. nov., isolated from soil
You-qi Wang, Bing-nan Zhao, Xiu-yin Guo, Ke-cheng Wu, Li-hong Qiu
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Metabolic Versatility of the FamilyHalieaceaeRevealed by the Genomics of Novel Cultured Isolates
Shan-Hui Li, Ilnam Kang, Jang-Cheon Cho, Eva C. Sonnenschein
Microbiology Spectrum.2023;[Epub] CrossRef - Description of Luteibacter aegosomatis sp. nov., Luteibacter aegosomaticola sp. nov., and Luteibacter aegosomatissinici sp. nov. isolated from the Intestines of Aegosoma sinicum Larvae
Hae-In Joe, Jee-Won Choi, June-Young Lee, Hojun Sung, Su-Won Jeong, Yun-Seok Jeong, Jae-Yun Lee, Jin-Woo Bae
Journal of Microbiology.2023; 61(6): 603. CrossRef -
Alkalimarinus alittae sp. nov., isolated from gut of marine sandworm (Alitta virens) and emended description of the genus Alkalimarinus
Ah-In Yang, Hae-In Joe, Hanna Choe, Han Sol Kim, Mi Kyung Eom, Zhun Li, Min Ok Jun, Bora Kim, Jung-Sook Lee, Na-Ri Shin
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Pan-Genome Analyses of the Genus Cohnella and Proposal of the Novel Species Cohnella silvisoli sp. nov., Isolated from Forest Soil
Chunling Wang, Lutian Mao, Gegen Bao, Honghui Zhu
Microorganisms.2023; 11(11): 2726. CrossRef - Five novel Hymenobacter species isolated from air: Hymenobacter cellulosilyticus sp. nov., Hymenobacter cellulosivorans sp. nov., Hymenobacter aerilatus sp. nov., Hymenobacter sublimis sp. nov. and Hymenobacter volaticus sp. nov.
Yiseul Kim, Parthiban Subramanian, Hyorim Choi, Hang-Yeon Weon, Seunghwan Kim, Soon-Wo Kwon, Daseul Lee, Byeong-Hak Han, Seung-Beom Hong, Jun Heo
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Vogesella aquatica sp. nov. and Vogesella margarita sp. nov., isolated from rivers in Southwest China
Huibin Lu, Li Chen, Lingyang Kong, Linpei Huang, Guangjie Chen
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - tilS and rpoB: New Molecular Markers for Phylogenetic and Biodiversity Studies of the Genus Thiothrix
Nikolai V. Ravin, Dmitry D. Smolyakov, Nikita D. Markov, Alexey V. Beletsky, Andrey V. Mardanov, Tatyana S. Rudenko, Margarita Yu. Grabovich
Microorganisms.2023; 11(10): 2521. CrossRef - Poseidonibacter ostreae sp. nov., Isolated from the Gut of Ostrea from the Seomjin River
Kiwoon Baek, Sumin Jang, Eu Jin Chung, Shi Hyun Ryu, Ahyoung Choi
Diversity.2023; 15(8): 920. CrossRef -
Paenibacillus dendrobii sp. nov., an indole-3-acetic acid-producing endophytic bacterium isolated from Dendrobium nobile
Yadong Hu, Hongjie Li, Yaoyi Chen, Qiling Zhang, Shigang Zheng, Dan Rao, Ze Chun, Ruoxi Zhao
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Gillisia lutea sp. nov., isolated from marine aluminium residues from the Mediterranean sea
Àngela Vidal-Verdú, Esther Molina-Menor, Javier Pascual, Juli Peretó, Manuel Porcar
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Flavobacterium potami sp. nov., a multi-metal resistance genes harbouring bacterium isolated from shallow river silt
Shucheng Li, Sidi Mao, Weidong Mu, Bai Guo, Chen Li, Qing Zhu, Xiaoxiao Hou, Yanfang Zhao, Shuzhen Wei, Hongliang Liu, Aiju Liu
Antonie van Leeuwenhoek.2023; 116(3): 265. CrossRef -
Ligilactobacillus cholophilus sp. nov., isolated from pickled potherb mustard (Brassica juncea Coss.)
Quanlu Ren, Danqi Wang, Jin Han, Jing Wang, Zhenmin Liu, Zhengjun Wu
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - EasyCGTree: a pipeline for prokaryotic phylogenomic analysis based on core gene sets
Dao-Feng Zhang, Wei He, Zongze Shao, Iftikhar Ahmed, Yuqin Zhang, Wen-Jun Li, Zhe Zhao
BMC Bioinformatics.2023;[Epub] CrossRef - Genome-based analyses of the genus Acidovorax: proposal of the two novel genera Paracidovorax gen. nov., Paenacidovorax gen. nov. and the reclassification of Acidovorax antarcticus as Comamonas antarctica comb. nov. and emended description of the genus Ac
Juan Du, Yang Liu, Honghui Zhu
Archives of Microbiology.2023;[Epub] CrossRef - Genomic insights of an alkaliphilic bacterium Halalkalibacter alkaliphilus sp. nov. isolated from an Indian Soda Lake
Amaraja Joshi, Sonia Thite, Tushar Lodha, Neetha Joseph, Purva Mengade
Antonie van Leeuwenhoek.2023; 116(5): 435. CrossRef - Genome-Wide Pathway Exploration of the Epidermidibacterium keratini EPI-7T
Yunseok Oh, Seyoung Mun, Young-Bong Choi, HyungWoo Jo, Dong-Geol Lee, Kyudong Han
Microorganisms.2023; 11(4): 870. CrossRef -
Pseudomonas cucumis sp. nov., isolated from the rhizosphere of crop plants
Kaiji Liao, Jianying Liu, Yi-Lin Gu, Can Wang, Hai-Lei Wei
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Three marine species of the genus Fulvivirga, rich sources of carbohydrate-active enzymes degrading alginate, chitin, laminarin, starch, and xylan
Tra T. H. Nguyen, Tien Q. Vuong, Ho Le Han, Zhun Li, Yong-Jae Lee, Jaeho Ko, Olga I. Nedashkovskaya, Song-Gun Kim
Scientific Reports.2023;[Epub] CrossRef - Novosphingobium beihaiensis sp. nov., a novel pesticide-tolerant bacterium isolated from mangrove sediments
Wenjin Hu, Yiying Huang, Yingjing Liu, Xiaoying Zhou, Shushi Huang, Jiemei Chu, Xinli Pan
Antonie van Leeuwenhoek.2023; 116(11): 1151. CrossRef - Paracoccus onchidii sp. nov., a moderately halophilic bacterium isolated from a marine invertebrate from the South China Sea
Shan-shan Xu, Qi-liang Lai, Zeng-zhi Liu, Ying Xu
Antonie van Leeuwenhoek.2023; 116(8): 801. CrossRef -
Ideonella oryzae sp. nov., isolated from soil, and Spirosoma liriopis sp. nov., isolated from fruits of Liriope platyphylla
Yonghee Jung, Geeta Chhetri, Inhyup Kim, Yoonseop So, Sunho Park, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Mariniradius sediminis sp. nov., a multi-xenobiotics degrading genes harbouring bacterium isolated from sediment of river
Shucheng Li, Weidong Mu, Haoran Liu, Bai Guo, Sidi Mao, Changqing Su, Hui Li, Zhiqiang Zhang, Aijv Liu, Shuzhen Wei, Hongliang Liu
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Description of Xanthocytophaga agilis sp. nov. and Xanthocytophaga flavus sp. nov. of the new genus Xanthocytophaga gen. nov and the proposal of Rhodocytophagaceae fam. nov. within the order Cytophagales
Xianjiao Zhang, Guang-Da Feng, Yang Liu, Fan Yang, Yanxuan Li, Xiaoqin Deng, Honghui Zhu, Qing Yao
Archives of Microbiology.2023;[Epub] CrossRef - A nostoxanthin-producing bacterium, Sphingomonas nostoxanthinifaciens sp. nov., alleviates the salt stress of Arabidopsis seedlings by scavenging of reactive oxygen species
Lingmin Jiang, Jiyoon Seo, Yuxin Peng, Doeun Jeon, Ju Huck Lee, Cha Young Kim, Jiyoung Lee
Frontiers in Microbiology.2023;[Epub] CrossRef -
Halobacillus salinarum sp. nov., Halobacillus shinanisalinarum sp. nov. and Halobacillus amylolyticus sp. nov., isolated from saltern soil
Yiseul Kim, Seunghwan Kim, Soon-Wo Kwon, Hang-Yeon Weon, Hanako Naito, Tomomi Asano, Moriyuki Hamada, Jun Heo
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Lignin-oxidizing and xylan-hydrolyzing Vibrio involved in the mineralization of plant detritus in the continental slope
Jianyang Li, Chunming Dong, Biswarup Sen, Qiliang Lai, Linfeng Gong, Guangyi Wang, Zongze Shao
Science of The Total Environment.2023; 854: 158714. CrossRef -
Alteromonas gilva sp. nov. and Erythrobacter fulvus sp. nov., isolated from a tidal mudflat
Sunho Park, Inhyup Kim, Geeta Chhetri, Yoonseop So, Yonghee Jung, Haejin Woo, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Sphingobium nicotianae sp. nov., isolated from tobacco soil
Rongrong Fan, Xiong Luo, Mengjuan Hong, Ruijia Yang, Xinyi Dong, Heli Shi, Mingshun Li
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Investigation of the potential of Brevibacillus spp. for the biosynthesis of nonribosomally produced bioactive compounds by combination of genome mining with MALDI-TOF mass spectrometry
Jennifer Jähne, Stefanie Herfort, Joerg Doellinger, Peter Lasch, Le Thi Thanh Tam, Rainer Borriss, Joachim Vater
Frontiers in Microbiology.2023;[Epub] CrossRef - Phylogenomic analysis of the genus Alcanivorax: proposal for division of this genus into the emended genus Alcanivorax and two novel genera Alloalcanivorax gen. nov. and Isoalcanivorax gen. nov.
Anusha Rai, Gandham Suresh, Biswas Ria, Vighnesh L, Sreya PK, Sahu Ipsita, Chintalapati Sasikala, Chintalapati Venkata Ramana
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Corynebacterium oculi-related bacterium may act as a pathogen and carrier of antimicrobial resistance genes in dogs: a case report
Milena Tresch, Christine Watté, Michele Stengard, Corinne Ritter, Isabelle Brodard, Simon Feyer, Estelle Gohl, Ezgi Akdesir, Vincent Perreten, Sonja Kittl
BMC Veterinary Research.2023;[Epub] CrossRef - Jeongeuplla avenae gen. nov., sp. nov., a novel β-carotene-producing bacterium that alleviates salinity stress in Arabidopsis
Lingmin Jiang, Yuxin Peng, Ki-Hyun Kim, Doeun Jeon, Hanna Choe, Ah-Reum Han, Cha Young Kim, Jiyoung Lee
Frontiers in Microbiology.2023;[Epub] CrossRef - Taxonomic descriptions of Aeromicrobium duanguangcaii sp. nov., Aeromicrobium wangtongii sp. nov. and Aeromicrobium senzhongii sp. nov.
Lin Ye, Gui Zhang, Jing Yang, Caixin Yang, Yue Liu, Ji Pu, Yuyuan Huang, Sihui Zhang, Dong Jin, Shan Lu, Liyun Liu, Jianguo Xu
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Characterization of four novel bacterial species of the genus Sphingomonas, Sphingomonas anseongensis, Sphingomonas alba, Sphingomonas brevis and Sphingomonas hankyongi sp.nov., isolated from wet land
Muhammad Zubair Siddiqi, Govindan Rajivgandhi, Soon-Youl Lee, Wan-Taek Im
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Neiella litorisoli sp. nov., an alginate lyase: producing bacterium from South China Sea, and proposal of Echinimonadaceae fam. nov. in the order Alteromonadales
Jing-Ran Sun, Kun-Lian Mo, Xue Li, Yong-Hua Hu, Zhi-Yuan Liu, Hui-Qin Huang
Archives of Microbiology.2023;[Epub] CrossRef - Paraburkholderia flagellata sp. nov. and Paraburkholderia adhaesiva sp. nov., two novel species isolated from forest soil in Dinghushan Biosphere Reserve in Guangdong, China
Xiu-yin Guo, Ke-cheng Wu, Cheng-zhi Dong, Qiu-mei Zhang, Li-hong Qiu
Antonie van Leeuwenhoek.2023; 116(10): 1023. CrossRef - Comparative genomics reveals environmental adaptability and antimicrobial activity of a novel Streptomyces isolated from soil under black Gobi rocks
Ying Wen, Binglin Zhang, Gaosen Zhang, Minghui Wu, Ximing Chen, Tuo Chen, Guangxiu Liu, Wei Zhang
Antonie van Leeuwenhoek.2023; 116(12): 1407. CrossRef - Phylotaxonomic assessment based on four core gene sets and proposal of a genus definition among the families Paracoccaceae and Roseobacteraceae
Dao-Feng Zhang, Wei He, Zongze Shao, Iftikhar Ahmed, Yuqin Zhang, Wen-Jun Li, Zhe Zhao
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Pseudarthrobacter humi sp. nov., an actinobacterium isolated from soil
Inhyup Kim, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Description of Salinimicrobium tongyeongense sp. nov., isolated from seawater
Dariimaa Ganbat, Dong-Woo Lee, Seong-Bo Kim, Yong-Jik Lee, Gaewon Nam, Won-Jae Chi, Byoung-Hee Lee, You-Jung Jung, Jung-Sook Lee, Sang-Jae Lee
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Biocontrol potential of bacteria belonging to the Bacillus subtilis group against pests and diseases of agricultural interest through genome exploration
Gabriela Teodoro Rocha, Paulo Roberto Martins Queiroz, Priscila Grynberg, Roberto Coiti Togawa, Antônia Débora Camila de Lima Ferreira, Izabela Nunes do Nascimento, Ana Cristina Meneses Mendes Gomes, Rose Monnerat
Antonie van Leeuwenhoek.2023; 116(7): 599. CrossRef -
Mesorhizobium liriopis sp. nov., isolated from the fermented fruit of Liriope platyphylla a medicinal plant
Inhyup Kim, Geeta Chhetri, Yoonseop So, Sunho Park, Yonghee Jung, Haejin Woo, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Tianweitania aestuarii sp. nov., isolated from a coastal dune, reclassification of Corticibacterium populi as Tianweitania populi comb. nov., and emended description of the genus Tianweitania
Ji Hyeon Song, Sooyeon Park, Jung-Sook Lee, Wonyong Kim, Jung-Hoon Yoon
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Roseobacter insulae sp. nov. and Loktanella gaetbuli sp. nov., isolated from tidal flats in the Yellow Sea in Korea
Eun Bee Lee, Sooyeon Park, Wonyong Kim, Jung-Hoon Yoon
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - UFCG: database of universal fungal core genes and pipeline for genome-wide phylogenetic analysis of fungi
Dongwook Kim, Cameron L M Gilchrist, Jongsik Chun, Martin Steinegger
Nucleic Acids Research.2023; 51(D1): D777. CrossRef - Bioassay and Whole-Genome Analysis of Bacillus velezensis FIO1408, a Biocontrol Agent Against Pathogenic Bacteria in Aquaculture
Wenhao Huang, Lingyun Qu, Ping Gao, Guangxun Du
Current Microbiology.2023;[Epub] CrossRef - VBCG: 20 validated bacterial core genes for phylogenomic analysis with high fidelity and resolution
Renmao Tian, Behzad Imanian
Microbiome.2023;[Epub] CrossRef - Neoroseomonas alba sp. nov., Neoroseomonas nitratireducens sp. nov., Paraoseomonas indoligenes sp. nov and Paraoseomonas baculiformis sp. nov., isolated from the rhizosphere of paddy soil
Yoonseop So, Geeta Chhetri, Inhyup Kim, Jiyoun Kim, Sunho Park, Yonghee Jung, Taegun Seo
Antonie van Leeuwenhoek.2023; 116(10): 1009. CrossRef -
Microbacterium plantarum sp. nov. and Microbacterium thalli sp. nov., two endophytic metal-resistant bacteria isolated from Sphaeralcea angustifolia (Cav.) G. Don and Prosopis laevigata (Humb. et Bonpl. ex Willd) M.C. Johnston
Ivan Arroyo-Herrera, Brenda Román-Ponce, Rafael Bustamante-Brito, Joseph Guevara-Luna, Violeta Larios-Serrato, Lorena Carro, Jose Mariano Igual, Otto Geiger, Ayixon Sánchez-Reyes, Paulina Estrada-de los Santos, En Tao Wang, María Soledad Vásquez-Murrieta
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Genome insight and probiotic potential of three novel species of the genus Corynebacterium
Md Shamsuzzaman, Ram Hari Dahal, Shukho Kim, Jungmin Kim
Frontiers in Microbiology.2023;[Epub] CrossRef - Marinobacterium lacunae sp. nov. isolated from estuarine sediment
Srinivas Naga Radha Tanuku, Anil Kumar Pinnaka, Swarnaprava Behera, Aditya Singh, Sudharani Pydi, Gunjan Vasudeva, Bhumika Vaidya, Gunjan Sharma, Sampath Kumar Ganta, Naveen Sagar Garbhapu
Archives of Microbiology.2023;[Epub] CrossRef -
Solicola gregarius gen. nov., sp. nov., a soil actinobacterium isolated after enhanced cultivation with Micrococcus luteus culture supernatant
Marco A. Lopez Marin, Jachym Suman, Kunal Jani, Pavel Ulbrich, Tomas Cajthaml, Alena Filipova, Petr Pajer, Meina Neumann-Schaal, Michal Strejcek, Ondrej Uhlik
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Draft Genome Sequence of
Afifella
sp. Strain JA880, Isolated from a Salt Pond
Jagadeeshwari Uppada, Sasikala Chintalapati, Venkata Ramana Chintalapati, J. Cameron Thrash
Microbiology Resource Announcements.2023;[Epub] CrossRef -
Sphingomonas cremea sp. nov., isolated from ginseng soil
Yuna Park, Qingzhen Liu, Soohyun Maeng, Hyejin Oh, Chan-Seok Yun, Hanna Choe, Hyang Burm Lee, Wan-Taek Im
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Marixanthotalea marina gen. nov., sp. nov., a bacterium in the family Flavobacteriaceae isolated from seawater
Zi-Yue Fu, Hua-Peng Xue, Wei He, Guang-Yuan Ma, Ai Hua Zhang, Dao-Feng Zhang, Wen-Jun Li
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Aerococcus agrisoli sp. nov., isolated from paddy soil
Lina Sun, Wen Qiu, Xinhua Gao, Zechao Cheng, Kaihua Huang, Wei Chen
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Bacillus changyiensis sp. nov., isolated from coastal sediment
Guiqian Xiao, Qiliang Lai, Guangyu Li, Shanshan Wang, Yunyong Lin, Zongze Shao, Zhong Hu
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Whole-genome sequencing of a biocontrol Myxococcus xanthus R31 isolate and comparative genomic analysis
Honghong Dong, Ruixiang Gao, Yijie Dong, Qing Yao, Honghui Zhu
Gene.2023; 863: 147286. CrossRef - Comparative biodegradation analysis of three compostable polyesters by a marine microbial community
Ingrid E. Meyer Cifuentes, Julius Degenhardt, Meina Neumann-Schaal, Nico Jehmlich, David Kamanda Ngugi, Başak Öztürk, Ning-Yi Zhou
Applied and Environmental Microbiology.2023;[Epub] CrossRef -
Leucobacter allii sp. nov. and Leucobacter rhizosphaerae sp. nov., isolated from rhizospheres of onion and garlic, respectively
Seunghwan Kim, Tomomi Asano, Hanako Naito, Moriyuki Hamada, Hang-Yeon Weon, Soon-Wo Kwon, Jun Heo
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Microcystis
pangenome reveals cryptic diversity within and across morphospecies
Haiyuan Cai, Christopher J. McLimans, Jessica E. Beyer, Lee R. Krumholz, K. David Hambright
Science Advances.2023;[Epub] CrossRef - Oricola nitratireducens sp. nov., a novel nitrate reducing bacterium isolated from marine sediment in East China Sea
Chaobo Guo, Xinyu Liu, Feilu Xie, Hong Ding, Shan He, Ning Wang, Weiyan Zhang
Antonie van Leeuwenhoek.2023; 116(7): 711. CrossRef -
Runella salmonicolor sp. nov. and Dyella lutea sp. nov., isolated from paddy field soil
Sunho Park, Inhyup Kim, Geeta Chhetri, Yoonseop So, Yonghee Jung, Haejin Woo, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Cellulosimicrobium fucosivorans is a later heterotypic synonym of Cellulosimicrobium composti
Lingmin Jiang, Ho Le Han
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Gymnodinialimonas phycosphaerae sp. nov., a phycosphere bacterium isolated from Karlodinium veneficum
Yuxin Peng, Lingmin Jiang, Yue Jiang, Jiyoon Seo, Doeun Jeon, Young-Min Kim, Zhun Li, Jiyoung Lee
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Larsenimonas rhizosphaerae sp. nov., isolated from a tidal mudflat
Soon Dong Lee, In Seop Kim
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Alcanivorax xiamenensis sp. nov., a novel marine hydrocarbonoclastic bacterium isolated from surface seawater
Qiliang Lai, Xiaoteng Fu, Jianning Wang, Chunming Dong, Liping Wang, Wanpeng Wang, Zongze Shao
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
High-quality full genome assembly of historic
Xylella fastidiosa
strains from ICMP collection using a hybrid sequencing approach
Pragya Kant, Natasha Brohier, Rachel Mann, Luciano Rigano, Robert Taylor, Johanna Wong-Bajracharya, Toni A. Chapman, Monica Kehoe, Rebecca Roach, Brendan Rodoni, Fiona Constable, Vincent Michael Bruno
Microbiology Resource Announcements.2023;[Epub] CrossRef -
Comammox
Nitrospira
and Ammonia-Oxidizing Archaea Are Dominant Ammonia Oxidizers in Sediments of an Acid Mine Lake Containing High Ammonium Concentrations
Deyong Li, Zhichang Ren, Yangqi Zhou, Lugao Jiang, Min Zheng, Guoqiang Liu, Jennifer B. Glass
Applied and Environmental Microbiology.2023;[Epub] CrossRef - Combined Omics Approach Reveals Key Differences between Aerobic and Microaerobic Xylene-Degrading Enrichment Bacterial Communities: Rhodoferax─A Hitherto Unknown Player Emerges from the Microbial Dark Matter
András Táncsics, Sinchan Banerjee, André Soares, Anna Bedics, Balázs Kriszt
Environmental Science & Technology.2023; 57(7): 2846. CrossRef - Sinomonas cellulolyticus sp. nov., isolated from Loktak lake
Lhingjakim L. Khongsai, Jagadeeshwari Uppada, Shabbir Ahamad, Sasikala Chintalapati, Venkata Ramana Chintalapati
Antonie van Leeuwenhoek.2023; 116(12): 1421. CrossRef -
Genomic and metabolic insights into the first host-associated isolate of
Psychrilyobacter
Meijia Liu, Guangshan Wei, Qiliang Lai, Zhaobin Huang, Min Li, Zongze Shao, Konstantinos Aristomenis Kormas, Muhamad Amin, Ruixuan Wang
Microbiology Spectrum.2023;[Epub] CrossRef - Emergence of Raoultella ornithinolytica in human infections from different hospitals in Ecuador with OXA-48-producing resistance
José E. Villacís, Hugo G. Castelán-Sánchez, Jorge Rojas-Vargas, Ulises E. Rodríguez-Cruz, Viviana Albán, Jorge A. Reyes, Pablo M. Meza-Rodríguez, Sonia Dávila-Ramos, Fernando Villavicencio, Margarita Galarza, Monica C. Gestal
Frontiers in Microbiology.2023;[Epub] CrossRef -
Pseudodonghicola flavimaris sp. nov. and Sedimentitalea xiamensis sp. nov., two novel species belonging to the family Roseobacteraceae
Jiamei Huang, Jianning Wang, Guangyu Li, Qiliang Lai, Xuying Zhu, Shanshan Wang, Xiupian Liu, Zongze Shao, Liping Wang
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Phylogeny and structural insights of lipase from Halopseudomonas maritima sp. nov., isolated from sea sand
Ritu Rani Archana Kujur, Manisha Ghosh, Surajit Basak, Subrata K. Das
International Microbiology.2023; 26(4): 1021. CrossRef -
Spirosoma oryzicola sp. nov., isolated from dried rice husk
Miyoung Won, Jun Heo, Hang-Yeon Weon, Daseul Lee, Byeong-Hak Han, Seung-Beom Hong, Soon-Wo Kwon
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Characterization of metagenome-assembled genomes of two endo-archaea of Candida tropicalis
Uppada Jagadeeshwari, Chintalapati Sasikala, Anusha Rai, B. Indu, Sahu Ipsita, Chintalapati Venkata Ramana
Frontiers in Microbiomes.2023;[Epub] CrossRef -
Pontibacterium sinense sp. nov., a nitrate-reducing and thiosulphate-oxidizing bacterium, isolated from coastal sediment
Rui-Ying Chen, Rui-Jie Chen, De-Chen Lu, Ya Gong, Zong-Jun Du
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - UACG: Up-to-Date Archaeal Core Genes and Software for Phylogenomic Tree Reconstruction
Seong-In Na, Michael James Bailey, Mauricio Chalita, Jae Hyoung Cho, Jongsik Chun
Journal of Microbiology.2023; 61(7): 683. CrossRef - Nocardioides pini sp. nov. and Nocardioides pinisoli sp. nov., two novel actinomycetes isolated from Pinus densiflora
Yoonseop So, Geeta Chhetri, Inhyup Kim, Sunho Park, Yonghee Jung, Haejin Woo, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology.2023;[Epub] CrossRef - Lacticaseibacillus huelsenbergensis sp. nov., isolated from grass silage and corn silage
Monika Grabner F., Monika Grabner H., Hermine Schein, Elisabeth Weidenholzer, Tobias Busche, Christian Rückert-Reed, Marlene Buchebner-Jance
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Desulfovibrio mangrovi sp. nov., a sulfate-reducing bacterium isolated from mangrove sediments: a member of the proposed genus “Psychrodesulfovibrio”
Jinjie Zhou, Cui-Jing Zhang, Meng Li
Antonie van Leeuwenhoek.2023; 116(6): 499. CrossRef - Devosia oryzisoli sp. nov., a novel moderately halotolerant bacterium isolated from the roots of rice plants and genome mining revealed the biosynthesis potential as plant growth promoter
Geeta Chhetri, Inhyup Kim, Taegun Seo
Antonie van Leeuwenhoek.2023; 116(3): 231. CrossRef - Phosphorus Removal and Storage Polymer Synthesis by Tetrasphaera-Related Bacteria with Different Carbon Sources
Zhaonian Yu, Shaoyi Xu, Peiliang Wang, Dezhao Liu, Huijie Lu
ACS ES&T Water.2023; 3(5): 1374. CrossRef -
Phycobacter azelaicus gen. nov. sp. nov., a diatom symbiont isolated from the phycosphere of Asterionellopsis glacialis
Lisa S. Y. Coe, Cong Fei, James Weston, Shady A. Amin
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Fluviispira vulneris sp. nov., isolated from human wound secretions
Peijuan Tang, Na Peng, Pengwen Ouyang, Sheng Long, Zhenhua Wei, Xingchun Chen, Pinghua Qu, Liangyi Xie
Antonie van Leeuwenhoek.2023; 116(12): 1305. CrossRef - Revisiting the taxonomy of the genus Rhodopirellula with the proposal for reclassification of the genus to Rhodopirellula sensu stricto, Aporhodopirellula gen. nov., Allorhodopirellula gen. nov. and Neorhodopirellula gen. nov
Pannikurungottu Sreya, Gandham Suresh, Anusha Rai, Biswas Ria, Lakshmanan Vighnesh, Vaibhav Chandrakant Agre, Uppada Jagadeeshwari, Chintalapati Sasikala, Chintalapati Venkata Ramana
Antonie van Leeuwenhoek.2023; 116(3): 243. CrossRef -
Nocardioides cremeus sp. nov., Nocardioides abyssi sp. nov. and Nocardioides oceani sp. nov., three actinobacteria isolated from Western Pacific Ocean sediment
Wenjing Wang, Yihan Ding, Shiping Wei, Miaomiao Yin, Gaiyun Zhang
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Gracilimonas sediminicola sp. nov., a moderately halotolerant bacterium isolated from seaweed sediment collected in the East Sea, Republic of Korea
Yunjeong Lee, Veeraya Weerawongwiwat, Jong-Hwa Kim, Jung-Hoon Yoon, Jung-Sook Lee, Ampaitip Sukhoom, Wonyong Kim
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Peptoniphilus equinus sp. nov., a novel Gram-stain-positive anaerobic coccus isolated from the faeces of a thoroughbred racehorse
Hye Su Jung, Jeong Ui Yun, Mi-Ja Jung, Hye Seon Song, Yeon Bee Kim, Yujin Kim, Joon-Gyu Kim, Che Ok Jeon, Seong Woon Roh, Tae Woong Whon, Se Hee Lee
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Holtiella tumoricola gen. nov. sp. nov., isolated from a human clinical sample
Emma Allen-Vercoe, Michelle C. Daigneault, Sarah J. Vancuren, Kyla Cochrane, Lindsey L. O’Neal, Krithivasan Sankaranarayanan, Paul A. Lawson
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Gimibacter soli gen. nov. sp. nov., isolated from mangrove soil and insight into its ecological distribution and metabolic potential
Yang Liu, Tao Pei, Jiao Duan, Juan Du, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Flavobacterium frigoritolerans sp. nov. and Flavobacterium shii sp. nov., isolated from glaciers on the Tibetan Plateau
Lei-Lei Yang, Hong-Can Liu, Yu-Hua Xin, Qing Liu
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Leucobacter edaphi sp. nov., a highly chromate-tolerant bacterium isolated from chromium containing chemical plant soil
Bijun Zheng, Zhe Xu, Li Yang, Guangyang Jiang, Jia Chen, Yichen Yang, Yongqiang Tian
Antonie van Leeuwenhoek.2023; 116(12): 1433. CrossRef - Nitratireductor luteus sp. nov. isolated from saline-alkali land
Xinping Yang, Liuyan Zhou, Xiaowu Wang, Zhifang Wang, Pengbin Li, Jinping Dai, Huitao Zhang, Yuqing Xie
Antonie van Leeuwenhoek.2023; 116(3): 221. CrossRef -
Melaminivora suipulveris sp. nov., isolated from pigpen dust
Miyoung Won, Jun Heo, Daseul Lee, Byeong-Hak Han, Seung-Beom Hong, Soon-Wo Kwon
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Trinickia violacea sp. nov. and Trinickia terrae sp. nov., isolated from forest soil
Zeng-hong Gao, Xiu-yin Guo, Yi-zhi Liu, Qiu-mei Zhang, Xin-jie Tong, Li-hong Qiu
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Polycladospora coralii gen. nov., sp. nov., a novel member of the family Thermoactinomycetaceae isolated from stony coral in the South China Sea
Kunlian Mo, Huiqin Huang, Lin Ye, Qingjuan Wu, Yong hua Hu
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Comparative genomics and transcriptomics insight into myxobacterial metabolism potentials and multiple predatory strategies
Chunling Wang, Yi Xiao, Yong Wang, Yumin Liu, Qing Yao, Honghui Zhu
Frontiers in Microbiology.2023;[Epub] CrossRef - Acinetobacter thutiue sp. nov. Isolated from Oil-Contaminated Soil in Motorbike Repair Workshops
Nhan Le Thi Tuyet, Jaisoo Kim
Diversity.2023; 15(12): 1179. CrossRef -
Chryseobacterium edaphi sp. nov. and Chryseobacterium gilvum sp. nov., isolated from soil
Yonghee Jung, Geeta Chhetri, Inhyup Kim, Yoonseop So, Sunho Park, Haejin Woo, Ki-Ho Lee, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Ten Novel Species Belonging to the Genus Flavobacterium, Isolated from Freshwater Environments: F. praedii sp. nov., F. marginilacus sp. nov., F. aestivum sp. nov., F. flavigenum sp. nov., F. luteolum sp. nov., F. gelatinilyticum sp. nov., F. aquiphilum s
Hyunyoung Jo, Miri S. Park, Yeonjung Lim, Ilnam Kang, Jang-Cheon Cho
Journal of Microbiology.2023; 61(5): 495. CrossRef - Description of Flavobacterium agricola sp. nov., an auxin producing bacterium isolated from paddy field
Shih-Yao Lin, Asif Hameed, Chia-Fang Tsai, Chiu-Chung Young
Antonie van Leeuwenhoek.2023; 116(12): 1345. CrossRef - Blastopirellula sediminis sp. nov. a new member of Pirellulaceae isolated from the Andaman and Nicobar Islands
P. K. Sreya, Kumar Gaurav, Shabbir Ahmed, Chintalapati Sasikala, Chintalapati Venkata Ramana
Antonie van Leeuwenhoek.2023; 116(5): 463. CrossRef - Macromonas nakdongensis sp. nov., Isolated from Freshwater and Characterization of Bacteriophage BK-30P—The First Phage That Infects Genus Macromonas
Kiwoon Baek, Ahyoung Choi
Microorganisms.2023; 11(9): 2237. CrossRef -
Sphingomonas lycopersici sp. nov., isolated from tomato rhizosphere soil
Ruixiang Gao, Honghong Dong, Yang Liu, Qing Yao, Huaping Li, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Staphylococcus brunensis
sp. nov. isolated from human clinical specimens with a staphylococcal cassette chromosome-related genomic island outside of the
rlmH
gene bearing the
ccrDE
r
Vojtěch Kovařovic, Adéla Finstrlová, Ivo Sedláček, Petr Petráš, Pavel Švec, Ivana Mašlaňová, Meina Neumann-Schaal, Ondrej Šedo, Tibor Botka, Eva Staňková, Jiří Doškař, Roman Pantůček, Shannon D. Manning
Microbiology Spectrum.2023;[Epub] CrossRef - The Raphidiopsis (= Cylindrospermopsis) raciborskii pangenome updated: Two new metagenome-assembled genomes from the South American clade
Marcele Laux, Carlos Morais Piroupo, João Carlos Setubal, Alessandra Giani
Harmful Algae.2023; 129: 102518. CrossRef -
Marivirga aurantiaca sp. nov., a halophilic nitrite-reducing bacterium, isolated from intertidal surface sediments
Mingxia Zhang, Yulian Zhang, Qing Yao, Fan Yang, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Agromyces chromiiresistens sp. nov., Novosphingobium album sp. nov., Sphingobium arseniciresistens sp. nov., Sphingomonas pollutisoli sp. nov., and Salinibacterium metalliresistens sp. nov.: five new members of Microbacteriaceae and Sphingomonadaceae from
Ze-Shen Liu, Ke-Huan Wang, Man Cai, Mei-Ling Yang, Xiao-Kang Wang, Hong-Lin Ma, Yi-Han Yuan, Lin-Huan Wu, De-Feng Li, Shuang-Jiang Liu
Frontiers in Microbiology.2023;[Epub] CrossRef -
Sphingomonas oryzagri sp. nov., isolated from a rice field
Md. Amdadul Huq, Sun-Young Lee, Md. Shahedur Rahman, Shahina Akter
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Tsuneonella litorea sp. nov., a novel carotenoid-producing bacterium isolated from coastal sediment
Yizhou He, Yang Liu, Tao Pei, Jiao Duan, Juan Du, Xiaoqin Deng, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Gramella oceanisediminis sp. nov., isolated from deep-sea sediment of the Indian Ocean
Lin Yang, Haolei Shi, Qian Li, Minggang Zheng, Qiliang Lai, Li Zheng
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Pseudomonas petrae sp. nov. isolated from regolith samples in Antarctica
Dana Nováková, Vendula Koublová, Karel Sedlář, Eva Staňková, Stanislava Králová, Pavel Švec, Meina Neumann-Schaal, Jacqueline Wolf, Sylva Koudelková, Miloš Barták, Ivo Sedláček
Systematic and Applied Microbiology.2023; 46(4): 126424. CrossRef -
Paraflavisolibacter caeni gen. nov., sp. nov., a novel taxon within the family Chitinophagaceae isolated from sludge
Cansheng Yuan, Bin Liu, Lin Wang, Weihua Long, Zhuang Ke, Jian He
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Shimia ponticola sp. nov., an aerobic anoxygenic photoheterotrophic bacterium, isolated from surface seawater in the South China Sea
Qi Chen, Bowen He, Ta-Hui Lin, Nianzhi Jiao, Qiang Zheng
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - From sequences to species: Charting the phytoplasma classification and taxonomy in the era of taxogenomics
Kiran Kirdat, Bhavesh Tiwarekar, Shivaji Sathe, Amit Yadav
Frontiers in Microbiology.2023;[Epub] CrossRef -
Thermobacterium salinum gen. nov., sp. nov., a novel member of the family Flavobacteriaceae isolated from a hydrothermal zone
Beihan Chen, Haichen Zhang, Dan Lin, Jianing Ye, Kai Tang
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Phenotypic and Genomic Characterization of Streptomyces pakalii sp. nov., a Novel Species with Anti-Biofilm and Anti-Quorum Sensing Activity in ESKAPE Bacteria
Michelle Chávez-Hernández, Jossue Ortiz-Álvarez, Jesús Morales-Jiménez, Lourdes Villa-Tanaca, César Hernández-Rodríguez
Microorganisms.2023; 11(10): 2551. CrossRef -
Dyella humicola sp. nov., Dyella subtropica sp. nov., Dyella silvatica sp. nov. and Dyella silvae sp. nov., isolated from subtropical forest soil
Guang-Da Feng, Xiaoqin Deng, Jiali Li, Wendi Chen, Xianjiao Zhang, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Hufsiella ginkgonis gen. nov., sp. nov. and Hufsiella arboris sp. nov., isolated from tree barks
Heeyoung Kang, Seokhyeon Bae, Haneul Kim, Kiseong Joh
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Description ofDefluviimonas salinarumsp. nov. with the potential of benzene-degradation isolated from saltern in the Yellow Seacoast
Yunjeong Lee, Jong-Hwa Kim, Jung-Hoon Yoon, Jung-Sook Lee, Ampaitip Sukhoom, Wonyong Kim
FEMS Microbiology Letters.2023;[Epub] CrossRef - Genomic potential for inorganic carbon sequestration and xenobiotic degradation in marine bacterium Youngimonas vesicularis CC-AMW-ET affiliated to family Paracoccaceae
Asif Hameed, Kokkarambath Vannadil Suchithra, Shih-Yao Lin, Paul Stothard, Chiu-Chung Young
Antonie van Leeuwenhoek.2023; 116(11): 1247. CrossRef - Polyphasic Characterization and Genomic Insights into an Aerobic Denitrifying Bacterium, Shewanella zhuhaiensis sp. nov., Isolated from a Tidal Flat Sediment
Yang Liu, Tao Pei, Juan Du, Honghui Zhu
Microorganisms.2023; 11(12): 2870. CrossRef -
Pseudomonas quebecensis sp. nov., a bacterium isolated from root-zone soil of a native legume, Amphicarpaea bracteata (L.) Fernald, in Quebec, Canada
James T. Tambong, Renlin Xu, Sylvia I. Chi, Isabelle Birugu, Sylvia Bachelet, Conrad Hutter, Marc-Olivier Duceppe, Stephan Brière
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Taxogenomics of Alkalihalobacterium chitinilyticum sp. nov.: an alkaliphilic chitin degrading bacterial strain isolated from Lonar Lake, India, with potential biotechnological applications
Sonia Thite, Kamakshi Tarwadge, Purva Mengade, Tushar Lodha, Neetha Joseph, Lucky Thakkar, Amaraja Joshi
Antonie van Leeuwenhoek.2023; 116(11): 1103. CrossRef - Characterization of two novel chemolithoautotrophic bacteria of Sulfurovum from marine coastal environments and further comparative genomic analyses revealed species differentiation among deep-sea hydrothermal vent and non-vent origins
Jun Wang, Qiang Zheng, Shasha Wang, Jialing Zeng, Qing Yuan, Yangsheng Zhong, Lijing Jiang, Zongze Shao
Frontiers in Marine Science.2023;[Epub] CrossRef - Pseudomonas citri sp. nov., a potential novel plant growth promoting bacterium isolated from rhizosphere soil of citrus
Hong Gao, Guang-Da Feng, Zengwei Feng, Qing Yao, Jiali Li, Xiaoqin Deng, Xiaoran Li, Honghui Zhu
Antonie van Leeuwenhoek.2023; 116(3): 281. CrossRef -
Pontibacter liquoris sp. nov. and Pontibacter vulgaris sp. nov., two novel bacteria isolated from the pit mud of Chinese liquor
Chaobo Guo, Haohao Wang, Xinyu Liu, Yifan Guo, Shan He, Lijian Ding, Weiyan Zhang
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Pseudophaeobacter profundi sp. nov., isolated from the Western Pacific Ocean
Xuying Zhu, Liping Wang, Qiliang Lai, Jianning Wang, Jiamei Huang, Guangyu Li, Lingyu Zeng, Jingyu Xia, Zongze Shao
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Physiological and genomic analyses of cobalamin (vitamin B12)-auxotrophy of Lysobacter auxotrophicus sp. nov., a methionine-auxotrophic chitinolytic bacterium isolated from chitin-treated soil
Akihiro Saito, Hideo Dohra, Moriyuki Hamada, Ryota Moriuchi, Yohei Kotsuchibashi, Koji Mori
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Hyperactive nanobacteria with host-dependent traits pervade Omnitrophota
Cale O. Seymour, Marike Palmer, Eric D. Becraft, Ramunas Stepanauskas, Ariel D. Friel, Frederik Schulz, Tanja Woyke, Emiley Eloe-Fadrosh, Dengxun Lai, Jian-Yu Jiao, Zheng-Shuang Hua, Lan Liu, Zheng-Han Lian, Wen-Jun Li, Maria Chuvochina, Brianna K. Finley
Nature Microbiology.2023; 8(4): 727. CrossRef - Genome-resolved metagenomics provides insights into the microbial-mediated sulfur and nitrogen cycling in temperate seagrass meadows
Pengyuan Liu, Songbao Zou, Haikun Zhang, Qing Liu, Zenglei Song, Yanyan Huang, Xiaoke Hu
Frontiers in Marine Science.2023;[Epub] CrossRef - ComammoxNitrospirabacteria outnumber canonical nitrifiers irrespective of electron donor mode and availability in biofiltration systems
Katherine J Vilardi, Irmarie Cotto, Maria Sevillano, Zihan Dai, Christopher L Anderson, Ameet Pinto
FEMS Microbiology Ecology.2022;[Epub] CrossRef - Glycoside hydrolase subfamily GH5_57 features a highly redesigned catalytic interface to process complex hetero-β-mannans
Marcele P. Martins, Mariana A. B. Morais, Gabriela F. Persinoti, Rafael H. Galinari, Li Yu, Yoshihisa Yoshimi, Fernanda B. Passos Nunes, Tatiani B. Lima, Shayla F. Barbieri, Joana L. M. Silveira, Vincent Lombard, Nicolas Terrapon, Paul Dupree, Bernard Hen
Acta Crystallographica Section D Structural Biology.2022; 78(11): 1358. CrossRef - Alexandriicola marinus gen. nov., sp. nov., a new member of the family Rhodobacteraceae isolated from marine phycosphere
Wen-Zhuo Zhu, Hui-Min Gao, Ya-Ming Ge, Jun Dai, Xi Yang, Xiao-Ling Zhang, Qiao Yang
Antonie van Leeuwenhoek.2022; 115(4): 473. CrossRef - In silico, in vitro and in vivo safety evaluation of Limosilactobacillus reuteri strains ATCC PTA-126787 & ATCC PTA-126788 for potential probiotic applications
Dharanesh Gangaiah, Shrinivasrao P. Mane, Nilesh R. Tawari, Nallakannu Lakshmanan, Valerie Ryan, Alyssa Volland, Dwi Susanti, Milind Patel, Abraham Abouzeid, Emily B. Helmes, Arvind Kumar, Konstantinos Papadimitriou
PLOS ONE.2022; 17(1): e0262663. CrossRef -
Alicyclobacillus curvatus sp. nov. and Alicyclobacillus mengziensis sp. nov., two acidophilic bacteria isolated from acid mine drainage
Zhen Jiang, Dildar Wu, Zong-Lin Liang, Xiu-Tong Li, Ye Huang, Nan Zhou, Zheng-Hua Liu, Guang-Ji Zhang, Yan Jia, Hua-Qun Yin, Shuang-Jiang Liu, Cheng-Ying Jiang
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Genome-based taxonomic classification of the closest-to-Comamonadaceae group supports a new family Sphaerotilaceae fam. nov. and taxonomic revisions
Yang Liu, Juan Du, Tao Pei, Hanqin Du, Guang-Da Feng, Honghui Zhu
Systematic and Applied Microbiology.2022; 45(6): 126352. CrossRef -
Paraphocaeicola brunensis
gen. nov., sp. nov., Carrying Two Variants of
nimB
Resistance Gene from Bacteroides fragilis, and
Caecibacteroides pullorum
gen. nov., sp. nov., Two Novel G
Stanislava Kralova, Lenka Davidova-Gerzova, Adam Valcek, Matej Bezdicek, Ivan Rychlik, Veronika Rezacova, Alois Cizek, Jeffrey A. Gralnick
Microbiology Spectrum.2022;[Epub] CrossRef - Antrihabitans stalagmiti sp. nov., isolated from a larva cave and a proposal to transfer Rhodococcus cavernicola Lee et al. 2020 to a new genus Spelaeibacter as Spelaeibacter cavernicola gen. nov. comb. nov
Sung-Min Kim, Soon Dong Lee, Young Sang Koh, In Seop Kim
Antonie van Leeuwenhoek.2022; 115(4): 521. CrossRef - Sphingopyxis lutea sp. nov., a novel moderately halotolerant bacterium isolated from pebbles
Geeta Chhetri, Inhyup Kim, Taegun Seo
Archives of Microbiology.2022;[Epub] CrossRef -
Nocardioides nematodiphilus sp. nov., isolated from rhizosphere of Arabidopsis thaliana
Xue-Mei Zhang, Wan-Ting Mo, Yu-Qian Wei, Xin Li, Gui-Mei Ma, Yu-Sen Yang, Xue-Jian Wang, Jian-Jin Liu, Zi-Yi Liu, Xing-Kui Zhou, Ti-Kun Zhang
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Sedimentimonas flavescens gen. nov., sp. nov., isolated from sediment of Clam Island, Liaoning Province
Lulu Mu, Xueping Zhang, Yanfeng Zhang, Zemin Fang, Yazhong Xiao
Antonie van Leeuwenhoek.2022; 115(8): 979. CrossRef - Pseudomonas oligotrophica sp. nov., a Novel Denitrifying Bacterium Possessing Nitrogen Removal Capability Under Low Carbon–Nitrogen Ratio Condition
Mingxia Zhang, Anzhang Li, Qing Yao, Botao Xiao, Honghui Zhu
Frontiers in Microbiology.2022;[Epub] CrossRef - Panacibacter microcysteis sp. nov., isolated from a eutrophic reservoir during the Microcystis bloom period
Ve Van Le, So-Ra Ko, Mingyeong Kang, Sang-Ah Lee, Hee-Mock Oh, Chi-Yong Ahn
Archives of Microbiology.2022;[Epub] CrossRef - Ruegeria alba sp. nov., Isolated from a Tidal Flat Sediment
Juan Du, Yang Liu, Tao Pei, Anzhang Li, Honghui Zhu
Current Microbiology.2022;[Epub] CrossRef - Larkinella humicola sp. nov., a gamma radiation-resistant bacterium isolated from soil
Yuna Park, Leonid N. Ten, Young Koung Lee, Hee‑Young Jung, Myung Kyum Kim
Archives of Microbiology.2022;[Epub] CrossRef - Oral and gut dysbiosis leads to functional alterations in Parkinson’s disease
Sungyang Jo, Woorim Kang, Yun Su Hwang, Seung Hyun Lee, Kye Won Park, Mi Sun Kim, Hyunna Lee, Hyung Jeong Yoon, Yoo Kyoung Park, Mauricio Chalita, Je Hee Lee, Hojun Sung, Jae-Yun Lee, Jin-Woo Bae, Sun Ju Chung
npj Parkinson's Disease.2022;[Epub] CrossRef -
Colwellia maritima sp. nov. and Polaribacter marinus sp. nov., isolated from seawater
Sylvia Kristyanto, Jaejoon Jung, Jeong Min Kim, Keunpil Kim, Mi-hwa Lee, Lujiang Hao, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Hymenobacter translucens sp. nov. and Hymenobacter pini sp. nov. isolated from soil
Minji Bang, Myung Kyum Kim, Hee‑Young Jung
Archives of Microbiology.2022;[Epub] CrossRef -
Chryseobacterium subflavum sp. nov., isolated from soil
Delong Kong, Yan Wang, Qingqing Li, Yanzheng Zhou, Xu Jiang, Zhen Xing, Zhiye Wang, Zhiyong Ruan
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
Acetobacter vaccinii sp. nov., a novel acetic acid bacterium isolated from blueberry fruit (Vaccinium corymbosum L.)
Jun Heo, Atena Sadat Sombolestani, David Laureys, Jessika De Clippeleer, Miyoung Won, Peter Vandamme, Soon-Wo Kwon
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Neotabrizicola shimadae gen. nov., sp. nov., an aerobic anoxygenic phototrophic bacterium harbouring photosynthetic genes in the family Rhodobacteraceae, isolated from a terrestrial hot spring
So Muramatsu, Setsuko Hirose, Takao Iino, Moriya Ohkuma, Satoshi Hanada, Shin Haruta
Antonie van Leeuwenhoek.2022; 115(6): 731. CrossRef -
Pedomonas mirosovicensis gen. nov., sp. nov., a bacterium isolated from soil with the aid of Micrococcus luteus culture supernatant containing resuscitation-promoting factor
Marco A. Lopez Marin, Jachym Suman, Kunal Jani, Pavel Ulbrich, Tomas Cajthaml, Petr Pajer, Jacqueline Wolf, Meina Neumann-Schaal, Michal Strejcek, Ondrej Uhlik
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
Streptococcus
oriscaviae
sp. nov. Infection Associated with Guinea Pigs
Jade L. L. Teng, Yuanchao Ma, Jonathan H. K. Chen, Ruibang Luo, Chuen-Hing Foo, Tsz Tuen Li, Jordan Y. H. Fong, Weiming Yao, Samson S. Y. Wong, Kitty S. C. Fung, Susanna K. P. Lau, Patrick C. Y. Woo, Jasna Kovac
Microbiology Spectrum.2022;[Epub] CrossRef -
Paracidobacterium acidisoli gen. nov., sp. nov. and Alloacidobacterium dinghuense gen. nov., sp. nov., two acidobacteria isolated from forest soil, and reclassification of Acidobacterium ailaaui and Acidipila dinghuensis as Pseudacidobacteriu
Qiu-mei Zhang, Jia-cheng Fu, Zhi-qin Chen, Li-hong Qiu
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Non‐ribosomal peptide biosynthetic potential of the nematode symbiont Photorhabdus
Ao‐Qi Du, Ti‐Ti Ying, Zhen‐Yi Zhou, Wen‐Chao Yu, Gang‐Ao Hu, Xian Luo, Man‐Jing Ma, Yan‐Lei Yu, Hong Wang, Bin Wei
Environmental Microbiology Reports.2022; 14(6): 917. CrossRef -
Chryseobacterium oryzae sp. nov. and Chryseobacterium suipulveris sp. nov., isolated from Andong sikhye and pigpen dust, respectively
Jun Heo, Miyoung Won, Daseul Lee, Jeong-Seon Kim, Byeong-Hak Han, Soo-Jin Kim, Seung-Beom Hong, Soon-Wo Kwon
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Metagenomic evidence of a novel family of anammox bacteria in a subsea environment
Carolina Suarez, Paula Dalcin Martins, Mike S.M. Jetten, Sabina Karačić, Britt Marie Wilén, Oskar Modin, Per Hagelia, Malte Hermansson, Frank Persson
Environmental Microbiology.2022; 24(5): 2348. CrossRef - Evolutionary Principles of Bacterial Signaling Capacity and Complexity
Ran Mo, Yugeng Liu, Yuanyuan Chen, Yingjin Mao, Beile Gao, Qijing Zhang
mBio.2022;[Epub] CrossRef - Pseudomonas phenolilytica sp. nov., a novel phenol-degrading bacterium
Ritu Rani Archana Kujur, Subrata K. Das
Archives of Microbiology.2022;[Epub] CrossRef -
Pontibacter pamirensis sp. nov., isolated from saline-alkaline soil
Fang Liu, Yang-Yang Liu, Yu-Qian Li, Rui-Feng Lei, Qin Ma, Dilireba Abudourousuli, Zulihumaer Rouzi, Muyesaier Aosiman, Deng-Di An, Wen-Jun Li
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
Limosilactobacillus reuteri
DS0384 promotes intestinal epithelial maturation via the postbiotic effect in human intestinal organoids and infant mice
Hana Lee, Kwang Bo Jung, Ohman Kwon, Ye Seul Son, Eunho Choi, Won Dong Yu, Naeun Son, Jun Hyoung Jeon, Hana Jo, Haneol Yang, Yeong Rak Son, Chan-Seok Yun, Hyun-Soo Cho, Sang Kyu Kim, Dae-Soo Kim, Doo-Sang Park, Mi-Young Son
Gut Microbes.2022;[Epub] CrossRef - Some like it cold: the cellular organization and physiological limits of cold‐tolerant nitrite‐oxidizing Nitrotoga
Sabine Keuter, Hanna Koch, Katharina Sass, Simone Wegen, Natuschka Lee, Sebastian Lücker, Eva Spieck
Environmental Microbiology.2022; 24(4): 2059. CrossRef - Horticoccus luteus gen. nov., sp. nov., A Novel Member of the Phylum Verrucomicrobia Isolated from a Dichlorodiphenyltrichloroethane (DDT)-Contaminated Orchard Soil
Joon-hui Chung, Ja-Yeon Lee, Geun-Hyung Choi, Miyoung Won, Jehyeong Yeon, Younggun Yoon, Si-Hyun An, Da-Yeon Kim, InCheol Park, Ye-eun Kim, Jae-Hyung Ahn
Current Microbiology.2022;[Epub] CrossRef - Burkholderia orbicola sp. nov., a novel species within the Burkholderia cepacia complex
Leslie-Mariana Morales-Ruíz, Mariana Rodríguez-Cisneros, Jeniffer-Chris Kerber-Díaz, Fernando-Uriel Rojas-Rojas, J. Antonio Ibarra, Paulina Estrada-de los Santos
Archives of Microbiology.2022;[Epub] CrossRef - Assessing the utility of mitochondrial gene markers in the family Suessiaceae (Dinophyta) with phylogenomic validation
Se Hyeon Jang, Seong In Na, Moo Joon Lee, Yeong Du Yoo
Molecular Phylogenetics and Evolution.2022; 177: 107625. CrossRef - Taxonomic and Bioactivity Characterizations of Mameliella alba Strain LZ-28 Isolated from Highly Toxic Marine Dinoflagellate Alexandrium catenella LZT09
Cheng-Zhe Ren, Hui-Min Gao, Jun Dai, Wen-Zhuo Zhu, Fei-Fei Xu, Yun Ye, Xiao-Ling Zhang, Qiao Yang
Marine Drugs.2022; 20(5): 321. CrossRef -
Nocardioides panacis sp. nov., isolated from soil of a ginseng field
Yuna Park, Qingzhen Liu, Soohyun Maeng, Won Jung Choi, Yoonjee Chang, Wan-Taek Im
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Water quality drives the distribution of freshwater cable bacteria
Meijun Dong, Shan Yang, Xunan Yang, Meiying Xu, Wenzhe Hu, Bin Wang, Youda Huang, Jiarou Xu, Huibin Lu, Yonggang Yang, Xingjuan Chen, Haobin Huang, Guoping Sun
Science of The Total Environment.2022; 841: 156468. CrossRef -
Vibrio ostreae sp. nov., a novel gut bacterium isolated from a Yellow Sea oyster
Neak Muhammad, Tra T.H. Nguyen, Yong-Jae Lee, Jaeho Ko, Forbes Avila, Song-Gun Kim
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
Flavobacterium endoglycinae sp. nov., an endophytic bacterium isolated from soybean (Glycine max L. cv. Gwangan) stems
Jiyoon Seo, Yuxin Peng, Lingmin Jiang, Sang-Beom Lee, Rae-Dong Jeong, Soon Ju Park, Cha Young Kim, Man-Soo Choi, Jiyoung Lee
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Draft Genome Sequence of Methanobacterium paludis IBT-C12, Recovered from Sediments of the Apatlaco River, Mexico
Erick Alejandro Sánchez-Salazar, Lizbeth Hernández-Jaimes, Luz Breton-Deval, Ayixon Sánchez-Reyes, Frank J. Stewart
Microbiology Resource Announcements.2022;[Epub] CrossRef - Successful Direct Whole Genome Sequencing and Revivification of Freeze-Dried Nontuberculous Mycobacteria after More than Half a Century of Storage
Xenia Emilie Sinding Iversen, Anders Norman, Dorte Bek Folkvardsen, Erik Svensson, Erik Michael Rasmussen, Troels Lillebaek, Sébastien P. Faucher
Microbiology Spectrum.2022;[Epub] CrossRef - Bacterial filamentation as a mechanism for cell-to-cell spread within an animal host
Tuan D. Tran, Munira Aman Ali, Davin Lee, Marie-Anne Félix, Robert J. Luallen
Nature Communications.2022;[Epub] CrossRef - Greater functional diversity and redundancy of coral endolithic microbiomes align with lower coral bleaching susceptibility
Anny Cárdenas, Jean-Baptiste Raina, Claudia Pogoreutz, Nils Rädecker, Jeremy Bougoure, Paul Guagliardo, Mathieu Pernice, Christian R Voolstra
The ISME Journal.2022; 16(10): 2406. CrossRef - Comparative Genomics Reveal the Animal-Associated Features of the Acanthopleuribacteraceae Bacteria, and Description of Sulfidibacter corallicola gen. nov., sp., nov.
Guanghua Wang, Yuanjin Li, Jianfeng Liu, Biao Chen, Hongfei Su, Jiayuan Liang, Wen Huang, Kefu Yu
Frontiers in Microbiology.2022;[Epub] CrossRef - Dyella sedimenti sp. nov., Isolated from the Sediment of a Winery
Li Gao, Yuan-Dong Li, Xing-Kui Zhou, Xiu-Ming Liu, Hui-Tian Li, Wen-Jun Li, Yan-Qing Duan
Current Microbiology.2022;[Epub] CrossRef - Arenibacterium arenosum sp. nov., isolated from sea sand
Jiseon Jeong, Veeraya Weerawongwiwat, Jong-Hwa Kim, Min Kuk Suh, Han Sol Kim, Jung-Sook Lee, Jung-Hoon Yoon, Ampaitip Sukhoom, Wonyong Kim
Archives of Microbiology.2022;[Epub] CrossRef -
Gordonia pseudamarae sp. nov., a home for novel actinobacteria isolated from stable foams on activated sludge wastewater treatment plants
Raúl Riesco, Jayson J. A. Rose, Steven Batinovic, Steve Petrovski, Fernando Sánchez-Juanes, Robert J. Seviour, Michael Goodfellow, Martha E. Trujillo
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Predicting butyrate- and propionate-forming bacteria of gut microbiota from sequencing data
Berenike Kircher, Sabrina Woltemate, Frank Gutzki, Dirk Schlüter, Robert Geffers, Heike Bähre, Marius Vital
Gut Microbes.2022;[Epub] CrossRef - Kaistella soli sp. nov., isolated from oil-contaminated experimental soil
Dhiraj Kumar Chaudhary, Ram Hari Dahal, Joung-Ho Park, Yongseok Hong
Archives of Microbiology.2022;[Epub] CrossRef - Halomonas salinarum sp. nov., a moderately halophilic bacterium isolated from saline soil in Yingkou, China
Ya-Lin Yin, Fang-Ling Li, Lei Wang
Archives of Microbiology.2022;[Epub] CrossRef - Neoroseomonas marina sp. nov., Isolated from a Beach Sand
Anusha Rai, Jagadeeshwari Uppada, Deepshikha Gupta, Smita Nandardhane, Ipsita Sahu, Sasikala Chintalapati, Venkata Ramana Chintalapati
Current Microbiology.2022;[Epub] CrossRef - Paenibacillus albicereus sp. nov. and Niallia alba sp. nov., isolated from digestive syrup
Vipool Thorat, Kiran Kirdat, Bhavesh Tiwarekar, Priyanka Dhanavade, Prachi Karodi, Yogesh Shouche, Shivaji Sathe, Tushar Lodha, Amit Yadav
Archives of Microbiology.2022;[Epub] CrossRef - Identification of Mucilaginibacter conchicola sp. nov., Mucilaginibacter achroorhodeus sp. nov. and Mucilaginibacter pallidiroseus sp. nov. and emended description of the genus Mucilaginibacter
Jiyoun Kim, Byungjo Lee, Geeta Chhetri, Inhyup Kim, Yoonseop So, Wonhee Jang, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Pusillimonas faecipullorum sp. nov., isolated from the poultry manure
Shih-Yao Lin, Asif Hameed, Chia-Fang Tsai, Yu-Shan Tang, Chiu-Chung Young
Archives of Microbiology.2022;[Epub] CrossRef - Unveiling the genomic potential of Pseudomonas type strains for discovering new natural products
Zaki Saati-Santamaría, Nelly Selem-Mojica, Ezequiel Peral-Aranega, Raúl Rivas, Paula García-Fraile
Microbial Genomics
.2022;[Epub] CrossRef - A genomic overview including polyphasic taxonomy of Thalassoroseus pseudoceratinae gen. nov., sp. nov. isolated from a marine sponge, Pseudoceratina sp.
Gaurav Kumar, Uppada Jagadeeshwari, Pannikurungottu Sreya, Ahmed Shabbir, Chintalapati Sasikala, Chintalapati Venkata Ramana
Antonie van Leeuwenhoek.2022; 115(7): 843. CrossRef -
Novosphingobium percolationis sp. nov. and Novosphingobium huizhouense sp. nov., isolated from landfill leachate of a domestic waste treatment plant
Xiaoling He, Huibin Lu, Wenzhe Hu, Tongchu Deng, Xiaofan Gong, Xunan Yang, Da Song, Mei He, Meiying Xu
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Development of a Novel Real-Time Polymerase Chain Reaction Assay to DetectEscherichia albertiiin Chicken Meat
Sakura Arai, Tadasuke Ooka, Mizuha Shibata, Yuhki Nagai, Yuki Tokoi, Hiromi Nagaoka, Rika Maeda, Akihiko Tsuchiya, Yuka Kojima, Kenji Ohya, Takahiro Ohnishi, Noriko Konishi, Kayoko Ohtsuka, Yukiko Hara-Kudo
Foodborne Pathogens and Disease.2022; 19(12): 823. CrossRef -
Psychroflexus curvus sp. nov., Psychroflexus longus sp. nov. and Psychroflexus montanilacus sp. nov., isolated from salt lakes on the Tibetan Plateau
Huibin Lu, Peixin Gao, Dorji Phurbu, Qinglong Wu, Peng Xing
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
Tumebacillus amylolyticus sp. nov., isolated from garden soil in Korea
Minchung Kang, Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Yoonseop So, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Description of Polaribacter batillariae sp. nov., Polaribacter cellanae sp. nov., and Polaribacter pectinis sp. nov., novel bacteria isolated from the gut of three types of South Korean shellfish
Su-Won Jeong, Jeong Eun Han, June-Young Lee, Ji-Ho Yoo, Do-Yeon Kim, In Chul Jeong, Jee-Won Choi, Yun-Seok Jeong, Jae-Yun Lee, So-Yeon Lee, Euon Jung Tak, Hojun Sung, Hyun Sik Kim, Pil Soo Kim, Dong-Wook Hyun, Jin-Woo Bae
Journal of Microbiology.2022; 60(6): 576. CrossRef - Survival strategy of comammox bacteria in a wastewater nutrient removal system with sludge fermentation liquid as additional carbon source
Shaoyi Xu, Wenbo Chai, Rui Xiao, Barth F. Smets, Alejandro Palomo, Huijie Lu
Science of The Total Environment.2022; 802: 149862. CrossRef -
Hymenobacter armeniacus sp. nov. and Hymenobacter montanus sp. nov., two radiation-resistant bacteria from soil
Yuna Park, Yoonjee Chang, Myung Kyum Kim
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Hymenobacter telluris sp. nov., isolated from soil in South Korea
Tuvshinzaya Damdintogtokh, Yuna Park, Soohyun Maeng, Hye Jin Oh, Minji Bang, Young Koung Lee, Jaesung Oh, Jaewoo Bai, Myung Kyum Kim
Archives of Microbiology.2022;[Epub] CrossRef -
Ferruginibacter albus sp. nov., isolated from a mountain soil, and Mucilaginibacter robiniae sp. nov., isolated from a black locust flower, Robinia pseudoacacia
Miyoung Won, Hang-Yeon Weon, Jun Heo, Daseul Lee, Byeong-Hak Han, Seung-Beom Hong, Soon-Wo Kwon
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Beyond the ABCs—Discovery of Three New Plasmid Types in Rhodobacterales (RepQ, RepY, RepW)
Heike M. Freese, Victoria Ringel, Jörg Overmann, Jörn Petersen
Microorganisms.2022; 10(4): 738. CrossRef - Comparative Genomic Analyses of the Genus Photobacterium Illuminate Biosynthetic Gene Clusters Associated with Antagonism
Nyok-Sean Lau, Wooi Liang Heng, Noorizan Miswan, Nor Azura Azami, Go Furusawa
International Journal of Molecular Sciences.2022; 23(17): 9712. CrossRef - Comparative Genomic Analysis of Fusobacterium necrophorum Provides Insights into Conserved Virulence Genes
Prabha K. Bista, Deepti Pillai, Chayan Roy, Joy Scaria, Sanjeev K. Narayanan, Philip N. Rather
Microbiology Spectrum.2022;[Epub] CrossRef - Shewanella sp. T2.3D-1.1 a Novel Microorganism Sustaining the Iron Cycle in the Deep Subsurface of the Iberian Pyrite Belt
Guillermo Mateos, Adrián Martínez Bonilla, Sofía de Francisco de Polanco, José M. Martínez, Cristina Escudero, Nuria Rodríguez, Irene Sánchez-Andrea, Ricardo Amils
Microorganisms.2022; 10(8): 1585. CrossRef - Devosia rhizoryzae sp. nov., and Devosia oryziradicis sp. nov., novel plant growth promoting members of the genus Devosia, isolated from the rhizosphere of rice plants
Geeta Chhetri, Inhyup Kim, Minchung Kang, Jiyoun Kim, Yoonseop So, Taegun Seo
Journal of Microbiology.2022; 60(1): 1. CrossRef - Nocardioides carbamazepini sp. nov., an ibuprofen degrader isolated from a biofilm bacterial community enriched on carbamazepine
Tibor Benedek, Márton Pápai, Kholood Gharieb, Anna Bedics, András Táncsics, Erika Tóth, Hussein Daood, Gergely Maróti, Roland Wirth, Ofir Menashe, Károly Bóka, Balázs Kriszt
Systematic and Applied Microbiology.2022; 45(4): 126339. CrossRef -
Agrilactobacillus fermenti sp. nov. isolated from fermented vegetable residue
Shih-Yao Lin, Asif Hameed, Chia-Fang Tsai, Mei-Hua Hung, Chiu-Chung Young
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Genomic Insights into the Radiation-Resistant Capability of Sphingomonas qomolangmaensis S5-59T and Sphingomonas glaciei S8-45T, Two Novel Bacteria from the North Slope of Mount Everest
Yang Liu, Xiaowen Cui, Ruiqi Yang, Yiyang Zhang, Yeteng Xu, Guangxiu Liu, Binglin Zhang, Jinxiu Wang, Xinyue Wang, Wei Zhang, Tuo Chen, Gaosen Zhang
Microorganisms.2022; 10(10): 2037. CrossRef - In silico, in vitro and in vivo characterization of host-associated Latilactobacillus curvatus strains for potential probiotic applications in farmed Atlantic salmon (Salmo salar)
Hannah S. Cathers, Shrinivasrao P. Mane, Nilesh R. Tawari, Jayanth Balakuntla, Germán Plata, Madan Krishnamurthy, Alicia MacDonald, Marilyn Wolter, Niel Baxter, Julian Briones, Akshitha Nagireddy, Gregory Millman, Roberto E. Martin, Arvind Kumar, Dharanes
Scientific Reports.2022;[Epub] CrossRef - Rahnella sikkimica sp. nov., a novel cold-tolerant bacterium isolated from the glacier of Sikkim Himalaya with plant growth-promoting properties
Anil Kumar, Anne Le Flèche-Matéos, Rakshak Kumar, Fabienne Lomprez, Frédéric Fichenick, Dharam Singh, Patrick A. D. Grimont, Sanjay Kumar
Extremophiles.2022;[Epub] CrossRef - Hydrogenophaga crocea sp. nov. associated with cyanobacterial mat isolated from farmland mud
Vipool Thorat, Bhavesh Tiwarekar, Kiran Kirdat, Saurabhee Chavan, Shital Markad, Shivaji Sathe, Tushar Lodha, Amit Yadav
Archives of Microbiology.2022;[Epub] CrossRef - Genome mining revealed polyhydroxybutyrate biosynthesis by Ramlibacter agri sp. nov., isolated from agriculture soil in Korea
Ram Hari Dahal, Jungmin Kim, Dhiraj Kumar Chaudhary, Thi Tuyet Nhan Le, Dong-Uk Kim, Hyein Jang, Jaisoo Kim
Antonie van Leeuwenhoek.2022; 115(5): 563. CrossRef -
Aestuarium zhoushanense is a later heterotypic synonym of Marivivens donghaensis, and transfer of Paradonghicola geojensis to the genus Marivivens as Marivivens geojensis comb. nov
Luxuan Qu, Yating Li, Wanpeng Wang, Zongze Shao, Zheng Gao, Qiliang Lai
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Lysobacter chinensis sp. nov., a cellulose-degrading strain isolated from cow dung compost
Yuyue Liu, Liuyan Zhou, Xinping Yang, Pengbin Li, Jinping Dai, Yuqing Xie, Xiaowu Wang, Zhifang Wang, Zhanqiang Su, Lei Feng
Antonie van Leeuwenhoek.2022; 115(8): 1031. CrossRef -
Quadrisphaera setariae sp. nov., polyphosphate-accumulating bacterium occurring as tetrad or aggregate cocci and isolated from Setaria viridis
Inhyup Kim, Geeta Chhetri, Jiyoun Kim, Yoonseop So, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Thauera sedimentorum sp. nov., Isolated from Coastal Sediment
Jihye Baek, Nattira Jaikwang, Jong-Hwa Kim, Jung-Hoon Yoon, Jung-Sook Lee, Ampaitip Sukhoom, Wonyong Kim
Current Microbiology.2022;[Epub] CrossRef - Description of Deefgea piscis sp. nov., and Deefgea tanakiae sp. nov., isolated from the gut of Korean indigenous fish
Do-Hun Gim, So-Yeon Lee, Jeong Eun Han, Jae-Yun Lee, Seo Min Kang, Jin-Woo Bae
Journal of Microbiology.2022; 60(11): 1061. CrossRef - Flavobacterium proteolyticum sp. nov., isolated from aquaculture water
Juan Du, Yang Liu, Tao Pei, Anzhang Li, Ming-Rong Deng, Honghui Zhu
Archives of Microbiology.2022;[Epub] CrossRef -
Paracoccus everestensis sp. nov., a novel bacterium with great antioxidant capacity isolated from the north slope of Mount Everest
Xiaowen Cui, Yang Liu, Yajie Xu, Tuo Chen, Songlin Zhang, Jinxiu Wang, Ruiqi Yang, Guangxiu Liu, Wei Zhang, Gaosen Zhang
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - [Retracted] Assembly of 97 Novel Bacterial Genomes in the Microbial Community Affiliated with Polyvinyl Alcohol in Soil of Northern China
Jiaxing Liu, Xun Gu, Hui Li, Yu-Hang Zhang
BioMed Research International.2022;[Epub] CrossRef -
Comparative Genomics Reveals Genetic Diversity and Metabolic Potentials of the Genus
Qipengyuania
and Suggests Fifteen Novel Species
Yang Liu, Tao Pei, Juan Du, Qing Yao, Ming-Rong Deng, Honghui Zhu, Gaurav Sharma, Feng Cai, Xuewei Xu
Microbiology Spectrum.2022;[Epub] CrossRef -
Sagittula salina sp. nov., isolated from marine waste
Leila Satari, Esther Molina-Menor, Àngela Vidal-Verdú, Javier Pascual, Juli Peretó, Manuel Porcar
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
Pseudophaeobacter flagellatus sp. nov., isolated from coastal water
Yong Guan, Yue Jiang, Young-Min Kim, Seung Yeob Yu, Seung-Hyeon Choi, Hanna Choe, Zhun Li, Mi-Kyung Lee
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Thalassococcus arenae sp. nov. isolated from sea sand
Veeraya Weerawongwiwat, Jong-Hwa Kim, Jung-Sook Lee, Jung-Hoon Yoon, Ampaitip Sukhoom, Wonyong Kim
Archives of Microbiology.2022;[Epub] CrossRef - Microaerobic enrichment of benzene-degrading bacteria and description of Ideonella benzenivorans sp. nov., capable of degrading benzene, toluene and ethylbenzene under microaerobic conditions
Anna Bedics, András Táncsics, Erika Tóth, Sinchan Banerjee, Péter Harkai, Balázs Kovács, Károly Bóka, Balázs Kriszt
Antonie van Leeuwenhoek.2022; 115(9): 1113. CrossRef - Hymenobacter lucidus sp. nov., and Hymenobacter nitidus sp. nov., isolated from soil
Hyejin Oh, Hyang Burm Lee, Myung Kyum Kim
Archives of Microbiology.2022;[Epub] CrossRef - Natronococcus pandeyae sp. nov., a Novel Haloarchaeon from Sambhar Salt Lake
Swapnil Kajale, Neelima Deshpande, Tushar Lodha, Yogesh Shouche, Avinash Sharma
Current Microbiology.2022;[Epub] CrossRef -
Parachryseolinea silvisoli gen. nov., sp. nov., isolated from forest soil, and reclassification of Chryseolinea flava as Pseudochryseolinea flava gen. nov., comb. nov.
Chunling Wang, Yingying Lv, Anzhang Li, Qing Yao, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Whole genome sequencing of the halophilic Halomonas qaidamensis XH36, a novel species strain with high ectoine production
Tiantian Zhang, Tianqi Cui, Yaning Cao, Yongzhen Li, Fenghui Li, Derui Zhu, Jiangwa Xing
Antonie van Leeuwenhoek.2022; 115(4): 545. CrossRef -
Draft Genome Sequence of Labrys okinawensis, Isolated from
Acaciella
sp. Nodules in Mexico
Belén Chávez-Ramírez, Violeta Larios-Serrato, Paulina Estrada-de los Santos, Leighton Pritchard
Microbiology Resource Announcements.2022;[Epub] CrossRef -
Sporosarcina jiandibaonis sp. nov., isolated from saline soil
Delong Kong, Zhanfeng Xia, Yan Gao, Yiqing Zhou, Xu Jiang, Piao Xu, Wei Guo, Zhiyong Ruan
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
Niabella agricola sp. nov., isolated from paddy soil
Shih-Yao Lin, Chia-Fang Tsai, Asif Hameed, Tzung-Han Lee, Chiu-Chung Young
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Description of Corynebacterium poyangense sp. nov., isolated from the feces of the greater white-fronted geese (Anser albifrons)
Qian Liu, Guoying Fan, Kui Wu, Xiangning Bai, Xi Yang, Wentao Song, Shengen Chen, Yanwen Xiong, Haiying Chen
Journal of Microbiology.2022; 60(7): 668. CrossRef - Paludisphaera rhizosphaereae sp. nov., a new member of the family Isosphaeraceae, isolated from the rhizosphere soil of Erianthus ravennae
Khongsai L. Lhingjakim, Nandardhane Smita, Gaurav Kumar, Uppada Jagadeeshwari, Shabbir Ahamad, Chintalapati Sasikala, Chintalapati Venkata Ramana
Antonie van Leeuwenhoek.2022; 115(8): 1073. CrossRef -
Fibrella aquatilis sp. nov., Fibrella rubiginis sp. nov. and Fibrella forsythiae sp. nov., isolated from freshwater, rusty iron and forsythia flower
Heeyoung Kang, Haneul Kim, Seokhyeon Bae, Kiseong Joh
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Corallococcus silvisoli sp. nov., a novel myxobacterium isolated from subtropical forest soil
Xian-Jiao Zhang, Guang-Da Feng, Yang Liu, Yang Zhou, Xiaoqin Deng, Qing Yao, Honghui Zhu
Archives of Microbiology.2022;[Epub] CrossRef -
Fundicoccus fermenti sp. nov., an indigo-reducing facultative anaerobic alkaliphile isolated from indigo fermentation liquor used for dyeing
Zhihao Tu, Helena de Fátima Silva Lopes, Isao Yumoto
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Lignin-Oxidizing Vibrios Involved in the Mineralization of Plant Detritus in the Continental Slope
Jianyang Li, Chunming Dong, Biswarup Sen, Qiliang Lai, Linfeng Gong, Guangyi Wang, Zongze Shao
SSRN Electronic Journal .2022;[Epub] CrossRef - Mapping Strengths and Weaknesses of Different Clustering Approaches to Deciphering Bacterial Chimerism
David J. Burks, Rajeev K. Azad
OMICS: A Journal of Integrative Biology.2022; 26(8): 422. CrossRef - Unraveling Nitrogen, Sulfur, and Carbon Metabolic Pathways and Microbial Community Transcriptional Responses to Substrate Deprivation and Toxicity Stresses in a Bioreactor Mimicking Anoxic Brackish Coastal Sediment Conditions
Paula Dalcin Martins, Maider J. Echeveste Medrano, Arslan Arshad, Julia M. Kurth, Heleen T. Ouboter, Huub J. M. Op den Camp, Mike S. M. Jetten, Cornelia U. Welte
Frontiers in Microbiology.2022;[Epub] CrossRef - Rhizobium setariae sp. nov., an Indole-3-Acetic Acid-Producing Bacterium Isolated from Green Foxtail, Setaria viridis
Minchung Kang, Taegun Seo
Current Microbiology.2022;[Epub] CrossRef - Description of Flavobacterium cyclinae sp. nov. and Flavobacterium channae sp. nov., isolated from the intestines of Cyclina sinensis (Corb shell) and Channa argus (Northern snakehead)
Seomin Kang, Jae-Yun Lee, Jeong Eun Han, Yun-Seok Jeong, Do-Hun Gim, Jin-Woo Bae
Journal of Microbiology.2022; 60(9): 890. CrossRef - Paenibacillus arenosi sp. nov., a siderophore-producing bacterium isolated from coastal sediment
Jihye Baek, Veeraya Weerawongwiwat, Jong-Hwa Kim, Jung-Hoon Yoon, Jung-Sook Lee, Ampaitip Sukhoom, Wonyong Kim
Archives of Microbiology.2022;[Epub] CrossRef -
Vagococcus allomyrinae sp. nov. and Enterococcus larvae sp. nov., isolated from larvae of Allomyrina dichotoma
Sung-Min Kim, Yeong-Sik Byeon, Hong Lim Yang, In Seop Kim, Soon Dong Lee
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Staphylococcus ratti sp. nov. Isolated from a Lab Rat
Vojtěch Kovařovic, Ivo Sedláček, Petr Petráš, Stanislava Králová, Ivana Mašlaňová, Pavel Švec, Meina Neumann-Schaal, Tibor Botka, Tereza Gelbíčová, Eva Staňková, Jiří Doškař, Roman Pantůček
Pathogens.2022; 11(1): 51. CrossRef -
Mucilaginibacter rivuli sp. nov., isolated from a water rivulet
Seokhyeon Bae, Heeyoung Kang, Haneul Kim, Kiseong Joh
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
A Novel
Alteromonas
Phage Lineage with a Broad Host Range and Small Burst Size
Yahui Yang, Ruijie Ma, Chen Yu, Junlei Ye, Xiaowei Chen, Long Wang, Nianzhi Jiao, Rui Zhang, Wei-Hua Chen
Microbiology Spectrum.2022;[Epub] CrossRef -
Muricauda aurea sp. nov. and Muricauda profundi sp. nov., two marine bacteria isolated from deep sea sediment of Pacific Ocean
Sufang Zhao, Renju Liu, Qiliang Lai, Zongze Shao
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Lysobacter ciconiae sp. nov., and Lysobacter avium sp. nov., isolated from the faeces of an Oriental stork
So-Yeon Lee, Pil Soo Kim, Hojun Sung, Dong-Wook Hyun, Jin-Woo Bae
Journal of Microbiology.2022; 60(5): 469. CrossRef - Culturomics of Bacteria from Radon-Saturated Water of the World’s Oldest Radium Mine
Gabriela Kapinusova, Kunal Jani, Tereza Smrhova, Petr Pajer, Irena Jarosova, Jachym Suman, Michal Strejcek, Ondrej Uhlik, Jing Han
Microbiology Spectrum.2022;[Epub] CrossRef - Pseudomonas germanica sp. nov., isolated from Iris germanica rhizomes
Kostadin Evgeniev Atanasov, David Miñana Galbis, Julia Gallego, Annabel Serpico, Montserrat Bosch, Teresa Altabella, Albert Ferrer
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
Cohnella herbarum sp. nov., isolated from wild grass fermentation broth
Miyoung Won, Shin Ae Lee, Seung-Beom Hong, Byeong-Hak Han, Soon-Wo Kwon
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Description of Prasinibacter corallicola gen. nov., sp. nov., a zeaxanthin-producing bacterium isolated from stony coral Porites lutea
Guanghua Wang, Jianfeng Liu, Yuanjin Li, Jin Li, Jixin Luo, Biao Chen, Zhiheng Liao, Hongfei Su, Jiayuan Liang, Kefu Yu
Antonie van Leeuwenhoek.2022; 115(7): 933. CrossRef - Phylogenomic analysis of a metagenome-assembled genome indicates a new taxon of an anoxygenic phototroph bacterium in the family Chromatiaceae and the proposal of “Candidatus Thioaporhodococcus” gen. nov
Bakshi Amulyasai, Rai Anusha, Chintalapati Sasikala, Chintalapati Venkata Ramana
Archives of Microbiology.2022;[Epub] CrossRef -
Mucilaginibacter aurantiaciroseus sp. nov. and Mucilaginibacter flavidus sp. nov., isolated from Renlongba glacier on the Tibetan Plateau
Lei-Lei Yang, Yu Pang, Hong-Can Liu, Yu-Hua Xin, Qing Liu
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
Aeromicrobium stalagmiti sp. nov., isolated from a lava cave
Yeong-Sik Byeon, Sung-Min Kim, Hong Lim Yang, In Seop Kim, Soon Dong Lee
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
Halorubrum salinarum sp. nov., an extremely halophilic archaeon isolated from a saturated brine pond of a saltern
Ho Le Han, Reneelyn E. Danganan, Zhun Li, Na-Ri Shin, Reuel M. Bennett, Gina R. Dedeles, Song-Gun Kim
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Sulfuriroseicoccus oceanibius gen. nov., sp. nov., a representative of the phylum Verrucomicrobia with a special cytoplasmic membrane
Xi Feng, Qi-Yun Liang, Qi-Hang Zou, Meng-Qi Ye, Zong-Jun Du
Antonie van Leeuwenhoek.2022; 115(2): 337. CrossRef -
Sediminibacillus dalangtanensis sp. nov., a moderate halophile isolated from hypersaline sediments of the Qaidam Basin in Northwest China
Ting Huang, Qiliang Lai, Long Xiao, Linfeng Gong, Zongze Shao, Hongmei Wang, Yi Xu, Ricardo Amils, Cristina Escudero, José M. Martinez
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
Croceicoccus hydrothermalis sp. nov., isolated from shallow-sea hydrothermal system off Kueishantao Island
Beihan Chen, Youting Ye, Dan Lin, Mu Zhang, Jia Sun, Kai Tang
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Deciphering Genomes: Genetic Signatures of Plant-Associated Micromonospora
Raúl Riesco, Maite Ortúzar, José Manuel Fernández-Ábalos, Martha E. Trujillo
Frontiers in Plant Science.2022;[Epub] CrossRef - Erwinia phyllosphaerae sp. nov., a novel bacterium isolated from phyllosphere of pomelo (Citrus maxima)
Ming-Kai Pan, Guang-Da Feng, Qing Yao, Jiali Li, Chenjian Liu, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
Capillimicrobium parvum gen. nov., sp. nov., a novel representative of Capillimicrobiaceae fam. nov. within the order Solirubrobacterales, isolated from a grassland soil
Selma Vieira, Katharina J. Huber, Alicia Geppert, Jacqueline Wolf, Meina Neumann-Schaal, Manja Luckner, Gerhard Wanner, Mathias Müsken, Jörg Overmann
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
Salegentibacter lacus sp. nov. and Salegentibacter tibetensis sp. nov., isolated from hypersaline lakes on the Tibetan Plateau
Huibin Lu, Peixin Gao, Dorji Phurbu, Qinglong L. Wu, Peng Xing
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
Sphingomonas cannabina sp. nov., isolated from Cannabis sativa L. ‘Cheungsam’
Doeun Jeon, Lingmin Jiang, Yuxin Peng, Jiyoon Seo, Zhun Li, Seung-Hwan Park, Rae-Dong Jeong, Soon Ju Park, Jae Cheol Jeong, Jiyoung Lee
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
Ideonella alba sp. nov. and Ideonella aquatica sp. nov. isolated from an aquaculture farm
Juan Du, Yang Liu, Tao Pei, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Gottfriedia endophyticus sp. nov., a novel indole-acetic acid producing bacterium isolated from the roots of rice plant
Geeta Chhetri, Inhyup Kim, Taegun Seo
Antonie van Leeuwenhoek.2022; 115(7): 943. CrossRef - Gut microbiome of the largest living rodent harbors unprecedented enzymatic systems to degrade plant polysaccharides
Lucelia Cabral, Gabriela F. Persinoti, Douglas A. A. Paixão, Marcele P. Martins, Mariana A. B. Morais, Mariana Chinaglia, Mariane N. Domingues, Mauricio L. Sforca, Renan A. S. Pirolla, Wesley C. Generoso, Clelton A. Santos, Lucas F. Maciel, Nicolas Terrap
Nature Communications.2022;[Epub] CrossRef - Aggregatimonas sangjinii gen. nov., sp. nov., a novel silver nanoparticle synthesizing bacterium belonging to the family Flavobacteriaceae
Dawoon Chung, Jaejoon Jung, Jaoon Young Hwan Kim, Kyung Woo Kim, Yong Min Kwon
Antonie van Leeuwenhoek.2022; 115(2): 325. CrossRef - Comparative genomic analyses of four novel Ramlibacter species and the cellulose-degrading properties of Ramlibacter cellulosilyticus sp. nov.
Minchung Kang, Geeta Chhetri, Inhyup Kim, Yoonseop So, Taegun Seo
Scientific Reports.2022;[Epub] CrossRef -
Cellulosimicrobium protaetiae sp. nov., isolated from the gut of the larva of Protaetia brevitarsis seulensis
Ho Le Han, Tra T. H. Nguyen, Zhun Li, Na-Ri Shin, Song-Gun Kim
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Prokaryotes of renowned Karlovy Vary (Carlsbad) thermal springs: phylogenetic and cultivation analysis
Tereza Smrhova, Kunal Jani, Petr Pajer, Gabriela Kapinusova, Tomas Vylita, Jachym Suman, Michal Strejcek, Ondrej Uhlik
Environmental Microbiome.2022;[Epub] CrossRef -
Draft Genome Sequences of the Kocuria subflava Type Strain KCTC 39547 and
Kocuria
sp. Strain JC486, a Newly Isolated Strain from a Wild Ass Sanctuary in Gujarat, India
Jagadeeshwari Uppada, Sasikala Chintalapati, Karthika K, Venkata Ramana Chintapati, J. Cameron Thrash
Microbiology Resource Announcements.2022;[Epub] CrossRef - Cellulomonas fulva sp. nov., isolated from oil-contaminated soil
Ram Hari Dahal, Jungmin Kim, Dong-Uk Kim, Ke Dong, Yongseok Hong, Dhiraj Kumar Chaudhary
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
Hymenobacter piscis sp. nov., isolated from a fish pond
Shih-Yi Sheu, Che-Chia Yang, Soon-Wo Kwon, Wen-Ming Chen
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Corynebacterium uberis sp. nov. frequently isolated from bovine mastitis
Sonja Kittl, Eveline Studer, Isabelle Brodard, Andreas Thomann, Jörg Jores
Systematic and Applied Microbiology.2022; 45(4): 126325. CrossRef -
Spiractinospora alimapuensis gen. nov., sp. nov., isolated from marine sediment of Valparaíso Bay (Chile) and proposal for reclassification of two species of the genus Nocardiopsis
Fernanda P. Claverías, Néstor Serna-Cardona, Andrés Cumsille, Leonardo Zamora-Leiva, Raúl Riesco, Eduardo Couve, Martha E. Trujillo, Beatriz Cámara
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Microvirga splendida sp. nov., bacteria isolated from soil
Yuna Park, Soohyun Maeng, Tuvshinzaya Damdintogtokh, Hyejin Oh, Minji Bang, Jaewoo Bai, Myung Kyum Kim
Antonie van Leeuwenhoek.2022; 115(6): 741. CrossRef - Genome analysis of Pseudomonas species reveals that Pseudomonas panacis Park et al. 2005 is a later heterotypic synonym of Pseudomonas marginalis (Brown 1918) Stevens 1925 (Approved Lists 1980)
Ritu Rani Archana Kujur, Sushanta Deb, Subrata K. Das
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
Halomonas antri sp. nov., a carotenoid-producing bacterium isolated from surface seawater
Yoonseop So, Geeta Chhetri, Inhyup Kim, Minchung Kang, Jiyoun Kim, Byungjo Lee, Wonhee Jang, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
Parvicella tangerina gen. nov., sp. nov. (Parvicellaceae fam. nov., Flavobacteriales), first cultured representative of the marine clade UBA10066, and Lysobacter luteus sp. nov., from activated sludge of a seawater-processing wastewater treat
Teresa Lucena, Olga Sánchez, Isabel Sanz-Saez, Silvia G. Acinas, Laura Garrido, Jordi Mas, M. Carmen Macián, María A. Ruvira, David R. Arahal, María J. Pujalte
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Sphingomonas folii sp. nov., Sphingomonas citri sp. nov. and Sphingomonas citricola sp. nov., isolated from citrus phyllosphere
Guang-Da Feng, Jiali Li, Mingkai Pan, Xiaoqin Deng, Meng Chen, Qing Yao, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
Frequent Occurrence and Metabolic Versatility of
Marinifilaceae
Bacteria as Key Players in Organic Matter Mineralization in Global Deep Seas
Jianyang Li, Chunming Dong, Qiliang Lai, Guangyi Wang, Zongze Shao, Thomas J. Sharpton
mSystems.2022;[Epub] CrossRef -
Tenebrionicola larvae gen. nov., sp. nov., isolated from larvae of mealworm Tenebrio molitor L., and a proposal to transfer Erwinia teleogrylli Liu et al. 2016 to a new genus Entomohabitans as Entomohabitans teleogrylli comb. nov.
Soon Dong Lee, Seong-Min Kim, Yeong-Sik Byeon, Hong Lim Yang, Soo Hong Chang, In Seop Kim
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
Sessilibacter corallicola gen. nov., sp. nov., a sessile bacterium isolated from coral Porites lutea
Jianfeng Liu, Jin Li, Jixin Luo, Yuanjin Li, Zian Yang, Chengli Huang, Feilong Sun, Guanghua Wang
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Moraxella tetraodonis sp. nov., isolated from freshwater pufferfish (Tetraodon cutcutia) skin
Lipika Das, Subrata K. Das
Archives of Microbiology.2022;[Epub] CrossRef -
Sulfurimonas marina sp. nov., an obligately chemolithoautotrophic, sulphur-oxidizing bacterium isolated from a deep-sea sediment sample from the South China Sea
Zhaodi Wang, Shasha Wang, Qiliang Lai, Shiping Wei, Lijing Jiang, Zongze Shao
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Genome-based reclassification of Azospirillum brasilense Az39 as the type strain of Azospirillum argentinense sp. nov.
Natália dos Santos Ferreira, Anahí Coniglio, Mariana Puente, Fernando Hayashi Sant’Anna, Guillermo Maroniche, Julia García, Romina Molina, Sofia Nievas, Camila Gazolla Volpiano, Adriana Ambrosini, Luciane M. P. Passaglia, Raul O. Pedraza, Verônica Massena
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Genome-based, phenotypic and chemotaxonomic classification of Faecalibacterium strains: proposal of three novel species Faecalibacterium duncaniae sp. nov., Faecalibacterium hattorii sp. nov. and Faecalibacterium gallinarum sp. nov.
Mitsuo Sakamoto, Naomi Sakurai, Hiroki Tanno, Takao Iino, Moriya Ohkuma, Akihito Endo
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Bradyrhizobium altum sp. nov., Bradyrhizobium oropedii sp. nov. and Bradyrhizobium acaciae sp. nov. from South Africa show locally restricted and pantropical nodA phylogeographic patterns
Juanita R. Avontuur, Marike Palmer, Chrizelle W. Beukes, Wai Y. Chan, Taponeswa Tasiya, Elritha van Zyl, Martin P.A. Coetzee, Tomasz Stepkowski, Stephanus N. Venter, Emma T. Steenkamp
Molecular Phylogenetics and Evolution.2022; 167: 107338. CrossRef - Azospirillum tabaci sp. nov., a bacterium isolated from rhizosphere soil of Nicotiana tabacum L
Yan-Qing Duan, Xing-Kui Zhou, Neeli Habib, Shi-Qiang Gao, Li-Min Dong, Xiao-Fei Liu, Yang-Mei Shi, Wen-Jun Li, Gang Du
Archives of Microbiology.2022;[Epub] CrossRef - Cecal Microbial Hydrogen Cycling Potential Is Linked to Feed Efficiency Phenotypes in Chickens
Gustavo Antonio Ramírez, Jitendra Keshri, Isabella Vahrson, Arkadiy I. Garber, Mark E. Berrang, Nelson A. Cox, Fernando González-Cerón, Samuel E. Aggrey, Brian B. Oakley
Frontiers in Veterinary Science.2022;[Epub] CrossRef -
Enterococcus alishanensis sp. nov., a novel lactic acid bacterium isolated from fresh coffee beans
Jen-hao Chung, Misa Otoguro, Fujitoshi Yanagida, Hui-chung Wu, Yu-chung Chang, Yun-Shien Lee, Yi-sheng Chen
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Comparative Genomics of the Genus Pseudomonas Reveals Host- and Environment-Specific Evolution
Zaki Saati-Santamaría, Riccardo Baroncelli, Raúl Rivas, Paula García-Fraile, Olaya Rendueles Garcia
Microbiology Spectrum.2022;[Epub] CrossRef - Croceicoccus gelatinilyticus sp. nov., isolated from a tidal flat sediment
Tao Pei, Yang Liu, Juan Du, Kunpeng Huang, Ming-Rong Deng, Honghui Zhu
Archives of Microbiology.2022;[Epub] CrossRef - Shewanella jiangmenensis sp. nov., isolated from aquaculture water
Yingli Song, Anzhang Li, Shuaishuai Xu, Mingxia Zhang, Qing Yao, Lian Ma, Honghui Zhu
Archives of Microbiology.2022;[Epub] CrossRef - Mesonia aestuariivivens sp. nov., isolated from a tidal flat
Sooyeon Park, Jung-Sook Lee, Wonyong Kim, Jung-Hoon Yoon
Archives of Microbiology.2022;[Epub] CrossRef - Chryseobacterium tagetis sp. nov., a plant growth promoting bacterium with an antimicrobial activity isolated from the roots of medicinal plant (Tagetes patula)
Geeta Chhetri, Inhyup Kim, Jiyoun Kim, Yoonseop So, Taegun Seo
The Journal of Antibiotics.2022; 75(6): 312. CrossRef - Description ofPseudogemmobacter faecipullorumsp. nov., isolated from poultry manure
Shih-Yao Lin, Asif Hameed, Chia-Fang Tsai, Yu-Shan Tang, Chiu-Chung Young
FEMS Microbiology Letters.2022;[Epub] CrossRef -
Acetylenotrophic and Diazotrophic
Bradyrhizobium
sp. Strain I71 from TCE-Contaminated Soils
Denise M. Akob, John M. Sutton, Timothy J. Bushman, Shaun M. Baesman, Edina Klein, Yesha Shrestha, Robert Andrews, Janna L. Fierst, Max Kolton, Sara Gushgari-Doyle, Ronald S. Oremland, John L. Freeman, Jeremy D. Semrau
Applied and Environmental Microbiology.2022;[Epub] CrossRef - Definition of the Metagenomic Profile of Ocean Water Samples From the Gulf of Mexico Based on Comparison With Reference Samples From Sites Worldwide
Antonio Loza, Fernando García-Guevara, Lorenzo Segovia, Alejandra Escobar-Zepeda, Maria del Carmen Sanchez-Olmos, Enrique Merino, Alejandro Sanchez-Flores, Liliana Pardo-Lopez, Katy Juarez, Rosa-Maria Gutierrez-Rios
Frontiers in Microbiology.2022;[Epub] CrossRef - Marinobacterium arenosum sp. nov., isolated from a coastal sand
Yunjeong Lee, Veeraya Weerawongwiwat, Jong-Hwa Kim, Jung-Hoon Yoon, Jung-Sook Lee, Ampaitip Sukhoom, Wonyong Kim
Archives of Microbiology.2022;[Epub] CrossRef -
Nocardioides palaemonis sp. nov. and Tessaracoccus palaemonis sp. nov., isolated from the gastrointestinal tract of lake prawn
Do-Yeon Kim, In-Chul Jeong, So-Yeon Lee, Yun-Seok Jeong, Jeong Eun Han, Euon Jung Tak, June-Young Lee, Pil Soo Kim, Dong-Wook Hyun, Jin-Woo Bae
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Genomic characterization and production of antimicrobial lipopeptides by Bacillus velezensis P45 growing on feather by-products
Carolini Esmeriz da Rosa, Cristian Mauricio Barreto Pinilla, Paolo Stincone, Jamile Queiroz Pereira, Ana Paula Muterle Varela, Fabiana Quoos Mayer, Adriano Brandelli
Journal of Applied Microbiology.2022; 132(3): 2067. CrossRef - Subtercola endophyticus sp. nov., a cold-adapted bacterium isolated from Abies koreana
Lingmin Jiang, Yuxin Peng, Jiyoon Seo, Doeun Jeon, Mi Gyeong Jo, Ju Huck Lee, Jae Cheol Jeong, Cha Young Kim, Hyeong Cheol Park, Jiyoung Lee
Scientific Reports.2022;[Epub] CrossRef - Type IV pili trigger episymbiotic association of Saccharibacteria with its bacterial host
Bingliang Xie, Jian Wang, Yong Nie, Jing Tian, Zerui Wang, Dongwei Chen, Beiyu Hu, Xiao-Lei Wu, Wenbin Du
Proceedings of the National Academy of Sciences.2022;[Epub] CrossRef - Gymnodinialimonas ceratoperidinii gen. nov., sp. nov., isolated from rare marine dinoflagellate Ceratoperidinium margalefii
Yue Jiang, Yuxin Peng, Hyeon Ho Shin, Hyun Jung Kim, Ki-Hyun Kim, Lingmin Jiang, Jiyoung Lee, Zhun Li
Archives of Microbiology.2022;[Epub] CrossRef - Pufferfish (Tetraodon cutcutia) Sampled from a Freshwater River Serves as an Intermediate Reservoir of a Sucrose Nonfermenting Variant of Vibrio cholerae PS-4
Lipika Das, Sushanta Deb, Eiji Arakawa, Shinji Yamasaki, Subrata K. Das, Courtney J. Robinson
Microbiology Spectrum.2022;[Epub] CrossRef -
Deinococcus betulae sp. nov. and Deinococcus arboris sp. nov., novel bacteria isolated from bark of birch tree (Betula platyphylla)
Seokhyeon Bae, Heeyoung Kang, Haneul Kim, Kiseong Joh
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Hi-C deconvolution of a textile dye–related microbiome reveals novel taxonomic landscapes and links phenotypic potential to individual genomes
Ayixon Sánchez-Reyes, Luz Bretón-Deval, Hayley Mangelson, Ilse Salinas-Peralta, Alejandro Sanchez-Flores
International Microbiology.2022; 25(1): 99. CrossRef -
Thermal Endurance by a Hot-Spring-Dwelling Phylogenetic Relative of the Mesophilic
Paracoccus
Nibendu Mondal, Chayan Roy, Sumit Chatterjee, Jagannath Sarkar, Subhajit Dutta, Sabyasachi Bhattacharya, Ranadhir Chakraborty, Wriddhiman Ghosh, Jeffrey A. Gralnick
Microbiology Spectrum.2022;[Epub] CrossRef - Microbiota of the Pregnant Mouse: Characterization of the Bacterial Communities in the Oral Cavity, Lung, Intestine, and Vagina through Culture and DNA Sequencing
Jonathan M. Greenberg, Roberto Romero, Andrew D. Winters, Jose Galaz, Valeria Garcia-Flores, Marcia Arenas-Hernandez, Jonathan Panzer, Zachary Shaffer, David J. Kracht, Nardhy Gomez-Lopez, Kevin R. Theis, Jennifer M. Auchtung
Microbiology Spectrum.2022;[Epub] CrossRef -
Sphingomonas radiodurans sp. nov., a novel radiation-resistant bacterium isolated from the north slope of Mount Everest
Yang Liu, Tuo Chen, Xiaowen Cui, Yeteng Xu, Shixin Hu, Yidan Zhao, Wei Zhang, Guangxiu Liu, Gaosen Zhang
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
Enterovibrio paralichthyis sp. nov., isolated from the gut of an olive flounder Paralichthys olivaceus
Young-Ok Kim, In-Suk Park, Dong-Gyun Kim, Sooyeon Park, Sung Hoon Han, Jung-Hoon Yoon
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Deep Learning Encoding for Rapid Sequence Identification on Microbiome Data
Jacob Borgman, Karen Stark, Jeremy Carson, Loren Hauser
Frontiers in Bioinformatics.2022;[Epub] CrossRef - Arthrobacter wenxiniae sp. nov., a novel plant growth-promoting rhizobacteria species harbouring a carotenoids biosynthetic gene cluster
Yu-chen Sun, Pengbo Sun, Jing Xue, Yunpeng Du, Hui Yan, Li-wei Wang, Xin-xin Yi, Jian-guang Sun, Xiuhai Zhang, Jun-lian Gao
Antonie van Leeuwenhoek.2022; 115(3): 353. CrossRef - Microvirga terricola sp. nov. and Microvirga solisilvae sp. nov, isolated from forest soil
Xianjiao Zhang, Guang-Da Feng, Xiangling Zhen, Yulian Zhang, Xiaoqin Deng, Honghui Zhu, Qing Yao
Archives of Microbiology.2022;[Epub] CrossRef -
Pararoseburia lenta gen. nov., sp. nov. isolated from human faeces
Rashidin Abdugheni, Yu-Jing Wang, Dan-Hua Li, Meng-Xuan Du, Chang Liu, Nan Zhou, Shuang-Jiang Liu
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Six novel Micromonospora species associated with the phyllosphere and roots of leguminous plants: Micromonospora alfalfae sp. nov., Micromonospora cabrerizensis sp. nov., Micromonospora foliorum sp. nov., Micromonospora hortensis sp. nov., Micromonospora
Raúl Riesco, Maite Ortúzar, Brenda Román-Ponce, Fernando Sánchez-Juanes, José Mariano Igual, Martha E. Trujillo
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Rothia santali sp. nov., endophytic bacteria isolated from sandalwood (Santalum album L.) seedling
Ngangyola Tuikhar, Kiran Kirdat, Gayatri Nair, S. Padma, Vipool Thorat, P. Swetha, Shivaji Sathe, R. Sundararaj, Amit Yadav
Archives of Microbiology.2022;[Epub] CrossRef -
Rhodococcus spelaei sp. nov., isolated from a cave, and proposals that Rhodococcus biphenylivorans is a later synonym of Rhodococcus pyridinivorans, Rhodococcus qingshengii and Rhodococcus baikonurensis are later synonyms of Rhodococcus eryth
Soon Dong Lee, In Seop Kim
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Sweet spheres: succession and CAZyme expression of marine bacterial communities colonizing a mix of alginate and pectin particles
Carina Bunse, Hanna Koch, Sven Breider, Meinhard Simon, Matthias Wietz
Environmental Microbiology.2021; 23(6): 3130. CrossRef -
Pareuzebyella sediminis gen. nov., sp. nov., a novel marine bacterium in the family Flavobacteriaceae, isolated from a tidal flat sediment
Zhaobin Huang, Xiaomei Wei, Qiliang Lai, Shiyong Chen, Jianjun Yuan
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Description of Devosia faecipullorum sp. nov., harboring antibiotic- and toxic compound-resistant genes, isolated from poultry manure
Shih-Yao Lin, Chia-Fang Tsai, Asif Hameed, Yu-Shan Tang, Chiu-Chung Young
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Description of Nocardioides piscis sp. nov., Sphingomonas piscis sp. nov. and Sphingomonas sinipercae sp. nov., isolated from the intestine of fish species Odontobutis interrupta (Korean spotted sleeper) and Siniperca scherzeri (leopard mandarin fish)
Dong-Wook Hyun, Yun-Seok Jeong, Jae-Yun Lee, Hojun Sung, So-Yeon Lee, Jee-Won Choi, Hyun Sik Kim, Pil Soo Kim, Jin-Woo Bae
Journal of Microbiology.2021; 59(6): 552. CrossRef -
Pseudomonas schmalbachii sp. nov., isolated from the gut of a millipede (Trigoniulus corallinus) from a coconut tree
Matan Shelomi, Wen-Ming Chen, Hsin-Kuang Chen, Hsin-Ying Lee, Chiu-Chung Young, Shih-Yao Lin, Shwu-Jen Liaw
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Fuscibacter oryzae gen. nov., sp. nov., a phosphate-solubilizing bacterium isolated from the rhizosphere of rice plant
Geeta Chhetri, Minchung Kang, Jiyoun Kim, Inhyup Kim, Yoonseop So, Taegun Seo
Antonie van Leeuwenhoek.2021; 114(9): 1453. CrossRef - Genome insight and description of antibiotic producing Massilia antibiotica sp. nov., isolated from oil-contaminated soil
Ram Hari Dahal, Dhiraj Kumar Chaudhary, Jaisoo Kim
Scientific Reports.2021;[Epub] CrossRef - Maritimibacter harenae sp. nov. and Sneathiella litorea sp. nov.: members of Alphaproteobacteria isolated from sea sand
Shehzad Abid Khan, Hye Su Jung, Hye Yoon Park, Che Ok Jeon
Antonie van Leeuwenhoek.2021; 114(6): 799. CrossRef -
Palleronia sediminis sp. nov. and Flavivirga algicola sp. nov., two marine bacteria isolated from offshore areas near Weihai
Xun-Ke Sun, Ya-Ning Zhang, Yu-Yao Jia, Yan-Lin Zhong, Guan-Jun Chen, Zong-Jun Du
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Paenarthrobacter sp. GOM3 Is a Novel Marine Species With Monoaromatic Degradation Relevance
Jaime Rosas-Díaz, Alejandra Escobar-Zepeda, Libertad Adaya, Jorge Rojas-Vargas, Diego Humberto Cuervo-Amaya, Ayixon Sánchez-Reyes, Liliana Pardo-López
Frontiers in Microbiology.2021;[Epub] CrossRef - Pseudidiomarina piscicola sp. nov., isolated from cultured European seabass, Dicenthrarchus labrax
M. Carmen Macián, Teresa Lucena, David R. Arahal, María A. Ruvira, Rosa Aznar, María J. Pujalte
Archives of Microbiology.2021; 203(4): 1293. CrossRef - Pseudoprevotella muciniphila gen. nov., sp. nov., a mucin-degrading bacterium attached to the bovine rumen epithelium
Sang Weon Na, Byung Hee Chun, Seok-Hyeon Beak, Shehzad Abid Khan, Md. Najmul Haque, Jae Sung Lee, Che Ok Jeon, Sang-Suk Lee, Myunggi Baik, Pankaj Kumar Arora
PLOS ONE.2021; 16(5): e0251791. CrossRef -
Nocardioides baculatus sp. nov., a novel actinomycete isolated from the rhizosphere of Tagetes patula
Geeta Chhetri, Inhyup Kim, Minchung Kang, Jiyoun Kim, Yoonseop So, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Phylogenomic Analyses of a Clade Within the Family Flavobacteriaceae Suggest Taxonomic Reassignments of Species of the Genera Algibacter, Hyunsoonleella, Jejuia, and Flavivirga, and the Proposal of Pseudalgibacter gen. nov. and Pseudalgibacter alginicilyt
Miao Li, Ling-Zhi Hou, Xing-Hao Xu, Xiao-Xiao Wang, Ming-Can Zheng, Yan-Jiao Zhang, Ang Liu
Current Microbiology.2021; 78(8): 3277. CrossRef - Description of antibiotic-producing novel bacteria Paraburkholderia antibiotica sp. nov. and Paraburkholderia polaris sp. nov.
Ram Hari Dahal, Jungmin Kim, Dhiraj Kumar Chaudhary, Dong-Uk Kim, Jaisoo Kim
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Thiomicrorhabdus sediminis sp. nov. and Thiomicrorhabdus xiamenensis sp. nov., novel sulfur-oxidizing bacteria isolated from coastal sediments and an emended description of the genus Thiomicrorhabdus
Xuewen Liu, Baoping Chen, Qiliang Lai, Zongze Shao, Lijing Jiang
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Sanguibacter suaedae sp. nov., isolated from the root of Suaeda aralocaspica in north-west PR China
Qin Ma, Rui-Feng Lei, Yu-Qian Li, Dilireba Abudourousuli, Zulihumaer Rouzi, Muyesaier Aosiman, Fang Liu, Yang-Yang Liu, Deng-Di An, Wen-Jun Li
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Algibacillus agarilyticus gen. nov., sp. nov., isolated from the surface of the red algae Gelidium amansii
Xue Meng, Ya-Qi Chang, Huan Wang, Zong-Jun Du
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
'Candidatus Phytoplasma sacchari’, a novel taxon - associated with Sugarcane Grassy Shoot (SCGS) disease
Kiran Kirdat, Bhavesh Tiwarekar, Vipool Thorat, Shivaji Sathe, Yogesh Shouche, Amit Yadav
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Bruguierivorax albus gen. nov. sp. nov. Isolated from Mangrove Sediment and Proposal of Bruguierivoracaceae fam. nov
Mi Li, Kai Liu, Yonghong Liu, Chenghai Gao, Xiangxi Yi
Current Microbiology.2021; 78(2): 856. CrossRef - Uliginosibacterium aquaticum sp. nov., Isolated from a Freshwater Lake
Jaeho Song, Mirae Kim, Miri S. Park, Yochan Joung, Ilnam Kang, Jang-Cheon Cho
Current Microbiology.2021; 78(9): 3381. CrossRef -
Nonlabens ponticola sp. nov., isolated from seawater and reclassification of Nonlabens sediminis as a later heterotypic synonym of Nonlabens tegetincola
Ye Lin Seo, Jaejoon Jung, Chi-une Song, Yong Min Kwon, Hye Su Jung, Seong-il Eyun, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Thermosipho ferrireducens sp.nov., an anaerobic thermophilic iron(III)-reducing bacterium isolated from a deep-sea hydrothermal sulfide deposits
Yao Chen, Yang He, Zongze Shao, Xiqiu Han, Danling Chen, Jian Yang, Xiang Zeng
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Peteryoungia gen. nov. with four new species combinations and description of Peteryoungia desertarenae sp. nov., and taxonomic revision of the genus Ciceribacter based on phylogenomics of Rhizobiaceae
Praveen Rahi, Mitesh Khairnar, Ashwini Hagir, Avinash Narayan, Kunal R. Jain, Datta Madamwar, Aabeejjeet Pansare, Yogesh Shouche
Archives of Microbiology.2021; 203(6): 3591. CrossRef -
Brevilactibacter coleopterorum sp. nov., isolated from the intestine of the dark diving beetle Hydrophilus acuminatus, and Weissella coleopterorum sp. nov., isolated from the intestine of the diving beetle Cybister lewisianus
Dong-Wook Hyun, June-Young Lee, Hojun Sung, Pil Soo Kim, Yun-Seok Jeong, Jae-Yun Lee, Ji-Hyun Yun, Jee-Won Choi, Jeong Eun Han, So-Yeon Lee, Euon Jung Tak, Hyun Sik Kim, Jin-Woo Bae
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Crassaminicella thermophila sp. nov., a moderately thermophilic bacterium isolated from a deep-sea hydrothermal vent chimney and emended description of the genus Crassaminicella
Xue-Gong Li, Jin Lin, Shi-Jie Bai, Jie Dai, Ze-Xi Jiao, Hong-Zhi Tang, Xiao-Qing Qi, Wei-Jia Zhang, Min Liu, Jian-Sheng Xu, Long-Fei Wu
International Journal of Systematic and Evolutionary Microbiology.2021;[Epub] CrossRef - Isoptericola sediminis sp. nov., Isolated from Chilika Lagoon
Dhanesh Kumar, Jagadeeshwari U., Krishnaiah A., Suresh G., Ch. Sasikala, Ch. Venkata Ramana
Current Microbiology.2021; 78(2): 848. CrossRef - “Candidatus Laterigemmans baculatus” gen. nov. sp. nov., the first representative of rod shaped planctomycetes with lateral budding in the family Pirellulaceae
Dhanesh Kumar, Gaurav Kumar, Uppada Jagadeeshwari, Chintalapati Sasikala, Chintalapati Venkata Ramana
Systematic and Applied Microbiology.2021; 44(2): 126188. CrossRef - Rahnella laticis sp. nov. and Rahnella contaminans sp. nov., and emended description of the genus Rahnella
Dabin Jeon, In Seop Kim, Soon Dong Lee
International Journal of Systematic and Evolutionary Microbiology.2021;[Epub] CrossRef - Proposal of Thermoactinomyces mirandus sp. nov., a filamentous, anaerobic bacterium isolated from a biogas plant
Mira Mutschlechner, Nina Lackner, Rudolf Markt, Willi Salvenmoser, Christopher A. Dunlap, Andreas O. Wagner
Antonie van Leeuwenhoek.2021; 114(1): 45. CrossRef - Enrichment and physiological characterization of a novel comammox Nitrospira indicates ammonium inhibition of complete nitrification
Dimitra Sakoula, Hanna Koch, Jeroen Frank, Mike S M Jetten, Maartje A H J van Kessel, Sebastian Lücker
The ISME Journal.2021; 15(4): 1010. CrossRef -
Pontixanthobacter rizhaonensis sp. nov., a marine bacterium isolated from surface seawater of the Yellow Sea, and proposal of Pseudopontixanthobacter gen. nov., Pseudopontixanthobacter confluentis comb. nov. and Pseudopontixanthobacter sedimi
Ang Liu, Qing-Jie Xue, Shi-Gen Li, Yan-Jiao Zhang
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Burkholderia species in human infections in Mexico: Identification of B. cepacia, B. contaminans, B. multivorans, B. vietnamiensis,B. pseudomallei and a new Burkholderia species
Georgina Meza-Radilla, Violeta Larios-Serrato, Rigoberto Hernández-Castro, J. Antonio Ibarra, Paulina Estrada-de los Santos, Yunn-Hwen Gan
PLOS Neglected Tropical Diseases.2021; 15(6): e0009541. CrossRef -
Chryseobacterium caseinilyticum sp. nov., a casein hydrolyzing bacterium isolated from rice plant and emended description of Chryseobacterium piscicola
Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Minchung Kang, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Genome-Based Taxonomic Rearrangement of the Order Geobacterales Including the Description of Geomonas azotofigens sp. nov. and Geomonas diazotrophica sp. nov.
Zhenxing Xu, Yoko Masuda, Xueding Wang, Natsumi Ushijima, Yutaka Shiratori, Keishi Senoo, Hideomi Itoh
Frontiers in Microbiology.2021;[Epub] CrossRef - Description of Ornithinimicrobium ciconiae sp. nov., and Ornithinimicrobium avium sp. nov., isolated from the faeces of the endangered and near-threatened birds
So-Yeon Lee, Hojun Sung, Pil Soo Kim, Hyun Sik Kim, Jae-Yun Lee, June-Young Lee, Yun-Seok Jeong, Euon Jung Tak, Jeong Eun Han, Dong-Wook Hyun, Jin-Woo Bae
Journal of Microbiology.2021; 59(11): 978. CrossRef - CAZymes in Maribacter dokdonensis 62–1 From the Patagonian Shelf: Genomics and Physiology Compared to Related Flavobacteria and a Co-occurring Alteromonas Strain
Laura A. Wolter, Maximilian Mitulla, Jovan Kalem, Rolf Daniel, Meinhard Simon, Matthias Wietz
Frontiers in Microbiology.2021;[Epub] CrossRef - Gephyromycinifex aptenodytis gen. nov., sp. nov., isolated from gut of Antarctic emperor penguin Aptenodytes forsteri
Wen-Zhuo Zhu, Ya-Ming Ge, Hui-Min Gao, Jun Dai, Xiao-Ling Zhang, Qiao Yang
Antonie van Leeuwenhoek.2021; 114(12): 2003. CrossRef -
Roseibium litorale sp. nov., isolated from a tidal flat sediment and proposal for the reclassification of Labrenzia polysiphoniae as Roseibium polysiphoniae comb. nov.
Yang Liu, Tao Pei, Juan Du, Meijie Chao, Ming-Rong Deng, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Enrichment of novel Verrucomicrobia, Bacteroidetes, and Krumholzibacteria in an oxygen‐limited methane‐ and iron‐fed bioreactor inoculated with Bothnian Sea sediments
Paula Dalcin Martins, Anniek de Jong, Wytze K. Lenstra, Niels A. G. M. van Helmond, Caroline P. Slomp, Mike S. M. Jetten, Cornelia U. Welte, Olivia Rasigraf
MicrobiologyOpen.2021;[Epub] CrossRef - Description of Acinetobacter kanungonis sp. nov., based on phylogenomic analysis
Lipika Das, Sushanta Deb, Subrata K. Das
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Inhella proteolytica sp. nov. and Inhella gelatinilytica sp. nov., two novel species of the genus Inhella isolated from aquaculture water
Yang Liu, Tao Pei, Juan Du, Ming-Rong Deng, Honghui Zhu
Archives of Microbiology.2021; 203(6): 3191. CrossRef -
Variimorphobacter saccharofermentans gen. nov., sp. nov., a new member of the family Lachnospiraceae, isolated from a maize-fed biogas fermenter
Regina Rettenmaier, Nils Thieme, Johanna Streubel, Luca Di Bello, Marie-Louise Kowollik, Liren Huang, Irena Maus, Andreas Klingl, Wolfgang Liebl, Vladimir V. Zverlov
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Crateriforma spongiae sp. nov., isolated from a marine sponge and emended description of the genus “Crateriforma”
Gaurav Kumar, Dhanesh Kumar, U. Jagadeeshwari, P. K. Sreya, A. Shabbir, Ch. Sasikala, Ch. V. Ramana
Antonie van Leeuwenhoek.2021; 114(4): 341. CrossRef - Characterization of Sulfurimonas hydrogeniphila sp. nov., a Novel Bacterium Predominant in Deep-Sea Hydrothermal Vents and Comparative Genomic Analyses of the Genus Sulfurimonas
Shasha Wang, Lijing Jiang, Qitao Hu, Liang Cui, Bitong Zhu, Xiaoteng Fu, Qiliang Lai, Zongze Shao, Suping Yang
Frontiers in Microbiology.2021;[Epub] CrossRef -
Elizabethkingia argenteiflava sp. nov., isolated from the pod of soybean, Glycine max
Jun-Hee Hwang, Jihyeon Kim, Jae-heon Kim, SangJoon Mo
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Clostridium fessum sp. nov., isolated from human faeces
Boram Seo, Kyungchan Jeon, Inwoo Baek, Yung Mi Lee, Kiwoon Baek, GwangPyo Ko
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - A sulfate-reducing bacterial genus, Desulfosediminicola gen. nov., comprising two novel species cultivated from tidal-flat sediments
Jaeho Song, Juchan Hwang, Ilnam Kang, Jang-Cheon Cho
Scientific Reports.2021;[Epub] CrossRef - Hyphomicrobium album sp. nov., isolated from mountain soil and emended description of genus Hyphomicrobium
Qing Xu, Yuxiao Zhang, Xing Wang, Gejiao Wang
Archives of Microbiology.2021; 203(10): 5931. CrossRef -
Bowmanella yangjiangensis sp. nov. and Amphritea pacifica sp. nov., isolated from mariculture fishponds in China
Zhipeng Cai, Huibin Lu, Youfeng Qian, Letian Chen, Meiying Xu
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Dyella telluris sp. nov. and Dyella acidiphila sp. nov., isolated from forest soil of Dinghushan Biosphere Reserve, China
Tao Huang, Jia-cheng Fu, Shuo-han Dong, Qiu-mei Zhang, Ting-ting Wu, Li-hong Qiu
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Noviherbaspirillum pedocola sp. nov., isolated from oil-contaminated experimental soil
Dhiraj Kumar Chaudhary, Ram Hari Dahal, Yongseok Hong
Archives of Microbiology.2021; 203(6): 3071. CrossRef - Reclassification of Facklamia ignava, Facklamia sourekii and Facklamia tabacinasalis as Falseniella ignava gen. nov., comb. nov., Hutsoniella sourekii gen. nov., comb. nov., and Ruoffia tabacinasalis gen. nov., comb. nov., and description of Ruoffia halot
Rashmi Fotedar, Krithivasan Sankaranarayanan, Matthew E. Caldwell, Aisha Zeyara, Amina Al Malki, Ridhima Kaul, Hamad Al Shamari, Mohammad Ali, Masoud Al Marri, Paul A. Lawson
Antonie van Leeuwenhoek.2021; 114(8): 1181. CrossRef - Reconstructing Draft Genomes Using Genome Resolved Metagenomics Reveal Arsenic Metabolizing Genes and Secondary Metabolites in Fresh Water Lake in Eastern India
Samrat Ghosh, Aditya Narayan Sarangi, Mayuri Mukherjee, Deeksha Singh, Madduluri Madhavi, Sucheta Tripathy
Bioinformatics and Biology Insights.2021;[Epub] CrossRef - Xyloglucan processing machinery in Xanthomonas pathogens and its role in the transcriptional activation of virulence factors
Plinio S. Vieira, Isabela M. Bonfim, Evandro A. Araujo, Ricardo R. Melo, Augusto R. Lima, Melissa R. Fessel, Douglas A. A. Paixão, Gabriela F. Persinoti, Silvana A. Rocco, Tatiani B. Lima, Renan A. S. Pirolla, Mariana A. B. Morais, Jessica B. L. Correa, L
Nature Communications.2021;[Epub] CrossRef - Mesobacillus aurantius sp. nov., isolated from an orange-colored pond near a solar saltern
Anusha Rai, N. Smita, A. Shabbir, U. Jagadeeshwari, T. Keertana, Ch. Sasikala, Ch. V. Ramana
Archives of Microbiology.2021; 203(4): 1499. CrossRef -
Paenibacillus foliorum sp. nov., Paenibacillus phytohabitans sp. nov., Paenibacillus plantarum sp. nov., Paenibacillus planticolens sp. nov., Paenibacillus phytorum sp. nov. and Paenibacillus germinis sp. nov., isolated from the Arabidopsis t
Shan Shan Qi, Margo Cnockaert, Aurélien Carlier, Peter A. Vandamme
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Marinobacter orientalis sp. nov., a thiosulfate-oxidizing bacterium isolated from a marine solar saltern
Feng-Bai Lian, Xu-Yang Chen, Shan Jiang, Guang-Yu Li, Zong-Jun Du
Antonie van Leeuwenhoek.2021; 114(6): 765. CrossRef - Cold-Active Shewanella glacialimarina TZS-4T nov. Features a Temperature-Dependent Fatty Acid Profile and Putative Sialic Acid Metabolism
Muhammad Suleman Qasim, Mirka Lampi, Minna-Maria K. Heinonen, Berta Garrido-Zabala, Dennis H. Bamford, Reijo Käkelä, Elina Roine, Leif Peter Sarin
Frontiers in Microbiology.2021;[Epub] CrossRef - Descriptions of Roseiconus nitratireducens gen. nov. sp. nov. and Roseiconus lacunae sp. nov.
Dhanesh Kumar, Gaurav Kumar, Jagadeeshwari Uppada, Shabbir Ahmed, Chintalapati Sasikala, Chintalapati Venkata Ramana
Archives of Microbiology.2021; 203(2): 741. CrossRef - Comparative Genome Analysis of Bacillus amyloliquefaciens Focusing on Phylogenomics, Functional Traits, and Prevalence of Antimicrobial and Virulence Genes
Hualin Liu, Vimalkumar Prajapati, Shobha Prajapati, Harsh Bais, Jianguo Lu
Frontiers in Genetics.2021;[Epub] CrossRef - Taibaiella lutea sp. nov., Isolated from Ubiquitous Weedy Grass
Geeta Chhetri, Inhyup Kim, Jiyoun Kim, Minchung Kang, Taegun Seo
Current Microbiology.2021; 78(7): 2799. CrossRef - Marinobacter shengliensis subsp. alexandrii Subsp. Nov., Isolated from Cultivable Phycosphere Microbiota of Highly Toxic Dinoflagellate Alexandrium catenella LZT09 and Description of Marinobacter shengliensis Subsp. shengliensis Subsp. Nov
Xi Yang, Rong Xiang, Nurhezreen Md Iqbal, Yu-Han Duan, Xiao-Ai Zhang, Lei Wang, Lin-Zeng Yu, Jia-Zhou Li, Ming-Fei Sun, Qiao Yang, Chun-Tian Zheng, Shen-Quan Liao
Current Microbiology.2021; 78(4): 1648. CrossRef - Assessment of Erythrobacter Species Diversity through Pan-Genome Analysis with Newly Isolated Erythrobacter sp. 3-20A1M
Sang-Hyeok Cho, Yujin Jeong, Eunju Lee, So-Ra Ko, Chi-Yong Ahn, Hee-Mock Oh, Byung-Kwan Cho, Suhyung Cho
Journal of Microbiology and Biotechnology.2021; 31(4): 601. CrossRef - Phylotaxogenomics for the Reappraisal of the Genus Roseomonas With the Creation of Six New Genera
Anusha Rai, Uppada Jagadeeshwari, Gupta Deepshikha, Nandardhane Smita, Chintalapati Sasikala, Chintalapati Venkata Ramana
Frontiers in Microbiology.2021;[Epub] CrossRef - Zafaria cholistanensis gen. nov. sp. nov., a moderately thermotolerant and halotolerant actinobacterium isolated from Cholistan desert soil of Pakistan
Arshia Amin, Iftikhar Ahmed, Nauman Khalid, Peter Schumann, Hans-Jürgen Busse, Inam Ullah Khan, Ahmad Ali, Shuai Li, Wen-Jun Li
Archives of Microbiology.2021; 203(4): 1717. CrossRef -
Sphingomonas sabuli sp. nov., a carotenoid-producing bacterium isolated from beach sand
Minchung Kang, Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Gut microbiome drives individual memory variation in bumblebees
Li Li, Cwyn Solvi, Feng Zhang, Zhaoyang Qi, Lars Chittka, Wei Zhao
Nature Communications.2021;[Epub] CrossRef - Qipengyuania soli sp. nov., Isolated from Mangrove Soil
Yang Liu, Tao Pei, Ming-Rong Deng, Honghui Zhu
Current Microbiology.2021; 78(7): 2806. CrossRef - Description of Microbacterium luteum sp. nov., Microbacterium cremeum sp. nov., and Microbacterium atlanticum sp. nov., three novel C50 carotenoid producing bacteria
Fuquan Xie, Siwen Niu, Xihuang Lin, Shengxiang Pei, Li Jiang, Yun Tian, Gaiyun Zhang
Journal of Microbiology.2021; 59(10): 886. CrossRef -
Arthrobacter cheniae and Arthrobacter frigidicola sp. nov., isolated from a glacier
Lei-Lei Yang, Hong-Can Liu, Qing Liu, Yu-Hua Xin
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Stappia albiluteola sp. nov., isolated from marine sediment
Shan Jiang, You-Yang Sun, Feng-Bai Lian, Xiao-Kui Zhang, Zong-Jun Du
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Flagellatimonas centrodinii gen. nov., sp. nov., a novel member of the family Nevskiaceae isolated from toxin-producing dinoflagellate Centrodinium punctatum
Yue Jiang, Lingmin Jiang, Yuxin Peng, Ki-Hyun Kim, Hyeon Ho Shin, Young-Min Kim, Jiyoung Lee, Zhun Li
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Adlercreutzia hattorii sp. nov., an equol non-producing bacterium isolated from human faeces
Mitsuo Sakamoto, Nao Ikeyama, Masahiro Yuki, Takumi Murakami, Hiroshi Mori, Takao Iino, Moriya Ohkuma
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Anaerosporobacter faecicola sp. nov. isolated from faeces of Korean cow
Seung-Hyeon Choi, Jam-Eon Park, Ji Young Choi, Ji-Sun Kim, Se Won Kang, Jiyoung Lee, Mi-Kyung Lee, Jung-Sook Lee, Ju Huck Lee, Hyunjung Jung, Tai-Young Hur, Hyeun Bum Kim, Ju-Hoon Lee, Jae-Kyung Kim, Seung-Hwan Park
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Marixanthomonas spongiae sp. nov., isolated from marine sponge
Lingping Zhuang, Haiyue Pang, Li Xu, Dan Chen
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Alkalihalobacterium elongatum gen. nov. sp. nov.: An Antibiotic-Producing Bacterium Isolated From Lonar Lake and Reclassification of the Genus Alkalihalobacillus Into Seven Novel Genera
Amaraja Joshi, Sonia Thite, Prachi Karodi, Neetha Joseph, Tushar Lodha
Frontiers in Microbiology.2021;[Epub] CrossRef -
Aliidiomarina indica sp. nov., isolated from deep seawater
Lei Song, Hongcan Liu, Ying Huang, Xin Dai, Yuguang Zhou
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - First description outside Europe of the emergent pathogen Vibrio europaeus in shellfish aquaculture
Rodrigo Rojas, Andrés Blanco-Hortas, Hannah Kehlet-Delgado, Alberto Lema, Claudio D. Miranda, Jaime Romero, Paulino Martínez, Juan L. Barja, Javier Dubert
Journal of Invertebrate Pathology.2021; 180: 107542. CrossRef -
Chryseoglobus indicus sp. nov., isolated from deep sea water
Shengxiang Pei, Fuquan Xie, Wenjing Wang, Shuang Zhang, Gaiyun Zhang
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Sphingosinicella flava sp. nov., indole acetic acid producing bacteria isolated from maize field soil
Geeta Chhetri, Minchung Kang, Jiyoun Kim, Inhyup Kim, Yoonseop So, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Duganella aceris sp. nov., isolated from tree sap and proposal to transfer of Rugamonas aquatica and Rugamonas rivuli to the genus Duganella as Duganella aquatica comb. nov., with the emended description of the genus Rugamonas
Dabin Jeon, In Seop Kim, Hanna Choe, Ji-Sun Kim, Soon Dong Lee
Archives of Microbiology.2021; 203(6): 2843. CrossRef - Hymenobacter puniceus sp. nov., radiation resistant bacteria isolated from soil in South Korea
Yuna Park, Soohyun Maeng, Tuvshinzaya Damdintogtokh, Minji Bang, Hyejin Oh, Sathiyaraj Srinivasan, Myung Kyum Kim
Antonie van Leeuwenhoek.2021; 114(10): 1647. CrossRef -
Tessaracoccus coleopterorum sp. nov., isolated from the intestine of the dark diving beetle, Hydrophilus acuminatus
Dong-Wook Hyun, Hojun Sung, Pil Soo Kim, Jae-Yun Lee, Yun-Seok Jeong, Ji-Hyun Yun, Jee-Won Choi, Jeong Eun Han, So-Yeon Lee, Euon Jung Tak, June-Young Lee, Hyun Sik Kim, Jin-Woo Bae
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Limnohabitans radicicola sp. nov., a slow-growing bacterium isolated from rhizosphere of rice plant and emended description of the genus Limnohabitans
Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Minchung Kang, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Distribution and Diversity of Nisin Producing LAB in Fermented Food
Basista Rabina Sharma, Dharana Jayant, Kumari Rajshee, Yashika Singh, Prakash M. Halami
Current Microbiology.2021; 78(9): 3430. CrossRef - Chryseobacterium cheonjiense sp. nov., isolated from forest soil
Dhiraj Kumar Chaudhary, Ram Hari Dahal, Dong-Uk Kim, Jaisoo Kim
Archives of Microbiology.2021; 203(2): 725. CrossRef -
Undibacterium baiyunense sp. nov., Undibacterium curvum sp. nov., Undibacterium fentianense sp. nov., Undibacterium flavidum sp. nov., Undibacterium griseum sp. nov., Undibacterium hunanense sp. nov., Undibacterium luofuense sp. nov., Undibac
Huibin Lu, Fei Liu, Tongchu Deng, Meiying Xu
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Flavobacterium franklandianum sp. nov. and Flavobacterium gawalongense sp. nov., isolated from glaciers on the Tibetan Plateau
Qing Liu, Hong-Can Liu, Lei-Lei Yang, Yu-Hua Xin
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Sediminihaliea albiluteola gen. nov., sp. nov., a new member of the family Halieaceae, isolated from marine sediment
Shan Jiang, Feng-Bai Lian, You-Yang Sun, Xiao-Kui Zhang, Zong-Jun Du
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Fusibacter ferrireducens sp. nov., an anaerobic, Fe(Ⅲ)- and sulphur-reducing bacterium isolated from mangrove sediment
Donghua Qiu, Xiang Zeng, Lingyu Zeng, Guangyu Li, Zongze Shao
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Geothermobacter hydrogeniphilus sp. nov., a mesophilic, iron(III)-reducing bacterium from seafloor/subseafloor environments in the Pacific Ocean, and emended description of the genus Geothermobacter
Ileana Pérez-Rodríguez, Jessica K. Choi, Karla Abuyen, Madeline Tyler, Cynthia Ronkowski, Eric Romero, Anthony Trujillo, Jason Tremblay, Isabella Viney, Pratixaben Savalia, Jan P. Amend
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Oryzicola mucosus gen. nov., sp. nov., a novel slime producing bacterium belonging to the family Phyllobacteriaceae isolated from the rhizosphere of rice plants
Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Minchung Kang, Yoonseop So, Taegun Seo
Antonie van Leeuwenhoek.2021; 114(11): 1925. CrossRef -
Ostreibacterium oceani gen. nov., sp. nov., isolated from oyster, and description of Ostreibacteriaceae fam. nov.
Chao-Nan Wang, Feng-Qing Wang, Yuan Liu, Ming-Yi Wang, Zong-Jun Du
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Salegentibacter maritimus sp. nov., isolated from marine coastal sediment
Feng-Bai Lian, Shan Jiang, Ke-Lei Zhu, Dan-Dan Shang, Jing Zhang, Zong-Jun Du
Systematic and Applied Microbiology.2021; 44(3): 126209. CrossRef -
Solimonas marina sp. nov., isolated from deep seawater of the Pacific Ocean
Xiupian Liu, Qiliang Lai, Fengqin Sun, Yaping Du, Yingbao Gai, Guangyu Li, Zongze Shao
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Phylo-taxogenomics of the genus Tautonia with descriptions of Tautonia marina sp. nov., Tautonia rosea sp. nov., and emended description of the genus
Kumar Gaurav, Dhanesh Kumar, U. Jagadeeshwari, A. Shabbir, Ch. Sasikala, Ch.V. Ramana
Systematic and Applied Microbiology.2021; 44(4): 126229. CrossRef - Reclassification of Algibacter wandonensis as a Later Heterotypic Synonym of Algibacter lectus Based on Whole-Genome Sequence Analysis
Ang Liu, Hui Wang, Yuan-Yuan Yang, Qing-Jie Xue, Xiu-Zhen Li
Current Microbiology.2021; 78(3): 1034. CrossRef -
Vibrio ziniensis sp. nov., isolated from mangrove sediments
Jie Wu, Wu Qu, Qiliang Lai, Shengxiang Pei, Tianyou Zhang, Yan Zhuang, Zhuhua Chan, Runying Zeng
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Parasphingopyxis marina sp. nov. isolated from coastal seawater
Soo-Yeon Choi, Ji-Sung Oh, Dong-Hyun Roh
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Kushneria phosphatilytica sp. nov., a phosphate-solubilizing bacterium isolated from a solar saltern
Guang-Xun Du, Ling-Yun Qu, Xu-Guang Hong, Cheng-Hua Li, De-Wen Ding, Ping Gao, Qin-Zeng Xu
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Phylogenomic Analyses of the Genus Pseudomonas Lead to the Rearrangement of Several Species and the Definition of New Genera
Zaki Saati-Santamaría, Ezequiel Peral-Aranega, Encarna Velázquez, Raúl Rivas, Paula García-Fraile
Biology.2021; 10(8): 782. CrossRef - Marinobacter alexandrii sp. nov., a novel yellow-pigmented and algae growth-promoting bacterium isolated from marine phycosphere microbiota
Qiao Yang, Qi Feng, Bao-ping Zhang, Jia-jun Gao, Zhi Sheng, Qi-ping Xue, Xiao-ling Zhang
Antonie van Leeuwenhoek.2021; 114(6): 709. CrossRef - Multi-Omics Characterization of Host-Derived Bacillus spp. Probiotics for Improved Growth Performance in Poultry
Dwi Susanti, Alyssa Volland, Nilesh Tawari, Nielson Baxter, Dharanesh Gangaiah, Germán Plata, Akshitha Nagireddy, Troy Hawkins, Shrinivasrao P. Mane, Arvind Kumar
Frontiers in Microbiology.2021;[Epub] CrossRef -
Salibaculum halophilum gen. nov., sp. nov. and Salibaculum griseiflavum sp. nov., in the family Rhodobacteraceae
Ke-Lei Zhu, Xiao-Qun Wang, Tian-Shu Zhang, Dan-Dan Shang, Zong-Jun Du
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Aquabacterium terrae sp. nov., isolated from soil
Ram Hari Dahal, Ji Yeon Han, Hyosun Lee, Dhiraj Kumar Chaudhary, Dong-Uk Kim
Archives of Microbiology.2021; 203(6): 3183. CrossRef - Safety Assessment of Lactiplantibacillus (formerly Lactobacillus) plantarum Q180
Yoo Jin Kwon, Byung Hee Chun, Hye Su Jung, Jaeryang Chu, Hyunchae Joung, Sung Yurb Park, Byoung Kook Kim, Che Ok Jeon
Journal of Microbiology and Biotechnology.2021; 31(10): 1420. CrossRef -
Collimonas silvisoli sp. nov. and Collimonas humicola sp. nov., two novel species isolated from forest soil
Jiali Li, Mingkai Pan, Xianjiao Zhang, Yang Zhou, Guang-Da Feng, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Flavobacterium tagetis sp. nov., a novel urea-hydrolysing bacterium isolated from the roots of Tagetes patula
Geeta Chhetri, Inhyup Kim, Minchung Kang, Jiyoun Kim, Yoonseop So, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Croceicoccus bisphenolivorans sp. nov., a bisphenol A-degrading bacterium isolated from seawater
Jiangwei Li, Anyi Hu, Min Lv, Chang-Ping Yu
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Vineibacter terrae gen. nov., sp. nov., an ammonium-assimilating and nitrate-reducing bacterium isolated from vineyard soil
Shih-Yao Lin, Asif Hameed, Chia-Fang Tsai, Chiu-Chung Young
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Geomesophilobacter sediminis gen. nov., sp. nov., Geomonas propionica sp. nov. and Geomonas anaerohicana sp. nov., three novel members in the family Geobacterecace isolated from river sediment and paddy soil
Zhengcheng Zhang, Zhenxing Xu, Yoko Masuda, Xueding Wang, Natsumi Ushijima, Yutaka Shiratori, Keishi Senoo, Hideomi Itoh
Systematic and Applied Microbiology.2021; 44(5): 126233. CrossRef - Rouxiella aceris sp. nov., isolated from tree sap and the emended description of the genus Rouxiella
Soon Dong Lee, Hong Lim Yang, In Seop Kim
Antonie van Leeuwenhoek.2021; 114(7): 1013. CrossRef -
Pseudomarimonas arenosa gen. nov., sp. nov. isolated from marine sand
Veeraya Weerawongwiwat, Jong-Hwa Kim, Jung-Hoon Yoon, Jung-Sook Lee, Ampaitip Sukhoom, Wonyong Kim
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Chitinophaga fulva sp. nov., isolated from forest soil
Ram Hari Dahal, Dhiraj Kumar Chaudhary, Dong-Uk Kim, Jaisoo Kim
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Horizontal Gene Transfer of Genes Encoding Copper-Containing Membrane-Bound Monooxygenase (CuMMO) and Soluble Di-iron Monooxygenase (SDIMO) in Ethane- and Propane-Oxidizing
Rhodococcus
Bacteria
Bin Zou, Ying Huang, Pan-Pan Zhang, Xiao-Ming Ding, Huub J. M. Op den Camp, Zhe-Xue Quan, Alfons J. M. Stams
Applied and Environmental Microbiology.2021;[Epub] CrossRef -
Arachidicoccus soli sp. nov., a bacterium isolated from soil
Shin Ae Lee, Tae-Wan Kim, Mee-Kyung Sang, Jaekyeong Song, Soon-Wo Kwon, Hang-Yeon Weon
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Quantitative Real-Time PCR Assay for the Detection of Pectobacterium parmentieri, a Causal Agent of Potato Soft Rot
Anna A. Lukianova, Peter V. Evseev, Alexander A. Stakheev, Irina B. Kotova, Sergey K. Zavriev, Alexander N. Ignatov, Konstantin A. Miroshnikov
Plants.2021; 10(9): 1880. CrossRef - Phylogenomic Framework for Taxonomic Delineation of Paracoccus spp. and Exploration of Core-Pan Genome
Akshita Puri, Abhay Bajaj, Sukanya Lal, Yogendra Singh, Rup Lal
Indian Journal of Microbiology.2021; 61(2): 180. CrossRef - Echinicola arenosa sp. nov., isolated from marine sand
Jihye Baek, Veeraya Weerawongwiwat, Jong-Hwa Kim, Jung-Hoon Yoon, Jung-Sook Lee, Ampaitip Sukhoom, Wonyong Kim
Archives of Microbiology.2021; 203(9): 5675. CrossRef - Cold-shock gene cspC in the genome of Massilia polaris sp. nov. revealed cold-adaptation
Ram Hari Dahal, Dhiraj Kumar Chaudhary, Dong-Uk Kim, Jaisoo Kim
Antonie van Leeuwenhoek.2021; 114(8): 1275. CrossRef - Complete genome sequence of Streptomyces sp. HSG2 from rhizosphere soil of mangrove in Qingmei Gang, Sanya
Shengxiang Pei, Siwen Niu, Fuquan Xie, Shuang Zhang, Wenjing Wang, Gaiyun Zhang
Archives of Microbiology.2021; 203(6): 3519. CrossRef - Martelella alba sp. nov., isolated from mangrove rhizosphere soil within the Beibu Gulf
Mi Li, Chenghai Gao, Yuyao Feng, Kai Liu, Pei Cao, Yonghong Liu, Xiangxi Yi
Archives of Microbiology.2021; 203(4): 1779. CrossRef -
Photobacterium arenosum sp. nov., isolated from marine sediment sand
Veeraya Weerawongwiwat, Seokmin Yoon, Jong-Hwa Kim, Jung-Hoon Yoon, Jung Sook Lee, Ampaitip Sukhoom, Wonyong Kim
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Oricola thermophila sp. nov., a marine bacterium isolated from tidal flat sediment and emended description of the genus Oricola Hameed et al. 2015
Sung-Hyun Yang, Mi-Jeong Park, Kae Kyoung Kwon
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Zeimonas arvi gen. nov., sp. nov., of the family Burkholderiaceae, harboring biphenyl- and phenolic acid-metabolizing genes, isolated from a long-term ecological research field
Shih-Yao Lin, Asif Hameed, Chia-Fang Tsai, Chiu-Chung Young
Antonie van Leeuwenhoek.2021; 114(12): 2101. CrossRef -
Chitinilyticum piscinae sp. nov., isolated from aquaculture water
Tao Pei, Juan Du, Yang Liu, Ming-Rong Deng, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Usitatibacter rugosus gen. nov., sp. nov. and Usitatibacter palustris sp. nov., novel members of Usitatibacteraceae fam. nov. within the order Nitrosomonadales isolated from soil
Selma Vieira, Katharina J. Huber, Meina Neumann-Schaal, Alicia Geppert, Manja Luckner, Gerhard Wanner, Jörg Overmann
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Caenimonas soli sp. nov., isolated from soil
Ram Hari Dahal, Hyosun Lee, Dhiraj Kumar Chaudhary, Dae-Young Kim, Jigwan Son, Jaisoo Kim, Jong-Ok Ka, Dong-Uk Kim
Archives of Microbiology.2021; 203(3): 1123. CrossRef - Coprobacter secundus subsp. similis subsp. nov. and Solibaculum mannosilyticum gen. nov., sp. nov., isolated from human feces
Mitsuo Sakamoto, Nao Ikeyama, Atsushi Toyoda, Takumi Murakami, Hiroshi Mori, Sho Morohoshi, Tadao Kunihiro, Takao Iino, Moriya Ohkuma
Microbiology and Immunology.2021; 65(6): 245. CrossRef -
Mesobacillus harenae sp. nov., isolated from the sandy soil of a cold desert
Gaosen Zhang, Ruiqi Yang, Tuo Chen, Binglin Zhang, Hui Yang, Xiukun Wu, Haining Gao, Wei Zhang, Guangxiu Liu
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Pedobacter riviphilus sp. nov., isolated from stream sediment
Hong Sik Im, Yochan Joung, Sang-Seob Lee
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Paraliobacillus salinarum sp. nov., isolated from saline soil in Yingkou, China
Ya-Lin Yin, Fang-Ling Li, Xian-Yuan Du, Ya-Xi Zhang, Lei Wang
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Leucobacter coleopterorum sp. nov., Leucobacter insecticola sp. nov., and Leucobacter viscericola sp. nov., isolated from the intestine of the diving beetles, Cybister brevis and Cybister lewisianus, and emended description of the genus Leucobacter
Dong-Wook Hyun, Hojun Sung, Pil Soo Kim, Ji-Hyun Yun, Jin-Woo Bae
Journal of Microbiology.2021; 59(4): 360. CrossRef - Brevibacterium limosum sp. nov., Brevibacterium pigmenatum sp. nov., and Brevibacterium atlanticum sp. nov., three novel dye decolorizing actinobacteria isolated from ocean sediments
Shengxiang Pei, Siwen Niu, Fuquan Xie, Wenjing Wang, Shuang Zhang, Gaiyun Zhang
Journal of Microbiology.2021; 59(10): 898. CrossRef -
Saccharobesus litoralis gen. nov., sp. nov., a novel alginate-degrading bacterium isolated from the surface of intertidal algal turf
Rosyada Amran Amrina, Go Furusawa, Nyok-Sean Lau
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Sphingopyxis microcysteis sp. nov., a novel bioactive exopolysaccharides-bearing Sphingomonadaceae isolated from the Microcystis phycosphere
Xiao-ling Zhang, Gui-xian Li, Ya-ming Ge, Nurhezreen Md Iqbal, Xi Yang, Zhen-dong Cui, Qiao Yang
Antonie van Leeuwenhoek.2021; 114(6): 845. CrossRef - Aquisphaera insulae sp. nov., a new member in the family Isosphaeraceae, isolated from the floating island of Loktak lake and emended description of the genus Aquisphaera
Gaurav Kumar, Khongsai L. Lhingjakim, Jagadeeshwari Uppada, Shabbir Ahamad, Dhanesh Kumar, Gulam Mohammad Kashif, Chintalapati Sasikala, Chintalapati Venkata Ramana
Antonie van Leeuwenhoek.2021; 114(9): 1465. CrossRef - Description of Lujinxingia vulgaris sp. nov., isolated from coastal sediment via prey-traps
Shuo Wang, Da-Shuai Mu, Guang-Yu Li, Zong-Jun Du
Antonie van Leeuwenhoek.2021; 114(11): 1805. CrossRef -
Novosphingobium olei sp. nov., with the ability to degrade diesel oil, isolated from oil-contaminated soil and proposal to reclassify Novosphingobium stygium as a later heterotypic synonym of Novosphingobium aromaticivorans
Dhiraj Kumar Chaudhary, Ram Hari Dahal, Dong-Uk Kim, Jaisoo Kim
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Pontibacter aquaedesilientis sp. nov., isolated from Jeongbang Waterfall, Jeju Island
Geeta Chhetri, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Aeromicrobium terrae sp. nov., isolated from a maize field
Shih-Yao Lin, Chia-Fang Tsai, Asif Hameed, Chiu-Chung Young
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - UBCG2: Up-to-date bacterial core genes and pipeline for phylogenomic analysis
Jihyeon Kim, Seong-In Na, Dongwook Kim, Jongsik Chun
Journal of Microbiology.2021; 59(6): 609. CrossRef - Engineering Vibrio sp. SP1 for the production of carotenoids directly from brown macroalgae
Sungwoo Park, Sung Won Cho, Yungyu Lee, Mincheol Choi, Jina Yang, Hojun Lee, Sang Woo Seo
Computational and Structural Biotechnology Journal.2021; 19: 1531. CrossRef -
Aquabacterium soli sp. nov., a novel bacterium isolated from soil under the long-term application of bifenthrin
Lina Sun, Wei Chen, Kaihua Huang, Weiguang Lyu, Xinhua Gao
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Permianibacter fluminis sp. nov., isolated from a freshwater stream
Miri S. Park, Jaeho Song, Jaeho Chang, Yochan Joung, Ilnam Kang, Jang-Cheon Cho
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Description of Cohnella zeiphila sp. nov., a bacterium isolated from maize callus cultures
Eric T. Johnson, Patrick F. Dowd, Christopher D. Skory, Christopher A. Dunlap
Antonie van Leeuwenhoek.2021; 114(1): 37. CrossRef -
Mesorhizobium microcysteis sp. nov., isolated from a culture of Microcystis aeruginosa
Jaejoon Jung, Ye Lin Seo, Kyeong Ryeol Kim, Hye Yoon Park, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Sphingobacterium micropteri sp. nov. and Sphingobacterium litopenaei sp. nov., isolated from aquaculture water
Mingxia Zhang, Anzhang Li, Shuaishuai Xu, Meng Chen, Qing Yao, Botao Xiao, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Maritimibacter alexandrii sp. nov., a New Member of Rhodobacteraceae Isolated from Marine Phycosphere
Xing Wang, Yun Ye, Fei-Fei Xu, Yu-Han Duan, Peng-Fei Xie, Qiao Yang, Xiao-Ling Zhang
Current Microbiology.2021; 78(11): 3996. CrossRef -
Mucilaginibacter glaciei sp. nov. and Mucilaginibacter pankratovii sp. nov., isolated from a glacier on the Tibetan Plateau
Lei-Lei Yang, Yu Pang, Hong-Can Liu, Yu-Hua Xin, Qing Liu
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Pedobacter endophyticus sp. nov., an endophytic bacterium isolated from Carex pumila
Yuxin Peng, Lingmin Jiang, Jiyoon Seo, Zhun Li, Hanna Choe, Jae Cheol Jeong, Suk Weon Kim, Young-Min Kim, Cha Young Kim, Jiyoung Lee
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Zongyanglinia huanghaiensis gen. nov., sp. nov., a novel denitrifying bacterium isolated from the yellow sea, and transfer of Pelagicola marinus to Zongyanglinia gen. nov. as Zongyanglinia marinus comb. nov
Lili Xu, Ang Liu, Yan-Jiao Zhang
Antonie van Leeuwenhoek.2021; 114(2): 137. CrossRef - Pyomelanin-Producing Brevundimonas vitisensis sp. nov., Isolated From Grape (Vitis vinifera L.)
Lingmin Jiang, Doeun Jeon, Jueun Kim, Chul Won Lee, Yuxin Peng, Jiyoon Seo, Ju Huck Lee, Jin Hyub Paik, Cha Young Kim, Jiyoung Lee
Frontiers in Microbiology.2021;[Epub] CrossRef -
Belnapia mucosa sp. nov. and Belnapia arida sp. nov., isolated from desert biocrust
Esther Molina-Menor, Àngela Vidal-Verdú, Leila Satari, Alba Calonge-García, Javier Pascual, Juli Peretó, Manuel Porcar
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Nocardioides donggukensis sp. nov. and Hyunsoonleella aquatilis sp. nov., isolated from Jeongbang Waterfall on Jeju Island
Inhyup Kim, Geeta Chhetri, Jiyoun Kim, Minchung Kang, Yoonseop So, Byungjo Lee, Wonhee Jang, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Yangia mangrovi sp. nov., a novel member of the Roseobacter clade isolated from mangrove soil and emended description of Yangia pacifica Dai et al. 2006
Ashish Verma, Shiva S. Sundharam, Yash Pal, Bhawana Bisht, Pooja Yadav, Srinivasan Krishnamurthi
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Draft genome of a novel methanotrophic Methylobacter sp. from the volcanic soils of Pantelleria Island
Carmen Hogendoorn, Nunzia Picone, Femke van Hout, Sophie Vijverberg, Lianna Poghosyan, Theo A. van Alen, Jeroen Frank, Arjan Pol, Antonia L. Gagliano, Mike S. M. Jetten, Walter D’Alessandro, Paola Quatrini, Huub J. M. Op den Camp
Antonie van Leeuwenhoek.2021; 114(3): 313. CrossRef - Strain-Specific Identification and In Vivo Immunomodulatory Activity of Heat-Killed Latilactobacillus sakei K040706
Kyung-Sook Chung, Jae Woong Choi, Ji-Sun Shin, Seo-Yeon Kim, Hee-Soo Han, Su-Yeon Kim, Kwang-Young Lee, Joo-Yeon Kang, Chang-Won Cho, Hee-Do Hong, Young Kyoung Rhee, Kyung-Tae Lee
Foods.2021; 10(12): 3034. CrossRef - Zophobihabitans entericus gen. nov., sp. nov., a new member of the family Orbaceae isolated from the gut of a superworm Zophobas morio
Chih-Horng Kuo, Pin-Yun Huang, Shih-Yi Sheu, Der-Shyan Sheu, Li-Cheng Jheng, Wen-Ming Chen
International Journal of Systematic and Evolutionary Microbiology.2021;[Epub] CrossRef - Description of Vagococcus coleopterorum sp. nov., isolated from the intestine of the diving beetle, Cybister lewisianus, and Vagococcus hydrophili sp. nov., isolated from the intestine of the dark diving beetle, Hydrophilus acuminatus, and emended descrip
Dong-Wook Hyun, Euon Jung Tak, Pil Soo Kim, Jin-Woo Bae
Journal of Microbiology.2021; 59(2): 132. CrossRef - Devosia aurantiaca sp. nov., Isolated from Mountain Soil and Proposal of Albitalea gen. nov. to Replace the Illegitimate Prokaryotic Genus Name Geomonas Khan et al. 2020
Shehzad Abid Khan, Hyung Min Kim, Byung Hee Chun, Che Ok Jeon
Current Microbiology.2021; 78(7): 2548. CrossRef - An atlas of bacterial secondary metabolite biosynthesis gene clusters
Bin Wei, Ao‐Qi Du, Zhen‐Yi Zhou, Cong Lai, Wen‐Chao Yu, Jin‐Biao Yu, Yan‐Lei Yu, Jian‐Wei Chen, Hua‐Wei Zhang, Xue‐Wei Xu, Hong Wang
Environmental Microbiology.2021; 23(11): 6981. CrossRef - Nesterenkonia sedimenti sp. nov., isolated from marine sediment
Fuquan Xie, Shengxiang Pei, Yubian Zhang, Yun Tian, Gaiyun Zhang
Archives of Microbiology.2021; 203(10): 6287. CrossRef - Phylogenomics reveals the evolution of root nodulating alpha- and beta-Proteobacteria (rhizobia)
Saleh Rahimlou, Mohammad Bahram, Leho Tedersoo
Microbiological Research.2021; 250: 126788. CrossRef - Mesonia hitae sp. nov., isolated from the seawater of the South Atlantic Ocean
Ying Zhou, Xiujun Gao, Jingjing Xu, Guizhen Li, Rui Ma, Peisheng Yan, Chunming Dong, Zongze Shao
International Journal of Systematic and Evolutionary Microbiology.2021;[Epub] CrossRef - Microcella flavibacter sp. nov., isolated from marine sediment, and reclassification of Chryseoglobus frigidaquae, Chryseoglobus indicus, and Yonghaparkia alkaliphila as Microcella frigidaquae comb. nov., Microcella indica nom. nov., and Microcella alkali
Fuquan Xie, Shengxiang Pei, Xiaoyun Huang, Lina Wang, Jinyan Kou, Gaiyun Zhang
Antonie van Leeuwenhoek.2021; 114(12): 2133. CrossRef - Hongsoonwoonella zoysiae gen. nov., sp. nov., a new member of the family Stappiaceae isolated from a tidal mudflat
Soon Dong Lee, Sung-Min Kim, Hong Lim Yang, Yeong-Sik Byeon, In Seop Kim
Archives of Microbiology.2021; 203(4): 1335. CrossRef -
Poseidonibacter parvus sp. nov., isolated from a squid
Min Ji Kim, Min-gyung Baek, Su-Kyoung Shin, Hana Yi
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Methylomonas albis sp. nov. and Methylomonas fluvii sp. nov.: Two cold-adapted methanotrophs from the river Elbe and emended description of the species Methylovulum psychrotolerans
Ingeborg Bussmann, Fabian Horn, Michael Hoppert, Karl-Walter Klings, Anke Saborowski, Julia Warnstedt, Susanne Liebner
Systematic and Applied Microbiology.2021; 44(6): 126248. CrossRef -
Chitinibacter bivalviorum sp. nov., isolated from the gut of the freshwater mussel Anodonta arcaeformis
Jee-Won Choi, Jae-Yun Lee, Dong-Wook Hyun, June-Young Lee, Pil Soo Kim, Jeong Eun Han, Yun-Seok Jeong, So-Yeon Lee, Hojun Sung, Euon Jung Tak, Hyun Sik Kim, Jin-Woo Bae
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Aerobic Denitrification and Heterotrophic Sulfur Oxidation in the Genus Halomonas Revealed by Six Novel Species Characterizations and Genome-Based Analysis
Liping Wang, Zongze Shao
Frontiers in Microbiology.2021;[Epub] CrossRef - Horizontal Gene Transfer and Genomic Erosion Shape Functional Differences of the Two-Partner Secretion Toxin Exla in the Genus Pseudomonas
Viviana Job, Laura Gomez-Valero, Adèle Renier, Christophe Rusniok, Stéphanie Bouillot, Viviane Chenal-Francisque, Erwan Gueguen, Annie Adrait, Mylène Robert-Genthon, Katy Jeannot, Peter Panchev, Sylvie Elsen, Marie-Odile Fauvarque, Yohann Couté, Carmen Bu
SSRN Electronic Journal .2021;[Epub] CrossRef - Schlegelella koreensis sp. nov., isolated from evaporator core of automobile air conditioning system
Dhiraj Kumar Chaudhary, Hyosun Lee, Ram Hari Dahal, Dong-Uk Kim
Archives of Microbiology.2021; 203(5): 2373. CrossRef -
Chryseobacterium potabilaquae sp. nov., Chryseobacterium aquaeductus sp. nov. and Chryseobacterium fistulae sp. nov., from drinking water systems
Teresa Lucena, María A. Ruvira, M. Carmen Macián, David R. Arahal, Rosa Aznar, María J. Pujalte
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Flavobacterium undicola sp. nov., isolated from a freshwater lake
Wen-Ming Chen, Yi-Ru Xie, Soon-Wo Kwon, Shih-Yi Sheu
Archives of Microbiology.2021; 203(3): 989. CrossRef - Flavobacterium difficile sp. nov., isolated from a freshwater waterfall
Wen-Ming Chen, Ya-Xiu You, Chiu-Chung Young, Shih-Yao Lin, Shih-Yi Sheu
Archives of Microbiology.2021; 203(7): 4449. CrossRef -
Salipiger mangrovisoli sp. nov., isolated from mangrove soil and the proposal for the reclassification of Paraphaeobacter pallidus as Salipiger pallidus comb. nov.
Juan Du, Yang Liu, Tao Pei, Ming-Rong Deng, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Classification of uncultivated anammox bacteria and Candidatus Uabimicrobium into new classes and provisional nomenclature as Candidatus Brocadiia classis nov. and Candidatus Uabimicrobiia classis nov. of the phylum Planctomycetes and novel family Candida
Tushar Lodha, Simran Narvekar, Prachi Karodi
Systematic and Applied Microbiology.2021; 44(6): 126272. CrossRef -
Sulfurimonas indica sp. nov., a hydrogen- and sulfur-oxidizing chemolithoautotroph isolated from a hydrothermal sulfide chimney in the Northwest Indian Ocean
Qitao Hu, Shasha Wang, Qiliang Lai, Zongze Shao, Lijing Jiang
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Pontibacter cellulosilyticus sp. nov., a carboxymethyl cellulose-hydrolysing bacterium isolated from coastal water
Minchung Kang, Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Chitinophaga rhizophila sp. nov., isolated from rhizosphere soil of banana
Xian-Jiao Zhang, Guang-Da Feng, Fan Yang, Honghui Zhu, Qing Yao
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Jinshanibacter allomyrinae sp. nov., isolated from larvae of Allomyrina dichotoma, proposal of Insectihabitans xujianqingii gen. nov., comb. nov. and emended descriptions of the genera Jinshanibacter, Limnobaculum and Pragia
Soon Dong Lee, Yeong-Sik Byeon, Sung-Min Kim, Hong Lim Yang, In Seop Kim
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Revealing taxon-specific heavy metal-resistance mechanisms in denitrifying phosphorus removal sludge using genome-centric metaproteomics
Yuan Lin, Liye Wang, Ke Xu, Kan Li, Hongqiang Ren
Microbiome.2021;[Epub] CrossRef - Development of qPCR Detection Assay for Potato Pathogen Pectobacterium atrosepticum Based on a Unique Target Sequence
Anna A. Lukianova, Peter V. Evseev, Alexander A. Stakheev, Irina B. Kotova, Sergey K. Zavriev, Alexander N. Ignatov, Konstantin A. Miroshnikov
Plants.2021; 10(2): 355. CrossRef - Marivivens aquimaris sp. nov., isolated from seawater
Jeong Ah Kim, Binna Lee, Ji Young Kang, Jae Jun Song, Jong Hyun Choi
Archives of Microbiology.2021; 203(6): 3229. CrossRef - Lysobacter arenosi sp. nov. and Lysobacter solisilvae sp. nov. isolated from soil
Kyeong Ryeol Kim, Kyung Hyun Kim, Shehzad Abid Khan, Hyung Min Kim, Dong Min Han, Che Ok Jeon
Journal of Microbiology.2021; 59(8): 709. CrossRef - Sediminibacterium soli sp. nov., isolated from soil
Shijuan Wu, Limin Zhong, Shuijiao Liao, Tengfei Li, Zijie Zhou, Gejiao Wang
Archives of Microbiology.2021; 203(3): 967. CrossRef - Rhodobacter amnigenus sp. nov. and Rhodobacter ruber sp. nov., isolated from freshwater habitats
Wen-Ming Chen, Ting-Hsuan Chang, Che-Chia Yang, Der-Shyan Sheu, Li-Cheng Jheng, Shih-Yi Sheu
International Journal of Systematic and Evolutionary Microbiology.2021;[Epub] CrossRef -
Alcanivorax profundimaris sp. nov., a Novel Marine Hydrocarbonoclastic Bacterium Isolated from Seawater and Deep-Sea Sediment
Chunming Dong, Qiliang Lai, Xiupian Liu, Li Gu, Yu Zhang, Zhangxian Xie, Dazhi Wang, Zongze Shao
Current Microbiology.2021; 78(3): 1053. CrossRef - Ornithobacterium rhinotracheale: MALDI-TOF MS and Whole Genome Sequencing Confirm That Serotypes K, L and M Deviate from Well-Known Reference Strains and Numerous Field Isolates
Merima Alispahic, Lukas Endler, Michael Hess, Claudia Hess
Microorganisms.2021; 9(5): 1006. CrossRef -
Geomonas silvestris sp. nov., Geomonas paludis sp. nov. and Geomonas limicola sp. nov., isolated from terrestrial environments, and emended description of the genus Geomonas
Hideomi Itoh, Zhenxing Xu, Yoko Masuda, Natsumi Ushijima, Chie Hayakawa, Yutaka Shiratori, Keishi Senoo
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Marinobacter mangrovi sp. nov., isolated from mangrove sediment
En Yi, Zongze Shao, Guizhen Li, Xiaobo Liang, Meixian Zhou
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Paraneptunicella aestuarii gen. nov., sp. nov., a member of the family Alteromonadaceae isolated from seawater in East China Sea
Yanzhu Zhang, Shufen He, Liufei Shi, Yang Liu, Deqiang Mao, Biying Liu, Xiaoping He, Bahareh Nowruzi, Dawoon Jung, Weiyan Zhang, Lijian Ding, Shan He, Liwei Liu
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Sulfurimonas sediminis sp. nov., a novel hydrogen- and sulfur-oxidizing chemolithoautotroph isolated from a hydrothermal vent at the Longqi system, southwestern Indian ocean
Shasha Wang, Zongze Shao, Qiliang Lai, Xuewen Liu, Shaobin Xie, Lijing Jiang, Suping Yang
Antonie van Leeuwenhoek.2021; 114(6): 813. CrossRef -
Dyadobacter sandarakinus sp. nov., isolated from Arctic tundra soil, and emended descriptions of Dyadobacter alkalitolerans, Dyadobacter koreensis and Dyadobacter psychrophilus
Yongping Zhang, Xiaoya Peng, Kun Qin, Jia Liu, Qiang Xu, Jingjing Niu, Yanyan Zheng, Fang Peng
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Current Status and Future Strategies to Increase Secondary Metabolite Production from Cyanobacteria
Yujin Jeong, Sang-Hyeok Cho, Hookeun Lee, Hyung-Kyoon Choi, Dong-Myung Kim, Choul-Gyun Lee, Suhyung Cho, Byung-Kwan Cho
Microorganisms.2020; 8(12): 1849. CrossRef - Description of Three Novel Members in the Family Geobacteraceae, Oryzomonas japonicum gen. nov., sp. nov., Oryzomonas sagensis sp. nov., and Oryzomonas ruber sp. nov.
Zhenxing Xu, Yoko Masuda, Chie Hayakawa, Natsumi Ushijima, Keisuke Kawano, Yutaka Shiratori, Keishi Senoo, Hideomi Itoh
Microorganisms.2020; 8(5): 634. CrossRef -
Hypericibacter terrae gen. nov., sp. nov. and Hypericibacter adhaerens sp. nov., two new members of the family Rhodospirillaceae isolated from the rhizosphere of Hypericum perforatum
Zahra Noviana, Selma Vieira, Javier Pascual, Serge Alain Tanemossu Fobofou, Manfred Rohde, Cathrin Spröer, Boyke Bunk, Jorg Overmann
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(3): 1850. CrossRef -
Mucilaginibacter celer sp. nov. and Aquirhabdus parva gen. nov., sp. nov., isolated from freshwater
MinJi Kim, Su-Kyoung Shin, Hana Yi
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(10): 5479. CrossRef -
Methylotenera oryzisoli sp. nov., a lanthanide-dependent methylotrophic bacteria isolated from rice field soil
Haoxin Lv, Nurettin Sahin, Akio Tani
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(4): 2713. CrossRef -
Lewinella aurantiaca sp. nov., a carotenoid pigment-producing bacterium isolated from surface seawater
Inhyup Kim, Geeta Chhetri, Jiyoun Kim, Minchung Kang, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(12): 6180. CrossRef - Pseudomonas kitaguniensis sp. nov., a pathogen causing bacterial rot of Welsh onion in Japan
Hiroyuki Sawada, Takashi Fujikawa, Yoshie Nishiwaki, Harukuni Horita
International Journal of Systematic and Evolutionary Microbiology.2020; 70(5): 3018. CrossRef -
Sandaracinomonas limnophila gen. nov., sp. nov., a new member of the family Cytophagaceae isolated from a freshwater mesocosm
Wen-Ming Chen, Cheng-Ye Cai, Shih-Yi Sheu
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(4): 2178. CrossRef -
Use of Newly Designed Primers for Quantification of Complete Ammonia-Oxidizing (Comammox) Bacterial Clades and Strict Nitrite Oxidizers in the Genus
Nitrospira
Ran Jiang, Jian-Gong Wang, Ting Zhu, Bin Zou, Dan-Qi Wang, Sung-Keun Rhee, Dong An, Zhi-Yuan Ji, Zhe-Xue Quan, Alfons J. M. Stams
Applied and Environmental Microbiology.2020;[Epub] CrossRef - Importance of Defluviitalea raffinosedens for Hydrolytic Biomass Degradation in Co-Culture with Hungateiclostridium thermocellum
Regina Rettenmaier, Martina Schneider, Bernhard Munk, Michael Lebuhn, Sebastian Jünemann, Alexander Sczyrba, Irena Maus, Vladimir Zverlov, Wolfgang Liebl
Microorganisms.2020; 8(6): 915. CrossRef -
Flavobacterium restrictum sp. nov., Flavobacterium rhamnosiphilum sp. nov., and Flavobacterium zepuense sp. nov. isolated from glaciers
Guo-Qing Zhang, Lei-Lei Yang, Qing Liu, Hong-Can Liu, Yu-Guang Zhou, Yu-Hua Xin
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(8): 4583. CrossRef -
Arenimonas terrae sp. nov., isolated from orchard soil
Dong Min Han, Byung Hee Chun, Hyung Min Kim, Shehzad Abid Khan, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(1): 537. CrossRef - Morphologically Different Pectobacterium brasiliense Bacteriophages PP99 and PP101: Deacetylation of O-Polysaccharide by the Tail Spike Protein of Phage PP99 Accompanies the Infection
Anna A. Lukianova, Mikhail M. Shneider, Peter V. Evseev, Anna M. Shpirt, Eugenia N. Bugaeva, Anastasia P. Kabanova, Ekaterina A. Obraztsova, Kirill K. Miroshnikov, Sofiya N. Senchenkova, Alexander S. Shashkov, Stepan V. Toschakov, Yuriy A. Knirel, Alexand
Frontiers in Microbiology.2020;[Epub] CrossRef - Shedding light on biogas: Phototrophic biofilms in anaerobic digesters hold potential for improved biogas production
Christian Abendroth, Adriel Latorre-Pérez, Manuel Porcar, Claudia Simeonov, Olaf Luschnig, Cristina Vilanova, Javier Pascual
Systematic and Applied Microbiology.2020; 43(1): 126024. CrossRef - Saliniradius amylolyticus gen. nov., sp. nov., isolated from solar saltern sediment
Heeyoung Kang, Inseong Cha, Haneul Kim, Kiseong Joh
International Journal of Systematic and Evolutionary Microbiology.2020; 70(1): 267. CrossRef -
Pseudomonas lalkuanensis sp. nov., isolated from a bacterial consortia of contaminated soil enriched for the remediation of e-waste
Vipool Thorat, Kiran Kirdat, Bhavesh Tiwarekar, Elaine DaCosta, Prasenjit Debbarma, Yogesh Shouche, Shivaji Sathe, Reeta Goel, Tushar Lodha, Amit Yadav
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(12): 6468. CrossRef -
Denitrobaculum tricleocarpae gen. nov., sp. nov., a marine bacterium from coralline algae Tricleocarpa sp
Guanghua Wang, Dahao Tang, Guangyu Li, Shuailiang Xu, Ge Dang, Hongfei Su, Zhiheng Liao, Biao Chen, Wen Huang, Jiayuan Liang, Kefu Yu
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(5): 3335. CrossRef -
Roseovarius gahaiensis sp. nov., isolated from Gahai Saline Lake, PR China
Xia Sun, Fang Wang, Yang Liu, Ying Lu
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(10): 5330. CrossRef - Bacillus yapensis sp. nov., a novel piezotolerant bacterium isolated from deep-sea sediment of the Yap Trench, Pacific Ocean
Xiashutong Xu, Libo Yu, Guangxin Xu, Qilin Wang, Shiping Wei, Xixiang Tang
Antonie van Leeuwenhoek.2020; 113(3): 389. CrossRef - Description of Luteithermobacter gelatinilyticus gen. nov., sp. nov., and Paremcibacter congregatus gen. nov., comb. nov. via reclassification of the genus Emcibacter
Mi-Jeong Park, Teddy Namirimu, Sung-Hyun Yang, Kae Kyoung Kwon
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(8): 4691. CrossRef - Genetic Organization of the aprX-lipA2 Operon Affects the Proteolytic Potential of Pseudomonas Species in Milk
Christopher Maier, Christopher Huptas, Mario von Neubeck, Siegfried Scherer, Mareike Wenning, Genia Lücking
Frontiers in Microbiology.2020;[Epub] CrossRef -
Nonomuraea nitratireducens sp. nov., a new actinobacterium isolated from Suaeda australis Moq. rhizosphere
Yixin Ou, Yong Sheng, Xiaojing Hu, Dongjin Leng, Jiafu Huang, Zhiyu Hu, Linquan Bai, Zixin Deng, Qianjin Kang, Yingying Wu
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(9): 5026. CrossRef - Muricauda oceani sp. nov., isolated from the East Pacific Ocean
Bingxia Dong, Sidong Zhu, Ting Chen, Na Ren, Xiunuan Chen, Yong Chen, Zehao Xue, Xudong Shen, Yizhe Huang, Jifang Yang, Jigang Chen
International Journal of Systematic and Evolutionary Microbiology.2020; 70(6): 3839. CrossRef - Sphingobium fluviale sp. nov., isolated from a river
Shih-Yi Sheu, Ya-Ping Guo, Soon-Wo Kwon, Wen-Ming Chen
International Journal of Systematic and Evolutionary Microbiology.2020; 70(2): 827. CrossRef - Characterization of Staphylococcus intermedius Group Isolates Associated with Animals from Antarctica and Emended Description of Staphylococcus delphini
Veronika Vrbovská, Ivo Sedláček, Michal Zeman, Pavel Švec, Vojtěch Kovařovic, Ondrej Šedo, Monika Laichmanová, Jiří Doškař, Roman Pantůček
Microorganisms.2020; 8(2): 204. CrossRef - Variovorax beijingensis sp. nov., a novel plant-associated bacterial species with plant growth-promoting potential isolated from different geographic regions of Beijing, China
Jun-lian Gao, Yu-chen Sun, Jing Xue, Pengbo Sun, Hui Yan, Mohammad Sayyar Khan, Li-wei Wang, Xiuhai Zhang, Jian-guang Sun
Systematic and Applied Microbiology.2020; 43(6): 126135. CrossRef -
Aliikangiella coralliicola sp. nov., a bacterium isolated from coral Porites lutea, and proposal of Pleioneaceae fam. nov. to accommodate Pleionea and Aliikangiella
Guanghua Wang, Ge Dang, Shuailiang Xu, Jianfeng Liu, Hongfei Su, Jiayuan Liang, Wen Huang, Yinghui Wang, Kefu Yu
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(11): 5880. CrossRef -
Jeotgalibaca ciconiae sp. nov., isolated from the faeces of an Oriental stork
So-Yeon Lee, Woorim Kang, Pil Soo Kim, Hyun Sik Kim, Hojun Sung, Na-Ri Shin, Ji-Hyun Yun, Jae-Yun Lee, June-Young Lee, Mi-Ja Jung, Yun-Seok Jeong, Euon Jung Tak, Jeong Eun Han, Dong-Wook Hyun, Myung-Suk Kang, Ki-Eun Lee, Byoung-Hee Lee, Jin-Woo Bae
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(5): 3247. CrossRef - Aquabacterium lacunae sp. nov., isolated from a freshwater pond
Wen-Ming Chen, Tzu-Ying Chen, Soon-Wo Kwon, Shih-Yi Sheu
International Journal of Systematic and Evolutionary Microbiology.2020; 70(4): 2888. CrossRef -
Zoogloea dura sp. nov., a N2-fixing bacterium isolated from forest soil and emendation of the genus Zoogloea and the species Zoogloea oryzae and Zoogloea ramigera
Ram Hari Dahal, Dhiraj Kumar Chaudhary, Dong-Uk Kim, Jaisoo Kim
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(10): 5312. CrossRef -
Roseimaritima sediminicola sp. nov., a new member of Planctomycetaceae isolated from Chilika lagoon
Dhanesh Kumar, Kumar Gaurav, Jagadeeshwari U, Deepshikha G, Sasikala Ch., Ramana Ch.V.
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(4): 2616. CrossRef - Lactobacillus jinshani sp. nov., isolated from solid-state vinegar culture of Zhenjiang aromatic vinegar
Yongjian Yu, Xin Li, Junhong Zhang, Li-Juan Chai, Zhen-Ming Lu, Zheng-Hong Xu
Antonie van Leeuwenhoek.2020; 113(1): 43. CrossRef - Aquirufa rosea sp. nov., isolated from a freshwater lake
Shih-Yi Sheu, Tzu-Ying Chen, Wen-Ming Chen
International Journal of Systematic and Evolutionary Microbiology.2020; 70(5): 3145. CrossRef -
Staphylococcus borealis sp. nov., isolated from human skin and blood
Maria Pain, Runa Wolden, Daniel Jaén-Luchoro, Francisco Salvà-Serra, Beatriz Piñeiro Iglesias, Roger Karlsson, Claus Klingenberg, Jorunn Pauline Cavanagh
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(12): 6067. CrossRef - Exploring the Diversity Within the Genus Francisella – An Integrated Pan-Genome and Genome-Mining Approach
Rajender Kumar, Jeanette E. Bröms, Anders Sjöstedt
Frontiers in Microbiology.2020;[Epub] CrossRef -
Mesonia oceanica sp. nov., isolated from oceans during the Tara oceans expedition, with a preference for mesopelagic waters
Teresa Lucena, Isabel Sanz-Sáez, David R. Arahal, Silvia G. Acinas, Olga Sánchez, Carlos Pedrós-Alió, Rosa Aznar, María J. Pujalte
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(7): 4329. CrossRef - Jiella pacifica sp. nov., isolated from the West Pacific Ocean
Zehao Xue, Sidong Zhu, Xiunuan Chen, Ting Chen, Na Ren, Yong Chen, Bingxia Dong, Xudong Shen, Yizhe Huang, Jifang Yang, Jigang Chen
International Journal of Systematic and Evolutionary Microbiology.2020; 70(7): 4345. CrossRef - Sphingomonas lacunae sp. nov., isolated from a freshwater pond
Shih-Yi Sheu, Che-Chia Yang, Der-Shyan Sheu, Jyh-Ming Tsai, Wen-Ming Chen
International Journal of Systematic and Evolutionary Microbiology.2020; 70(11): 5899. CrossRef - Bradymonabacteria, a novel bacterial predator group with versatile survival strategies in saline environments
Da-Shuai Mu, Shuo Wang, Qi-Yun Liang, Zhao-Zhong Du, Renmao Tian, Yang Ouyang, Xin-Peng Wang, Aifen Zhou, Ya Gong, Guan-Jun Chen, Joy Van Nostrand, Yunfeng Yang, Jizhong Zhou, Zong-Jun Du
Microbiome.2020;[Epub] CrossRef -
Gemmobacter aquarius sp. nov., Runella rosea sp. nov. and Flavobacterium fluviale sp. nov., isolated from the Namhangang River system
Min-gyung Baek, Su-Kyoung Shin, Hana Yi
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(11): 5640. CrossRef - Sphingobacterium endophyticum sp. nov., a novel endophyte isolated from halophyte
Yang-Yang Liu, Fang Liu, Yu-Qian Li, Rui-Feng Lei, Qin Ma, Manik Prabhu Narsing Rao, Dilireba Abudourousuli, Zulihumaer Rouzi, Muyesaier Aosiman, Deng-Di An, Wen-Jun Li
Archives of Microbiology.2020; 202(10): 2771. CrossRef -
Sphingomonas montanisoli sp. nov., isolated from mountain soil
Zixiao Xu, Yuxiao Zhang, Yasir Muhammad, Gejiao Wang
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(6): 3606. CrossRef - Out of the Abyss: Genome and Metagenome Mining Reveals Unexpected Environmental Distribution of Abyssomicins
Alba Iglesias, Adriel Latorre-Pérez, James E. M. Stach, Manuel Porcar, Javier Pascual
Frontiers in Microbiology.2020;[Epub] CrossRef -
Pseudomonas xionganensis sp. nov., isolated from Baiyangdian Lake in Xiong'an New Area
Yingying Zhao, Yunzhen Yang, Fei He, Chao Wang, Jie Feng, Xiumin Zhang
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(12): 6052. CrossRef - Massilia aquatica sp. nov., Isolated from a Subtropical Stream in China
Hui-Bin Lu, Tong-Chu Deng, Mei-Ying Xu
Current Microbiology.2020; 77(10): 3185. CrossRef - Duganella rivus sp. nov., Duganella fentianensis sp. nov., Duganella qianjiadongensis sp. nov. and Massilia guangdongensis sp. nov., isolated from subtropical streams in China and reclassification of all species within genus Pseudoduganella
Hui-Bin Lu, Zhi-Peng Cai, Yong-Gang Yang, Mei-Ying Xu
Antonie van Leeuwenhoek.2020; 113(8): 1155. CrossRef -
Poritiphilus flavus gen. nov., sp. nov., a member of the family Flavobacteriaceae isolated from coral Porites lutea
Guanghua Wang, Shuailiang Xu, Ge Dang, Jianfeng Liu, Hongfei Su, Biao Chen, Zhiheng Liao, Wen Huang, Jiayuan Liang, Yinghui Wang, Kefu Yu
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(11): 5620. CrossRef -
Sphingomonas edaphi sp. nov., a novel species isolated from beach soil in the Republic of Korea
Hyungdong Kim, Geeta Chhetri, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(1): 522. CrossRef -
Thalassocella blandensis gen. nov., sp. nov., a novel member of the family Cellvibrionaceae
Teresa Lucena, David R. Arahal, Isabel Sanz-Sáez, Silvia G. Acinas, Olga Sánchez, Rosa Aznar, Carlos Pedrós-Alió, María J. Pujalte
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(2): 1231. CrossRef - Hymenobacter terrestris sp. nov. and Hymenobacter lapidiphilus sp. nov., isolated from regoliths in Antarctica
Ivo Sedláček, Roman Pantůček, Michal Zeman, Pavla Holochová, Ondrej Šedo, Eva Staňková, Pavel Švec, Stanislava Králová, Petra Vídeňská, Lenka Micenková, Urvashi, Suresh Korpole, Rup Lal
International Journal of Systematic and Evolutionary Microbiology.2020; 70(12): 6364. CrossRef - Reclassification of genus Izhakiella into the family Erwiniaceae based on phylogenetic and genomic analyses
Lingmin Jiang, Dexin Wang, Ji-Sun Kim, Ju Huck Lee, Dae-Hyuk Kim, Suk Weon Kim, Jiyoung Lee
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(5): 3541. CrossRef -
Orrella amnicola sp. nov., isolated from a freshwater river, reclassification of Algicoccus marinus as Orrella marina comb. nov., and emended description of the genus Orrella
Shih-Yi Sheu, Li-Chu Chen, Che-Chia Yang, Aurelien Carlier, Wen-Ming Chen
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(12): 6381. CrossRef - Allorhizobium terrae sp. nov., isolated from paddy soil, and reclassification of Rhizobium oryziradicis (Zhao et al. 2017) as Allorhizobium oryziradicis comb. nov.
Shih-Yao Lin, Asif Hameed, Hsin-I Huang, Chiu-Chung Young
International Journal of Systematic and Evolutionary Microbiology.2020; 70(1): 397. CrossRef -
Antrihabitans stalactiti gen. nov., sp. nov., a new member of the family Nocardiaceae isolated from a cave
Soon Dong Lee, In Seop Kim, Susanne Verbarg, Yochan Joung
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(10): 5503. CrossRef -
Methylobacterium terricola sp. nov., a gamma radiation-resistant bacterium isolated from gamma ray-irradiated soil
Jiyoun Kim, Geeta Chhetri, Inhyup Kim, Byungjo Lee, Wonhee Jang, Myung Kyum Kim, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(4): 2449. CrossRef -
Pseudomonas leptonychotis sp. nov., isolated from Weddell seals in Antarctica
Dana Nováková, Pavel Švec, Michal Zeman, Hans-Jürgen Busse, Ivana Mašlaňová, Roman Pantůček, Stanislava Králová, Lucie Krištofová, Ivo Sedláček
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(1): 302. CrossRef - Tichowtungia aerotolerans gen. nov., sp. nov., a novel representative of the phylum Kiritimatiellaeota and proposal of Tichowtungiaceae fam. nov., Tichowtungiales ord. nov. and Tichowtungiia class. nov.
Da-Shuai Mu, Liu-Yan Zhou, Qi-Yun Liang, Guan-Jun Chen, Zong-Jun Du
International Journal of Systematic and Evolutionary Microbiology.2020; 70(9): 5001. CrossRef -
Alcanivorax sediminis sp. nov., isolated from deep-sea sediment of the Pacific Ocean
Xianzhi Liao, Qiliang Lai, Junpeng Yang, Chunming Dong, Dengfeng Li, Zongze Shao
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(7): 4280. CrossRef -
Oleiharenicola lentus sp. nov., isolated from irrigation water
Wen-Ming Chen, Tzu-Ying Chen, Che-Chia Yang, Shih-Yi Sheu
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(5): 3440. CrossRef -
Aestuariirhabdus litorea gen. nov., sp. nov., isolated from a sea tidal flat and proposal of Aestuariirhabdaceae fam. nov.
Shehzad Abid Khan, Hye Su Jung, Hyung Min Kim, Jeill Oh, Sang-Suk Lee, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(4): 2239. CrossRef - Larkinella punicea sp. nov., isolated from manganese mine soil
Zijie Zhou, Lin Zhu, Yixuan Dong, Xian Xia, Shijuan Wu, Gejiao Wang
Archives of Microbiology.2020; 202(9): 2517. CrossRef - Persicimonas caeni gen. nov., sp. nov., the Representative of a Novel Wide-Ranging Predatory Taxon in Bradymonadales
Shuo Wang, Dashuai Mu, Zong-Jun Du
Frontiers in Microbiology.2020;[Epub] CrossRef - Distribution and conservation of known secondary metabolite biosynthesis gene clusters in the genomes of geographically diverse Microcystis aeruginosa strains
Leanne A. Pearson, Nicholas D. Crosbie, Brett A. Neilan
Marine and Freshwater Research.2020; 71(5): 701. CrossRef -
Terricaulis silvestris gen. nov., sp. nov., a novel prosthecate, budding member of the family Caulobacteraceae isolated from forest soil
Selma Vieira, Javier Pascual, Christian Boedeker, Alicia Geppert, Thomas Riedel, Manfred Rohde, Jörg Overmann
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(9): 4966. CrossRef - Description of Azotobacter chroococcum subsp. isscasi subsp. nov. isolated from paddy soil and establishment of Azotobacter chroococcum subsp. chroococcum subsp. nov.
Haiyang Jin, Hui Wang, Yanhui Zhang, Tianlong Hu, Zhibin Lin, Benjuan Liu, Jing Ma, Xiaojie Wang, Qi Liu, Xingwu Lin, Zubin Xie
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(3): 2124. CrossRef -
Gracilibacillus oryzae sp. nov., isolated from rice seeds
Shan-Wen He, Xing Wang, He-Bao Guo, Ji-Gang Han, Kyu Kyu Thin, Ju-sheng Gao, Li-An Ma, Xiao-Xia Zhang
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(10): 5467. CrossRef -
Senegalimassilia faecalis sp. nov., an anaerobic actinobacterium isolated from human faeces, and emended description of the genus Senegalimassilia
Kook-Il Han, Ji-Sun Kim, Keun Chul Lee, Mi Kyung Eom, Min Kuk Suh, Han Sol Kim, Seung-Hwan Park, Ju Huck Lee, Se Won Kang, Jam-Eon Park, Byeong Seob Oh, Seung Yeob Yu, Seung-Hyeon Choi, Dong Ho Lee, Hyuk Yoon, Byung-Yong Kim, Je Hee Lee, Jung-Sook Lee
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(3): 1684. CrossRef - Limnobacter alexandrii sp. nov., a thiosulfate-oxidizing, heterotrophic and EPS-bearing Burkholderiaceae isolated from cultivable phycosphere microbiota of toxic Alexandrium catenella LZT09
Yuhan Duan, Zhiwei Jiang, Zheng Wu, Zhi Sheng, Xi Yang, Jingya Sun, Xiaoling Zhang, Qiao Yang, Xinwei Yu, Jianbo Yan
Antonie van Leeuwenhoek.2020; 113(11): 1689. CrossRef -
Alteromonas profundi sp. nov., isolated from the Indian Ocean
Xudong Shen, Sidong Zhu, Bingxia Dong, Yong Chen, Zehao Xue, Na Ren, Ting Chen, Xiunuan Chen, Jifang Yang, Jigang Chen
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(8): 4531. CrossRef -
Wenzhouxiangella limi sp. nov., isolated from a salt lake
Xiao-Yu Zhang, Rui Zhang, Jia-Cheng Wang, Ting Zhang, Zong-Jun Du
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(8): 4610. CrossRef -
Hymenobacter ginkgonis sp. nov., isolated from bark of Ginkgo biloba
Inseong Cha, Heeyoung Kang, Haneul Kim, Seokhyeon Bae, Kiseong Joh
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(8): 4760. CrossRef -
Maribacter luteus sp. nov., a marine bacterium isolated from intertidal sand of the Yellow Sea
Ang Liu, Yan-Jiao Zhang, De-Kun Liu, Xiu-Zhen Li
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(5): 3497. CrossRef -
Cryobacterium soli sp. nov., isolated from forest soil
Chunjie Gong, Qiliang Lai, Hanfeng Cai, Yanming Jiang, Hu Liao, Yunfei Liu, Dongsheng Xue
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(1): 675. CrossRef -
Flavobacterium supellecticarium sp. nov., isolated from an abandoned construction timber
Shih-Yao Lin, Wen-Ming Chen, Guan-Hua Huang, Asif Hameed, Chun-Tse Chang, Chia-Fang Tsai, Chiu-Chung Young
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(6): 3731. CrossRef - Rubrivivax albus sp. nov., isolated from a freshwater pond
Shih-Yi Sheu, Zhi-Hao Li, Chiu-Chung Young, Wen-Ming Chen
International Journal of Systematic and Evolutionary Microbiology.2020; 70(2): 805. CrossRef -
Tabrizicola oligotrophica sp. nov. and Rhodobacter tardus sp. nov., two new species of bacteria belonging to the family Rhodobacteraceae
Ceshing Sheu, Zhi-Hao Li, Shih-Yi Sheu, Che-Chia Yang, Wen-Ming Chen
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(12): 6266. CrossRef -
Spirosoma telluris sp. nov. and Spirosoma arboris sp. nov. isolated from soil and tree bark, respectively
Heeyoung Kang, Inseong Cha, Haneul Kim, Kiseong Joh
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(10): 5355. CrossRef -
Devosia indica sp. nov., isolated from surface seawater in the Indian Ocean
Danqiu Lin, Yizhe Huang, Yong Chen, Sidong Zhu, Jifang Yang, Jigang Chen
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(1): 340. CrossRef - Brevilactibacter flavus gen. nov., sp. nov., a novel bacterium of the family Propionibacteriaceae isolated from raw milk and dairy products and reclassification of Propioniciclava sinopodophylli as Brevilactibacter sinopodophylli comb. nov.
Mareike Wenning, Franziska Breitenwieser, Christopher Huptas, Etienne Doll, Benedikt Bächler, Annika Schulz, Andreas Dunkel, Thomas Hofmann, Mario von Neubeck, Hans-Jürgen Busse, Siegfried Scherer
International Journal of Systematic and Evolutionary Microbiology.2020; 70(4): 2186. CrossRef - Ideonella livida sp. nov., isolated from a freshwater lake
Wen-Ming Chen, Li-Chu Chen, Der-Shyan Sheu, Jyh-Ming Tsai, Shih-Yi Sheu
International Journal of Systematic and Evolutionary Microbiology.2020; 70(9): 4942. CrossRef - Jejubacter calystegiae gen. nov., sp. nov., moderately halophilic, a new member of the family Enterobacteriaceae, isolated from beach morning glory
Lingmin Jiang, Dexin Wang, Jung-Sook Lee, Dae-Hyuk Kim, Jae Cheol Jeong, Cha Young Kim, Suk Weon Kim, Jiyoung Lee
Journal of Microbiology.2020; 58(5): 357. CrossRef -
Hymenobacter setariae sp. nov., isolated from the ubiquitous weedy grass Setaria viridis
Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Hyungdong Kim, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(6): 3724. CrossRef - Geomonas soli gen. nov., sp. nov., a New Member of the Family Comamonadaceae, Isolated from Soil
Shehzad Abid Khan, Sang Eun Jeong, Hye Yoon Park, Sang-Suk Lee, Che Ok Jeon
Current Microbiology.2020; 77(2): 286. CrossRef - Arenibacter lacus sp. nov., Isolated from Chilika Lagoon, India
Dhanesh Kumar, Nandardhane Smita, Gaurav Kumar, Gandham Suresh, Uppada Jagadeeshwari, Chintalapati Sasikala, Chintalapati Venkata Ramana
Current Microbiology.2020; 77(12): 4152. CrossRef -
Adhaeribacter arboris sp. nov., and Adhaeribacter pallidiroseus sp. nov., novel bacteria isolated from birch tree (Betula platyphylla)
Heeyoung Kang, Haneul Kim, Inseong Cha, Kiseong Joh
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(12): 6195. CrossRef - Sphingobium algorifonticola sp. nov., isolated from a cold spring
Wen-Ming Chen, Ya-Ping Guo, Ceshing Sheu, Shih-Yi Sheu
International Journal of Systematic and Evolutionary Microbiology.2020; 70(1): 309. CrossRef - Distribution of Phototrophic Purple Nonsulfur Bacteria in Massive Blooms in Coastal and Wastewater Ditch Environments
Akira Hiraishi, Nobuyoshi Nagao, Chinatsu Yonekawa, So Umekage, Yo Kikuchi, Toshihiko Eki, Yuu Hirose
Microorganisms.2020; 8(2): 150. CrossRef - Rhodovarius crocodyli sp. nov., isolated from a crocodile pond
Wen-Ming Chen, Yi-Ru Xie, Der-Shyan Sheu, Jyh-Ming Tsai, Shih-Yi Sheu
International Journal of Systematic and Evolutionary Microbiology.2020; 70(9): 5141. CrossRef - Description of Azoarcus nasutitermitis sp. nov. and Azoarcus rhizosphaerae sp. nov., two nitrogen-fixing species isolated from termite nest and rhizosphere of Ficus religiosa
Shih-Yao Lin, Asif Hameed, Chia-Fang Tsai, Guan-Hua Huang, Yi-Han Hsu, Chiu-Chung Young
Antonie van Leeuwenhoek.2020; 113(7): 933. CrossRef -
Cohnella fermenti sp. nov., isolated from a fermentation process
Shih-Yao Lin, Wen-Ming Chen, Asif Hameed, Guan-Hua Huang, Mei-Hua Hung, Chiu-Chung Young
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(4): 2602. CrossRef -
Gimesia chilikensis sp. nov., a haloalkali-tolerant planctomycete isolated from Chilika lagoon and emended description of the genus Gimesia
Dhanesh Kumar, Kumar Gaurav, Sreya PK, Shabbir A., Jagadeeshwari Uppada, Sasikala Ch., Ramana Ch.V.
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(6): 3647. CrossRef -
Salinibius halmophilus gen. nov., sp. nov., isolated from a marine solar saltern
Si-Kai Ling, Hui Zhang, Nan-Nan Wang, Guan-Jun Chen, Zong-Jun Du
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(2): 1079. CrossRef - Metagenomic profiling of ammonia- and methane-oxidizing microorganisms in two sequential rapid sand filters
Lianna Poghosyan, Hanna Koch, Jeroen Frank, Maartje A.H.J. van Kessel, Geert Cremers, Theo van Alen, Mike S.M. Jetten, Huub J.M. Op den Camp, Sebastian Lücker
Water Research.2020; 185: 116288. CrossRef -
“
Candidatus
Desulfobulbus rimicarensis,” an Uncultivated Deltaproteobacterial Epibiont from the Deep-Sea Hydrothermal Vent Shrimp
Rimicaris exoculata
Lijing Jiang, Xuewen Liu, Chunming Dong, Zhaobin Huang, Marie-Anne Cambon-Bonavita, Karine Alain, Li Gu, Shasha Wang, Zongze Shao, Shuang-Jiang Liu
Applied and Environmental Microbiology.2020;[Epub] CrossRef -
Nocardioides convexus sp. nov. and Nocardioides anomalus sp. nov., isolated from soil and mineral water
Yuna Park, Qingzhen Liu, Soohyun Maeng, Won Jung Choi, Yoonjee Chang, Wan-Taek Im
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(12): 6402. CrossRef - Mesorhizobium alexandrii sp. nov., isolated from phycosphere microbiota of PSTs-producing marine dinoflagellate Alexandrium minutum amtk4
Xi Yang, Zhiwei Jiang, Jing Zhang, Xin Zhou, Xiaoling Zhang, Lei Wang, Ting Yu, Zhilin Wang, Jinlong Bei, Bo Dong, Zhangyan Dai, Qiao Yang, Zhuang Chen
Antonie van Leeuwenhoek.2020; 113(7): 907. CrossRef - Description of Massilia rubra sp. nov., Massilia aquatica sp. nov., Massilia mucilaginosa sp. nov., Massilia frigida sp. nov., and one Massilia genomospecies isolated from Antarctic streams, lakes and regoliths
Pavla Holochová, Ivana Mašlaňová, Ivo Sedláček, Pavel Švec, Stanislava Králová, Vojtěch Kovařovic, Hans-Jürgen Busse, Eva Staňková, Miloš Barták, Roman Pantůček
Systematic and Applied Microbiology.2020; 43(5): 126112. CrossRef - Paradesulfovibrio onnuriensis gen. nov., sp. nov., a chemolithoautotrophic sulfate-reducing bacterium isolated from the Onnuri vent field of the Indian Ocean and reclassification of Desulfovibrio senegalensis as Paradesulfovibrio senegalensis comb. nov.
Yun Jae Kim, Jhung-Ahn Yang, Jae Kyu Lim, Mi-Jeong Park, Sung-Hyun Yang, Hyun Sook Lee, Sung Gyun Kang, Jung-Hyun Lee, Kae Kyoung Kwon
Journal of Microbiology.2020; 58(4): 252. CrossRef - Litorilituus lipolyticus sp. nov., isolated from intertidal sand of the Yellow Sea in China, and emended description of Colwellia asteriadis
Ang Liu, Yan-Jiao Zhang, Qing-Jie Xue, Hui Wang, Yuan-Yuan Yang, Feng Du, Long-Yu Zhao, Hong-Hua Zhang, Yun-Qing Li, Xiu-Zhen Li
Antonie van Leeuwenhoek.2020; 113(4): 449. CrossRef - Wocania indica gen. nov., sp. nov., isolated from deep sea hydrothermal sulfide in the northwest Indian Ocean, and proposal to reclassify Flaviramulus ichthyoenteri as Wocania ichthyoenteri comb. nov.
Yang He, Xiang Zeng, Jinbo Xiong, Qiliang Lai, Jianyang Li, Zongze Shao
International Journal of Systematic and Evolutionary Microbiology.2020; 70(10): 5488. CrossRef - Whole genome analysis calls for a taxonomic rearrangement of the genus Colwellia
Ang Liu, Yan-Jiao Zhang, Peng Cheng, Ya-Jie Peng, Jochen Blom, Qing-Jie Xue
Antonie van Leeuwenhoek.2020; 113(7): 919. CrossRef -
Leeia aquatica sp. nov., isolated from freshwater
Jaeho Song, Yochan Joung, Shan-Hui Li, Juchan Hwang, Jang-Cheon Cho
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(11): 5848. CrossRef -
Aurantiacibacter rhizosphaerae sp. nov., isolated from a rhizosphere mudflat of a halophyte and proposal to reclassify Erythrobacter suaedae Lee et al. 2019. and Erythrobacter flavus Yoon et al. 2003 as Aurantiacibacter suaedae comb. nov. and
Soon Dong Lee, In Seop Kim
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(12): 6257. CrossRef - Hydrogen and Carbon Monoxide-Utilizing Kyrpidia spormannii Species From Pantelleria Island, Italy
Carmen Hogendoorn, Arjan Pol, Nunzia Picone, Geert Cremers, Theo A. van Alen, Antonina L. Gagliano, Mike S. M. Jetten, Walter D’Alessandro, Paola Quatrini, Huub J. M. Op den Camp
Frontiers in Microbiology.2020;[Epub] CrossRef -
Fundicoccus ignavus gen. nov., sp. nov., a novel genus of the family Aerococcaceae isolated from bulk tank milk
Annemarie Siebert, Christopher Huptas, Mareike Wenning, Siegfried Scherer, Etienne V. Doll
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(8): 4774. CrossRef -
Flammeovirga pectinis sp. nov., isolated from the gut of the Korean scallop, Patinopecten yessoensis
Yun-Seok Jeong, Woorim Kang, Hojun Sung, June-Young Lee, Ji-Hyun Yun, Na-Ri Shin, Hyun Sik Kim, So-Yeon Lee, Jeong Eun Han, Jae-Yun Lee, Euon Jung Tak, Pil Soo Kim, Dong-Wook Hyun, Mi-Ja Jung, Tae Woong Whon, Myung-Suk Kang, Ki-Eun Lee, Byoung-Hee Lee, Ji
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(1): 499. CrossRef - High counts of thermophilic spore formers in dairy powders originate from persisting strains in processing lines
Anna Dettling, Carolin Wedel, Christopher Huptas, Jörg Hinrichs, Siegfried Scherer, Mareike Wenning
International Journal of Food Microbiology.2020; 335: 108888. CrossRef - Paenibacillus lycopersici sp. nov. and Paenibacillus rhizovicinus sp. nov., isolated from the rhizosphere of tomato (Solanum lycopersicum)
Shin Ae Lee, Tae-Wan Kim, Jun Heo, Mee-Kyung Sang, Jaekyeong Song, Soon-Wo Kwon, Hang-Yeon Weon
Journal of Microbiology.2020; 58(10): 832. CrossRef -
Cerasibacillus terrae sp. nov., isolated from maize field, and emended description of Cerasibacillus quisquiliarum Nakamura et al. 2004
Shih-Yao Lin, Chia-Fang Tsai, Asif Hameed, Chiu-Chung Young
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(11): 5725. CrossRef - Microbial community composition and functional potential in Bothnian Sea sediments is linked to Fe and S dynamics and the quality of organic matter
Olivia Rasigraf, Niels A. G. M. van Helmond, Jeroen Frank, Wytze K. Lenstra, Matthias Egger, Caroline P. Slomp, Mike S. M. Jetten
Limnology and Oceanography.2020;[Epub] CrossRef - Metagenomic Association Analysis of Gut Symbiont Limosilactobacillus reuteri Without Host-Specific Genome Isolation
Sein Park, Martin Steinegger, Ho-Seong Cho, Jongsik Chun
Frontiers in Microbiology.2020;[Epub] CrossRef - Methylobacterium symbioticum sp. nov., a new species isolated from spores of Glomus iranicum var. tenuihypharum
Jose Antonio Pascual, Margarita Ros, Jesus Martínez, Francisco Carmona, Antonio Bernabé, Rocío Torres, Teresa Lucena, Rosa Aznar, David R. Arahal, Felix Fernández
Current Microbiology.2020; 77(9): 2031. CrossRef -
Sphingomonas solaris sp. nov., isolated from a solar panel in Boston, Massachusetts
Kristie Tanner, Christopher P. Mancuso, Juli Peretó, Ahmad S. Khalil, Cristina Vilanova, Javier Pascual
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(3): 1814. CrossRef -
Adhaeribacter rhizoryzae sp. nov., a fibrillar matrix-producing bacterium isolated from the rhizosphere of rice plant
Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Byungjo Lee, Wonhee Jang, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(10): 5382. CrossRef - Genomic Comparison of Insect Gut Symbionts from Divergent Burkholderia Subclades
Kazutaka Takeshita, Yoshitomo Kikuchi
Genes.2020; 11(7): 744. CrossRef -
Duganella albus sp. nov., Duganella aquatilis sp. nov., Duganella pernnla sp. nov. and Duganella levis sp. nov., isolated from subtropical streams in China
Huibin Lu, Tongchu Deng, Feifei Liu, Yonghong Wang, Xunan Yang, Meiying Xu
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(6): 3801. CrossRef - Description of Maribellus sediminis sp. nov., a marine nitrogen-fixing bacterium isolated from sediment of cordgrass and mangrove
Zhaobin Huang, Yuzhong Hu, Qiliang Lai, Yu Guo
Systematic and Applied Microbiology.2020; 43(4): 126099. CrossRef -
Ningiella ruwaisensis gen. nov., sp. nov., a member of the family Alteromonadaceae isolated from marine water of the Arabian Gulf
Rashmi Fotedar, Matthew E. Caldwell, Krithivasan Sankaranarayanan, Aisha Al -Zeyara, Ameena Al-Malki, Ridhima Kaul, Masoud Al Marri, Hamad S. Al -Shamari, Paul A. Lawson
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(7): 4130. CrossRef -
Maribacter algicola sp. nov., isolated from a marine red alga, Porphyridium marinum, and transfer of Maripseudobacter aurantiacus Chen et al. 2017 to the genus Maribacter as Maribacter aurantiacus comb. nov.
Shehzad Abid Khan, Sang Eun Jeong, Ju Hye Baek, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(2): 797. CrossRef - In silico functional and evolutionary analyses of rubber oxygenases (RoxA and RoxB)
Vikas Sharma, Fauzul Mobeen, Tulika Prakash
3 Biotech.2020;[Epub] CrossRef - Improved Metagenomic Taxonomic Profiling Using a Curated Core Gene-Based Bacterial Database Reveals Unrecognized Species in the Genus Streptococcus
Mauricio Chalita, Sung-min Ha, Yeong Ouk Kim, Hyun-Seok Oh, Seok-Hwan Yoon, Jongsik Chun
Pathogens.2020; 9(3): 204. CrossRef -
Klebsiella indica sp. nov., isolated from the surface of a tomato
Sukriti Gujarati, Diptaraj Chaudhari, Ashwini Hagir, Mitesh Khairnar, Yogesh Shouche, Praveen Rahi
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(5): 3278. CrossRef -
Cupriavidus agavae sp. nov., a species isolated from Agave L. rhizosphere in northeast Mexico
Ivan Arroyo-Herrera, Jessica Maldonado-Hernández, Fernando-Uriel Rojas-Rojas, Georgina Meza-Radilla, Violeta Larios-Serrato, María-Soledad Vásquez-Murrieta, William B. Whitman, Paulina Estrada-de los Santos
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(7): 4165. CrossRef - Filimonas effusa sp. nov., isolated from a freshwater river
Wen-Ming Chen, Tzu-Ying Chen, Zhi-Hao Li, Soon-Wo Kwon, Shih-Yi Sheu
International Journal of Systematic and Evolutionary Microbiology.2020; 70(3): 1508. CrossRef -
Duganella lactea sp. nov., Duganella guangzhouensis sp. nov., Duganella flavida sp. nov. and Massilia rivuli sp. nov., isolated from a subtropical stream in PR China and proposal to reclassify Duganella ginsengisoli as Massilia ginsengisoli c
Huibin Lu, Tongchu Deng, Feifei Liu, Yonghong Wang, Xunan Yang, Meiying Xu
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(8): 4822. CrossRef - Genome-based reclassification of Paenibacillus jamilae Aguilera et al. 2001 as a later heterotypic synonym of Paenibacillus polymyxa (Prazmowski 1880) Ash et al. 1994
Min-Jung Kwak, Seon-Bin Choi, Sung-min Ha, Eun Hye Kim, Byung-Yong Kim, Jongsik Chun
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(5): 3134. CrossRef - Aequoribacter fuscus gen. nov., sp. nov., a new member of the family Halieaceae, isolated from coastal seawater
Shan-Hui Li, Jaeho Song, Ilnam Kang, Juchan Hwang, Jang-Cheon Cho
Journal of Microbiology.2020; 58(6): 463. CrossRef - Psychroflexus maritimus sp. nov., isolated from coastal sediment
Yan-Lin Zhong, Rui Zhang, Xiao-Yu Zhang, Li-Xue Yu, Meng-Fan Zhao, Zong-Jun Du
Archives of Microbiology.2020; 202(8): 2127. CrossRef - Ketobacter nezhaii sp. nov., a marine bacterium isolated from coastal sediment
Jianyang Li, Mingming Qi, Qiliang Lai, Xianhua Liu, Zongze Shao
International Journal of Systematic and Evolutionary Microbiology.2020; 70(9): 4960. CrossRef -
Sphingobacterium chungjuense sp. nov., isolated from a freshwater lake
Jaeho Song, Yochan Joung, Shan-Hui Li, Juchan Hwang, Jang-Cheon Cho
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(12): 6126. CrossRef -
Paracoccus xiamenensis sp. nov., isolated from seawater on the Xiamen
Lina Lyu, Bin Zhi, Qiliang Lai, Zongze Shao, Zhiqiang Yu
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(7): 4285. CrossRef - Paludisphaera soli sp. nov., a new member of the family Isosphaeraceae isolated from high altitude soil in the Western Himalaya
Rishabh Kaushik, Meesha Sharma, Kumar Gaurav, U. Jagadeeshwari, A. Shabbir, Ch. Sasikala, Ch. V. Ramana, Maharaj K. Pandit
Antonie van Leeuwenhoek.2020; 113(11): 1663. CrossRef - Lacibacter luteus sp. nov., isolated from a freshwater river
Shih-Yi Sheu, Tzu-Ying Chen, Soon-Wo Kwon, Wen-Ming Chen
International Journal of Systematic and Evolutionary Microbiology.2020; 70(2): 1404. CrossRef -
Flavobacterium ichthyis sp. nov., isolated from a fish pond
Wen-Ming Chen, Che-Chia Yang, Ceshing Sheu, Soon-Wo Kwon, Shih-Yi Sheu
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(9): 5075. CrossRef -
Mucilaginibacter agri sp. nov. and Mucilaginibacter humi sp. nov., isolated from soil
Ye Lin Seo, Shehzad Abid Khan, Hyung Min Kim, Byung Hee Chun, Dong Min Han, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(8): 4616. CrossRef -
Ferrimonas sediminicola sp. nov. and Ferrimonas aestuarii sp. nov., Fe(III)-reducing bacteria isolated from marine environments
Juchan Hwang, Jaeho Song, Yeonjung Lim, Yochan Joung, Jang-Cheon Cho
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(9): 4927. CrossRef -
Patiriisocius marinistellae gen. nov., sp. nov., isolated from the starfish Patiria pectinifera, and reclassification of Ulvibacter marinus as a member of the genus Patiriisocius comb. nov.
Keisuke Kawano, Natsumi Ushijima, Minoru Kihara, Hideomi Itoh
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(7): 4119. CrossRef - Integration of culture-dependent and independent methods provides a more coherent picture of the pig gut microbiome
Gavin J Fenske, Sudeep Ghimire, Linto Antony, Jane Christopher-Hennings, Joy Scaria
FEMS Microbiology Ecology.2020;[Epub] CrossRef -
Pseudomonas karstica sp. nov. and Pseudomonas spelaei sp. nov., isolated from calcite moonmilk deposits from caves
Pavel Švec, Marcel Kosina, Michal Zeman, Pavla Holochová, Stanislava Králová, Eva Němcová, Lenka Micenková, Urvashi, Vipin Gupta, Utkarsh Sood, Rup Lal, Suresh Korpole, Ivo Sedláček
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(9): 5131. CrossRef - Extremophilic nitrite-oxidizing Chloroflexi from Yellowstone hot springs
Eva Spieck, Michael Spohn, Katja Wendt, Eberhard Bock, Jessup Shively, Jeroen Frank, Daniela Indenbirken, Malik Alawi, Sebastian Lücker, Jennifer Hüpeden
The ISME Journal.2020; 14(2): 364. CrossRef -
Novosphingobium ovatum sp. nov., isolated from a freshwater mesocosm
Wen-Ming Chen, Cheng-Ye Cai, Der-Shyan Sheu, Jyh-Ming Tsai, Shih-Yi Sheu
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(10): 5243. CrossRef -
Sunxiuqinia indica sp. nov., isolated from deep sea
Jianyang Li, Mingming Qi, Qiliang Lai, Guangyi Wang, Zongze Shao
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(7): 4186. CrossRef - Saccharibacillus brassicae sp. nov., an endophytic bacterium isolated from kimchi cabbage (Brassica rapa subsp. pekinensis) seeds
Lingmin Jiang, Chan Ju Lim, Song-Gun Kim, Jae Cheol Jeong, Cha Young Kim, Dae-Hyuk Kim, Suk Weon Kim, Jiyoung Lee
Journal of Microbiology.2020; 58(1): 24. CrossRef -
Sphingorhabdus lacus sp. nov. and Sphingorhabdus profundilacus sp. nov., isolated from freshwater environments
Miri Park, Ilsuk Jung, Jaeho Song, Jang-Cheon Cho
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(5): 3202. CrossRef - Novosphingobium umbonatum sp. nov., isolated from a freshwater mesocosm
Shih-Yi Sheu, Cheng-Ye Cai, Soon-Wo Kwon, Wen-Ming Chen
International Journal of Systematic and Evolutionary Microbiology.2020; 70(2): 1122. CrossRef -
Pseudooceanicola pacificus sp. nov., isolated from deep-sea sediment of the Pacific Ocean
Lina Lyu, Qiliang Lai, Jianyang Li, Zongze Shao, Zhiqiang Yu
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(7): 4372. CrossRef -
Halioglobus maricola sp. nov., isolated from coastal seawater
Shan-Hui Li, Jaeho Song, Yeonjung Lim, Yochan Joung, Ilnam Kang, Jang-Cheon Cho
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(3): 1868. CrossRef -
Cryobacterium ruanii sp. nov. and Cryobacterium breve sp. nov., isolated from glaciers
Qing Liu, Ji-Hui Tian, Hong-Can Liu, Yu-Guang Zhou, Yu-Hua Xin
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(3): 1918. CrossRef - Prokaryotic sigma factors and their transcriptional counterparts in Archaea and Eukarya
Ana G. Abril, Jose Luis R. Rama, A. Sánchez-Pérez, Tomás G. Villa
Applied Microbiology and Biotechnology.2020; 104(10): 4289. CrossRef -
Nitratireductor alexandrii sp. nov., from phycosphere microbiota of toxic marine dinoflagellate Alexandrium tamarense
Zhiwei Jiang, Yuhan Duan, Xi Yang, Bing Yao, Teer Zeng, Xiaoyan Wang, Qi Feng, Min Qi, Qiao Yang, Xiaoling Zhang
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(7): 4390. CrossRef -
Croceicoccus sediminis sp. nov., isolated from coastal sediment
Zhaobin Huang, Aoqiang Zhang, Qiliang Lai, Jianjun Yuan
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(2): 779. CrossRef - Signs of a phyllospheric lifestyle in the genome of the stress-tolerant strain Azospirillum brasilense Az19
Julia E. García, Maria M. Labarthe, Luciana A. Pagnussat, Melina Amenta, Cecilia M. Creus, Guillermo A. Maroniche
Systematic and Applied Microbiology.2020; 43(6): 126130. CrossRef - Genomic, metabolic and phenotypic variability shapes ecological differentiation and intraspecies interactions of Alteromonas macleodii
Hanna Koch, Nora Germscheid, Heike M. Freese, Beatriz Noriega-Ortega, Dominik Lücking, Martine Berger, Galaxy Qiu, Ezequiel M. Marzinelli, Alexandra H. Campbell, Peter D. Steinberg, Jörg Overmann, Thorsten Dittmar, Meinhard Simon, Matthias Wietz
Scientific Reports.2020;[Epub] CrossRef - Reinekea thalattae sp. nov., a New Species of the Genus Reinekea Isolated from Surface Seawater in Sehwa Beach
Inhyup Kim, Geeta Chhetri, Jiyoun Kim, Minchung Kang, Taegun Seo
Current Microbiology.2020; 77(12): 4174. CrossRef - All ANIs are not created equal: implications for prokaryotic species boundaries and integration of ANIs into polyphasic taxonomy
Marike Palmer, Emma T. Steenkamp, Jochen Blom, Brian P. Hedlund, Stephanus N. Venter
International Journal of Systematic and Evolutionary Microbiology
.2020; 70(4): 2937. CrossRef - Rhizobium indicum sp. nov., isolated from root nodules of pea (Pisum sativum) cultivated in the Indian trans-Himalayas
Praveen Rahi, Pranoti Giram, Diptaraj Chaudhari, George C. diCenzo, Shashi Kiran, Aastha Khullar, Mahima Chandel, Sayali Gawari, Anagha Mohan, Shraddha Chavan, Bhagyashree Mahajan
Systematic and Applied Microbiology.2020; 43(5): 126127. CrossRef - Nonlabens xiamenensis sp. nov., isolated from coastal seawater
Zhaobin Huang, Yaping Du, Qiliang Lai, Zongze Shao
Antonie van Leeuwenhoek.2019; 112(8): 1263. CrossRef - Amniculibacterium aquaticum gen. nov., sp. nov., a new member of the family Flavobacteriaceae isolated from a stream
Wen-Ming Chen, Ya-Ping Guo, Ceshing Sheu, Shih-Yi Sheu
Archives of Microbiology.2019; 201(8): 1119. CrossRef - Discovery of a functional, contracted heme-binding motif within a multiheme cytochrome
Christina Ferousi, Simon Lindhoud, Frauke Baymann, Eric R. Hester, Joachim Reimann, Boran Kartal
Journal of Biological Chemistry.2019; 294(45): 16953. CrossRef -
Flavobacterium piscinae sp. nov., isolated from a fish pond
Wen-Ming Chen, Ya-Ping Guo, Soon-Wo Kwon, Shih-Yi Sheu
International Journal of Systematic and Evolutionary Microbiology
.2019; 69(6): 1775. CrossRef - Description of Sphingobium psychrophilum sp. nov., a cold-adapted bacterium isolated from Arctic soil
Ram Hari Dahal, Dhiraj Kumar Chaudhary, Dong-Uk Kim, Jaisoo Kim
International Journal of Systematic and Evolutionary Microbiology
.2019;[Epub] CrossRef - Uncultured Nitrospina-like species are major nitrite oxidizing bacteria in oxygen minimum zones
Xin Sun, Linnea F M Kop, Maggie C Y Lau, Jeroen Frank, Amal Jayakumar, Sebastian Lücker, Bess B Ward
The ISME Journal.2019; 13(10): 2391. CrossRef - Sphingomonas crocodyli sp. nov., isolated from a crocodile pond
Shih-Yi Sheu, Yi-Ru Xie, Soon-Wo Kwon, Ceshing Sheu, Wen-Ming Chen
International Journal of Systematic and Evolutionary Microbiology.2019; 69(7): 2153. CrossRef - N-glycan Utilization by Bifidobacterium Gut Symbionts Involves a Specialist β-Mannosidase
Rosa Lorizolla Cordeiro, Renan Augusto Siqueira Pirolla, Gabriela Felix Persinoti, Fábio Cesar Gozzo, Priscila Oliveira de Giuseppe, Mario Tyago Murakami
Journal of Molecular Biology.2019; 431(4): 732. CrossRef - Identification of Molecular Markers That Are Specific to the Class Thermoleophilia
Danyu Hu, Yang Zang, Yingjin Mao, Beile Gao
Frontiers in Microbiology.2019;[Epub] CrossRef -
Neobacillus endophyticus sp. nov., an endophytic bacterium isolated from Selaginella involvens roots
Lingmin Jiang, Myoung Hui Lee, Jae Cheol Jeong, Dae-Hyuk Kim, Cha Young Kim, Suk Weon Kim, Jiyoung Lee
International Journal of Systematic and Evolutionary Microbiology
.2019;[Epub] CrossRef - Stagnimonas aquatica gen. nov., sp. nov., a new member of the family Nevskiaceae isolated from a freshwater mesocosm
Shih-Yi Sheu, Tzu-Ying Chen, Chiu-Chung Young, Wen-Ming Chen
International Journal of Systematic and Evolutionary Microbiology.2019; 69(6): 1606. CrossRef - Hydrocarboniclastica marina gen. nov., sp. nov., a marine hydrocarbonoclastic bacterium isolated from an in situ enriched hydrocarbon-degrading consortium in sea sediment
Chunming Dong, Tiantian Ma, Renju Liu, Qiliang Lai, Zongze Shao
International Journal of Systematic and Evolutionary Microbiology.2019; 69(8): 2250. CrossRef -
Anaerosacchariphilus polymeriproducens gen. nov., sp. nov., an anaerobic bacterium isolated from a salt field
Wonduck Kim, Sung-Hyun Yang, Mi-Jeong Park, Jihye Oh, Jung-Hyun Lee, Kae Kyoung Kwon
International Journal of Systematic and Evolutionary Microbiology
.2019; 69(7): 1934. CrossRef -
Flavobacterium baculatum sp. nov., a carotenoid and flexirubin-type pigment producing species isolated from flooded paddy field
Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Minchung Kang, Byungjo Lee, Wonhee Jang, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2019;[Epub] CrossRef -
Oceaniradius stylonematis gen. nov., sp. nov., isolated from a red alga, Stylonema cornu-cervi
Sang Eun Jeong, Kyung Hyun Kim, Duckhyun Lhee, Hwan Su Yoon, Zhe-Xue Quan, En-Young Lee, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology
.2019; 69(7): 1967. CrossRef - Pradoshia eiseniae gen. nov., sp. nov., a spore-forming member of the family Bacillaceae capable of assimilating 3-nitropropionic acid, isolated from the anterior gut of the earthworm Eisenia fetida
Tilak Saha, Vivek K. Ranjan, Sriradha Ganguli, Subarna Thakur, Biswanath Chakraborty, Partha Barman, Wriddhiman Ghosh, Ranadhir Chakraborty
International Journal of Systematic and Evolutionary Microbiology.2019; 69(5): 1265. CrossRef - Rhizobium chutanense sp. nov., isolated from root nodules of Phaseolus vulgaris in China
Yunyun Huo, Wenjun Tong, Juanjuan Wang, Fang Wang, Wenqing Bai, Entao Wang, Peng Shi, Weimin Chen, Gehong Wei
International Journal of Systematic and Evolutionary Microbiology.2019; 69(7): 2049. CrossRef - Complete nitrification: insights into the ecophysiology of comammox Nitrospira
Hanna Koch, Maartje A. H. J. van Kessel, Sebastian Lücker
Applied Microbiology and Biotechnology.2019; 103(1): 177. CrossRef - Paraburkholderia telluris sp. nov., isolated from subtropical forest soil
Sen-yang Xiao, Zeng-hong Gao, Zi Yang, Jie-yi Bi, Li-hong Qiu
International Journal of Systematic and Evolutionary Microbiology.2019; 69(5): 1274. CrossRef -
Pseudorhodobacter turbinis sp. nov., isolated from the gut of the Korean turban shell, Turbo cornutus
Yun-Seok Jeong, Woorim Kang, June-Young Lee, Hojun Sung, Hyun Sik Kim, Jeong-Eun Han, Euon Jung Tak, So-Yeon Lee, Jae-Yun Lee, Pil Soo Kim, Dong-Wook Hyun, Mi-Ja Jung, Jin-Woo Bae
International Journal of Systematic and Evolutionary Microbiology
.2019;[Epub] CrossRef - Isolation and genome analysis of Winogradskyella algicola sp. nov., the dominant bacterial species associated with the green alga Dunaliella tertiolecta
Jaeho Song, Yeonjung Lim, Hye-Jin Jang, Yochan Joung, Ilnam Kang, Seong-Joo Hong, Choul-Gyun Lee, Jang-Cheon Cho
Journal of Microbiology.2019; 57(11): 982. CrossRef -
Jannaschia marina sp. nov., isolated from the gut of a gastropod, Onchidium reevesii
Si Chen, Mengyuan He, Qiliang Lai, Ying Xu, Chenjing Shang
International Journal of Systematic and Evolutionary Microbiology
.2019;[Epub] CrossRef - Allopseudarcicella aquatilis gen. nov., sp. nov., isolated from freshwater
Haneul Kim, Heeyoung Kang, Kiseong Joh
International Journal of Systematic and Evolutionary Microbiology.2019; 69(11): 3574. CrossRef - Paraburkholderia pallida sp. nov. and Paraburkholderia silviterrae sp. nov., isolated from forest soil
Sen-yang Xiao, Zeng-hong Gao, Qin-hua Lin, Li-hong Qiu
International Journal of Systematic and Evolutionary Microbiology.2019; 69(12): 3777. CrossRef -
Aquincola rivuli sp. nov., isolated from a freshwater stream
Shih-Yi Sheu, Tsai-Ying Hsieh, Wen-Ming Chen
International Journal of Systematic and Evolutionary Microbiology
.2019; 69(8): 2226. CrossRef - Flavobacterium amnicola sp. nov., isolated from a sub-tropical stream
Shih-Yi Sheu, Ya-Ping Guo, Wen-Ming Chen
International Journal of Systematic and Evolutionary Microbiology.2019; 69(8): 2283. CrossRef -
Shimia thalassica sp. nov., and reclassification of Pseudopelagicola gijangensis as Shimia gijangensis comb. nov., and Thalassobius activus as Cognatishimia activa comb. nov.
David R. Arahal, Alexandra La Mura, Teresa Lucena, Lidia Rodrigo-Torres, Rosa Aznar, María J. Pujalte
International Journal of Systematic and Evolutionary Microbiology
.2019; 69(11): 3405. CrossRef - Clostridium indicum sp. nov., a novel anaerobic bacterium isolated from the sludge of an industrial effluent
Krishna Gundawar, Sumeeta Kumari, Shikha Sharma, Vishakha Grover, Prabhu B. Patil, Suresh Korpole
International Journal of Systematic and Evolutionary Microbiology.2019; 69(3): 672. CrossRef -
Peribacillus faecalis sp. nov., a moderately halophilic bacterium isolated from the faeces of a cow
Lingmin Jiang, Won Yong Jung, Zhun Li, Mi-Kyung Lee, Seung-Hwan Park, Se Won Kang, Jung-Sook Lee, Hyunjung Jung, Tai-Young Hur, Hyeun Bum Kim, Jae-Kyung Kim, Ju-Hoon Lee, Ju Huck Lee, Jiyoung Lee
International Journal of Systematic and Evolutionary Microbiology
.2019;[Epub] CrossRef -
Mucilaginibacter aquatilis sp. nov., Mucilaginibacter arboris sp. nov., and Mucilaginibacter ginkgonis sp. nov., novel bacteria isolated from freshwater and tree bark
Heeyoung Kang, Haneul Kim, Seokhyeon Bae, Kiseong Joh
International Journal of Systematic and Evolutionary Microbiology
.2019;[Epub] CrossRef -
Devosia naphthalenivorans sp. nov., isolated from East Pacific Ocean sediment
Yong Chen, Sidong Zhu, Danqiu Lin, Xing Wang, Jifang Yang, Jigang Chen
International Journal of Systematic and Evolutionary Microbiology
.2019; 69(7): 1974. CrossRef - Parashewanella tropica sp. nov., a mesophilic bacterium isolated from a marine sponge from Chuuk lagoon, Federated States of Micronesia, and emended description of the genus Parashewanella
Teddy Namirimu, Mi-Jeong Park, Sung-Hyun Yang, Young-Gun Zo, Kae Kyoung Kwon
International Journal of Systematic and Evolutionary Microbiology.2019; 69(10): 3256. CrossRef -
Histidinibacterium lentulum gen. nov., sp. nov., a marine bacterium from the culture broth of marine microalga Picochlorum sp. 122
Guanghua Wang, Shuailiang Xu, Hongfei Su, Biao Chen, Jiayuan Liang, Wen Huang, Yinghui Wang, Kefu Yu
International Journal of Systematic and Evolutionary Microbiology.2019; 69(2): 578. CrossRef - Apibacter muscae sp. nov., a novel bacterial species isolated from house flies
Rahel Park, Maria C. Dzialo, Donat Nsabimana, Bart Lievens, Kevin J. Verstrepen
International Journal of Systematic and Evolutionary Microbiology.2019; 69(11): 3586. CrossRef -
Pseudomonas nitrititolerans sp. nov., a nitrite-tolerant denitrifying bacterium isolated from a nitrification/denitrification bioreactor
Ji-Sen Peng, Ying Liu, Lei Yan, Ting-Ting Hou, Hong-Can Liu, Yu-Guang Zhou, Zhi-Pei Liu
International Journal of Systematic and Evolutionary Microbiology
.2019; 69(8): 2471. CrossRef - Geomonas oryzae gen. nov., sp. nov., Geomonas edaphica sp. nov., Geomonas ferrireducens sp. nov., Geomonas terrae sp. nov., Four Ferric-Reducing Bacteria Isolated From Paddy Soil, and Reclassification of Three Species of the Genus Geobacter as Members of
Zhenxing Xu, Yoko Masuda, Hideomi Itoh, Natsumi Ushijima, Yutaka Shiratori, Keishi Senoo
Frontiers in Microbiology.2019;[Epub] CrossRef - Comparative Genomic and Phylogenomic Analyses Clarify Relationships Within and Between Bacillus cereus and Bacillus thuringiensis: Proposal for the Recognition of Two Bacillus thuringiensis Genomovars
Inwoo Baek, Kihyun Lee, Michael Goodfellow, Jongsik Chun
Frontiers in Microbiology.2019;[Epub] CrossRef -
Flavobacterium lotistagni sp. nov. and Flavobacterium celericrescens sp. nov., isolated from freshwater habitats
Jia-Hong Wu, Ya-Xiu You, Chiu-Chung Young, Soon-Wo Kwon, Wen-Ming Chen
International Journal of Systematic and Evolutionary Microbiology
.2019;[Epub] CrossRef - Proposal of Parashewanella gen. nov. to accommodate Parashewanella curva sp. nov. and Parashewanella spongiae comb. nov. in the Shewanellaceae
Shuailiang Xu, Kefu Yu, Hongfei Su, Biao Chen, Wen Huang, Jiayuan Liang, Yinghui Wang, Guanghua Wang
International Journal of Systematic and Evolutionary Microbiology
.2019; 69(5): 1259. CrossRef - Sulfitobacter profundi sp. nov., isolated from deep seawater
Jaeho Song, Hye-Jin Jang, Yochan Joung, Ilnam Kang, Jang-Cheon Cho
Journal of Microbiology.2019; 57(8): 661. CrossRef -
Lujinxingia litoralis gen. nov., sp. nov. and Lujinxingia sediminis sp. nov., two new representatives in the order Bradymonadales
Ling-Yun Guo, Chang-Ming Li, Shuo Wang, Da-Shuai Mu, Zong-Jun Du
International Journal of Systematic and Evolutionary Microbiology
.2019; 69(9): 2767. CrossRef - Syntrophotalea acetylenivorans sp. nov., a diazotrophic, acetylenotrophic anaerobe isolated from intertidal sediments
Shaun M. Baesman, John M. Sutton, Janna L. Fierst, Denise M. Akob, Ronald S. Oremland
International Journal of Systematic and Evolutionary Microbiology.2019;[Epub] CrossRef - Adaptations of Alteromonas sp. 76-1 to Polysaccharide Degradation: A CAZyme Plasmid for Ulvan Degradation and Two Alginolytic Systems
Hanna Koch, Heike M. Freese, Richard L. Hahnke, Meinhard Simon, Matthias Wietz
Frontiers in Microbiology.2019;[Epub] CrossRef -
Sulfurovum indicum sp. nov., a novel hydrogen- and sulfur-oxidizing chemolithoautotroph isolated from a deep-sea hydrothermal plume in the Northwestern Indian Ocean
Shaobin Xie, Shasha Wang, Dengfeng Li, Zongze Shao, Qiliang Lai, Yejian Wang, Mingcong Wei, Xiqiu Han, Lijing Jiang
International Journal of Systematic and Evolutionary Microbiology
.2019;[Epub] CrossRef -
Bacillus safensis subsp. osmophilus subsp. nov., isolated from condensed milk, and description of Bacillus safensis subsp. safensis subsp. nov.
Ana G. Abril, Jose Luis R. Rama, Lucia Feijoo-Siota, Pilar Calo-Mata, Sergio Salazar, Alvaro Peix, Encarna Velázquez, Tomás G. Villa
International Journal of Systematic and Evolutionary Microbiology.2019; 69(1): 189. CrossRef - Pseudomethylobacillus aquaticus gen. nov., sp. nov., a new member of the family Methylophilaceae isolated from an artificial reservoir
Ceshing Sheu, Cheng-Ye Cai, Shih-Yi Sheu, Zhi-Hao Li, Wen-Ming Chen
International Journal of Systematic and Evolutionary Microbiology.2019; 69(11): 3551. CrossRef - Metabolic Overlap in Environmentally Diverse Microbial Communities
Eric R. Hester, Mike S. M. Jetten, Cornelia U. Welte, Sebastian Lücker
Frontiers in Genetics.2019;[Epub] CrossRef - Application of the Whole Genome-Based Bacterial Identification System, TrueBac ID, Using Clinical Isolates That Were Not Identified With Three Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry (MALDI-TOF MS) Systems
Sung-Min Ha, Chang Ki Kim, Juhye Roh, Jung-Hyun Byun, Seung-Jo Yang, Seon-Bin Choi, Jongsik Chun, Dongeun Yong
Annals of Laboratory Medicine.2019; 39(6): 530. CrossRef - Phylogenetic, genomic, and biogeographic characterization of a novel and ubiquitous marine invertebrate-associated Rickettsiales parasite, Candidatus Aquarickettsia rohweri, gen. nov., sp. nov
J Grace Klinges, Stephanie M Rosales, Ryan McMinds, Elizabeth C Shaver, Andrew A Shantz, Esther C Peters, Michael Eitel, Gert Wörheide, Koty H Sharp, Deron E Burkepile, Brian R Silliman, Rebecca L Vega Thurber
The ISME Journal.2019; 13(12): 2938. CrossRef - Mucilaginibacter limnophilus sp. nov., isolated from a lake
Shih-Yi Sheu, Yi-Ru Xie, Wen-Ming Chen
Journal of Microbiology.2019; 57(11): 967. CrossRef - Diversity of Bacteria Exhibiting Bile Acid-inducible 7α-dehydroxylation Genes in the Human Gut
Marius Vital, Tatjana Rud, Silke Rath, Dietmar H. Pieper, Dirk Schlüter
Computational and Structural Biotechnology Journal.2019; 17: 1016. CrossRef - Paraburkholderia dinghuensis sp. nov., isolated from soil
Jia-cheng Fu, Ying-ying Lv, Jia You, Zeng-hong Gao, Bo-feng Wang, Li-hong Qiu
International Journal of Systematic and Evolutionary Microbiology.2019; 69(6): 1613. CrossRef - Nocardioides zhouii sp. nov., isolated from the Hailuogou Glacier in China
Guo-Qing Zhang, Qing Liu, Hong-Can Liu, Yu-Guang Zhou, Yu-Hua Xin
International Journal of Systematic and Evolutionary Microbiology.2019; 69(8): 2329. CrossRef -
Mucilaginibacter gilvus sp. nov., isolated from Antarctic soil
Yu-Qi Yan, Yong-Xin Hao, Rui-Han He, Zong-Jun Du
International Journal of Systematic and Evolutionary Microbiology
.2019; 69(12): 3885. CrossRef -
Paracoccus amoyensis sp. nov., isolated from the surface seawater along the coast of Xiamen Island, China
Lina Lyu, Qiliang Lai, Jianyang Li, Zhiqiang Yu, Zongze Shao
International Journal of Systematic and Evolutionary Microbiology
.2019;[Epub] CrossRef - Neptunomonas marina sp. nov., isolated from seawater
Wen-Ming Chen, Tsai-Ying Hsieh, Shih-Yi Sheu
Archives of Microbiology.2019; 201(8): 1053. CrossRef -
Acerihabitans arboris gen. nov., sp. nov., a new member of the family Pectobacteriaceae isolated from sap drawn from Acer pictum
Soon Dong Lee, In Seop Kim, Hanna Choe, Ji-Sun Kim
International Journal of Systematic and Evolutionary Microbiology
.2019;[Epub] CrossRef -
Chakrabartia godavariana gen. nov., sp. nov., a novel member of the family Sphingomonadaceae isolated from the Godavari River, India
Kunal Jani, Guang-Da Feng, Hong-Hui Zhu, Om Prakash, Jayashree Bandal, Vinay Rale, Yogesh Shouche, Avinash Sharma
International Journal of Systematic and Evolutionary Microbiology
.2019; 69(8): 2452. CrossRef - Hungateiclostridium mesophilum sp. nov., a mesophilic, cellulolytic and spore-forming bacterium isolated from a biogas fermenter fed with maize silage
Regina Rettenmaier, Martin Gerbaulet, Wolfgang Liebl, Vladimir V. Zverlov
International Journal of Systematic and Evolutionary Microbiology.2019; 69(11): 3567. CrossRef -
Sphingobium terrigena sp. nov., isolated from gasoline-contaminated soil
Yu Jin Park, Kyung Hyun Kim, Dong Min Han, Dong Ho Lee, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology
.2019; 69(8): 2459. CrossRef - Trinickia dinghuensis sp. nov. and Trinickia fusca sp. nov., isolated from forest soil
Zeng-hong Gao, Shu-fen Zhong, Yi-ning Qin, Zi Yang, Ying-ying Lv, Li-hong Qiu
International Journal of Systematic and Evolutionary Microbiology.2019; 69(5): 1390. CrossRef -
Roseithermus sacchariphilus gen. nov., sp. nov. and proposal of Salisaetaceae fam. nov., representing new family in the order Rhodothermales
Mi-Jeong Park, Ji Hye Oh, Sung-Hyun Yang, Kae Kyoung Kwon
International Journal of Systematic and Evolutionary Microbiology
.2019; 69(4): 1213. CrossRef -
Cryobacterium melibiosiphilum sp. nov., a psychrophilic bacterium isolated from glacier ice
Qing Liu, Ji-Hui Tian, Hong-Can Liu, Yu-Guang Zhou, Yu-Hua Xin
International Journal of Systematic and Evolutionary Microbiology
.2019; 69(10): 3276. CrossRef -
Flavobacterium stagni sp. nov., isolated from a freshwater reservoir
Wen-Ming Chen, Ya-Ping Guo, Soon-Wo Kwon, Ceshing Sheu, Shih-Yi Sheu
International Journal of Systematic and Evolutionary Microbiology
.2019; 69(8): 2372. CrossRef - Dyella amyloliquefaciens sp. nov., isolated from forest soil
Jia-cheng Fu, Zeng-hong Gao, Ting-ting Wu, Mei-hong Chen, Li-hong Qiu
International Journal of Systematic and Evolutionary Microbiology.2019; 69(11): 3560. CrossRef - Stenotrophobium rhamnosiphilum gen. nov., sp. nov., isolated from a glacier, proposal of Steroidobacteraceae fam. nov. in Nevskiales and emended description of the family Nevskiaceae
Qing Liu, Hong-Can Liu, Yu-Guang Zhou, Yu-Hua Xin
International Journal of Systematic and Evolutionary Microbiology.2019; 69(5): 1404. CrossRef - Metagenomic recovery of two distinct comammox Nitrospira from the terrestrial subsurface
Lianna Poghosyan, Hanna Koch, Adi Lavy, Jeroen Frank, Maartje A.H.J. van Kessel, Mike S.M. Jetten, Jillian F. Banfield, Sebastian Lücker
Environmental Microbiology.2019; 21(10): 3627. CrossRef - Flavivirga rizhaonensis sp. nov., a marine bacterium isolated from intertidal sand
Ang Liu, Hong-Mei Liu, Feng Du, Shuang Wang, Long-Yu Zhao, Hong-Hua Zhang, Yun-Qing Li, Qing-Jie Xue, Xiu-Zhen Li
Antonie van Leeuwenhoek.2019; 112(11): 1645. CrossRef -
Paraburkholderia acidiphila sp. nov., Paraburkholderia acidisoli sp. nov. and Burkholderia guangdongensis sp. nov., isolated from forest soil, and reclassification of Burkholderia ultramafica as Paraburkholderia ultramafica comb. nov.
Zeng-hong Gao, Qiu-mei Zhang, Ying-ying Lv, You-qi Wang, Bing-nan Zhao, Li-hong Qiu
International Journal of Systematic and Evolutionary Microbiology
.2019;[Epub] CrossRef -
Faecalibacillus intestinalis gen. nov., sp. nov. and Faecalibacillus faecis sp. nov., isolated from human faeces
Boram Seo, Kyungchan Jeon, Inwoo Baek, Yung Mi Lee, Kiwoon Baek, GwangPyo Ko
International Journal of Systematic and Evolutionary Microbiology
.2019; 69(7): 2120. CrossRef -
Hwanghaeella grinnelliae gen. nov., sp. nov., isolated from a marine red alga
Jungeun Kim, Sang Eun Jeong, Shehzad Abid Khan, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology
.2019; 69(11): 3544. CrossRef - Comparative Pangenomics of the Mammalian Gut Commensal Bifidobacterium longum
Korin Albert, Asha Rani, David A. Sela
Microorganisms.2019; 8(1): 7. CrossRef -
Ferruginivarius sediminum gen. nov., sp. nov., isolated from a marine solar saltern
Shuo Wang, Zi-Hui Ye, Nan-Nan Wang, Da-Shuai Mu, Zong-Jun Du
International Journal of Systematic and Evolutionary Microbiology
.2019; 69(10): 3056. CrossRef - Methylobacterium oryzihabitans sp. nov., isolated from water sampled from a rice paddy field
Wen-Ming Chen, Cheng-Ye Cai, Zhi-Hao Li, Chiu-Chung Young, Shih-Yi Sheu
International Journal of Systematic and Evolutionary Microbiology.2019; 69(12): 3843. CrossRef - Genome-based reclassification of Weissella jogaejeotgali as a later heterotypic synonym of Weissella thailandensis
Min-Jung Kwak, Seon-Bin Choi, Byung-Yong Kim, Jongsik Chun
International Journal of Systematic and Evolutionary Microbiology
.2019; 69(12): 3672. CrossRef -
Lysobacter penaei sp. nov., isolated from intestinal content of a Pacific white shrimp (Penaeus vannamei)
Shuaishuai Xu, Anzhang Li, Ming-Xia Zhang, Qing Yao, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology
.2019;[Epub] CrossRef - Taxogenomics Resolves Conflict in the Genus Rhodobacter: A Two and Half Decades Pending Thought to Reclassify the Genus Rhodobacter
G. Suresh, Tushar D. Lodha, B. Indu, Ch. Sasikala, Ch. V. Ramana
Frontiers in Microbiology.2019;[Epub] CrossRef - Flavobacterium sufflavum sp. nov., isolated from a freshwater lake
Wen-Ming Chen, Yi-Ru Xie, Soon-Wo Kwon, Shih-Yi Sheu
International Journal of Systematic and Evolutionary Microbiology.2019; 69(6): 1705. CrossRef -
Oceaniglobus ichthyenteri sp. nov., isolated from the gut microflora of sea bass (Dicentrarchus labrax L.) and emended description of the genus Oceaniglobus
Nan-Nan Wang, Liu-Yan Zhou, Xin-Peng Wang, Ying-Xiu Li, Zong-Jun Du
International Journal of Systematic and Evolutionary Microbiology
.2019; 69(9): 2892. CrossRef -
Ruegeria denitrificans sp. nov., a marine bacterium in the family Rhodobacteraceae with the potential ability for cyanophycin synthesis
David R. Arahal, Teresa Lucena, Lidia Rodrigo-Torres, María J. Pujalte
International Journal of Systematic and Evolutionary Microbiology.2018; 68(8): 2515. CrossRef - Lawsonibacter asaccharolyticus gen. nov., sp. nov., a butyrate-producing bacterium isolated from human faeces
Mitsuo Sakamoto, Takao Iino, Masahiro Yuki, Moriya Ohkuma
International Journal of Systematic and Evolutionary Microbiology.2018; 68(6): 2074. CrossRef - Defining the Species Micromonospora saelicesensis and Micromonospora noduli Under the Framework of Genomics
Raúl Riesco, Lorena Carro, Brenda Román-Ponce, Carlos Prieto, Jochen Blom, Hans-Peter Klenk, Philippe Normand, Martha E. Trujillo
Frontiers in Microbiology.2018;[Epub] CrossRef - Phenotypic and Genomic Properties of Brachybacterium vulturis sp. nov. and Brachybacterium avium sp. nov.
Euon J. Tak, Pil S. Kim, Dong-Wook Hyun, Hyun S. Kim, June-Young Lee, Woorim Kang, Hojun Sung, Na-Ri Shin, Min-Soo Kim, Tae W. Whon, Jin-Woo Bae
Frontiers in Microbiology.2018;[Epub] CrossRef - Phylogeny Trumps Chemotaxonomy: A Case Study Involving Turicella otitidis
Inwoo Baek, Mincheol Kim, Imchang Lee, Seong-In Na, Michael Goodfellow, Jongsik Chun
Frontiers in Microbiology.2018;[Epub] CrossRef - A Phylogenomic and Molecular Markers Based Analysis of the Class Acidimicrobiia
Danyu Hu, Guihong Cha, Beile Gao
Frontiers in Microbiology.2018;[Epub] CrossRef -
Roseivivax atlanticus (Li, Lai, Liu, Sun and Shao, 2015) is a later heterotypic synonym of Roseivivax marinus (Dai, Shi, Gao, Liu and Zhang, 2014)
Alexandra La Mura, David R. Arahal, María J. Pujalte
International Journal of Systematic and Evolutionary Microbiology.2018; 68(8): 2650. CrossRef
Review
- Minireview] Loop-mediated isothermal amplification (LAMP): principle, features, and future prospects
-
Tsugunori Notomi , Yasuyoshi Mori , Norihiro Tomita , Hidetoshi Kanda
-
J. Microbiol. 2015;53(1):1-5. Published online January 4, 2015
-
DOI: https://doi.org/10.1007/s12275-015-4656-9
-
-
78
View
-
0
Download
-
575
Crossref
-
Abstract
-
Loop-mediated isothermal amplification (LAMP), a newly developed gene amplification method, combines rapidity, simplicity, and high specificity. Several tests have been developed based on this method, and simplicity is maintained throughout all steps, from extraction of nucleic acids to detection of amplification. In the LAMP reaction, samples are amplified at a fixed temperature through a repetition of two types of elongation reactions occurring at the loop regions: self-elongation of templates from the stem loop structure formed at the 3'-terminal and the binding and elongation of new primers to the loop region. The LAMP reaction has a wide range of possible applications, including point-of-care testing, genetic testing in resource-poor settings (such as in developing countries), and rapid testing of food products and environmental samples.
-
Citations
Citations to this article as recorded by

- Enhancing the forensic sexual assault investigations with LAMP-based male DNA detection
Sunita Chunkul, Tikumphorn Sathirapatya, Piyawan Dangklao, Praphat Kawicha, Rachaneekorn Tammachote, Kornkiat Vongpaisarnsin
Forensic Science International: Synergy.2025; 10: 100567. CrossRef - Recent developments in isothermal amplification technology for rapid detection of SARS-CoV-2
Linlin Wang, Ruitong Tang, Wentao Wang, Lingguang Bu, Jingle Sun, Yurong Fu, Meng Li, Zhengjun Yi
Analytical Methods.2025;[Epub] CrossRef - Rapid detection of the invasive tomato leaf miner, Phthorimaea absoluta using simple template LAMP assay
Arindam Kumar, Damini Diksha, Susheel Kumar Sharma, P. R. Shashank, D. Nandhini, Soham Ray, Nitika Gupta, Mukesh Kumar Dhillon
Scientific Reports.2025;[Epub] CrossRef - Both aerosol and primer dimer breakdown for straightforward genotyping based on an integrated immunochromatographic biosensor
Xiaonan Liu, Jiaxing Zhang, Kai Hua, Yali Cui
Talanta.2025; 285: 127300. CrossRef - Innovative approaches to food traceability with DNA barcoding: Beyond traditional labels and certifications
Jacob Tizhe Liberty, Haijiao Lin, Christopher Kucha, Shangpeng Sun, Fatemah B. Alsalman
Ecological Genetics and Genomics.2025; 34: 100317. CrossRef - Cleavable energy transfer labeled oligonucleotide probe for enhanced isothermal amplification detection and nano digital chip-based readout
Li Liu, Stephen J. Dollery, Gregory J. Tobin, Guoyu Lu, Ke Du
Nanoscale.2025; 17(3): 1381. CrossRef - Branch canker battles: understanding and managing the Botryosphaeriaceae in avocado
Heike Möller, Bernard Slippers, Noëlani van den Berg
Phytoparasitica.2025;[Epub] CrossRef - Integrated overview on status, diagnosis and disease management of Acute Hepatopancreatic Necrosis Disease (AHPND) in shrimp aquaculture through metallic nanoparticles (MNPs) application – A review
Mohamad Sofi Abu Hassan, Nurul Ashikin Elias, Marina Hassan, Nurfarah Aini Mocktar, Noor Aniza Harun
Aquaculture.2025; 595: 741649. CrossRef - From crisis to innovation in point-of-care testing: Lessons from the COVID-19 pandemic and future directions
Xueting Lu, Jinpei Du, Minli You, Liben Chen, Feng Xu, Fenghao Chen
TrAC Trends in Analytical Chemistry.2025; 184: 118131. CrossRef - Application of Loop-Mediated Isothermal Amplification in Plant Pathogen Detection
Liuliu Yang, Yu Sun, Lin Sun, Zehao Wang, Jie Feng, Yue Liang
Phytopathology®.2025;[Epub] CrossRef - Development of colorimetric and fluorescent closed tube LAMP assay using simplified extraction for diagnosis of Meloidogyne enterolobii in root tissues
Arunee Suwanngam, Philipp H. Schiffer, Anongnuch Sasnarukkit, Suradej Siripattanapipong, Kansiree Jindapunnapat, Buncha Chinnasri, Toon Ruang-areerate
Scientific Reports.2025;[Epub] CrossRef - Development of a closed tube loop-mediated isothermal amplification (LAMP) assay to detect Hirschmanniella oryzae (Tylenchida: Pratylenchidae) in exported aquatic plants
Arunee Suwanngam, Philipp H. Schiffer, Anongnuch Sasnarukkit, Suradej Siripattanapipong, Kansiree Jindapunnapat, Toon Ruang-areerate, Buncha Chinnasri
Crop Protection.2025; 187: 106989. CrossRef - DNA-Based Technology for Herpesvirus Detection
Gloria Maini, Giorgia Cianci, Matteo Ferraresi, Valentina Gentili, Daria Bortolotti
DNA.2024; 4(4): 553. CrossRef - Point-of-Care Diagnostics Using Self-heating Elements from Smart Food Packaging: Moving Towards Instrument-Free Nucleic Acid-Based Detection
Mojdeh Hamidizadeh, Renata F. Martins, Frank F. Bier
Molecular Diagnosis & Therapy.2024;[Epub] CrossRef - Democratizing nucleic acid-based molecular diagnostic tests for infectious diseases at resource-limited settings – from point of care to extreme point of care
Suman Chakraborty
Sensors & Diagnostics.2024; 3(4): 536. CrossRef - Cross comparison of alternative diagnostic protocols including substitution to the clinical sample, RNA extraction method and nucleic acid amplification technology for COVID-19 diagnosis
Ismael Segura-Ulate, Navilla Apú, Bernal Cortés, Jordi Querol-Audi, Yamitzel Zaldívar, Carlos Alexander Ortega, Fernando Flores-Mora, Andrés Gatica-Arias, Germán Madrigal-Redondo
Frontiers in Molecular Biosciences.2024;[Epub] CrossRef - Application of extremophile cell factories in industrial biotechnology
Yuzhou Wang, Jinyi Qian, Tianqiong Shi, Yuetong Wang, Qiang Ding, Chao Ye
Enzyme and Microbial Technology.2024; 175: 110407. CrossRef - Comparison of dye-based and probe-based RT-LAMP in detection of canine astrovirus
Haixiao Shen, Dequan Yang, Xin Li, Houbin Ju, Feifei Ge, Xianchao Yang, Jian Wang, Luming Xia, Hongjin Zhao, Ping Jiang
Archives of Virology.2024;[Epub] CrossRef - Optimization of the molecular detection assay of Salmonella (MDS®) for drag swab samples of aviaries
MAIARA CRISTINE TITON, DIOGENES DEZEN, PAULO M.A. COSTA, DOUGLAS WILIAN RIZZOTTO, SIDIANE FATIMA CASTANHA, ALESSANDRA F. MILLEZI
Anais da Academia Brasileira de Ciências.2024;[Epub] CrossRef - AMPLON: Amplifying DNA with Multiarm Priming and Looping Optimization of Nucleic Acid
Mert Tunca Doganay, Ethan Roman, Andrea M. Hujer, Robert A. Bonomo, Steven G. Deeks, Daniel R. Kuritzkes, Mohamed S. Draz
Advanced Materials.2024;[Epub] CrossRef - Rapid on-site detection of Leuconostoc citreum in commercially processed products using loop-mediated isothermal amplification(LAMP) technique
Yoon-Soo Gwak, Hae-Yeong Kim, Mi-Ju Kim
Food Control.2024; 158: 110230. CrossRef - Ratoon Stunting Disease of Sugarcane: A Review Emphasizing Detection Strategies and Challenges
Moutoshi Chakraborty, Narshone Soda, Simon Strachan, Chuong N. Ngo, Shamsul A. Bhuiyan, Muhammad J. A. Shiddiky, Rebecca Ford
Phytopathology®.2024; 114(1): 7. CrossRef - Global resurgence of pertussis: A perspective from China
Ying Liu, Daojun Yu, Kaixuan Wang, Qing Ye
Journal of Infection.2024; 89(5): 106289. CrossRef - Sex differences in the growth of sea cucumber (Apostichopus japonicus)
Jingjing Cong, Lingnan Kong, Weihan Meng, Zengdong Wang, Zhihui Sun, Yaqing Chang
Aquaculture.2024; 582: 740475. CrossRef - Recent advances in exponential amplification reaction-enabled biosensors
Wentao Zhao, Fengli Su, Shulin Wang, Yujie Ma, Bingzhi Li, Xing Zhang
TrAC Trends in Analytical Chemistry.2024; 181: 118006. CrossRef - Rapid ABO genotyping method using loop-mediated isothermal amplification (LAMP) and real-time PCR
Hokwon Choi, Jiwoo Choi, Kyunghyeon Kwak, Yebin Kim, Eunbyeol Kim, Si-Keun Lim
International Journal of Legal Medicine.2024; 138(3): 751. CrossRef - A new simplified sequence-dependent loop-mediated isothermal amplification (LAMP) detection method
Yanju Chen, Yuanyuan Zhu, Jungang Du, Cheng Peng, Xiaofu Wang, Jian Wu, Qingli Zhou, Huan Chen, Junfeng Xu
Analytical and Bioanalytical Chemistry.2024; 416(18): 4143. CrossRef - Evaluation of molecular inhibitors of loop-mediated isothermal amplification (LAMP)
May Khat Nwe, Nisachon Jangpromma, Lapatrada Taemaitree
Scientific Reports.2024;[Epub] CrossRef - Development and validation of a new and rapid molecular diagnostic tool based on RT-LAMP for Hepatitis C virus detection at point-of-care
Sonia Arca-Lafuente, Cristina Yépez-Notario, Pablo Cea-Callejo, Violeta Lara-Aguilar, Celia Crespo-Bermejo, Luz Martín-Carbonero, Ignacio de los Santos, Verónica Briz, Ricardo Madrid
Methods.2024; 232: 43. CrossRef - Label-free Colorimetric Detection of Viral RNA Based on Clustered Regularly Interspaced Short Palindromic Repeats and Gold Nanoparticles with a Portable Device
Yaqin Zhang, Jianai Chen, Fange Kong, Chunxia Wang, Hangyu Guo, Yingchun Li, Jiahui Lu, Jicheng Zhang, Jiasi Wang, Yulin Zhou
Langmuir.2024; 40(22): 11534. CrossRef - Advancements in DNA analysis for distinguishing wild boar and domestic pig: a mini-review on research developments for food authentication studies
S D Volkandari, A Rohman, S N A Jenie, M Cahyadi, Y Erwanto
IOP Conference Series: Earth and Environmental Science.2024; 1377(1): 012025. CrossRef - Advancements in LAMP-Based Diagnostics: Emerging Techniques and Applications in Viral Detection with a Focus on Herpesviruses in Transplant Patient Management
Ana Cláudia Martins Braga Gomes Torres, Carolina Mathias, Suelen Cristina Soares Baal, Ana Flávia Kohler, Mylena Lemes Cunha, Lucas Blanes
International Journal of Molecular Sciences.2024; 25(21): 11506. CrossRef - Development and evaluation of a loop-mediated isothermal amplification (LAMP) method for Candida glabrata detection
H. Yahaya, Y. K. Cheah, H. Y. Chee, L. T. L. Than
European Journal of Clinical Microbiology & Infectious Diseases.2024; 43(11): 2211. CrossRef - Advancements in nanobiosensor technologies for in-vitro diagnostics to point of care testing
Chuntae Kim, Moon Sung Kang, Iruthayapandi Selestin Raja, Yoon Ki Joung, Dong-Wook Han
Heliyon.2024; 10(22): e40306. CrossRef - Detection of Clarithromycin Resistance in Helicobacter pylori Using MmaxSure™ H. pylori & ClaR Assay
Ilsoo Kim, Yu Ri Shin, Joon Sung Kim, Byung-Wook Kim, Lee-So Maeng, Jung Min Kim
Digestive Diseases.2024; 42(4): 292. CrossRef - Single-tube colorimetric loop-mediated isothermal amplification (LAMP) assay for high-sensitivity detection of SLCMV in cassava from southern India
R. Arutselvan, T. Makeshkumar
Microbial Pathogenesis.2024; 192: 106718. CrossRef - Food Authentication: The Detection of Arbutus unedo and Olea europaea Leaves as an Admixture of Oregano Using LAMP- and Duplex LAMP-Based Test Systems with Lateral-Flow Assays
Nathalie Holz, Nils Wax, Boris A. Illarionov, Margarita Iskhakova, Markus Fischer
Agriculture.2024; 14(4): 597. CrossRef - Development of a highly specific LAMP assay for detection of Sarcocystis tenella and Sarcocystis gigantea in sheep
Yajie Chen, Jing Peng, Zifu Zhu, Wen Zhang, Lifang Wang, Jianhai Xu, Qun Liu, Jing Liu
Parasitology Research.2024;[Epub] CrossRef - The Role of Biosensors in Detection of SARS-CoV-2: State-of-the-Art and
Future Prospects
Nimisha Roy, Abhipsha Khadanga, Amar Dhwaj, Amit Prabhakar, Deepti Verma
Current Nanoscience.2024; 20(5): 599. CrossRef - Recent advances of food safety detection by nucleic acid isothermal amplification integrated with CRISPR/Cas
Jiali Qiao, Zhiying Zhao, Yaru Li, Minghui Lu, Shuli Man, Shengying Ye, Qiang Zhang, Long Ma
Critical Reviews in Food Science and Nutrition.2024; 64(32): 12061. CrossRef - Genosensor on-chip paper for point of care detection: A review of biomedical analysis and food safety application
Lelya Hilda, Maysam Salih Mutlaq, Ibrahem Waleed, Raed H. Althomali, Mohammed H. Mahdi, Sherzod Shukhratovich Abdullaev, Rajesh Singh, Hind Ali Nasser, Yasser Fakri Mustafa, Ahmed H.R. Alawadi
Talanta.2024; 268: 125274. CrossRef - Self-Priming Cyclic Amplification Accelerating CRISPR Sensor for Sensitive and Specific MicroRNA Analysis with No Background
Dayong Li, Yanheng Yao, Wenting Cheng, Zhiqiang Hou, Zhongyun Wang, Yang Xiang
Analytical Chemistry.2024; 96(4): 1717. CrossRef - Combination of nucleic acid amplification and CRISPR/Cas technology in pathogen detection
Dandan Zeng, Jinlong Jiao, Tianlu Mo
Frontiers in Microbiology.2024;[Epub] CrossRef - A simplified molecular tool for detecting the Chagas etiological agent using a vector feces sample in field conditions
Luciana Larocca, Fabiana G. Stolowicz, Adrian A. Vojnov, Florencia Cano Suarez, Liliana Salvá, Sergio Meli, Ana Laura Carbajal-de-la-Fuente, Carolina Carrillo
Journal of Invertebrate Pathology.2024; 206: 108161. CrossRef - Comparison of the Diagnostic Performances of Five Different Tests in Diagnosing Visceral Leishmaniasis in an Endemic Region of Ethiopia
Dawit Gebreegziabiher Hagos, Yazezew Kebede Kiros, Mahmud Abdulkader, Henk D. F. H. Schallig, Dawit Wolday
Diagnostics.2024; 14(2): 163. CrossRef - An overview of fasciolosis in Nepal: epidemiology, diagnosis, and control strategies
Sameer Thakur
Journal of Parasitic Diseases.2024; 48(4): 723. CrossRef - Progress of exosomes in diagnosis of tuberculosis
Yuheng Liu, Yao Liao, Ji Wu, ZiFeng Zhu, DingHao Li, Lifu Wang
Decoding Infection and Transmission.2024; 2: 100020. CrossRef - A Novel High-Throughput Sample-in-Result-Out Device for the Rapid Detection of Viral Nucleic Acids
Fangning Wang, Fei Hu, Yunyun Zhang, Xichen Li, Qin Ma, Xincheng Wang, Niancai Peng
Biosensors.2024; 14(11): 549. CrossRef - Latest trends in biosensors powered by nucleic acid isothermal amplification for the diagnosis of joint infections: From sampling to identification towards the point-of-care
Mariarita De Felice, Mariarosaria De Falco, Amina Antonacci, Sara Colella, Vincenzo Vedi, Rachele Isticato, Alfonso Maria Romano, Valeria Nocerino, Bruno Miranda, Luca De Stefano, Viviana Scognamiglio
TrAC Trends in Analytical Chemistry.2024; 181: 118036. CrossRef - Probe-Based Loop-Mediated Isothermal Amplification Assay for Rapid Detection of Two Clarireedia spp., the Causal Agent of Dollar Spot of Turfgrass
Tammy Stackhouse, Anna Bass, Sumyya Waliullah, Emran Ali, Bochra A. Bahri, Alfredo D. Martinez-Espinoza
Plant Disease.2024; 108(10): 3115. CrossRef - A Foldable Thermoplastic Microdevice Integrating Isothermal Amplification and Schiff-Reaction-Based Colorimetric Assay for the Detection of Infectious Pathogens
Hee Mang Kim, Nae Yoon Lee
Chemosensors.2024; 12(5): 75. CrossRef - Paper-based loop-mediated isothermal amplification and CRISPR integrated platform for on-site nucleic acid testing of pathogens
Anindita Sen, Manaswini Masetty, Sasanka Weerakoon, Calum Morris, Jagjit S. Yadav, Senu Apewokin, Jennifer Trannguyen, Murray Broom, Aashish Priye
Biosensors and Bioelectronics.2024; 257: 116292. CrossRef - Commercial Opportunity or Addressing Unmet Needs—Loop-Mediated Isothermal Amplification (LAMP) as the Future of Rapid Diagnostic Testing?
Jelle J. Feddema, Kenneth D. S. Fernald, Bart J. F. Keijser, Jasper Kieboom, Linda H. M. van de Burgwal
Diagnostics.2024; 14(17): 1845. CrossRef - Advancements in visualizing loop-mediated isothermal amplification (LAMP) reactions: A comprehensive review of colorimetric and fluorometric detection strategies for precise diagnosis of infectious diseases
Arumugam Selva Sharma, Nae Yoon Lee
Coordination Chemistry Reviews.2024; 509: 215769. CrossRef - Molecular diagnosis of human toxoplasmosis: the state of the art
Eman Fathi Fadel, Hanaa Ahmed EL-Hady, Amal Mostafa Ahmed, Mohammed Essa Marghany Tolba
Journal of Parasitic Diseases.2024; 48(2): 201. CrossRef - An All-in-One Platform for On-Site Multiplex Foodborne Pathogen Detection Based on Channel-Digital Hybrid Microfluidics
Mei Xie, Tianlan Chen, Zongwei Cai, Bo Lei, Cheng Dong
Biosensors.2024; 14(1): 50. CrossRef - A microfluidic-based quantitative analysis system for the multiplexed genetic diagnosis of human viral infections using colorimetric loop-mediated isothermal amplification
Daigo Natsuhara, Akira Miyajima, Tomoya Bussho, Shunya Okamoto, Moeto Nagai, Masaru Ihira, Takayuki Shibata
The Analyst.2024; 149(12): 3335. CrossRef - Loop‐mediated isothermal amplification (LAMP) assays for Aedes and Culex species and evaluation of a simple DNA preparation method for field application
Tim Kamber, Alexander Mathis
Journal of Applied Entomology.2024; 148(7): 746. CrossRef - Rapid Visual Detection of Spiroplasma eriocheiris by Loop-Mediated Isothermal Amplification with Hydroxynaphthol Blue Dye
Shun Zhou, Zongrui Yang, Baoshan Guo, Jingyuan Yi, Yunfei Pang, Ruixin Feng, Jiaxue Song, Yunji Xiu
Marine Biotechnology.2024; 26(1): 116. CrossRef - Loop-mediated isothermal amplification (LAMP) for detection of atypical enterovirus D68 strain VR-1197
Ann-Kristin Tveten, Hanne Lillerovde Ørstenvik, Ingvill Tolaas
Journal of Virological Methods.2024; 330: 115030. CrossRef - UV-ozone treated glass fiber based lateral flow DNA extraction platform integrated with LAMP for rapid detection of pathogen bacteria in whole blood
Tugba Tezcan, Merve Calimci, Ismail Hakki Boyaci, Ugur Tamer
Microchemical Journal.2024; 206: 111487. CrossRef - Digital microfluidics with distance-based detection – a new approach for nucleic acid diagnostics
Man Ho, N. Sathishkumar, Alexandros A. Sklavounos, Jianxian Sun, Ivy Yang, Kevin P. Nichols, Aaron R. Wheeler
Lab on a Chip.2024; 24(1): 63. CrossRef - Molecular detection of sub-microscopic infections and Plasmodium falciparum histidine-rich protein-2 and 3 gene deletions in pre-elimination settings of South Africa
Olukunle O. Oyegoke, Olusegun P. Akoniyon, Leah Maharaj, Taiye S. Adewumi, Samson A. Malgwi, Samuel A. Aderoju, Abiodun J. Fatoba, Matthew A. Adeleke, Rajendra Maharaj, Moses Okpeku
Scientific Reports.2024;[Epub] CrossRef - REASSURED Test System for Food Control—Preparation of LAMP Reaction Mixtures for In-Field Identification of Plant and Animal Species
Nathalie Holz, Nils Wax, Marie Oest, Markus Fischer
Applied Sciences.2024; 14(23): 10946. CrossRef - Human Papillomavirus (HPV16 and HPV18) Infection; Pathogenesis, Vaccination, and Detection by Loop-Mediated Isothermal Amplification with Lateral Flow Dipstick Tests: A Review
Farzane Kargar, Mohammad Rahmati, Marzieh Jamalidoust, Mojtaba Mortazavi, Amir Savardashtaki, Morteza Milani, Amir Vahedi
Archives of Pediatric Infectious Diseases.2024;[Epub] CrossRef - A handheld HIV detection platform using paper-based sample preparation and real-time isothermal amplification
George Adedokun, Gurjit Sidhu, Morteza Alipanah, Gary P. Wang, Z. Hugh Fan
Microsystems & Nanoengineering.2024;[Epub] CrossRef - Vibration mixing for enhanced paper-based recombinase polymerase amplification
Kelli N. Shimazu, Andrew T. Bender, Per G. Reinhall, Jonathan D. Posner
Lab on a Chip.2024; 24(20): 4879. CrossRef - Application of LAMP coupled with NALF for precise detection of mycoplasma pneumoniae
Qi Yun, Si Fei Ma, Yue Cui, Hao Ying Ge, Qian Yun Zhang, Ning Zhang, Dong Ming Lu, Meng Gu
Biochemical and Biophysical Research Communications.2024; 717: 150028. CrossRef - Portable biosensor combining CRISPR/Cas12a and loop-mediated isothermal amplification for antibiotic resistance gene ermB in wastewater
Kang Mao, Hua Zhang, Fang Ran, Haorui Cao, Rida Feng, Wei Du, Xiqing Li, Zhugen Yang
Journal of Hazardous Materials.2024; 462: 132793. CrossRef - Loop-mediated isothermal amplification assays for the detection of antimicrobial resistance elements in Vibrio cholera
Daniel Antonio Negrón, Shipra Trivedi, Nicholas Tolli, David Ashford, Gabrielle Melton, Stephanie Guertin, Katharine Jennings, Bryan D. Necciai, Shanmuga Sozhamannan, Bradley W. Abramson
BMC Bioinformatics.2024;[Epub] CrossRef - Development of a loop-mediated isothermal amplification (LAMP) assay for rapid and visual detection of Anguillid herpesvirus 1
Qiang Chen, Li-Juan Zhang, Tie-Ying Song, Jun-Qing Ge
Journal of Virological Methods.2024; 330: 115014. CrossRef - Rapid and sensitive detection of Taura syndrome virus (TSV) in shrimp based on an isothermal enzymatic recombinase amplification (ERA) assay
Jiaobing Li, Jingjie Hu, Zhenmin Bao, Mengqiang Wang
Aquaculture International.2024; 32(5): 6211. CrossRef - Portable, and ultrasensitive HR-HPV tests based on nucleic acid biosensors
Chang Ma, Minhong Zou, Ning Xu, Yan Liu, Yuru Wang
Frontiers in Cellular and Infection Microbiology.2024;[Epub] CrossRef - Multiplex fluorescence loop-mediated isothermal amplification with lateral flow assay for rapid simultaneous detection of mecA and nuc genes in methicillin-resistant Staphylococcus aureus
Jeong-Eun Lee, Ji Yoon Chang, Won-Bo Shim
Analytica Chimica Acta.2024; 1319: 342984. CrossRef - LAMP Reaction in Plant Disease Surveillance: Applications, Challenges, and Future Perspectives
Chiara Aglietti, Alessandra Benigno, Santa Olga Cacciola, Salvatore Moricca
Life.2024; 14(12): 1549. CrossRef - Current Trends in RNA Virus Detection via Nucleic Acid Isothermal Amplification-Based Platforms
Le Thi Nhu Ngoc, Young-Chul Lee
Biosensors.2024; 14(2): 97. CrossRef - Application of Loop-Mediated Isothermal Amplification Assay Combined with Lateral Flow Dipstick (LAMP-LFD) for Specific and Sensitive Detection of Acidovorax citrulli (Schaad et al.) Causing Bacterial Fruit Blotch in Cucurbit Plants
Chengzhong Lan, Minsang Luo, Lin Gan, Meiling Hu, Hongchun Ruan, Yuli Dai, Xiaofei Liu, Xiujuan Yang
Agronomy.2024; 14(8): 1804. CrossRef - Recent advances and challenges in plant viral diagnostics
Aizada Kanapiya, Ulbike Amanbayeva, Zhanar Tulegenova, Altyngul Abash, Sayan Zhangazin, Kazbek Dyussembayev, Gulzhamal Mukiyanova
Frontiers in Plant Science.2024;[Epub] CrossRef - Comparison of the diagnostic accuracy of the Pluslife Mini Dock RHAM technology with Abbott ID Now and Cepheid GenXpert: A retrospective evaluation study
Laura Herrmann, Juliana Breuer, Tuan Ngo Duc, Nicole Thomé, Fatemeh Ghazaani, Sundrela Kamhieh-Milz, Julian Kamhieh-Milz, Andreas Pfützner
Scientific Reports.2024;[Epub] CrossRef - On-Site Bioaerosol Sampling and Airborne Microorganism Detection Technologies
Afagh Rastmanesh, Jayanta S. Boruah, Min-Seok Lee, Seungkyung Park
Biosensors.2024; 14(3): 122. CrossRef - Molecular detection and sequencing of beet necrotic yellow vein virus and beet cryptic virus 2 in sugar beet from Kazakhstan
Alexandr Pozharskiy, Aruzhan Mendybayeva, Ruslan Moisseyev, Marina Khusnitdinova, Gulnaz Nizamdinova, Dilyara Gritsenko
Frontiers in Microbiology.2024;[Epub] CrossRef - A simple joint detection platform for high-throughput single-cell heterogeneity screening
Yi Qiao, Qiongdan Zhang, Yukun He, Tianguang Cheng, Jing Tu
Talanta.2024; 269: 125460. CrossRef - Sensitive and specific CRISPR-Cas12a assisted nanopore with RPA for Monkeypox detection
Md. Ahasan Ahamed, Muhammad Asad Ullah Khalid, Ming Dong, Anthony J. Politza, Zhikun Zhang, Aneesh Kshirsagar, Tianyi Liu, Weihua Guan
Biosensors and Bioelectronics.2024; 246: 115866. CrossRef - Development of a rapid detection method for molecular beacons LAMP for Vibrio parahaemolyticus in food safety
Jiayin Lv, Yuhong Guan
Materials Express.2024; 14(4): 551. CrossRef - GMOIT: a tool for effective screening of genetically modified crops
Pu Zhou, Xuan Liu, Jingang Liang, Juanli Zhao, Yuqi Zhang, Dongmei Xu, Xiaying Li, Ziyan Chen, Zongyong Shi, Jianhua Gao
BMC Plant Biology.2024;[Epub] CrossRef - LAMP Assay to Detect Elsinoë necatrix, an Important Eucalyptus Shoot and Leaf Pathogen
Alishia van Heerden, Nam Q. Pham, Brenda D. Wingfield, Michael J. Wingfield, Jupiter I. Muro Abad, Alvaro Durán, P. Markus Wilken
Plant Disease.2024; 108(9): 2731. CrossRef - Rapid and specific detection of mackerels of the genus Scomber using loop-mediated isothermal amplification (LAMP)
Wei Cui, Hiroki Koyama, Kouichi Kurose
Fisheries Science.2024; 90(6): 1025. CrossRef - Chemical Heating for Minimally Instrumented Point-of-Care (POC) Molecular Diagnostics
Michael G. Mauk, Felix Ansah, Mohamed El-Tholoth
Biosensors.2024; 14(11): 554. CrossRef - Development of a Rapid Detection Method to Prorocentrum lima by Loop-Mediated Isothermal Amplification with Hydroxy Naphthol Blue
Chao Yang, Yu Zhen, Jialin Hou, Tiezhu Mi
Marine Biotechnology.2024; 26(3): 475. CrossRef - Development of a multiplex one-tube loop-mediated isothermal amplification method for rapidly simultaneous detection of the mecA and nuc genes in methicillin-resistant Staphylococcus aureus
Jeong-Eun Lee, Sol-A Kim, Hyoyoung Mun, Kwang-Soo Ha, Won-Bo Shim
Microchemical Journal.2024; 201: 110712. CrossRef - The Present and Future Landscapes of Molecular Diagnostics
Justin C. Rolando, Arek V. Melkonian, David R. Walt
Annual Review of Analytical Chemistry
.2024; 17(1): 459. CrossRef - Characterization, Molecular Mechanism of Prochloraz-Resistance in Fusarium fujikuroi and Development of Loop-Mediated Isothermal Amplification Rapid Detection Technique Based on the S312T Genotype of Resistances
Chenyang Ge, Daixing Dong, Chengxing Mao, Qianqian Zhang, Chuanqing Zhang
Journal of Fungi.2024; 10(8): 560. CrossRef - Culicoides Species of the Rain Forest Belt of the Littoral Region of Cameroon: Their Incrimination in the Transmission of Mansonella perstans
Rene Ebai, Chi Anizette Kien, Fanny Fri Fombad, Frederick Esofi, Emmanuel Ouam, Anna Ning Ntuh, Glory Ngongeh Amambo, Victor Narcisse Tchamatchoua Gandjui, Valerine Chawa Chunda, Franck Nietcho, Lucy Cho Nchang, Chefor Magha, Jerome Fru Cho, Mathias Eyong
Pathogens.2024; 13(2): 146. CrossRef - Navigating towards dry root rot resistance in mungbean: impacts, mechanisms, and management strategies
Nithyananth Hemanth Sadhana, Subramaniam Geethanjali, Rishabh Mirchandani, Senthil Natesan, Muthappa Senthil-Kumar
Plant Physiology Reports.2024; 29(3): 439. CrossRef - A sequential liquid dispensing method in a centrifugal microfluidic device operating at a constant rotational speed for the multiplexed genetic detection of foodborne pathogens
Daigo Natsuhara, Yuka Kiba, Ryogo Saito, Shunya Okamoto, Moeto Nagai, Yusuke Yamauchi, Masashi Kitamura, Takayuki Shibata
RSC Advances.2024; 14(31): 22606. CrossRef - Enhanced pyrophosphate detection: Utilizing oPD-derived carbon dots and Fe3+ interactions in a paper strip biosensor
Rishabh Garg, Dinesh Prasad
Biochemical and Biophysical Research Communications.2024; 739: 150577. CrossRef - Molecular Detection of Respiratory Tract Viruses in Chickens at the Point of Need by Loop-Mediated Isothermal Amplification (LAMP)
Mohamed El-Tholoth, Haim H. Bau
Viruses.2024; 16(8): 1248. CrossRef - Development of the Visual Loop-Mediated Isothermal Amplification Combined with Lateral Flow Dipstick (LAMP-LFD) Method for Rapid Detection of Vibrio harveyi in Aquatic Animals
S. H. Cai, Z. Chen, L. J. Sun, J. Zhong, Y. C. Huang, S. P. Yang, Y. S. Lu
Applied Biochemistry and Microbiology.2024; 60(4): 749. CrossRef - An Optimized CRISPR/Cas12a Assay to Facilitate the BRAF V600E Mutation Detection
Azadeh Etemadzadeh, Pouya Salehipour, Fatemeh Movahedi Motlagh, Masoomeh Khalifeh, Adnan Asadbeigi, Mina Tabrizi, Reza Shirkouhi, Mohammad Hossein Modarressi
Journal of Clinical Laboratory Analysis.2024;[Epub] CrossRef - Comparison and Optimization of Simple DNA Extraction Methods for LAMP-Based Point-of-Care Applications Employing Submillimeter Skin Biopsies
Juan M. Boza, Jason Cade Manning, David C. Erickson
ACS Omega.2024; 9(37): 38855. CrossRef - Rapid, on-site and yes-or-no detection of Salmonella typhimurium in foods using Argonaute-enabled assay
Jiali Qiao, Jingyu Jia, Weipan Peng, Minghui Lu, Yaru Li, Shuli Man, Shengying Ye, Long Ma
Sensors and Actuators B: Chemical.2024; 404: 135263. CrossRef - Pathogenicity and virulence of African swine fever virus
Ines Ruedas-Torres, Bui Thi to Nga, Francisco J. Salguero
Virulence.2024;[Epub] CrossRef - D-Glucose-Mediated Gold Nanoparticle Fabrication for Colorimetric Detection of Foodborne Pathogens
Seo Yeon Park, Rajamanickam Sivakumar, Nae Yoon Lee
Biosensors.2024; 14(6): 284. CrossRef - Next‐generation methods for early disease detection in crops
Daniela Trippa, Riccardo Scalenghe, Marcos Fernando Basso, Stefano Panno, Salvatore Davino, Chiara Morone, Antonio Giovino, Safa Oufensou, Nicola Luchi, Sanaz Yousefi, Federico Martinelli
Pest Management Science.2024; 80(2): 245. CrossRef - Circulating tumor RNA and exosomes as disease prognosis and therapy effectivity novel markers in case of malignant gliomas in adults
Elizaveta V. Ermolaeva, Sofia S. Sklyar, Nikolai V. Tsygan, Bobir I. Safarov, Victoria S. Kushnirova, Olesya I. Timaeva, Andrei G. Vasiliev, Alexandr P. Trashkov, Anna V. Vasilieva
Pediatrician (St. Petersburg).2024; 14(5): 71. CrossRef - Reverse transcriptase loop-mediated isothermal amplification assisted with localized surface plasmon resonance of gold nanorods for viability assessment of Lactobacillus acidophilus in yogurt
Zahra Valipanah, Pooria Gill, Abolghasem Rahmani, Adele Rafati
International Dairy Journal.2024; 158: 106034. CrossRef - Gravity-driven and rotation-controlled microfluidic chip for point-of-care nucleic acid detection in the fully closed environment
Yanju Chen, Yuanyuan Zhu, Xiaofu Wang, Cheng Peng, Rui Wang, Tingzhang Wang, Yang Che, Jian Wu, Junfeng Xu
Talanta.2024; 267: 125258. CrossRef - Research progress of severe acute respiratory syndrome coronavirus 2 on aerosol collection and detection
Xinyu Zhang, Yuting Chen, Yueying Pan, Xinye Ma, Gui Hu, Song Li, Yan Deng, Zhu Chen, Hui Chen, Yanqi Wu, Zhihong Jiang, Zhiyang Li
Chinese Chemical Letters.2024; 35(1): 108378. CrossRef - Comprehensive evaluation on progressive development strategies in DENV surveillance and monitoring infection rate among vector population
Bidisha Das, Sibnarayan Datta, Vanlalhmuaka, Pichili Vijaya Bhaskar Reddy
Journal of Vector Borne Diseases.2024; 61(3): 327. CrossRef - The development of a loop-mediated isothermal amplification (LAMP) assay to detect American foulbrood in managed honey bee populations
Danielle Ackerly, Lily Tran, Travis Beddoe
Apidologie.2024;[Epub] CrossRef - The Development of a Multienzyme Isothermal Rapid Amplification Assay to Visually Detect Duck Hepatitis B Virus
Shuqi Xu, Yuanzhuo Man, Xin Xu, Jun Ji, Yan Wang, Lunguang Yao, Qingmei Xie, Yingzuo Bi
Veterinary Sciences.2024; 11(5): 191. CrossRef - Diagnosis of extraintestinal pathogenic Escherichia coli pathogenesis in urinary tract infection
Deenadayalan Karaiyagowder Govindarajan, Biniam Moges Eskeziyaw, Kumaravel Kandaswamy, Degisew Yinur Mengistu
Current Research in Microbial Sciences.2024; 7: 100296. CrossRef - Establishment and evaluation of a new fluorescent probe method based on loop‐mediated isothermal amplification for the detection of Mycobacterium tuberculosis complex
Mireguli Batuer, Yue Yuan, Mengsi Yu, Cunren Meng
Luminescence.2024;[Epub] CrossRef - Efficacy evaluation of novel test based on isothermal amplification for the detection of tuberculosis pathogen DNA in vitro
Yu.L. Mikulovich, A.I. Zaitseva, S.V. Lazebny, M.A. Plekhanova, S.V. Smerdin, G.A. Shipulin
Laboratory Service.2024; 13(4): 36. CrossRef - Development of RT-qPCR and loop-mediated isothermal amplification (LAMP) assays for the rapid detection of Rahnella aquatilis in fish
Meijuan Shi, Yanyan Cao, Xiucai Hu, Fuli Luo, Aijun Lv
Aquaculture.2024; 578: 740117. CrossRef - Effects of storage temperature on throat swabs preserved in different transport media for detection of SARS-CoV-2 by reverse transcriptase polymerase chain reaction
Lalita Verma, Saroj Hooja, Rajeev Yadav, Nita Pal, Kaamini Ranawat, Bharti Malhotra
Journal of Laboratory Physicians.2024; 0: 1. CrossRef - Development of loop-mediated isothermal amplification technique for LM canola T45, 73496, and MON88302 and its field application
Wonkyun Choi, A-Mi Yoon, Hye Song Lim, Jung Ro Lee
Plant Biotechnology Reports.2023; 17(6): 947. CrossRef - Rapid Discrimination of Panax quinquefolium and Panax ginseng Using the Proofman-Duplex-LMTIA Technique
Xiaodong Zhang, Zongding Li, Yaoxuan Zhang, Dandan Xu, Liang Zhang, Fugang Xiao, Deguo Wang
Molecules.2023; 28(19): 6872. CrossRef - Nucleic acid amplification with specific signal filtration and magnification for ultrasensitive colorimetric detection
Hongfei He, Yan Zhou, Bin Chen, Yi Zhang, Xiaowu Zhong, Lei Xu, Bin Guo, Chong Yin, Xi Zhou, Qingrong Li, Zhen Huang, Guangcheng Luo, Xiaolan Guo
Talanta.2023; 253: 123978. CrossRef - Various Techniques for Molecular and Rapid Detection of Infectious and
Epidemic Diseases
Mohamad Hesam Shahrajabian, Wenli Sun
Letters in Organic Chemistry.2023; 20(9): 779. CrossRef - Recombinase polymerase amplification in combination with electrochemical readout for sensitive and specific detection of PIK3CA point mutations
Vanessa Thoeny, Eva Melnik, Melanie Huetter, Malahat Asadi, Pooyan Mehrabi, Thomas Schalkhammer, Walter Pulverer, Thomas Maier, Giorgio C. Mutinati, Peter Lieberzeit, Rainer Hainberger
Analytica Chimica Acta.2023; 1281: 341922. CrossRef - Plasmonic Nanostructure Biosensors: A Review
Huimin Wang, Tao Wang, Xuyang Yuan, Yuandong Wang, Xinzhao Yue, Lu Wang, Jinyan Zhang, Jian Wang
Sensors.2023; 23(19): 8156. CrossRef - First field study using Strong-LAMP for diagnosis of strongyloidiasis in Cubal, Angola
Beatriz Crego-Vicente, Begoña Febrer-Sendra, Arlette Nindia, Agostinho Pessela, Sandra Aixut, Joan Martínez-Campreciós, Alejandro Mediavilla, Aroa Silgado, Elena Sulleiro, Begoña Treviño, Israel Molina, Antonio Muro, Fernando Salvador, Pedro Fernández-Sot
Parasites & Vectors.2023;[Epub] CrossRef - Point‐of‐Care Diagnostic Platforms for Loop‐Mediated Isothermal Amplification
Nazente Atceken, Muhammad Munzer Alseed, Sajjad Rahmani Dabbagh, Ali K. Yetisen, Savas Tasoglu
Advanced Engineering Materials.2023;[Epub] CrossRef - Identification of Fish Species and Targeted Genetic Modifications Based on DNA Analysis: State of the Art
Eliska Cermakova, Simona Lencova, Subham Mukherjee, Petra Horka, Simon Vobruba, Katerina Demnerova, Kamila Zdenkova
Foods.2023; 12(1): 228. CrossRef - An isothermal enzymatic recombinase amplification (ERA) assay for rapid and accurate detection of Enterocytozoon hepatopenaei infection in shrimp
Jiaobing Li, Yan Wang, Jingjie Hu, Zhenmin Bao, Mengqiang Wang
Journal of Invertebrate Pathology.2023; 197: 107895. CrossRef - First definitive host record of Liopteridae revealed by biological observations and molecular biological assays: Paramblynotus koreanus (Hymenoptera: Liopteridae) is a parasitoid of Carcilia strigicollis (Coleoptera: Curculionidae)
Hiroshi Kodama, Tatsuya Ide
Applied Entomology and Zoology.2023; 58(4): 387. CrossRef - Enzyme-free and sensitive method for single-stranded nucleic acid detection based on CHA and HCR
Xiaolong Chen, Chaowang Huang, Fuping Nie, Mingdong Hu
Analytical Methods.2023; 15(34): 4243. CrossRef - Novel DNA nanoflower biosensing technologies towards next-generation molecular diagnostics
Jing Sheng, Yan Pi, Shuang Zhao, Binpan Wang, Ming Chen, Kai Chang
Trends in Biotechnology.2023; 41(5): 653. CrossRef - A Hypothetical Approach to Concentrate Microorganisms from Human Urine Samples Using Paper-Based Adsorbents for Point-of-Care Molecular Assays
Isha Uttam, Sujesh Sudarsan, Rohitraj Ray, Raja Chinnappan, Ahmed Yaqinuddin, Khaled Al-Kattan, Naresh Kumar Mani
Life.2023; 14(1): 38. CrossRef - Overview of African Horse Sickness Virus Detection Technology
晓娜 赵
Hans Journal of Agricultural Sciences.2023; 13(10): 910. CrossRef - Advances in molecular infectious diseases testing in the time of COVID-19
David R. Peaper, Christopher A. Kerantzas, Thomas J.S. Durant
Clinical Biochemistry.2023; 117: 94. CrossRef - Development of environmental loop-mediated isothermal amplification (eLAMP) diagnostic tool for Bulinus truncatus field detection
Manon Blin, Bruno Senghor, Jérôme Boissier, Stephen Mulero, Olivier Rey, Julien Portela
Parasites & Vectors.2023;[Epub] CrossRef - Recent Uses of Paper Microfluidics in Isothermal Nucleic Acid Amplification Tests
Jocelyn Reynolds, Reid S. Loeffler, Preston J. Leigh, Hannah A. Lopez, Jeong-Yeol Yoon
Biosensors.2023; 13(9): 885. CrossRef - Developing Loop Mediated Isothermal Amplification (LAMP) assays for rapid, presumptive DNA detection of an invasive reptile (Boa constrictor)
Nathan Deliveyne, Jeremy J. Austin, Phillip Cassey, Adam Stow
Wildlife Research.2023;[Epub] CrossRef - Shining a LAMP on the applications of isothermal amplification for monitoring environmental biosecurity
Nathan Deliveyne, Jennifer M. Young, Jeremy J. Austin, Phillip Cassey
NeoBiota.2023; 82: 119. CrossRef - Development of loop-mediated isothermal amplification (LAMP) assays using five primers reduces the false-positive rate in COVID-19 diagnosis
Galyah Alhamid, Huseyin Tombuloglu, Ebtesam Al-Suhaimi
Scientific Reports.2023;[Epub] CrossRef - Isothermal nucleic acid amplification and its uses in modern diagnostic technologies
Pulkit Srivastava, Dinesh Prasad
3 Biotech.2023;[Epub] CrossRef - Validation of quantitative loop-mediated isothermal amplification assay using a fluorescent distance-based paper device for detection of Escherichia coli in urine
Natkrittaya Saengsawang, Panthita Ruang-areerate, Nuanlaong Kaeothaisong, Saovanee Leelayoova, Mathirut Mungthin, Piraporn Juntanawiwat, Patomroek Hanyanunt, Patsanun Potisuwan, Piyanate Kesakomol, Pornphan Butsararattanagomen, Pattarawadee Wichaiwong, Wi
Scientific Reports.2023;[Epub] CrossRef - Paper-Based Loop Mediated Isothermal Amplification (LAMP) Platforms: Integrating the Versatility of Paper Microfluidics with Accuracy of Nucleic Acid Amplification Tests
Debayan Das, Manaswini Masetty, Aashish Priye
Chemosensors.2023; 11(3): 163. CrossRef - Gold Nanoparticle-Based Plasmonic Biosensors
Enrico Ferrari
Biosensors.2023; 13(3): 411. CrossRef - Changing the diagnostic paradigm for sugarcane: development of a mill-based diagnostic for ratoon stunting disease in crude cane juice
Sriti Burman, Michael G. Mason, Jessica Hintzsche, Yiping Zou, Lucy Gibbs, Laura MacGillycuddy, Robert C. Magarey, José R. Botella
Frontiers in Plant Science.2023;[Epub] CrossRef - Rapid extraction-free detection of the R132H isocitrate dehydrogenase mutation in glioma using colorimetric peptide nucleic acid-loop mediated isothermal amplification (CPNA-LAMP)
Kristian A. Choate, Edward J. Raack, Veronica F. Line, Matthew J. Jennings, Robert J. Belton, Robert J. Winn, Paul B. Mann, Avaniyapuram Kannan Murugan
PLOS ONE.2023; 18(9): e0291666. CrossRef - Evaluation of kit-based loop-mediated isothermal amplification (TB-LAMP) assay in the diagnosis of tubercular lymphadenitis
Saurav Das, Neeraj Nischal, Binit Kumar Singh, Animesh Ray, Pankaj Jorwal, Manish Soneja, Maroof Ahmad Khan, Kapil Sikka, Sanjeev Sinha, Naveet Wig
Access Microbiology
.2023;[Epub] CrossRef - Detection by Sensitive Real-Time Reverse Transcription Loop-Mediated Isothermal Amplification of Olive Leaf Yellowing Associated Virus and Its Incidence in Italy and Spain
Andrea Giovanni Caruso, Sofia Bertacca, Arianna Ragona, Graziella Agrò, Maria Isabel Font-San-Ambrosio, Ana Alfaro-Fernández, Rocío Estévez Sánchez, Stefano Panno, Salvatore Davino
Horticulturae.2023; 9(6): 702. CrossRef - Photoinduced electron transfer detection method for identifying UGT1A1*28 microsatellites
Shirou Tsuchida, Noriaki Himi, Yuuki Miura, Suzune Kodama, Tsugumi Shindo, Koji Nakagawa, Takashi Aoki, Stephen D. Ginsberg
PLOS ONE.2023; 18(8): e0289506. CrossRef - Establishment of the Recombinase Polymerase Amplification–Lateral Flow Dipstick Detection Technique for Fusarium oxysporum
Shuodan Hu, Chenyi Yan, Hong Yu, Yu Zhang, Chuan-Qing Zhang
Plant Disease.2023; 107(9): 2665. CrossRef - Development of a Novel Phagomagnetic-Assisted Isothermal DNA Amplification System for Endpoint Electrochemical Detection of Listeria monocytogenes
Cláudia Maciel, Nádia F. D. Silva, Paula Teixeira, Júlia M. C. S. Magalhães
Biosensors.2023; 13(4): 464. CrossRef - Advancements in the Worldwide Detection of Severe Fever with Thrombocytopenia Syndrome Virus Infection from 2009 to 2023
Lin Ai, Wei Wang, Zheng Teng
China CDC Weekly.2023; 5(31): 687. CrossRef - A hairpin probe-mediated exponential amplification reaction for highly sensitive and specific detection of microRNAs
Hongyan Yu, Zhi Weng, Xi Zhou, Dan Bai, Wang Luo, Xiaole Han, Lin Song, Qian Liu, Junjie Li, Yujun Yang, Yongcan Guo, Ke Lv, Guoming Xie
Chemical Communications.2023; 59(28): 4158. CrossRef - Rapid and Visual Determination of Cronobacter sakazakii in Powdered Infant Formula Using Competitive Annealing Mediated Isothermal Amplification (CAMP)
Xu Chen, Wei Li, Yue Ma
Analytical Letters.2023; 56(14): 2262. CrossRef - Machine learning at the edge for AI-enabled multiplexed pathogen detection
Vahid Ganjalizadeh, Gopikrishnan G. Meena, Matthew A. Stott, Aaron R. Hawkins, Holger Schmidt
Scientific Reports.2023;[Epub] CrossRef - DNA compaction enhances the sensitivity of fluorescence-based nucleic acid assays: a game changer in point of care sensors?
Sujesh Sudarsan, Anusha Prabhu, Dinesh Prasad, Naresh Kumar Mani
The Analyst.2023; 148(10): 2295. CrossRef - Loop-mediated isothermal amplification (LAMP)/Cas12a assay for detection of Ralstonia solanacearum in tomato
Zhiyu Fan, Yuxia Mei, Jiawei Xing, Tian Chen, Di Hu, Hui Liu, Yingjun Li, Derui Liu, Zufeng Liu, Yunxiang Liang
Frontiers in Bioengineering and Biotechnology.2023;[Epub] CrossRef - Advances in point-of-care genetic testing for personalized medicine applications
A. S. de Olazarra, S. X. Wang
Biomicrofluidics.2023;[Epub] CrossRef - Multi-throughput POCT Technology Based on RPA and CRISPR/Cas12a and Its Application in Detection of Adulterated Meat
Wei Ding, Tanfen Fang, Yan Liu, Ling Zhang, Bo Wang, Wanping Sun
ACS Food Science & Technology.2023; 3(3): 514. CrossRef - Strategy of functional nucleic acids-mediated isothermal amplification for detection of foodborne microbial contaminants: A review
Jie Zhou, Teng-Yu Wang, Zhi Lan, Han-Jie Yang, Xing-Jian Ye, Rui Min, Zhao-Hui Wang, Qing Huang, Jing Cao, Yu-E Gao, Wen-Long Wang, Xiu-Lan Sun, Yi Zhang
Food Research International.2023; 173: 113286. CrossRef - Reverse Transcriptase Enzyme-assisted recombinant isothermal amplification with CRISPR/Cpf1 for RNA virus assay
Yifan Xiong, Gaihua Cao, Fuping Nie, Meimei Shi, Jun Yang, Yingguo Li, Danqun Huo, Changjun Hou
Process Biochemistry.2023; 130: 358. CrossRef - Mayaro virus detection by integrating sample preparation with isothermal amplification in portable devices
Morteza Alipanah, Carlos Manzanas, Xin Hai, John A. Lednicky, Alberto Paniz-Mondolfi, J. Glenn Morris, Z. Hugh Fan
Analytical and Bioanalytical Chemistry.2023; 415(23): 5605. CrossRef - Rapid and accurate detection of SARS-CoV-2 using the RHAM technology
Zhuo Xiao, Xiaoli Liu, Xiaolong Kang, Yaoheng Feng, Lijun Zheng, Chong Chen
Scientific Reports.2023;[Epub] CrossRef - Current and Future Advances in the Detection and Surveillance of Biosecurity-Relevant Equine Bacterial Diseases Using Loop-Mediated Isothermal Amplification (LAMP)
Alexandra Knox, Gemma Zerna, Travis Beddoe
Animals.2023; 13(16): 2663. CrossRef - Loop-Mediated Isothermal Amplification of DNA (LAMP) as an Alternative Method for Determining Bacteria in Wound Infections
Monika Gieroń, Paulina Żarnowiec, Katarzyna Zegadło, Dawid Gmiter, Grzegorz Czerwonka, Wiesław Kaca, Beata Kręcisz
International Journal of Molecular Sciences.2023; 25(1): 411. CrossRef - Rapid SARS-CoV-2 RT-LAMP Assay Setup using Gene Construct Design Approach
Mohsen Vaez, Nazanin Kazemimejad, Jalil Fallah Mehrabadi
Iranian Journal of Medical Microbiology.2023; 17(3): 329. CrossRef - A flash signal amplification approach for ultrasensitive and rapid detection of single nucleotide polymorphisms in tuberculosis
Wei-Ting Chen, Ping-Yeh Chiu, Chien-Fu Chen
Biosensors and Bioelectronics.2023; 237: 115514. CrossRef - Advances and Challenges in Cytomegalovirus Detection Methods for Liver Transplant Donors
Xiaoping Li, Yiwu Zhong, Yinbiao Qiao, Haoyu Li, Xu Hu, Saber Imani, Shusen Zheng, Jianhui Li
Diagnostics.2023; 13(21): 3310. CrossRef - Hybrid Digital-Droplet Microfluidic Chip for Applications in Droplet Digital Nucleic Acid Amplification: Design, Fabrication and Characterization
Beatriz Coelho, Joana Neto, Bárbara Sieira, André Moura, Elvira Fortunato, Rodrigo Martins, Pedro Baptista, Rui Igreja, Hugo Águas
Sensors.2023; 23(10): 4927. CrossRef - Solid-State Nanopore Sensors with Enhanced Sensitivity through Nucleic Acid Amplification
Xiaojin Zhang, Huimin Dou, Xiaorui Chen, Meihua Lin, Yu Dai, Fan Xia
Analytical Chemistry.2023; 95(47): 17153. CrossRef - Isothermal nucleic acid amplification technology for rapid detection of virus
Zhenting Wei, Xiaowen Wang, Huhu Feng, Fanpu Ji, Dan Bai, Xiaoping Dong, Wei Huang
Critical Reviews in Biotechnology.2023; 43(3): 415. CrossRef - Rapid, multiplex detection of SARS-CoV-2 using isothermal amplification coupled with CRISPR-Cas12a
Diogo Figueiredo, António Cascalheira, Joao Goncalves
Scientific Reports.2023;[Epub] CrossRef - Primer design and optimization of loop-mediated isothermal amplification (LAMP) for specific detection of genes isoniazid-resistant Mycobacterium tuberculosis
O N Aulia, D H Putri, L Chaidir, M Yusuf, K Kurniawan, I Faizal
IOP Conference Series: Earth and Environmental Science.2023; 1271(1): 012082. CrossRef - Identification of the novel potential pathogen Trueperella pecoris with interspecies significance by LAMP diagnostics
Antonia Kreitlow, Siti Gusti Ningrum, Christoph Lämmler, Marcel Erhard, Christiane Hoffmann, Madeleine Plötz, Amir Abdulmawjood
Scientific Reports.2023;[Epub] CrossRef - Pitaya Virus X Coat Protein Acts as an RNA Silencing Suppressor and Can Be Used as a Specific Target for Detection Using RT-LAMP
Yue Zhao, Shutong Yang, Ling Jiang, Qian Yang, Liting Luo, Junmei Jiang, Srihunsa Malichan, Jin Zhao, Xin Xie
Plant Disease.2023;[Epub] CrossRef - Advanced Strategies for Developing Vaccines and Diagnostic Tools for African Swine Fever
Jong-Woo Lim, Thi Thu Hang Vu, Van Phan Le, Minjoo Yeom, Daesub Song, Dae Gwin Jeong, Song-Kyu Park
Viruses.2023; 15(11): 2169. CrossRef - Portable and Battery-Operated Isothermal Amplification Device Validation for Onsite Analysis of M. tuberculosis “DNA Hunter”
H. Esra Agel
Indonesian Journal of Tropical and Infectious Disease.2023; 11(1): 1. CrossRef - A LAMP Assay for Rapid Detection of the Pitch Canker Pathogen Fusarium circinatum
Colton D. Meinecke, Lieschen De Vos, Neriman Yilmaz, Emma T. Steenkamp, Michael J. Wingfield, Brenda D. Wingfield, Caterina Villari
Plant Disease.2023; 107(10): 2916. CrossRef - A Miniaturized System for Rapid, Isothermal Detection of SARS-CoV-2 in Human and Environmental Samples
Jake Staples, Athanasia-Maria Dourou, Irene Liampa, Calvin Sjaarda, Emily Moslinger, Henry Wong, Prameet M. Sheth, Stilianos Arhondakis, Ravi Prakash
Biomedicines.2023; 11(7): 2038. CrossRef - Fano resonance-induced high-purity circularly polarized spectra for high-precision refractive index sensing from hybrid resonator-graphene meta-surfaces
Yazheng Hao, Rui Yang
Optics Express.2023; 31(2): 3059. CrossRef - Monitoring Spore Dispersal and Early Infections of Diplocarpon coronariae Causing Apple Blotch Using Spore Traps and a New qPCR Method
Clémence Boutry, Anne Bohr, Sascha Buchleither, Mathias Ludwig, Thomas Oberhänsli, Lucius Tamm, Hans-Jakob Schärer, Pascale Flury
Phytopathology®.2023; 113(3): 470. CrossRef - Development of Colloidal Gold Immunochromatography and Reverse-Transcription Loop-Mediated Isothermal Amplification Assays to Detect Lychnis Mottle Virus
Weijie Jin, Yubao Zhang, Xuesi Su, Ruoyu Wang, Zhongkui Xie, Yajun Wang, Yang Qiu
Plant Disease.2023; 107(5): 1584. CrossRef - Rapid and sensitive on-site detection of SARS-CoV-2 RNA from environmental surfaces using portable laboratory devices
Kouichi Kitamura, Minami Kikuchi Ueno, Hiromu Yoshida, Rebekah M. Martin
Microbiology Spectrum.2023;[Epub] CrossRef - Rapid detection of apple latent spherical virus infecting Angelica sinensis by gold immunochromatography reverse transcription loop-mediated isothermal amplification assay
Weijie Jin, Yubao Zhang, Xuesi Su, Ruoyu Wang, Zhongkui Xie, Yajun Wang, Yang Qiu, Xia Zhao
Crop Protection.2023; 169: 106254. CrossRef - Taxonomy and Biological Control: New Challenges in an Old Relationship
Eduardo Mitio Shimbori, Ranyse Barbosa Querino, Valmir Antonio Costa, Roberto Antonio Zucchi
Neotropical Entomology.2023; 52(3): 351. CrossRef - A novel assay based on DNA melting temperature for multiplexed identification of SARS-CoV-2 and influenza A/B viruses
Peng Gao, Yanyan Fan, Xiaomu Kong, Rui Zhang, Lida Chen, Yongwei Jiang, Yi Liu, Meimei Zhao, Guoxiong Deng, Yongtong Cao, Liang Ma
Frontiers in Microbiology.2023;[Epub] CrossRef - Rapid and sensitive LAMP/CRISPR-powered diagnostics to detect different hepatitis C virus genotypes using an ITO-based EG-FET biosensing platform
Hsin-Ying Ho, Wei-Sin Kao, Piyush Deval, Chia-Yen Dai, Yen-Hsu Chen, Ming-Lung Yu, Che-Hsin Lin, Ling-Shan Yu
Sensors and Actuators B: Chemical.2023; 394: 134278. CrossRef - A digital microfluidic platform coupled with colorimetric loop-mediated isothermal amplification for on-site visual diagnosis of multiple diseases
Mei Xie, Tianlan Chen, Zongwei Cai, Bo Lei, Cheng Dong
Lab on a Chip.2023; 23(12): 2778. CrossRef - Diagnostic Value of Nucleic Acid Amplification Tests for Tuberculous Pleural Effusion
Xu-Hui Wen, Yu-Ling Han, Xi-Shan Cao, Wen Zhao, Zhi Yan, Li Yan, Jian-Xun Wen, Zhi-De Hu, Wen-Qi Zheng
Future Microbiology.2023; 18(14): 971. CrossRef - Rapid and highly sensitive LAMP-CRISPR/Cas12a-based identification of bovine mastitis milk samples contaminated by Escherichia coli
Aisha Shaizadinova, Meruyert Amanzholova, Saveliy Kirillov, Aitbay Bulashev, Sailau Abeldenov
Journal of Agriculture and Food Research.2023; 14: 100721. CrossRef - Development of a Naked Eye CRISPR-Cas12a and -Cas13a Multiplex Point-of-Care Detection of Genetically Modified Swine
Yuan Wang, Lanting Fu, Dagang Tao, Xiaosong Han, Bingrong Xu, Manfei Deng, Sheng Li, Changzhi Zhao, Xinyun Li, Shuhong Zhao, Ping Gong, Yu Yang, Emmanuel Mulaya Khazalwa, Yunlong Ma, Jinxue Ruan, Changchun Li, Shengsong Xie
ACS Synthetic Biology.2023; 12(7): 2051. CrossRef - One-pot platform for rapid detecting virus utilizing recombinase polymerase amplification and CRISPR/Cas12a
Yifan Xiong, Gaihua Cao, Xiaolong Chen, Jun Yang, Meimei Shi, Yu Wang, Fuping Nie, Danqun Huo, Changjun Hou
Applied Microbiology and Biotechnology.2022; 106(12): 4607. CrossRef - RNA-based isothermal amplification technology and its clinical application in pathogen infection
Jie Teng, Fang Liu, Li Chang, Qiuxia Yang, Guanglu Che, Shuyu Lai, Yuan Tan, Jiaxin Duan, Yongmei Jiang
Reviews in Analytical Chemistry.2022; 41(1): 301. CrossRef - Loop-Mediated Isothermal Amplification Coupled With Nanoparticle-Based Lateral Biosensor for Rapid, Sensitive, and Specific Detection of Bordetella pertussis
Chunrong Sun, Fei Xiao, Jin Fu, Xiaolan Huang, Nan Jia, Zheng Xu, Yi Wang, Xiaodai Cui
Frontiers in Bioengineering and Biotechnology.2022;[Epub] CrossRef - Sensitive, Single-Pot, Two-Stage Assay for Hepatitis Viruses
Youngung Seok, Qingtian Yin, Huiwen Bai, Haim H. Bau
Analytical Chemistry.2022; 94(3): 1778. CrossRef - Loop-Mediated Isothermal Amplification (LAMP) and SYBR Green qPCR for Fast and Reliable Detection of Geosmithia morbida (Kolařik) in Infected Walnut
Domenico Rizzo, Chiara Aglietti, Alessandra Benigno, Matteo Bracalini, Daniele Da Lio, Linda Bartolini, Giovanni Cappellini, Antonio Aronadio, Cristina Francia, Nicola Luchi, Alberto Santini, Santa Olga Cacciola, Tiziana Panzavolta, Salvatore Moricca
Plants.2022; 11(9): 1239. CrossRef - End-to-end system for rapid and sensitive early-detection of SARS-CoV-2 for resource-poor and field-test environments using a $51 lab-in-a-backpack
E. Emily Lin, Umar A. Razzaque, Stephen A. Burrows, Stoyan K. Smoukov, Etsuro Ito
PLOS ONE.2022; 17(1): e0259886. CrossRef - An Advanced One-Step RT-LAMP for Rapid Detection ofLittle cherry virus 2Combined with High-Throughput Sequence-Based Phylogenomics Reveal Divergent Flowering Cherry Isolates
Rachid Tahzima, Yoika Foucart, Gertie Peusens, Jean-Sébastien Reynard, Sébastien Massart, Tim Beliën, Kris De Jonghe
Plant Disease.2022; 106(3): 835. CrossRef - New Frontier in Terahertz Technologies for Virus Sensing
Tiziana Mancini, Augusto Marcelli, Stefano Lupi, Annalisa D’Arco
Electronics.2022; 12(1): 135. CrossRef - A microfluidic diagnostic device with air plug-in valves for the simultaneous genetic detection of various food allergens
Daigo Natsuhara, Sae Misawa, Ryogo Saito, Koki Shirai, Shunya Okamoto, Moeto Nagai, Masashi Kitamura, Takayuki Shibata
Scientific Reports.2022;[Epub] CrossRef - A Systematic Review on Suitability of Molecular Techniques for Diagnosis and Research into Infectious Diseases of Concern in Resource-Limited Settings
Akua K. Yalley, Selasie Ahiatrogah, Anna A. Kafintu-Kwashie, Gloria Amegatcher, Diana Prah, Akua K. Botwe, Mildred A. Adusei-Poku, Evangeline Obodai, Nicholas I. Nii-Trebi
Current Issues in Molecular Biology.2022; 44(10): 4367. CrossRef - Detection and Control of Pantoea agglomerans Causing Plum Bacterial Shot-Hole Disease by Loop-Mediated Isothermal Amplification Technique
Ran Shu, Xianhui Yin, Youhua Long, Jun Yuan, Houyin Zhou
Frontiers in Microbiology.2022;[Epub] CrossRef - Accurate Detection of Salmonella Based on Microfluidic Chip to Avoid Aerosol Contamination
Yining Luo, Shan Shan, Shuanglong Wang, Jinlin Li, Daofeng Liu, Weihua Lai
Foods.2022; 11(23): 3887. CrossRef - Salmonella spp. in Chicken: Prevalence, Antimicrobial Resistance, and Detection Methods
Si Jie Tan, Syamilah Nordin, Effarizah Mohd Esah, Norlia Mahror
Microbiology Research.2022; 13(4): 691. CrossRef - Comparative analysis of methods for isothermal amplification of nucleic acids
O. S. Chemisova, O. A. Tsyrulina, A. L. Trukhachev, A. K. Noskov
Journal of microbiology, epidemiology and immunobiology.2022; 99(1): 126. CrossRef - Rapid detection of hepatitis C virus using recombinase polymerase amplification
Catherine T. Chia, Andrew T. Bender, Lorraine Lillis, Benjamin P. Sullivan, Coleman D. Martin, Wynn Burke, Charles Landis, David S. Boyle, Jonathan D. Posner, Kiyoshi Yasukawa
PLOS ONE.2022; 17(10): e0276582. CrossRef - Development of a photothermal bead-based nucleic acid amplification test (pbbNAAT) technique for a high-performance loop-mediated isothermal amplification (LAMP)–based point-of-care test (POCT)
Chih-Yu Chen, Hung-Wei Yang, Ping-Han Hsieh, Chia-Hsun Hsieh, Min-Hsien Wu
Biosensors and Bioelectronics.2022; 215: 114574. CrossRef - Development and Validation of a Novel COVID-19 nsp8 One-Tube RT-LAMP-CRISPR Assay for SARS-CoV-2 Diagnosis
Cyril Chik-Yan Yip, Siddharth Sridhar, Wan-Mui Chan, Jonathan Daniel Ip, Allen Wing-Ho Chu, Kit-Hang Leung, Vincent Chi-Chung Cheng, Kwok-Yung Yuen, Kelvin Kai-Wang To, Frederick S. B. Kibenge
Microbiology Spectrum.2022;[Epub] CrossRef - Electrochemical Detection for Isothermal Loop-Mediated Amplification of Pneumolysin Gene of Streptococcus pneumoniae Based on the Oxidation of Phenol Red Indicator
Andrea González-López, María Dolores Cima-Cabal, Pablo Rioboó-Legaspi, Estefanía Costa-Rama, María del Mar García-Suárez, M. Teresa Fernández-Abedul
Analytical Chemistry.2022; 94(38): 13061. CrossRef - Advances in nucleic acid amplification techniques (NAATs): COVID-19 point-of-care diagnostics as an example
Tongjia Kang, Jingming Lu, Tian Yu, Yi Long, Guozhen Liu
Biosensors and Bioelectronics.2022; 206: 114109. CrossRef - CRISPR-Cas Systems-Based Bacterial Detection: A Scoping Review
Kasturi Selvam, Mohamad Ahmad Najib, Muhammad Fazli Khalid, Mehmet Ozsoz, Ismail Aziah
Diagnostics.2022; 12(6): 1335. CrossRef - Development of Loop-Mediated Isothermal Amplification (LAMP) Assay for Specific and Sensitive Detection of Mycocentrospora acerina (Hart.) Causing Round Leaf Spot Disease in Sanqi (Panax notoginseng)
Chengzhong Lan, Lin Gan, Yuli Dai, Xiaofei Liu, Xiujuan Yang
Horticulturae.2022; 8(11): 1060. CrossRef - Development and Comparison of Seminested PCR, qPCR, and LAMP for the Rapid Detection of Arthrinium phaeospermum, the Causal Agent of Bamboo Blight
Han Zhang, Weiyi Yang, Liling Xie, Tianhui Zhu, Shuying Li, Shan Han, Tiantian Lin, Shujiang Li
Forests.2022; 13(6): 850. CrossRef - Rapid detection of Arothron species by real-time fluorescence and colorimetric loop-mediated isothermal amplification assays targeting the mitochondrial cytochrome b gene
Ruibin Xie, Jie Gao, Hui Li, Wenjie Yu, Juan Zhang, Nan Wang, Ailiang Chen
Journal of Food Composition and Analysis.2022; 111: 104631. CrossRef - Detection of Brucella S2 vaccine strain by a loop-mediated isothermal amplification (LAMP) method
Jiaming Mu, Qi Li, Xu Yan, Xiaowei Mao, Yaqin Shi, Yun Qin, Chunxia Liu, Wenlong Wang
Frontiers in Cellular and Infection Microbiology.2022;[Epub] CrossRef - Cleavable molecular beacon-based loop-mediated isothermal amplification assay for the detection of adulterated chicken in meat
Song Yan, Hangzhen Lan, Zhen Wu, Yangying Sun, Maolin Tu, Daodong Pan
Analytical and Bioanalytical Chemistry.2022; 414(28): 8081. CrossRef - Digital Droplet Loop-Mediated Isothermal Amplification Featuring a Molecular Beacon Assay, 3D Printed Droplet Generation, and Smartphone Imaging for Sequence-Specific DNA Detection
Shu-An Hsieh, Danial Shamsaei, Derek R. Eitzmann, Jared L. Anderson
Analytical Chemistry.2022; 94(34): 11949. CrossRef - Development and Application of a Reverse-Transcription Recombinase-Aided Amplification Assay for Porcine Epidemic Diarrhea Virus
Xiuhong Wu, Yuanjia Liu, Liguo Gao, Zhuanqiang Yan, Qiqi Zhao, Feng Chen, Qingmei Xie, Xinheng Zhang
Viruses.2022; 14(3): 591. CrossRef - Alzheimer's Disease: A Silent Pandemic - A Systematic Review on
the Situation and Patent Landscape of the Diagnosis
Luis Daniel Goyzueta-Mamani, Miguel Angel Chávez-Fumagalli, Karla Alvarez-Fernandez, Jorge A. Aguilar-Pineda, Rita Nieto-Montesinos, Gonzalo Davila Del-Carpio, Karin J. Vera-Lopez, Christian L. Lino Cardenas
Recent Patents on Biotechnology.2022; 16(4): 355. CrossRef - Electrochemical Biosensors Based on Micro‐fabricated Devices for Point‐of‐Care Testing: A Review
Yuting Zhang, Nandi Zhou
Electroanalysis.2022; 34(2): 168. CrossRef - Development of a loop-mediated isothermal amplification assay for the rapid detection of Russula subnigricans and Russula japonica
Pan Long, Zijuan Jiang, Zhengmi He, Zuohong Chen
Frontiers in Microbiology.2022;[Epub] CrossRef - Combining recombinase polymerase amplification and DNA‐templated reaction for SARS‐CoV‐2 sensing with dual fluorescence and lateral flow assay output
Lluc Farrera‐Soler, Arthur Gonse, Ki Tae Kim, Sofia Barluenga, Nicolas Winssinger
Biopolymers.2022;[Epub] CrossRef - Advantages and limitations of microscopy and molecular detections for diagnosis of soil-transmitted helminths: An overview
N. Miswan, G. V. Singham, N. Othman
Helminthologia.2022; 59(4): 321. CrossRef - A precise review on NAATs‐based diagnostic assays for COVID‐19: A motion in fast POC molecular tests
Bahareh Maleki, Zohreh Hojati
European Journal of Clinical Investigation.2022;[Epub] CrossRef - Rapid Identification of HSA Genetically Modified Goats by Combining Recombinase Polymerase Amplification (RPA) with Lateral Flow Dipstick (LFD)
Qiuju Su, Kaifeng Guan, Xiang Zhou, Yang Zhou, Bang Liu
Agriculture.2022; 12(7): 927. CrossRef - Preliminary establishment and validation of a loop-mediated isothermal amplification assay for convenient screening of 13 types of high-risk human papillomaviruses in cervical secretions
Lijuan Zhang, Yan Ju, Haixu Hu, Chunhui Ma, Yan Huang, Lili Gong, Yi Liu, Lihong Bian
Journal of Virological Methods.2022; 303: 114501. CrossRef - Rapid and simple detection of influenza virus via isothermal amplification lateral flow assay
Minju Jang, SeJin Kim, Junkyu Song, Sanghyo Kim
Analytical and Bioanalytical Chemistry.2022; 414(16): 4685. CrossRef - Internal heating method of loop-mediated isothermal amplification for detection of HPV-6 DNA
Huan-Huan Zhu, Yuan Li, Li-Xia Wu, Ke-Sheng Wang, Yue Zhang, Qiang-Yuan Fan, Zun-Zhen Ming, Wei-Qin Chen, Wei-Wei Liu
Microchimica Acta.2022;[Epub] CrossRef - A simple and rapid method to assay SARS-CoV-2 RNA based on a primer exchange reaction
Dayong Li, Chengjie Duan, Wenting Cheng, Youjing gong, Yanheng Yao, Xiaoping Wang, Zhongyun Wang, Yang Xiang
Chemical Communications.2022; 58(28): 4484. CrossRef - Self-Assembled Inkjet Printer for Droplet Digital Loop-Mediated Isothermal Amplification
Zhaoxuan Fan, Yucheng Sun, Jin-Ming Lin
Chemosensors.2022; 10(7): 247. CrossRef - IS1081-based Multi-targeted LAMP: An Opportunity to Detect Tubercular Uveitis
Megha Sharma, Ramandeep Singh, Aman Sharma, Vishali Gupta, Kusum Sharma
Ocular Immunology and Inflammation.2022; 30(1): 168. CrossRef - Circular RNA detection methods: A minireview
Zhang Mi, Chen Zhongqiang, Jiang Caiyun, Liu Yanan, Wu Jianhua, Liu Liang
Talanta.2022; 238: 123066. CrossRef - Diagnosis of disease relevant nucleic acid biomarkers with off-the-shelf devices
Lijuan Qi, Yan Du
Journal of Materials Chemistry B.2022; 10(21): 3959. CrossRef - Polymerase chain reaction and loop-mediated isothermal amplification targeting lic13162, lic20239, and lipL32 genes for leptospirosis diagnosis
Violetta Dias Pacce, Margarida Neves Souza, Natasha Rodrigues de Oliveira, Frederico Schmitt Kremer, Sérgio Jorge, Nilo Ikuta, Vagner Ricardo Lunge, Odir Antônio Dellagostin
Brazilian Journal of Microbiology.2022; 53(2): 1029. CrossRef - Ultrasensitive quantitation of circulating miR-195–5p with triple strand displacement amplification cascade
Xuzhi Wang, Shuzhi Tang, Shengnan Ye, Zhou Cheng, Jianhua Xu, Bo-wen Li, Zhuo Chen
Talanta.2022; 242: 123300. CrossRef - Distance-based paper device using combined SYBR safe and gold nanoparticle probe LAMP assay to detect Leishmania among patients with HIV
Toon Ruang-areerate, Natkrittaya Saengsawang, Panthita Ruang-areerate, Nalin Ratnarathorn, Thanyapit Thita, Saovanee Leelayoova, Suradej Siripattanapipong, Kiattawee Choowongkomon, Wijitar Dungchai
Scientific Reports.2022;[Epub] CrossRef - Functional nucleic acid biosensors utilizing rolling circle amplification
Roger M. Bialy, Alexa Mainguy, Yingfu Li, John D. Brennan
Chemical Society Reviews.2022; 51(21): 9009. CrossRef - SARS-CoV-2 detection methods: A comprehensive review
Galyah Alhamid, Huseyin Tombuloglu, Ali A. Rabaan, Ebtesam Al-Suhaimi
Saudi Journal of Biological Sciences.2022; 29(11): 103465. CrossRef - Kinetics of Isothermal Dumbbell Exponential Amplification: Effects of Mix Composition on LAMP and Its Derivatives
Maud Savonnet, Mathilde Aubret, Patricia Laurent, Yoann Roupioz, Myriam Cubizolles, Arnaud Buhot
Biosensors.2022; 12(5): 346. CrossRef - A novel rapid detection of Senecavirus A using recombinase polymerase amplification (RPA) coupled with lateral flow (LF) dipstrip
Huibao Wang, Jinjie Dong, Tao Zhang, Fan Wang, Rui Yang, Yong Zhang, Xingxu Zhao
Analytical Biochemistry.2022; 646: 114627. CrossRef - A LAMP Assay for the Detection of Thecodiplosis japonensis, an Alien Gall Midge Species Pest of Pine Trees
Jipeng Jiao, Lili Ren, Rumin Chen, Jing Tao, Youqing Luo
Insects.2022; 13(6): 540. CrossRef - Review in isothermal amplification technology in food microbiological detection
Xiang Li, Xiaolong Zhang, Xiaoli Shi, Hongfei Shi, Zhouping Wang, Chifang Peng
Food Science and Biotechnology.2022; 31(12): 1501. CrossRef - A Comprehensive Evaluation of a Loop-Mediated Isothermal Amplification Assay for the Diagnosis of Pulmonary Tuberculosis in Children Using Bronchoalveolar Lavage Fluid
Lichao Fan, Bo Guan, Moxin Cheng, Chang Liu, Yao Tian, Ran Li, Yu Chen
Infection and Drug Resistance.2022; Volume 15: 975. CrossRef - Electrochemical Gene Amplification Signal Detection of Disposable Biochips Using Electrodes
Gyo-Rim Kim, Ji-Soo Hwang, Jong-Dae Kim, Yu-Seop Kim, Chan-Young Park
Sensors.2022; 22(22): 8624. CrossRef - Development of a Photothermal Bead-Based Nucleic Acid Amplification Test (Pbbnaat) Technique for a High-Performance Loop-Mediated Isothermal Amplification (Lamp)–Based Point-of-Care Test (Poct)
Min-Hsien Wu, Chen Chih-Yu, Hung Wei Yang, Ping-Han Hsieh, Chia-Hsun Hsieh
SSRN Electronic Journal .2022;[Epub] CrossRef - High-quality RNA improves sensitivity of SARS-CoV-2 detection by colorimetric RT-LAMP
Marta Puigmulé, Mònica Coll, Alexandra Pérez-Serra, Laura López, Ferran Picó, Nuria Neto, Mònica Corona, Mel·lina Pinsach-Abuin, Carles Ferrer-Costa, Maria Buxó, Francesc-Xavier Queralt, Ramon Brugada
Experimental Biology and Medicine.2022; 247(3): 276. CrossRef - Colorimetric and Real-Time Loop-Mediated Isothermal Amplification (LAMP) for Detection of Loa loa DNA in Human Blood Samples
Begoña Febrer-Sendra, Pedro Fernández-Soto, Beatriz Crego-Vicente, Juan García-Bernalt Diego, Thuy-Huong Ta-Tang, Pedro Berzosa, Rufino Nguema, Policarpo Ncogo, María Romay-Barja, Zaida Herrador, Agustín Benito, Antonio Muro
Diagnostics.2022; 12(5): 1079. CrossRef - Development and Evaluation of Loop-Mediated Isothermal Amplification (LAMP) as a Preliminary Diagnostic Tool for Brown Root Rot Disease Caused by Phellinus noxius (Corner) G. H. Cunningham in Hong Kong Urban Tree Management
Hao Zhang, Tze Kwun Ng, Kai Chun Lee, Zoen Wing Leung, Wai Fu Yau, Wai Shing Wong
Sustainability.2022; 14(15): 9708. CrossRef - VNN disease and status of breeding for resistance to NNV in aquaculture
Zituo Yang, Gen Hua Yue, Sek-Man Wong
Aquaculture and Fisheries.2022; 7(2): 147. CrossRef - Progression of LAMP as a Result of the COVID-19 Pandemic: Is PCR Finally Rivaled?
Cassidy Mannier, Jeong-Yeol Yoon
Biosensors.2022; 12(7): 492. CrossRef - Rapid and convenient detection of SARS-CoV-2 using a colorimetric triple-target reverse transcription loop-mediated isothermal amplification method
Zhu Yang, Nicole Y. Liu, Zhiwei Zhu, Minmin Xiao, Shuzhi Zhong, Qiqi Xue, Lina Nie, Jinhong Zhao
PeerJ.2022; 10: e14121. CrossRef - Facile, Rapid, and Low-Cost Detection for Influenza Viruses and Respiratory Syncytial Virus Based on a Catalytic DNA Assembly Circuit
Huina Wu, Mingyuan Zou, Xiaobo Fan, Feiya Su, Feng Xiao, Meiling Zhou, Yan Sun, Fengfeng Zhao, Guoqiu Wu
ACS Omega.2022; 7(17): 15074. CrossRef - Paper-Based Biosensors for the Detection of Nucleic Acids from Pathogens
Jiangshan Wang, Josiah Levi Davidson, Simerdeep Kaur, Andres A. Dextre, Mohsen Ranjbaran, Mohamed S. Kamel, Shreya Milind Athalye, Mohit S. Verma
Biosensors.2022; 12(12): 1094. CrossRef - Development and implementation of a simple and rapid extraction-free saliva SARS-CoV-2 RT-LAMP workflow for workplace surveillance
Zhiru Li, Jacqueline L. Bruce, Barry Cohen, Caileigh V. Cunningham, William E. Jack, Katell Kunin, Bradley W. Langhorst, Jacob Miller, Reynes A. Moncion, Catherine B. Poole, Prem K. Premsrirut, Guoping Ren, Richard J. Roberts, Nathan A. Tanner, Yinhua Zha
PLOS ONE.2022; 17(5): e0268692. CrossRef - Clinical Applications of Isothermal Diagnosis for Human Schistosomiasis
Ursula Panzner
Encyclopedia.2022; 2(2): 690. CrossRef - Digital Microfluidics-Powered Real-Time Monitoring of Isothermal DNA Amplification of Cancer Biomarker
Beatriz Jorge Coelho, Bruno Veigas, Luís Bettencourt, Hugo Águas, Elvira Fortunato, Rodrigo Martins, Pedro V. Baptista, Rui Igreja
Biosensors.2022; 12(4): 201. CrossRef - Circulating Abnormal Extracellular Vesicles: Their Mechanism for Crossing Blood–Brain Barrier, Effects on Central Nervous System and Detection Methods
Boyue Fan, Jiaqi Gu, Jie Wu, Yifan Sun, Rongrong Huang, Han Shen, Xu Zhang, Zhiyang Li
Journal of Biomedical Nanotechnology.2022; 18(3): 640. CrossRef - Lab on a smartphone (LOS): A smartphone-integrated, plasmonic-enhanced optoelectrowetting (OEW) platform for on-chip water quality monitoring through LAMP assays
Si Kuan Thio, Sung Woo Bae, Sung-Yong Park
Sensors and Actuators B: Chemical.2022; 358: 131543. CrossRef - Development of a loop-mediated isothermal amplification assay for living modified canola GT73
A-Mi Yoon, Il Ryong Kim, Hye Song Lim, Jung Ro Lee, Wonkyun Choi
Plant Biotechnology Reports.2022; 16(4): 479. CrossRef - Inhibition of Non-specific Amplification in Loop-Mediated Isothermal Amplification via Tetramethylammonium Chloride
MinJu Jang, Sanghyo Kim
BioChip Journal.2022; 16(3): 326. CrossRef - Establishment and Evaluation of a Loop-Mediated Isothermal Amplification Assay for Rapid Detection of Pseudomonas fluorescens in Raw Milk
Yushan Bu, Wenjun Qiao, Zhengyuan Zhai, Tongjie Liu, Pimin Gong, Lanwei Zhang, Yanling Hao, Huaxi Yi
Frontiers in Microbiology.2022;[Epub] CrossRef - Molecular detection of “Candidatus Rickettsia tarasevichiae” by Loop-mediated Isothermal Amplification (LAMP) of the ompA gene
Jing Xue, Qing Ren, Rui Jian, Guang-Cheng Xie, Yongliang Chen, Jiangli Wang, Luanying Du, Wen-Ping Guo
Journal of Microbiological Methods.2022; 202: 106601. CrossRef - Recent advances in microfluidic devices for single-cell cultivation: methods and applications
Dian Anggraini, Nobutoshi Ota, Yigang Shen, Tao Tang, Yo Tanaka, Yoichiroh Hosokawa, Ming Li, Yaxiaer Yalikun
Lab on a Chip.2022; 22(8): 1438. CrossRef - Rapid and sensitive detection of Karenia mikimotoi by loop-mediated isothermal amplification combined with a lateral flow dipstick
Xiaotian Han, Ting Zhao, Tian Yan, Rencheng Yu
Environmental Science and Pollution Research.2022; 29(17): 24696. CrossRef - The Recent Original Perspectives on Nonculture-Based Bacteria Detection Methods: A Comprehensive Review
Ece Güven, Reha Onur Azizoglu
Foodborne Pathogens and Disease.2022; 19(7): 425. CrossRef - A flap endonuclease 1-assisted universal viral nucleic acid sensing system using surface-enhanced Raman scattering
Joowon Park, Jinyoung Kim, Chaewon Park, Jong-Woo Lim, Minjoo Yeom, Daesub Song, Eunjung Kim, Seungjoo Haam
The Analyst.2022; 147(22): 5028. CrossRef - A review of the current and emerging detection methods of marine harmful microalgae
Fuguo Liu, Chunyun Zhang, Yuanyuan Wang, Guofu Chen
Science of The Total Environment.2022; 815: 152913. CrossRef - Loop-Mediated Isothermal Amplification for Detection of Plant Pathogens in Wheat (Triticum aestivum)
Sandra V. Gomez-Gutierrez, Stephen B. Goodwin
Frontiers in Plant Science.2022;[Epub] CrossRef - Entwicklung von LAMP‐basierten Schnelltestverfahren für den Nachweis der Kontaminanten Kurkuma und Färberdiestel in Safran
N. Holz, M. Fischer
Lebensmittelchemie.2022;[Epub] CrossRef - Alkaline lysis‐loop mediated isothermal amplification assay for rapid and on‐site authentication of buffalo (Bubalus bubalis) meat
Patil S. Girish, Aparana Kumari, Pathakota Gireesh‐Babu, Nagappa S. Karabasanavar, Balamanikandan Raja, Chitimalla Ramakrishna, Sukhadeo B. Barbuddhe
Journal of Food Safety.2022;[Epub] CrossRef - Tools and Techniques for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2)/COVID-19 Detection
Seyed Hamid Safiabadi Tali, Jason J. LeBlanc, Zubi Sadiq, Oyejide Damilola Oyewunmi, Carolina Camargo, Bahareh Nikpour, Narges Armanfard, Selena M. Sagan, Sana Jahanshahi-Anbuhi
Clinical Microbiology Reviews.2021;[Epub] CrossRef - Rapid visualization and detection of Staphylococcus aureus based on loop-mediated isothermal amplification
Chuan Wu, Yuanyuan Zeng, Yang He
World Journal of Microbiology and Biotechnology.2021;[Epub] CrossRef - Loop-Mediated Isothermal Amplification (LAMP) as a Promising Point-of-Care Diagnostic Strategy in Avian Virus Research
Faiz Padzil, Abdul Razak Mariatulqabtiah, Wen Siang Tan, Kok Lian Ho, Nurulfiza Mat Isa, Han Yih Lau, Jalila Abu, Kuo-Pin Chuang
Animals.2021; 12(1): 76. CrossRef - Rapid and Visual Detection of Vibrio parahaemolyticus in Aquatic Foods Using blaCARB-17 Gene-Based Loop-Mediated Isothermal Amplification with Lateral Flow Dipstick (LAMP-LFD)
Yuan-qing Hu, Xian-hui Huang, Li-qing Guo, Zi-chen Shen, Lin-xue LV, Feng-xia Li, Zan-hu Zhou, Dan-feng Zhang
Journal of Microbiology and Biotechnology.2021; 31(12): 1672. CrossRef - Using loop-mediated isothermal amplification for visual detection of porcine parvovirus 7
Yong Wang, Da Zhang, Caixia Bai, Menglin Li, Xiaolu Liu, Mengling Peng, Pei Sun, Yongdong Li
3 Biotech.2021;[Epub] CrossRef - Rapid and Specific Detection of the Poplar Black Spot Disease Caused by Marssonina brunnea Using Loop-Mediated Isothermal Amplification Assay
Qin Xiong, Linlin Zhang, Xinyue Zheng, Yulin Qian, Yaxin Zhang, Lijuan Zhao, Qiang Cheng
Plants.2021; 10(2): 253. CrossRef - LAMP in Neglected Tropical Diseases: A Focus on Parasites
Juan García-Bernalt Diego, Pedro Fernández-Soto, Antonio Muro
Diagnostics.2021; 11(3): 521. CrossRef - Recent innovations in cost-effective polymer and paper hybrid microfluidic devices
Wan Zhou, Maowei Dou, Sanjay S. Timilsina, Feng Xu, XiuJun Li
Lab on a Chip.2021; 21(14): 2658. CrossRef - Biology, Taxonomy, and Management of the Root-Knot Nematode (Meloidogyne incognita) in Sweet Potato
Gebissa Yigezu Wendimu, Jiban Shrestha
Advances in Agriculture.2021; 2021: 1. CrossRef - Development and evaluation of a loop-mediated isothermal amplification assay for clinical diagnosis of respiratory human adenoviruses emergent in China
Lei Hong, Jingyuan Li, Junping Lv, Siqi Chao, Yaqing Xu, Dayang Zou, Junjie Du, Binan Lu, Zongran Pang, Wenfeng Li, Wei Liu, Yuehua Ke, Shuxun Hou
Diagnostic Microbiology and Infectious Disease.2021; 101(1): 115401. CrossRef - Rapid and simple colorimetric loop-mediated isothermal amplification (LAMP) assay for the detection of Bovine alphaherpesvirus 1
Deborah Peltzer, Kurt Tobler, Cornel Fraefel, Madeleine Maley, Claudia Bachofen
Journal of Virological Methods.2021; 289: 114041. CrossRef - Real-time isothermal DNA amplification monitoring in picoliter volumes using an optical fiber sensor
Monika Janik, Seyed Vahid Hamidi, Marcin Koba, Jonathan Perreault, Ryan Walsh, Wojtek J. Bock, Mateusz Śmietana
Lab on a Chip.2021; 21(2): 397. CrossRef - Functionalized Co2FeAl Nanoparticles for Detection of SARS CoV-2 Based on Reverse Transcriptase Loop-Mediated Isothermal Amplification
Ujjwal Ranjan Dahiya, Guru Dutt Gupt, Rajendra S. Dhaka, Dinesh Kalyanasundaram
ACS Applied Nano Materials.2021; 4(6): 5871. CrossRef - An innovative and user-friendly smartphone-assisted molecular diagnostic approach for rapid detection of canine vector-borne diseases
Archana Upadhyay, Raza Muhammad Waleed, Jinhua Wang, Jianguo Zhao, Qingfeng Guan, Chenghong Liao, Qian Han
Parasitology Research.2021; 120(5): 1799. CrossRef - Rapid diagnosis of Leishmania infection with a portable loop-mediated isothermal amplification device
Madhu Puri, Harsimran Kaur Brar, Nimisha Mittal, Evanka Madan, Rajesh Srinivasan, Kapil Rawat, Srija Moulik, Mitali Chatterjee, Sai Siva Gorthi, Rohini Muthuswami, Rentala Madhubala
Journal of Biosciences.2021;[Epub] CrossRef - The Mbam drainage system and onchocerciasis transmission post ivermectin mass drug administration (MDA) campaign, Cameroon
Raphael Awah Abong, Glory Ngongeh Amambo, Ali Ahamat Hamid, Belinda Agbor Enow, Amuam Andrew Beng, Franck Noel Nietcho, Theobald Mue Nji, Abdel Jelil Njouendou, Manuel Ritter, Mathias Eyong Esum, Kebede Deribe, Jerome Fru Cho, Fanny Fri Fombad, Peter Ivo
PLOS Neglected Tropical Diseases.2021; 15(1): e0008926. CrossRef - Molecular detection of fungal pathogens and induction of phytoimmunity using bioinoculants
B. N. Chakraborty, U. Chakraborty
Indian Phytopathology.2021; 74(2): 307. CrossRef - Molecular techniques for the genomic viral RNA detection of West Nile, Dengue, Zika and Chikungunya arboviruses: a narrative review
Antonio Mori, Elena Pomari, Michela Deiana, Francesca Perandin, Sara Caldrer, Fabio Formenti, Manuela Mistretta, Pierantonio Orza, Andrea Ragusa, Chiara Piubelli
Expert Review of Molecular Diagnostics.2021; 21(6): 591. CrossRef - A newly developed paper embedded microchip based on LAMP for rapid multiple detections of foodborne pathogens
Mimi Zhang, Jinfeng Liu, Zhiqiang Shen, Yongxin Liu, Yang Song, Yu Liang, Zhende Li, Lingmei Nie, Yanjun Fang, Youquan Zhao
BMC Microbiology.2021;[Epub] CrossRef - Methods of Respiratory Virus Detection: Advances towards Point-of-Care for Early Intervention
Siming Lu, Sha Lin, Hongrui Zhang, Liguo Liang, Shien Shen
Micromachines.2021; 12(6): 697. CrossRef - Systematic evaluation, verification and comparison of tuberculosis‐related non‐coding RNA diagnostic panels
Mengyuan Lyu, Yuhui Cheng, Jian Zhou, Weelic Chong, Yili Wang, Wei Xu, Binwu Ying
Journal of Cellular and Molecular Medicine.2021; 25(1): 184. CrossRef - Molecular diagnosis of toxoplasmosis: recent advances and a look to the future
Marie Gladys Robert, Marie-Pierre Brenier-Pinchart, Cécile Garnaud, Hélène Fricker-Hidalgo, Hervé Pelloux
Expert Review of Anti-infective Therapy.2021; 19(12): 1529. CrossRef - Efficacy of Loop-Mediated Isothermal Amplification for H. pylori Detection as Point-of-Care Testing by Noninvasive Sampling
Amir Sohrabi, Joar Franzen, Nikolaos Tertipis, Ulrika Zagai, Wanxin Li, Zongli Zheng, Weimin Ye
Diagnostics.2021; 11(9): 1538. CrossRef - A Simple, Affordable, Rapid, Stabilized, Colorimetric, Versatile RT-LAMP Assay to Detect SARS-CoV-2
Juan García-Bernalt Diego, Pedro Fernández-Soto, Marta Domínguez-Gil, Moncef Belhassen-García, Juan Luis Muñoz Bellido, Antonio Muro
Diagnostics.2021; 11(3): 438. CrossRef - Development and evaluation of recombinase polymerase amplification combined with lateral flow dipstick assays for co-detection of epizootic haemorrhagic disease virus and the Palyam serogroup virus
Zhuo-ran Li, Zhen-xing Yang, Zhan-hong Li, Xiang Gao, Zhong-yan Hu, Heng Yang, De-fang Liao
BMC Veterinary Research.2021;[Epub] CrossRef - Signal Extraction, Transformation, and Magnification for Ultrasensitive and Specific Detection of Nucleic Acids
Hongfei He, Guangcheng Luo, Jun Zhang, Ling Tang, Yan Zhou, Bei Hu, Jianyuan Dai, Zhen Huang
Analytical Chemistry.2021; 93(30): 10611. CrossRef - Single- and Two-Stage, Closed-Tube, Point-of-Care, Molecular Detection of SARS-CoV-2
Jinzhao Song, Mohamed El-Tholoth, Yize Li, Jevon Graham-Wooten, Yining Liang, Juan Li, Weijian Li, Susan R. Weiss, Ronald G. Collman, Haim H. Bau
Analytical Chemistry.2021; 93(38): 13063. CrossRef - Virus Detection: A Review of the Current and Emerging Molecular and Immunological Methods
A. Cassedy, A. Parle-McDermott, R. O’Kennedy
Frontiers in Molecular Biosciences.2021;[Epub] CrossRef - Rapid Detection of Pityophthorus juglandis (Blackman) (Coleoptera, Curculionidae) with the Loop-Mediated Isothermal Amplification (LAMP) Method
Domenico Rizzo, Salvatore Moricca, Matteo Bracalini, Alessandra Benigno, Umberto Bernardo, Nicola Luchi, Daniele Da Lio, Francesco Nugnes, Giovanni Cappellini, Chiara Salemi, Santa Olga Cacciola, Tiziana Panzavolta
Plants.2021; 10(6): 1048. CrossRef - Quantitative Evaluation of the Larval Density of Sea Potato Acaudina spp. with Mitochondrial Molecular Marker
Xiang Li, Guilin Wang, Yunfan Li, Wei Liu, Chao Lu, Yuchen Guo, Wen Huang, Jinhui Wang, Bo Dong
Journal of Ocean University of China.2021; 20(3): 681. CrossRef - Isothermal Nucleic Acid Amplification Technologies for the Detection of Equine Viral Pathogens
Alexandra Knox, Travis Beddoe
Animals.2021; 11(7): 2150. CrossRef - Development of loop-mediated isothermal amplification (LAMP) assay using SYBR safe and gold-nanoparticle probe for detection of Leishmania in HIV patients
Toon Ruang-areerate, Charanyarut Sukphattanaudomchoke, Thanyapit Thita, Saovanee Leelayoova, Phunlerd Piyaraj, Mathirut Mungthin, Patcharapan Suwannin, Duangporn Polpanich, Tienrat Tangchaikeeree, Kulachart Jangpatarapongsa, Kiattawee Choowongkomon, Surad
Scientific Reports.2021;[Epub] CrossRef - Isothermal amplifications – a comprehensive review on current methods
Jörn Glökler, Theam Soon Lim, Jeunice Ida, Marcus Frohme
Critical Reviews in Biochemistry and Molecular Biology.2021; 56(6): 543. CrossRef - Application of Nanotechnology for Sensitive Detection of Low-Abundance Single-Nucleotide Variations in Genomic DNA: A Review
Mahwash Mukhtar, Saman Sargazi, Mahmood Barani, Henning Madry, Abbas Rahdar, Magali Cucchiarini
Nanomaterials.2021; 11(6): 1384. CrossRef - Loop‐mediated isothermal amplification (LAMP): An effective molecular point‐of‐care technique for the rapid diagnosis of coronavirus SARS‐CoV‐2
Melek Chaouch
Reviews in Medical Virology.2021;[Epub] CrossRef - Heat-enhancing aggregation of gold nanoparticles combined with loop-mediated isothermal amplification (HAG-LAMP) for Plasmodium falciparum detection
Patcharapan Suwannin, Duangporn Polpanich, Saovanee Leelayoova, Mathirut Mungthin, Pramuan Tangboriboonrat, Abdelhamid Elaissari, Kulachart Jangpatarapongsa, Toon Ruang-areerate, Tienrat Tangchaikeeree
Journal of Pharmaceutical and Biomedical Analysis.2021; 203: 114178. CrossRef - RLEP LAMP for the laboratory confirmation of leprosy: towards a point-of-care test
Malkin Saar, Marcus Beissner, Fatih Gültekin, Issaka Maman, Karl-Heinz Herbinger, Gisela Bretzel
BMC Infectious Diseases.2021;[Epub] CrossRef - Isothermal haRPA detection of blaCTX-M in bacterial isolates from water samples and comparison with qPCR
Lisa Göpfert, Martin Elsner, Michael Seidel
Analytical Methods.2021; 13(4): 552. CrossRef - Diagnosing the drug resistance signature in Plasmodium falciparum: a review from contemporary methods to novel approaches
Laxman Kumar Murmu, Arpita Arsmika Sahu, Tapan Kumar Barik
Journal of Parasitic Diseases.2021; 45(3): 869. CrossRef - Automated parasitological diagnosis in clinical microbiology laboratories
Gema Fernández-Rivas, Belén Rivaya, Nona Romaní, Jun Hao Wang Wang, Mireya Alcaide, Lurdes Matas
Scientific Reports.2021;[Epub] CrossRef - Development of a simple and accurate molecular tool for Spodoptera frugiperda species identification using LAMP
Juil Kim, Hwa Y Nam, Min Kwon, Hyun J Kim, Hwi J Yi, Sabine Haenniger, Melanie Unbehend, David G Heckel
Pest Management Science.2021; 77(7): 3145. CrossRef - Loop-Mediated Isothermal Amplification vs. Guobiao Standards Method for Detection of Salmonella in Yoghurt and Yoghurt-Based Drinks
Jianwei Huo, Yan Huang, Raj Rajagopal
International Journal of Dairy Science.2021; 16(3): 90. CrossRef - Ultrastaging Using Ex Vivo Sentinel Lymph Node Mapping and One-Step Nucleic Acid Amplification (OSNA) in Gastric Cancer: Experiences of a European Center
Bruno Märkl, Bianca Grosser, Kerstin Bauer, Dmytro Vlasenko, Gerhard Schenkirsch, Andreas Probst, Bernadette Kriening
Cancers.2021; 13(11): 2683. CrossRef - Assessing the Use of DNA Detection Platforms Combined with Passive Wind-Powered Spore Traps for Early Surveillance of Potato and Tomato Late Blight in Canada
Yaima Arocha Rosete, Henry To, Martin Evans, Kristine White, Michael Saleh, Cheryl Trueman, Joseph Tomecek, Dennis Van Dyk, Richard C. Summerbell, James A. Scott
Plant Disease.2021; 105(11): 3610. CrossRef - Evaluation of a commercial loop-mediated isothermal amplification assay, 3MTM Molecular Detection Assay 2 – Campylobacter, for the detection of Campylobacter from poultry matrices
R. Rajagopal, C. A. Barnes, J. M. David, J. Goseland, J. Goseland
British Poultry Science.2021; 62(3): 404. CrossRef - Honey bee sHSP are responsive to diverse proteostatic stresses and potentially promising biomarkers of honey bee stress
Samantha R. Shih, Dunay M. Bach, Nicole C. Rondeau, Jessica Sam, Natalie L. Lovinger, Allison J. Lopatkin, Jonathan W. Snow
Scientific Reports.2021;[Epub] CrossRef -
WarmStart colorimetric RT‐LAMP for the rapid, sensitive and specific detection of Enteroviruses
A–D
targeting the 5′UTR region
M. Daskou, T.G. Dimitriou, D.S. Alexopoulou, D. Tsakogiannis, G.D. Amoutzias, D. Mossialos, Z. Kyriakopoulou, P. Markoulatos
Journal of Applied Microbiology.2021; 130(1): 292. CrossRef - Viral Respiratory Infections: New Tools for a Rapid Diagnosis
Luna Colagrossi, Giordana Mattana, Livia Piccioni, Valeria Cento, Carlo Federico Perno
Seminars in Respiratory and Critical Care Medicine.2021; 42(06): 747. CrossRef - Total microfluidic platform strategy for liquid biopsy
Hoyoon Lee, Wonhwi Na, Sehyun Shin
Journal of Cellular Biotechnology.2021; 6(2): 113. CrossRef - Virus recognition with terahertz radiation: drawbacks and potentialities
Marta Di Fabrizio, Stefano Lupi, Annalisa D’Arco
Journal of Physics: Photonics.2021; 3(3): 032001. CrossRef - CRISPR technology incorporating amplification strategies: molecular assays for nucleic acids, proteins, and small molecules
Wei Feng, Ashley M. Newbigging, Jeffrey Tao, Yiren Cao, Hanyong Peng, Connie Le, Jinjun Wu, Bo Pang, Juan Li, D. Lorne Tyrrell, Hongquan Zhang, X. Chris Le
Chemical Science.2021; 12(13): 4683. CrossRef - Utilizing loop‐mediated isothermal amplification to detect the presence of Escherichia coli: An inquiry‐driven undergraduate laboratory module
Brandon G. Roy, Eric Ryndock, Courtney M. Lappas
Biochemistry and Molecular Biology Education.2021; 49(3): 475. CrossRef - A colorimetric IsoPCR for the rapid and sensitive visual detection of high-risk HPV16 in clinical samples with hydroxynaphthol blue
M. Daskou, D. Tsakogiannis, D.S. Alexopoulou, T.G Dimitriou, D. Mossialos, G.D Amoutzias, C. Kottaridi, P. Markoulatos
Journal of Virological Methods.2021; 290: 114072. CrossRef - Hand-Powered Microfluidics for Parallel Droplet Digital Loop-Mediated Isothermal Amplification Assays
Hao Yuan, Jingxuan Tian, Youchuang Chao, Yuh-Shiuan Chien, Ren-Hao Luo, Jun-Yu Guo, Shanshan Li, Yi-Ju Chou, Ho Cheung Shum, Chien-Fu Chen
ACS Sensors.2021; 6(8): 2868. CrossRef - Loop‐mediated isothermal amplification for the detection of SARS‐CoV‐2 in saliva
Monika Janíková, Július Hodosy, Peter Boor, Boris Klempa, Peter Celec
Microbial Biotechnology.2021; 14(1): 307. CrossRef - Electrogenerated Chemiluminescence Biosensor Based on Functionalized Two-Dimensional Metal–Organic Frameworks for Bacterial Detection and Antimicrobial Susceptibility Assays
Lina Sun, Yu Chen, Yuhong Duan, Fen Ma
ACS Applied Materials & Interfaces.2021; 13(32): 38923. CrossRef - Nucleic Acid-Based Diagnostic Tests for the Detection SARS-CoV-2: An Update
Choo Yee Yu, Kok Gan Chan, Chan Yean Yean, Geik Yong Ang
Diagnostics.2021; 11(1): 53. CrossRef - Use of some cost-effective technologies for a routine clinical pathology laboratory
Mercedes Vázquez, Laura Anfossi, Hadar Ben-Yoav, Lorena Diéguez, Thomas Karopka, Bartolomeo Della Ventura, Sara Abalde-Cela, Antonio Minopoli, Fabio Di Nardo, Vikas Kumar Shukla, Alexandra Teixeira, Asta Tvarijonaviciute, Lorena Franco-Martínez
Lab on a Chip.2021; 21(22): 4330. CrossRef - Microfluidic devices for multiplexed detection of foodborne pathogens
Xiaoying Han, Yuanhui Liu, Juxin Yin, Min Yue, Ying Mu
Food Research International.2021; 143: 110246. CrossRef - Rapid and Sensitive Detection of the Colistin Resistance Gene mcr-3 by Loop-Mediated Isothermal Amplification and Visual Inspection
Zhihai Liu, Changmei Guo, Yaru Zhang, Li Zhao, Zhihui Hao
Microbial Drug Resistance.2021; 27(10): 1328. CrossRef - Primers and visualization of LAMP: A rapid molecular identification method for Liposcelis entomophila (Enderlein) (Psocodea: Liposcelididae)
Lingyu Zeng, Yun Su, Vaclav Stejskal, George Opit, Radek Aulicky, Zhihong Li
Journal of Stored Products Research.2021; 93: 101855. CrossRef - Comparative evaluation of lateral flow immunoassays, LAMP, and quantitative PCR for diagnosis of fire blight in apple orchards
Jugpreet Singh, Della Cobb-Smith, Elizabeth Higgins, Awais Khan
Journal of Plant Pathology.2021; 103(S1): 131. CrossRef - Rapid detection ofmcyGgene of microcystins producing cyanobacteria in water samples by recombinase polymerase amplification combined with lateral flow strips
Jingjing Li, Mingbao Feng, Xin Yu
Journal of Water and Health.2021; 19(6): 907. CrossRef - Real-time fluorometric and end-point colorimetric isothermal assays for detection of equine pathogens C. psittaci and equine herpes virus 1: validation, comparison and application at the point of care
Martina Jelocnik, Sharon Nyari, Susan Anstey, Nicole Playford, Tamieka A. Fraser, Keith Mitchell, Anna Blishen, Nina M. Pollak, Joan Carrick, Catherine Chicken, Cheryl Jenkins
BMC Veterinary Research.2021;[Epub] CrossRef - Rapid and selective detection of macrocyclic trichothecene producing Stachybotrys chartarum strains by loop-mediated isothermal amplification (LAMP)
Johannes Köck, Christoph Gottschalk, Sebastian Ulrich, Karin Schwaiger, Manfred Gareis, Ludwig Niessen
Analytical and Bioanalytical Chemistry.2021; 413(19): 4801. CrossRef - Visual and Rapid Diagnosis of Neisseria gonorrhoeae Using Loop-Mediated Isothermal Amplification Combined With a Polymer Nanoparticle–Based Biosensor in Clinical Application
Xu Chen, Qingxue Zhou, Xueli Wu, Shuoshi Wang, Rui Liu, Shilei Dong, Wei Yuan
Frontiers in Molecular Biosciences.2021;[Epub] CrossRef - Electrochemical Strategy for Low-Cost Viral Detection
Marjon Zamani, James M. Robson, Andy Fan, Michael S. Bono, Ariel L. Furst, Catherine M. Klapperich
ACS Central Science.2021; 7(6): 963. CrossRef - Development of a loop-mediated isothermal amplification (LAMP) assay for the identification of the invasive wood borer Aromia bungii (Coleoptera: Cerambycidae) from frass
Domenico Rizzo, Nicola Luchi, Daniele Da Lio, Linda Bartolini, Francesco Nugnes, Giovanni Cappellini, Tommaso Bruscoli, Chiara Salemi, Raffaele V. Griffo, Antonio P. Garonna, Elisabetta Rossi
3 Biotech.2021;[Epub] CrossRef - Development of Three Molecular Diagnostic Tools for the Identification of the False Codling Moth (Lepidoptera: Tortricidae)
D Rizzo, D Da Lio, L Bartolini, G Cappellini, T Bruscoli, C Salemi, A Aronadio, D Del Nista, F Pennacchio, N Boersma, E Rossi, P Sacchetti, Brian Rector
Journal of Economic Entomology.2021; 114(4): 1796. CrossRef - Use of LAMP for Assessing Botrytis cinerea Colonization of Bunch Trash and Latent Infection of Berries in Grapevines
Melissa Si Ammour, Eleonora Castaldo, Giorgia Fedele, Vittorio Rossi
Plants.2020; 9(11): 1538. CrossRef - Rapid detection of two emerging viruses associated with necrotic symptoms in Areca catechu L. by reverse transcription loop-mediated isothermal amplification (RT-LAMP)
Guangyuan Zhao, Wentao Shen, Decai Tuo, Hongguang Cui, Pu Yan, Qinghua Tang, Guopeng Zhu, Xiaoying Li, Peng Zhou, Yindong Zhang
Journal of Virological Methods.2020; 281: 113795. CrossRef - Rapid differentiation of PEDV wild-type strains and classical attenuated vaccine strains by fluorescent probe-based reverse transcription recombinase polymerase amplification assay
Zhilin Wang, Xuerui Li, Youjun Shang, Jinyan Wu, Zhen Dong, Xiaoan Cao, Yongsheng Liu, Xi Lan
BMC Veterinary Research.2020;[Epub] CrossRef - Molecular and Immunological Diagnostic Techniques of Medical Viruses
Daniel Hussien Reta, Tesfaye Sisay Tessema, Addis Simachew Ashenef, Adey Feleke Desta, Wajana Lako Labisso, Solomon Tebeje Gizaw, Solomon Mequanente Abay, Daniel Seifu Melka, Fisseha Alemu Reta
International Journal of Microbiology.2020; 2020: 1. CrossRef - Molecular Approaches for Low-Cost Point-of-Care Pathogen Detection in Agriculture and Forestry
Paolo Baldi, Nicola La Porta
Frontiers in Plant Science.2020;[Epub] CrossRef - Loop-Mediated Isothermal Amplification as Point-of-Care Diagnosis for Neglected Parasitic Infections
Catalina Avendaño, Manuel Alfonso Patarroyo
International Journal of Molecular Sciences.2020; 21(21): 7981. CrossRef - COVID‐19 Clinical Diagnostics and Testing Technology
Cindy H. Chau, Jonathan D. Strope, William D. Figg
Pharmacotherapy: The Journal of Human Pharmacology and Drug Therapy.2020; 40(8): 857. CrossRef - Rapid visualized isothermal nucleic acid testing of Vibrio parahaemolyticus by polymerase spiral reaction
Shiyu He, Hongbo Jang, Chao Zhao, Kun Xu, Juan Wang, Bo Pang, Xiaoxue Si, Minghua Jin, Xiuling Song, Juan Li
Analytical and Bioanalytical Chemistry.2020; 412(1): 93. CrossRef - Highly sensitive and fast Legionella spp. in situ detection based on a loop mediated isothermal amplification technique combined to an electrochemical transduction system
Garbiñe Olabarria, Unai Eletxigerra, Isabel Rodriguez, Ainhoa Bilbao, Jesus Berganza, Santos Merino
Talanta.2020; 217: 121061. CrossRef - LAMP-LFD Based on Isothermal Amplification of Multicopy Gene ORF160b: Applicability for Highly Sensitive Low-Tech Screening of Allergenic Soybean (Glycine max) in Food
Stefanie M. Allgöwer, Chris A. Hartmann, Clarissa Lipinski, Vera Mahler, Stefanie Randow, Elke Völker, Thomas Holzhauser
Foods.2020; 9(12): 1741. CrossRef - Safety, Quality and Analytical Authentication of ḥalāl Meat Products, with Particular Emphasis on Salami: A Review
Maria Martuscelli, Annalisa Serio, Oriana Capezio, Dino Mastrocola
Foods.2020; 9(8): 1111. CrossRef - Diagnostic Values of Multiplex Loop-Mediated Isothermal Amplification and Multiplex Polymerase Chain Reaction for Detection of Methicillin-Resistant Staphylococcus aureus
Sara Kashani, Amir Houshang Alvandi, Ramin Abiri
Jundishapur Journal of Microbiology.2020;[Epub] CrossRef - Graphene oxide-based molecular diagnostic biosensor for simultaneous detection of Zika and dengue viruses
Ji-Seon Lee, Jungho Kim, Hojeong Shin, Dal-Hee Min
2D Materials.2020; 7(4): 044001. CrossRef - Sowing seeds for the future: The need for on-site plant diagnostics
Arabelle Cassedy, Ewen Mullins, Richard O'Kennedy
Biotechnology Advances.2020; 39: 107358. CrossRef - Comparison of Loop-Mediated Isothermal Amplification, Microscopy, Culture, and PCR for Diagnosis of Pulmonary Tuberculosis
Benjawan Phetsuksiri, Janisara Rudeeaneksin, Sopa Srisungngam, Supranee Bunchoo, Wiphat Klayut, Chie Nakajima, Shigeyugi Hamada, Yasuhiko Suzuki
Japanese Journal of Infectious Diseases.2020; 73(4): 272. CrossRef - Development and Evaluation of a Loop-mediated Isothermal Amplification Assay for the Rapid Detection and Identification of Pectobacterium carotovorum on Celery in the Field
Yanxia Shi, Zhiwen Jin, Xianglong Meng, Lixue Wang, Xuewen Xie, Ali Chai, Baoju Li
Horticultural Plant Journal.2020; 6(5): 313. CrossRef - Combining the Sensitivity of LAMP and Simplicity of Primer Extension via a DNA-Modified Nucleotide
Moritz Welter, Andreas Marx
Chemistry.2020; 2(2): 490. CrossRef - Application of loop-mediated isothermal amplification combined with lateral flow dipstick to rapid and sensitive detection of Alexandrium catenella
Liang Wang, Guofu Chen, Chunyun Zhang, Yuanyuan Wang, Rui Sun
Environmental Science and Pollution Research.2020; 27(4): 4246. CrossRef - The Development of Highly Specific and Sensitive Primers for the Detection of Potentially Allergenic Soybean (Glycine max) Using Loop-Mediated Isothermal Amplification Combined with Lateral Flow Dipstick (LAMP-LFD)
Stefanie M. Allgöwer, Chris A. Hartmann, Thomas Holzhauser
Foods.2020; 9(4): 423. CrossRef - Multiplex Digital MicroRNA Detection Using Cross-Inhibitory DNA Circuits
Yannick Rondelez, Guillaume Gines
ACS Sensors.2020; 5(8): 2430. CrossRef - Target-Catalyzed Assembly of Pyrene-Labeled Hairpins for Exponentially Amplified Biosensing
Zhengqing He, Jie Wu, Bin Qiao, Hua Pei, Qianfeng Xia, Qiang Wu, Huangxian Ju
ACS Applied Bio Materials.2020; 3(8): 5342. CrossRef - Critical review of methods for isothermal amplification of nucleic acids for environmental analysis
Dana M. Nieuwkerk, Asja Korajkic, Erika L. Valdespino, Michael P. Herrmann, Valerie J. Harwood
Journal of Microbiological Methods.2020; 179: 106099. CrossRef - A Loop-Mediated Isothermal Amplification Assay for the Detection of Treponema pallidum subsp. pertenue
Laud Anthony W. Basing, Shirley Victoria Simpson, Yaw Adu-Sarkodie, Jacqueline C. Linnes
The American Journal of Tropical Medicine and Hygiene.2020; 103(1): 253. CrossRef - Visual detection of high-risk HPV16 and HPV18 based on loop-mediated isothermal amplification
Zhaoxuan Fan, Xiao Feng, Weifei Zhang, Nan Li, Xueji Zhang, Jin-Ming Lin
Talanta.2020; 217: 121015. CrossRef - A real-time isothermal amplification based portable microfluidic system for simple and reliable detection of Vibrio splendidus
Runtao Zhong, Shilin Liu, Xiaohui Wang, Guohao Zhang, Ning Gong, Mengyu Wang, Yeqing Sun
Analytical Methods.2020; 12(23): 2985. CrossRef - Nucleic acid detection aboard the International Space Station by colorimetric loop‐mediated isothermal amplification (LAMP)
Julian Rubinfien, Kutay D. Atabay, Nicole M. Nichols, Nathan A. Tanner, John A. Pezza, Michelle M. Gray, Brandon M. Wagner, Jayme N. Poppin, Jordan T. Aken, Emily J. Gleason, Kevin D. Foley, David Scott Copeland, Sebastian Kraves, Ezequiel Alvarez Saavedr
FASEB BioAdvances.2020; 2(3): 160. CrossRef - Dynamic Laser Speckle Imaging Meets Machine Learning to Enable Rapid Antibacterial Susceptibility Testing (DyRAST)
Keren Zhou, Chen Zhou, Anjali Sapre, Jared Henry Pavlock, Ashley Weaver, Ritvik Muralidharan, Josh Noble, Taejung Chung, Jasna Kovac, Zhiwen Liu, Aida Ebrahimi
ACS Sensors.2020; 5(10): 3140. CrossRef - Detection of human papillomavirus in oropharyngeal squamous cell carcinoma
Fatin Hazwani Fauzi, Nurul Izzati Hamzan, Nurhayu Ab Rahman, Siti Suraiya, Suharni Mohamad
Journal of Zhejiang University-SCIENCE B.2020; 21(12): 961. CrossRef - Differential susceptibility of Onchocerca volvulus microfilaria to ivermectin in two areas of contrasting history of mass drug administration in Cameroon: relevance of microscopy and molecular techniques for the monitoring of skin microfilarial repopulati
Raphael Awah Abong, Glory N. Amambo, Patrick W. Chounna Ndongmo, Abdel Jelil Njouendou, Manuel Ritter, Amuam Andrew Beng, Mathias Eyong Esum, Kebede Deribe, Jerome Fru-Cho, Fanny F. Fombad, Theobald Mue Nji, Peter Ivo Enyong, Catherine B. Poole, Kenneth P
BMC Infectious Diseases.2020;[Epub] CrossRef - A LAMP at the end of the tunnel: A rapid, field deployable assay for the kauri dieback pathogen, Phytophthora agathidicida
Richard C. Winkworth, Briana C. W. Nelson, Stanley E. Bellgard, Chantal M. Probst, Patricia A. McLenachan, Peter J. Lockhart, Ruslan Kalendar
PLOS ONE.2020; 15(1): e0224007. CrossRef - Molecular Markers for Detecting Schistosoma Species by Loop-Mediated Isothermal Amplification
Pedro Fernández-Soto, Catalina Avendaño, Anna Sala-Vizcaíno, Beatriz Crego-Vicente, Begoña Febrer-Sendra, Juan García-Bernalt Diego, Ana Oleaga, Julio López-Abán, Belén Vicente, Manuel A. Patarroyo, Antonio Muro
Disease Markers.2020; 2020: 1. CrossRef - Molecular detection of Fusarium graminearum causing head blight of wheat by loop mediated isothermal amplification (LAMP) assay
S. Gupta, M. S. Saharan, M. S. Gurjar, J. Singh, B. M. Bashyal, R. Aggarwal
Indian Phytopathology.2020; 73(4): 667. CrossRef - Phytophthora agathidicida: research progress, cultural perspectives and knowledge gaps in the control and management of kauri dieback in New Zealand
R. E. Bradshaw, S. E. Bellgard, A. Black, B. R. Burns, M. L. Gerth, R. L. McDougal, P. M. Scott, N. W. Waipara, B. S. Weir, N. M. Williams, R. C. Winkworth, T. Ashcroft, E. L. Bradley, P. P. Dijkwel, Y. Guo, R. F. Lacey, C. H. Mesarich, P. Panda, I. J. Ho
Plant Pathology.2020; 69(1): 3. CrossRef - Development of a LAMP method for detecting the N75S mutant in SDHI-resistant Corynespora cassiicola
Jiamei Zhu, Lingyan Zhang, Hong Li, Yangyang Gao, Wei Mu, Feng Liu
Analytical Biochemistry.2020; 597: 113687. CrossRef - Comparative evaluation of loop-mediated isothermal amplification (LAMP) vs qPCR for detection of Toxoplasma gondii oocysts DNA in mussels
Loïc Durand, Stéphanie La Carbona, Alain Geffard, Alessia Possenti, Jitender P. Dubey, Marco Lalle
Experimental Parasitology.2020; 208: 107809. CrossRef - On-Site Detection of Tissues of Buffalo Origin by Loop-Mediated Isothermal Amplification (LAMP) Assay Targeting Mitochondrial Gene Sequences
Sarita Kumari, R. R. Kumar, S. K. Mendiratta, Deepak Kumar, Arun Kumar, Dhananjay Kumar, Preeti Rana, Jyoti Jawla
Food Analytical Methods.2020; 13(5): 1060. CrossRef - Rapid detection of pork using alkaline lysis- Loop Mediated Isothermal Amplification (AL-LAMP) technique
P.S. Girish, S.B. Barbuddhe, Aparana Kumari, Deepak B. Rawool, Nagappa S. Karabasanavar, M. Muthukumar, S. Vaithiyanathan
Food Control.2020; 110: 107015. CrossRef - Development of a reverse transcription loop-mediated isothermal amplification assay (RT-LAMP) that detects enteroviruses by targeting the highly conserved 5′-UTR region
M. Daskou, T. G. Dimitriou, G. Kouklamani-Giannouli, M. Nikolaidis, D. Mossialos, G. D. Amoutzias, P. Markoulatos
Virus Genes.2020; 56(2): 194. CrossRef - Cercospora beticola: The intoxicating lifestyle of the leaf spot pathogen of sugar beet
Lorena I. Rangel, Rebecca E. Spanner, Malaika K. Ebert, Sarah J. Pethybridge, Eva H. Stukenbrock, Ronnie de Jonge, Gary A. Secor, Melvin D. Bolton
Molecular Plant Pathology.2020; 21(8): 1020. CrossRef - Molecular Identification of Anoplophora glabripennis (Coleoptera: Cerambycidae) From Frass by Loop-Mediated Isothermal Amplification
Domenico Rizzo, Andrea Taddei, Daniele Da Lio, Tommaso Bruscoli, Giovanni Cappellini, Linda Bartolini, Chiara Salemi, Nicola Luchi, Fabrizio Pennacchio, Elisabetta Rossi, Brian Rector
Journal of Economic Entomology.2020; 113(6): 2911. CrossRef - Droplet and Microchamber‐Based Digital Loop‐Mediated Isothermal Amplification (dLAMP)
Hao Yuan, Youchuang Chao, Ho Cheung Shum
Small.2020;[Epub] CrossRef - Molecular Diagnosis of COVID-19: Challenges and Research Needs
Wei Feng, Ashley M. Newbigging, Connie Le, Bo Pang, Hanyong Peng, Yiren Cao, Jinjun Wu, Ghulam Abbas, Jin Song, Dian-Bing Wang, Mengmeng Cui, Jeffrey Tao, D. Lorne Tyrrell, Xian-En Zhang, Hongquan Zhang, X. Chris Le
Analytical Chemistry.2020; 92(15): 10196. CrossRef - Prospects For the Use of Loop Isothermal Amplification in the Diagnosis of Particularly Dangerous Infectious Diseases Caused by the Viruses of the Pathogenicity Group I
M. Yu. Kartashov, E. V. Chub, T. P. Mikryukova, E. V. Naidenova, V. A. Ternovoy
Problems of Particularly Dangerous Infections.2020; (2): 22. CrossRef - Effect of metal ions on isothermal amplification with Bst exo- DNA polymerase
Ravil R. Garafutdinov, Aidar R. Gilvanov, Olga Yu. Kupova, Assol R. Sakhabutdinova
International Journal of Biological Macromolecules.2020; 161: 1447. CrossRef - Advances in HIV diagnosis and monitoring
Md Alamgir Kabir, Hussein Zilouchian, Massimo Caputi, Waseem Asghar
Critical Reviews in Biotechnology.2020; 40(5): 623. CrossRef - A loop-mediated isothermal amplification (LAMP) assay for the consensus detection of human pathogenic Campylobacter species
Uma S. Babu, Lisa M. Harrison, Mark K. Mammel, Elmer C. Bigley, Kelli L. Hiett, Kannan V. Balan
Journal of Microbiological Methods.2020; 176: 106009. CrossRef - The Colorimetric Isothermal Multiple-Self-Matching-Initiated Amplification Using Cresol Red for Rapid and Sensitive Detection of Porcine Circovirus 3
Hongchao Gou, Zhibiao Bian, Rujian Cai, Zhiyong Jiang, Shuai Song, Yan Li, Pinpin Chu, Dongxia Yang, Ying-An Zang, Chunling Li
Frontiers in Veterinary Science.2020;[Epub] CrossRef - iso-μmGene: an isothermal amplification-based portable microfluidic system for simple, reliable and flexibly multiplexed genetic identification and quantification
Runtao Zhong, Shilin Liu, Guohao Zhang, Mengyu Wang, Yeqing Sun
The Analyst.2020; 145(13): 4627. CrossRef - Electrochemical Detection of Genomic DNA Utilizing Recombinase Polymerase Amplification and Stem-Loop Probe
Shirin Khaliliazar, Liangqi Ouyang, Andrew Piper, Georgios Chondrogiannis, Martin Hanze, Anna Herland, Mahiar Max Hamedi
ACS Omega.2020; 5(21): 12103. CrossRef - Use of real-time multiplex PCR, malaria rapid diagnostic test and microscopy to investigate the prevalence of Plasmodium species among febrile hospital patients in Sierra Leone
Tomasz A. Leski, Chris Rowe Taitt, Abdulai G. Swaray, Umaru Bangura, Nathanael D. Reynolds, Andrew Holtz, Chadwick Yasuda, Joseph Lahai, Joseph M. Lamin, Victoria Baio, Kathryn H. Jacobsen, Rashid Ansumana, David A. Stenger
Malaria Journal.2020;[Epub] CrossRef - Rapid detection of antibiotic resistance genes in lactic acid bacteria using PMMA-based microreactor arrays
Zengjun Jin, Guotao Ding, Guoxing Yang, Guiying Li, Wei Zhang, Lixin Yang, Weihao Li
Applied Microbiology and Biotechnology.2020; 104(14): 6375. CrossRef - Variplex™ test system fails to reliably detect SARS-CoV-2 directly from respiratory samples without RNA extraction
Florian Eckel, Franziska Küsters, Bernhard Drossel, Markus Konert, Hans Mattes, Stefan Schopf
European Journal of Clinical Microbiology & Infectious Diseases.2020; 39(12): 2373. CrossRef - Rapid detection of foodborne bacterial pathogens using visual high‐throughput microfluidic chip
Zengjun Jin, Guotao Ding, Guiying Li, Guoxing Yang, Yonghong Han, Ning Hao, Jian Deng, Yan Zhang, Wei Zhang, Weihao Li
Journal of Chemical Technology & Biotechnology.2020; 95(5): 1460. CrossRef - Development of a Species Diagnostic Molecular Tool for an Invasive Pest, Mythimna loreyi, Using LAMP
Hwa Yeun Nam, Min Kwon, Hyun Ju Kim, Juil Kim
Insects.2020; 11(11): 817. CrossRef - A Diagnostic Loop-Mediated Isothermal Amplification Method to Distinguish Helicoverpa armigera (Lepidoptera: Noctuidae) From Other Related Species in the New World
Takayuki Amano, Masashi Nomura, Jianxiu Yao
Journal of Insect Science.2020;[Epub] CrossRef - Simplified closed tube loop mediated isothermal amplification (LAMP) assay for visual diagnosis of Leishmania infection
Charanyarut Sukphattanaudomchoke, Suradej Siripattanapipong, Thanyapit Thita, Saovanee Leelayoova, Phunlerd Piyaraj, Mathirut Mungthin, Toon Ruang-areerate
Acta Tropica.2020; 212: 105651. CrossRef - Α 2-stage, nested-like nucleic acid amplification method (IsoPCR) for the highly sensitive detection of HPV16 and HPV18 DNA
M. Daskou, D. Tsakogiannis, T.G. Dimitriou, M. Manali, C. Apti, G.D. Amoutzias, D. Mossialos, C. Kottaridi, P. Markoulatos
Molecular and Cellular Probes.2019; 45: 1. CrossRef - Development of a loop-mediated isothermal amplification (LAMP) assay for the detection of Anaplasma marginale
Rodrigo Giglioti, César Cristiano Bassetto, Cintia Hiromi Okino, Henrique Nunes de Oliveira, Márcia Cristina de Sena Oliveira
Experimental and Applied Acarology.2019; 77(1): 65. CrossRef - Development of Three Loop-Mediated Isothermal Amplification (LAMP) Assays for the Rapid Detection of Calonectria ilicicola, Dactylonectria macrodidyma, and the Dactylonectria Genus in Avocado Roots
Louisamarie E. Parkinson, Duy P. Le, Elizabeth K. Dann
Plant Disease.2019; 103(8): 1865. CrossRef - Detection of Vibrio anguillarum and Vibrio alginolyticus by Singleplex and Duplex Loop-Mediated Isothermal Amplification (LAMP) Assays Targeted to groEL and fklB Genes
Mahbubul Pratik Siddique, Won Je Jang, Jong Min Lee, Md Tawheed Hasan, Chang-Hoon Kim, In-Soo Kong
International Microbiology.2019; 22(4): 501. CrossRef - A foldable isothermal amplification microdevice for fuchsin-based colorimetric detection of multiple foodborne pathogens
Thi Ngoc Diep Trinh, Nae Yoon Lee
Lab on a Chip.2019; 19(8): 1397. CrossRef - Rapid and semiquantitative detection of Staphylococcus epidermidis in humor samples by microfluidic platform
Xinlian Zhang, Xiaoxu Li, Qi Liu, Shaorui Ke, Yinghong Ji, Sixiu Liu, Guodong Sui
Sensors and Actuators B: Chemical.2019; 278: 8. CrossRef - A Review on Equine Piroplasmosis: Epidemiology, Vector Ecology, Risk Factors, Host Immunity, Diagnosis and Control
ThankGod E. Onyiche, Keisuke Suganuma, Ikuo Igarashi, Naoaki Yokoyama, Xuenan Xuan, Oriel Thekisoe
International Journal of Environmental Research and Public Health.2019; 16(10): 1736. CrossRef - Simple Visualized Detection Method of Virulence-Associated Genes of Vibrio cholerae by Loop-Mediated Isothermal Amplification
Mengjie Xu, Huiyu Fu, Dailing Chen, Zehuai Shao, Jun Zhu, Walid Q. Alali, Lanming Chen
Frontiers in Microbiology.2019;[Epub] CrossRef - Development of a reverse transcription-loop-mediated isothermal amplification (RT-LAMP) assay for the detection of porcine pegivirus
Hao Li, Kai Li, Zhen Bi, Jun Gu, Deping Song, Dan Lei, Suoxian Luo, Dongyan Huang, Qiong Wu, Zhen Ding, Leyi Wang, Yu Ye, Yuxin Tang
Journal of Virological Methods.2019; 270: 59. CrossRef - Pathogenic Bacteria Detection Using RNA-Based Loop-Mediated Isothermal-Amplification-Assisted Nucleic Acid Amplification via Droplet Microfluidics
Morteza Azizi, Meisam Zaferani, Soon Hon Cheong, Alireza Abbaspourrad
ACS Sensors.2019; 4(4): 841. CrossRef - Comparison of Loop-Mediated Isothermal Amplification and Real-Time PCR Assays for Detection of Strongyloides Larvae in Different Specimen Matrices
Matthew R. Watts, Rady Kim, Vishal Ahuja, Gemma J. Robertson, Yasmin Sultana, Michael C. Wehrhahn, Richard S. Bradbury, Gwendolyn L. Gilbert, Rogan Lee, Michael J. Loeffelholz
Journal of Clinical Microbiology.2019;[Epub] CrossRef - Development of an RT-LAMP assay for the detection of Lassa viruses in southeast and south-central Nigeria
Christelle M. Pemba, Yohei Kurosaki, Rokusuke Yoshikawa, Olamide K. Oloniniyi, Shuzo Urata, Maki Sueyoshi, Vahid R. Zadeh, Ifeanyi Nwafor, Michael O. Iroezindu, Nnenna A. Ajayi, Chinedu M. Chukwubike, Nneka M. Chika-Igwenyi, Anne C. Ndu, Damian U. Nwidi,
Journal of Virological Methods.2019; 269: 30. CrossRef - New sensitive and fast detection of Little cherry virus 1 using loop-mediated isothermal amplification (RT-LAMP)
Rachid Tahzima, Yoika Foucart, Gertie Peusens, Tim Beliën, Sébastien Massart, Kris De Jonghe
Journal of Virological Methods.2019; 265: 91. CrossRef - A versatile loop-mediated isothermal amplification microchip platform for Streptococcus pneumoniae and Mycoplasma pneumoniae testing at the point of care
Hua Wang, Zhan Ma, Juanxiu Qin, Zhen Shen, Qian Liu, Xiaoyin Chen, Hengliang Wang, Zhenghua An, Wu Liu, Min Li
Biosensors and Bioelectronics.2019; 126: 373. CrossRef - Development and Clinical Evaluation of Loop-Mediated Isothermal Amplification (LAMP) Assay for the Diagnosis of Human Visceral Leishmaniasis in Brazil
Daniel Moreira de Avelar, Débora Moreira Carvalho, Ana Rabello
BioMed Research International.2019; 2019: 1. CrossRef - Demonstration of a quantitative triplex LAMP assay with an improved probe-based readout for the detection of MRSA
Imaly A. Nanayakkara, Ian M. White
The Analyst.2019; 144(12): 3878. CrossRef - A simple method for sequencing the whole human mitochondrial genome directly from samples and its application to genetic testing
Yue Yao, Motoi Nishimura, Kei Murayama, Naomi Kuranobu, Satomi Tojo, Minako Beppu, Takayuki Ishige, Sakae Itoga, Sachio Tsuchida, Masato Mori, Masaki Takayanagi, Masataka Yokoyama, Kazuyuki Yamagata, Yoshihito Kishita, Yasushi Okazaki, Fumio Nomura, Kazuy
Scientific Reports.2019;[Epub] CrossRef - Microfluidic-Based Nucleic Acid Amplification Systems in Microbiology
Lena Gorgannezhad, Helen Stratton, Nam-Trung Nguyen
Micromachines.2019; 10(6): 408. CrossRef - Relative Performance of MinION (Oxford Nanopore Technologies) versus Sequel (Pacific Biosciences) Third-Generation Sequencing Instruments in Identification of Agricultural and Forest Fungal Pathogens
Kaire Loit, Kalev Adamson, Mohammad Bahram, Rasmus Puusepp, Sten Anslan, Riinu Kiiker, Rein Drenkhan, Leho Tedersoo, Irina S. Druzhinina
Applied and Environmental Microbiology.2019;[Epub] CrossRef - Detection of helminths by loop-mediated isothermal amplification assay: a review of updated technology and future outlook
Miao-Han Deng, Lan-Yi Zhong, Okanurak Kamolnetr, Yanin Limpanont, Zhi-Yue Lv
Infectious Diseases of Poverty.2019;[Epub] CrossRef - A Variety of Bio-nanogold in the Fabrication of Lateral Flow Biosensors for the Detection of Pathogenic Bacteria
Nan Cheng, Zhansen Yang, Weiran Wang, Xinxian Wang, Wentao Xu, Yunbo Luo
Current Topics in Medicinal Chemistry.2019; 19(27): 2476. CrossRef - Rapid detection of tilapia lake virus using a one-step reverse transcription loop-mediated isothermal amplification assay
Theerawut Phusantisampan, Puntanat Tattiyapong, Palita Mutrakulcharoen, Malinee Sriariyanun, Win Surachetpong
Aquaculture.2019; 507: 35. CrossRef - Loop-mediated isothermal amplification (LAMP): An advanced molecular point-of-care technique for the detection of Leishmania infection
Chukwunonso O. Nzelu, Hirotomo Kato, Nathan C. Peters, Sima Rafati
PLOS Neglected Tropical Diseases.2019; 13(11): e0007698. CrossRef - MorphoCatcher: a multiple-alignment based web tool for target selection and designing taxon-specific primers in the loop-mediated isothermal amplification method
Fedor V. Shirshikov, Yuri A. Pekov, Konstantin A. Miroshnikov
PeerJ.2019; 7: e6801. CrossRef - Shift of Sensitivity in Botrytis cinerea to Benzimidazole Fungicides in Strawberry Greenhouse Ascribing to the Rising-lowering of E198A Subpopulation and its Visual, On-site Monitoring by Loop-mediated Isothermal Amplification
Y. H. Liu, S. K. Yuan, X. R. Hu, C. Q. Zhang
Scientific Reports.2019;[Epub] CrossRef - Loop‐mediated isothermal amplification (LAMP) for the identification of invasive Aedes mosquito species
C. D. Schenkel, T. Kamber, F. Schaffner, A. Mathis, C. Silaghi
Medical and Veterinary Entomology.2019; 33(3): 345. CrossRef - qPCR and loop mediated isothermal amplification for rapid detection of Ustilago tritici
Hanwen Yan, Jian Zhang, Dongfang Ma, Junliang Yin
PeerJ.2019; 7: e7766. CrossRef - Rapid and Accurate Diagnosis of the Respiratory Disease Pertussis on a Point-of-Care Biochip
Maowei Dou, Natalie Macias, Feng Shen, Jennifer Dien Bard, Delfina C. Domínguez, XiuJun Li
EClinicalMedicine.2019; 8: 72. CrossRef - Measurement of microRNA with isothermal DNA amplification on fully automated immunoassay analyzers
Makoto Komori, Ken Komiya, Takuma Shirakawa, Takamitsu J. Morikawa, Toru Yoshimura
Analytical and Bioanalytical Chemistry.2019; 411(17): 3789. CrossRef - Isothermal Amplification Methods for the SNP Genotyping
Somayeh Heidari Sharafdarkolaee, Pooria Gill, Majid Motovali-Bashi, Fatemeh Heidari Sharafdarkolaee
Current Molecular Medicine.2019; 19(7): 461. CrossRef - Emerging ultrafast nucleic acid amplification technologies for next-generation molecular diagnostics
Sang Hun Lee, Seung-min Park, Brian N. Kim, Oh Seok Kwon, Won-Yep Rho, Bong-Hyun Jun
Biosensors and Bioelectronics.2019; 141: 111448. CrossRef - Detection of viable but nonculturable Vibrio parahaemolyticus in shrimp samples using improved real-time PCR and real-time LAMP methods
Xiao Cao, Lichao Zhao, Jingfeng Zhang, Xun Chen, Lei Shi, Xiang Fang, Hui Xie, Yanlei Chang, Li Wang
Food Control.2019; 103: 145. CrossRef - Detection of Potato ring rot Pathogen Clavibacter michiganensis subsp. sepedonicus by Loop-mediated isothermal amplification (LAMP) assay
Hasan Sagcan, Neslihan Turgut Kara
Scientific Reports.2019;[Epub] CrossRef - Rapid Antimicrobial Susceptibility Testing of Patient Urine Samples Using Large Volume Free-Solution Light Scattering Microscopy
Manni Mo, Yunze Yang, Fenni Zhang, Wenwen Jing, Rafael Iriya, John Popovich, Shaopeng Wang, Thomas Grys, Shelley E. Haydel, Nongjian Tao
Analytical Chemistry.2019; 91(15): 10164. CrossRef - EFFECTIVENESS OF THE LOOP-MEDIATED ISOTHERMAL AMPLIFICATION WITH FLUORESCENT DETECTION IN THE DIAGNOSIS OF PARVOVIRUS ENTERITIS IN CARNIVORES
O. A. Petrusha, T. L. Chernichenko, I. A. Kofiadi, V. V. Zverev, E. B. Faizuloev
Journal of microbiology, epidemiology and immunobiology.2019; 96(1): 90. CrossRef - Loop-Mediated Isothermal Amplification (LAMP) for the Diagnosis of Zika Virus: A Review
Severino Jefferson Ribeiro da Silva, Keith Pardee, Lindomar Pena
Viruses.2019; 12(1): 19. CrossRef - Personalized Approach as a Basis for the Future Diagnosis of Tuberculosis (Literature Review)
P. A. Khromova, V. V. Sinkov, E. D. Savilov
Acta Biomedica Scientifica (East Siberian Biomedical Journal).2019; 4(3): 127. CrossRef - A Loop-Mediated Isothermal Amplification Integrated G-Quadruplex Molecular Beacon (LAMP-GMB) Method for the Detection of Staphylococcus aureus in Food
Jingguo Xu, Yimin Hu, Jia Guo, Yumeng Yang, Jiarong Qiu, Xuanxuan Li, Zhihong Xin
Food Analytical Methods.2019; 12(2): 422. CrossRef - Graphene Oxide-Based Suppression of Nonspecificity in Loop-Mediated Isothermal Amplification Enabling the Sensitive Detection of Cyclooxygenase-2 mRNA in Colorectal Cancer
Qiuyuan Lin, Xin Ye, Zhipeng Huang, Bin Yang, Xueen Fang, Hui Chen, Jilie Kong
Analytical Chemistry.2019; 91(24): 15694. CrossRef - Real-time fluorescence loop-mediated isothermal amplification assay for rapid and sensitive detection of Streptococcus gallolyticus subsp. gallolyticus associated with colorectal cancer
Qiuyuan Lin, Xin Ye, Bin Yang, Xueen Fang, Hui Chen, Wenhao Weng, Jilie Kong
Analytical and Bioanalytical Chemistry.2019; 411(26): 6877. CrossRef - Fully integrated and slidable paper-embedded plastic microdevice for point-of-care testing of multiple foodborne pathogens
Kieu The Loan Trinh, Thi Ngoc Diep Trinh, Nae Yoon Lee
Biosensors and Bioelectronics.2019; 135: 120. CrossRef - A novel impedimetric sensor for detecting LAMP amplicons of pathogenic DNA based on magnetic separation
Sumaira Sharif, Yixian Wang, Zunzhong Ye, Zhen Wang, Qimin Qiu, Shengna Ying, Yibin Ying
Sensors and Actuators B: Chemical.2019; 301: 127051. CrossRef - Paper-Based All-in-One Origami Microdevice for Nucleic Acid Amplification Testing for Rapid Colorimetric Identification of Live Cells for Point-of-Care Testing
Phuoc Tung Trieu, Nae Yoon Lee
Analytical Chemistry.2019; 91(17): 11013. CrossRef - Detection of Schistosoma mansoni-derived DNA in human urine samples by loop-mediated isothermal amplification (LAMP)
Pedro Fernández-Soto, Javier Gandasegui, Cristina Carranza Rodríguez, José Luis Pérez-Arellano, Beatriz Crego-Vicente, Juan García-Bernalt Diego, Julio López-Abán, Belén Vicente, Antonio Muro, Fela Mendlovic
PLOS ONE.2019; 14(3): e0214125. CrossRef - Advances in the molecular diagnosis of tuberculosis: From probes to genomes
Diana Machado, Isabel Couto, Miguel Viveiros
Infection, Genetics and Evolution.2019; 72: 93. CrossRef - Loop Mediated Isothermal Amplification: A Promising Tool for Screening Genetic Mutations
Arjuna Srividya, Biswajit Maiti, Anirban Chakraborty, Gunimala Chakraborty
Molecular Diagnosis & Therapy.2019; 23(6): 723. CrossRef - Diagnosis and treatment of invasive fungal infections: looking ahead
Maurizio Sanguinetti, Brunella Posteraro, Catherine Beigelman-Aubry, Frederic Lamoth, Vincent Dunet, Monica Slavin, Malcolm D Richardson
Journal of Antimicrobial Chemotherapy.2019; 74(Supplement): ii27. CrossRef - Target-catalyzed hairpin structure-mediated padlock cyclization for ultrasensitive rolling circle amplification
Huanxia Song, Zhe Yang, Min Jiang, Guo Zhang, Yansha Gao, Zhifa Shen, Zai-Sheng Wu, Yongliang Lou
Talanta.2019; 204: 29. CrossRef - Rapid detection of the red fire ant Solenopsis invicta (Hymenoptera: Formicidae) by loop-mediated isothermal amplification
Nobuyoshi Nakajima, Yoshiko Sakamoto, Koichi Goka
Applied Entomology and Zoology.2019; 54(3): 319. CrossRef - Progress in loop-mediated isothermal amplification assay for detection of Schistosoma mansoni DNA: towards a ready-to-use test
J. García-Bernalt Diego, P. Fernández-Soto, B. Crego-Vicente, S. Alonso-Castrillejo, B. Febrer-Sendra, A. Gómez-Sánchez, B. Vicente, J. López-Abán, A. Muro
Scientific Reports.2019;[Epub] CrossRef - WarmStart colorimetric LAMP for the specific and rapid detection of HPV16 and HPV18 DNA
M. Daskou, D. Tsakogiannis, T.G. Dimitriou, G.D. Amoutzias, D. Mossialos, C. Kottaridi, C. Gartzonika, P. Markoulatos
Journal of Virological Methods.2019; 270: 87. CrossRef - Rapid point‐of‐care diagnostics for the detection of Chlamydia pecorum in koalas (Phascolarctos cinereus) using loop‐mediated isothermal amplification without nucleic acid purification
Lyndal S. Hulse, Sean McDonald, Stephen D. Johnston, Kenneth W. Beagley
MicrobiologyOpen.2019;[Epub] CrossRef - Reliability of direct varicella zoster virus loop-mediated isothermal amplification method for rapid diagnosis of breakthrough varicella
Yuki Higashimoto, Yoshiki Kawamura, Ayumi Kuboshiki, Fumihiko Hattori, Hiroki Miura, Naoko Nishimura, Takao Ozaki, Masaru Ihira, Tetsushi Yoshikawa
Journal of Clinical Virology.2019; 119: 53. CrossRef - In Silico Identification of Novel Biomarkers and Development of New Rapid Diagnostic Tests for the Filarial Parasites Mansonella perstans and Mansonella ozzardi
C. B. Poole, A. Sinha, L. Ettwiller, L. Apone, K. McKay, V. Panchapakesa, N. F. Lima, M. U. Ferreira, S. Wanji, C. K. S. Carlow
Scientific Reports.2019;[Epub] CrossRef - Cost Effectiveness of New Diagnostic Tools for Cutaneous Leishmaniasis in Afghanistan
Céline Aerts, Martijn Vink, Sayed Jalal Pashtoon, Sami Nahzat, Albert Picado, Israel Cruz, Elisa Sicuri
Applied Health Economics and Health Policy.2019; 17(2): 213. CrossRef - Development of real‐time fluorescent reverse transcription loop‐mediated isothermal amplification assays for rhinovirus detection
Mina Nakauchi, Ikuyo Takayama, Hitoshi Takahashi, Shohei Semba, Shinji Saito, Hideyuki Kubo, Atsushi Kaida, Kunihiro Oba, Shiho Nagata, Takato Odagiri, Tsutomu Kageyama
Journal of Medical Virology.2019; 91(7): 1232. CrossRef - Cascade Transcription Amplification of RNA Aptamer for Ultrasensitive MicroRNA Detection
Mengxi Zhou, Xucong Teng, Yue Li, Ruijie Deng, Jinghong Li
Analytical Chemistry.2019; 91(8): 5295. CrossRef - Development of loop-mediated isothermal amplification combined with a chromatographic lateral-flow dipstick for rapid detection of Chattonella marina
Yue Qin, Guofu Chen, Chunyun Zhang, Yuanyuan Wang, Jin Zhou
Harmful Algae.2019; 89: 101666. CrossRef - The burden of congenital Chagas disease and implementation of molecular diagnostic tools in Latin America
Albert Picado, Israel Cruz, Maël Redard-Jacot, Alejandro G Schijman, Faustino Torrico, Sergio Sosa-Estani, Zachary Katz, Joseph Mathu Ndung’u
BMJ Global Health.2018; 3(5): e001069. CrossRef - Evaluation of fluorimetry and direct visualization to interpret results of a loop-mediated isothermal amplification kit to detect Leishmania DNA
Ana V. Ibarra-Meneses, Israel Cruz, Carmen Chicharro, Carmen Sánchez, Sylvain Biéler, Tobias Broger, Javier Moreno, Eugenia Carrillo
Parasites & Vectors.2018;[Epub] CrossRef - An Integrated Real‐time Electrochemical LAMP Device for Pathogenic Bacteria Detection in Food
Tsung‐Tao Huang, Shao‐Chung Liu, Chih‐Hung Huang, Chun‐Ju Lin, Sheng‐Tung Huang
Electroanalysis.2018; 30(10): 2397. CrossRef - Fluorescent analysis of bioactive molecules in single cells based on microfluidic chips
Yuanyuan Fan, Defang Dong, Qingling Li, Haibin Si, Haimeng Pei, Lu Li, Bo Tang
Lab on a Chip.2018; 18(8): 1151. CrossRef - Bacterial pathogens were detected from human exhaled breath using a novel protocol
Yunhao Zheng, Haoxuan Chen, Maosheng Yao, Xiaoguang Li
Journal of Aerosol Science.2018; 117: 224. CrossRef - Lateral Flow Loop-Mediated Isothermal Amplification Test with Stem Primers: Detection ofCryptosporidiumSpecies in Kenyan Children Presenting with Diarrhea
Timothy S. Mamba, Cecilia K. Mbae, Johnson Kinyua, Erastus Mulinge, Gitonga Nkanata Mburugu, Zablon K. Njiru
Journal of Tropical Medicine.2018; 2018: 1. CrossRef - Detection of Zika virus using reverse-transcription LAMP coupled with reverse dot blot analysis in saliva
Maite Sabalza, Rubina Yasmin, Cheryl A. Barber, Talita Castro, Daniel Malamud, Beum Jun Kim, Hui Zhu, Richard A. Montagna, William R. Abrams, Ruslan Kalendar
PLOS ONE.2018; 13(2): e0192398. CrossRef - Microbiological Sensing Technologies: A Review
Firouz Abbasian, Ebrahim Ghafar-Zadeh, Sebastian Magierowski
Bioengineering.2018; 5(1): 20. CrossRef - Innovative PCR without DNA extraction for African sickle cell disease diagnosis
L. Detemmerman, S. Olivier, V. Bours, F. Boemer
Hematology.2018; 23(3): 181. CrossRef - Evaluation of point-of-care tests for cutaneous leishmaniasis diagnosis in Kabul, Afghanistan
Martijn M.T. Vink, Sami M. Nahzat, Habiburrahman Rahimi, Cyril Buhler, Bashir A. Ahmadi, Mohammad Nader, Fazal R. Zazai, Abdul S. Yousufzai, Merlin van Loenen, Henk D.F.H. Schallig, Albert Picado, Israel Cruz
EBioMedicine.2018; 37: 453. CrossRef - Field Evaluation of a Loop-Mediated Isothermal Amplification (LAMP) Platform for the Detection of Schistosoma japonicum Infection in Oncomelania hupensis Snails
Zhi-Qiang Qin, Jing Xu, Ting Feng, Shan Lv, Ying-Jun Qian, Li-Juan Zhang, Yin-Long Li, Chao Lv, Robert Bergquist, Shi-Zhu Li, Xiao-Nong Zhou
Tropical Medicine and Infectious Disease.2018; 3(4): 124. CrossRef - A direct isothermal amplification system adapted for rapid SNP genotyping of multifarious sample types
Xiaonan Liu, Chao Zhang, Mengye Zhao, Kewu Liu, Hang Li, Ningning Li, Linlin Gao, Xuemin Yang, Ting Ma, Juanli Zhu, Wenli Hui, Kai Hua, Yali Cui
Biosensors and Bioelectronics.2018; 115: 70. CrossRef - Field and laboratory comparative evaluation of a LAMP assay for the diagnosis of urogenital schistosomiasis in Cubal, Central Angola
Javier Gandasegui, Pedro Fernández‐Soto, Elena Dacal, Esperanza Rodríguez, José María Saugar, Edward Yepes, María Luisa Aznar‐Ruiz‐de‐Alegría, Mateu Espasa, Arlette Ninda, Cristina Bocanegra, Fernando Salvador, Elena Sulleiro, Milagros Moreno, Belén Vicen
Tropical Medicine & International Health.2018; 23(9): 992. CrossRef - Rapid and simple detection of Ureaplasma species from vaginal swab samples using a loop‐mediated isothermal amplification method
Kazumasa Fuwa, Mitsuko Seki, Yoshiyasu Hirata, Itaru Yanagihara, Yukiko Nakura, Chika Takano, Kazumichi Kuroda, Satoshi Hayakawa
American Journal of Reproductive Immunology.2018;[Epub] CrossRef - Direct and Rapid Detection and Quantification of Oenococcus oeni Cells in Wine by Cells-LAMP and Cells-qLAMP
Verónica Soares-Santos, Isabel Pardo, Sergi Ferrer
Frontiers in Microbiology.2018;[Epub] CrossRef - Laboratory challenges in the diagnosis of hepatitis E virus
Duaa W. Al-Sadeq, Amin F. Majdalawieh, Areej G. Mesleh, Omnya M. Abdalla, Gheyath K. Nasrallah
Journal of Medical Microbiology.2018; 67(4): 466. CrossRef - On-chip LAMP-BART reaction for viral DNA real-time bioluminescence detection
M. Mirasoli, F. Bonvicini, N. Lovecchio, G. Petrucci, M. Zangheri, D. Calabria, F. Costantini, A. Roda, G. Gallinella, D. Caputo, G. de Cesare, A. Nascetti
Sensors and Actuators B: Chemical.2018; 262: 1024. CrossRef - OPTIMIZATION OF A METHOD OF ISOTHERMAL AMPLIFICATION (LAMP) FOR DIAGNOSIS OF WHOOPING COUGH
A. S. Pimenova, O. Yu. Borisova, M. S. Petrova, E. V. Vlasov, I. S. Voronina, A. B. Borisova, S. S. Afanasiev, E. E. Donskich, L. I. Kafarskaya, V. A. Aleshkin, A. V. Aleshkin, M. S. Afanasiev, A. V. Karaulov
Journal of microbiology, epidemiology and immunobiology.2018; 95(5): 37. CrossRef - Reduced graphene oxide-polyaniline film as enhanced sensing interface for the detection of loop-mediated-isothermal-amplification products by open circuit potential measurement
Vu Thi Thu, Bui Quang Tien, Dau Thi Ngoc Nga, Ly Cong Thanh, Le Hoang Sinh, Tu Cam Le, Tran Dai Lam
RSC Advances.2018; 8(45): 25361. CrossRef - Loop-mediated isothermal amplification: an effective method for express-diagnostics of cancer
Yu. A. Makarova, A. A. Zotikov, G. A. Belyakova, B. Ya. Alekseev, M. Yu. Shkurnikov
Cancer Urology.2018; 14(2): 88. CrossRef - Microchip device with dry-stored reagents for Loop mediated isothermal amplification
A Tupik, G Rudnitskaya, A Bulyanitsa, T Lukashenko, D Varlamov, A Evstrapov
Journal of Physics: Conference Series.2018; 1124: 031015. CrossRef - Real-time Detection and Monitoring of Loop Mediated Amplification (LAMP) Reaction Using Self-quenching and De-quenching Fluorogenic Probes
Vijay J. Gadkar, David M. Goldfarb, Soren Gantt, Peter A. G. Tilley
Scientific Reports.2018;[Epub] CrossRef - Rapid in vitro detection of CTX-M groups 1, 2, 8, 9 resistance genes by LAMP assays
Odile Lalainasoa Rivoarilala, Benoît Garin, Felamboahangy Andriamahery, Jean Marc Collard, Massimiliano Galdiero
PLOS ONE.2018; 13(7): e0200421. CrossRef - Microfluidic devices for Loop mediated isothermal amplification
A Tupik, Y Posmitnaya, G Rudnitskaya, D Varlamov, A Evstrapov
Journal of Physics: Conference Series.2018; 1135: 012110. CrossRef - Loop-Mediated Isothermal Amplification on Crude DNA as a Point-of-Care Test for the Diagnosis of Mycoplasma-Related Vaginitis During Early Pregnancy
Yichao Wang, Bumei Zhang, Yan Sun, Yunde Liu, Yajun Gu
Laboratory Medicine.2018; 49(1): 59. CrossRef - A Minireview of the Methods for Listeria monocytogenes Detection
Aiping Liu, Li Shen, Zhenghai Zeng, Min Sun, Yuntao Liu, Shuliang Liu, Cheng Li, Xiaohong Wang
Food Analytical Methods.2018; 11(1): 215. CrossRef - Isothermal exponential amplification techniques: From basic principles to applications in electrochemical biosensors
Hongjie Qi, Shuzhen Yue, Sai Bi, Caifeng Ding, Weiling Song
Biosensors and Bioelectronics.2018; 110: 207. CrossRef - Die exponentielle isotherme Amplifikation von Nukleinsäuren und Assays zur Detektion von Proteinen, Zellen, kleinen Molekülen und Enzymaktivitäten: Anwendungen für EXPAR
Michael S. Reid, X. Chris Le, Hongquan Zhang
Angewandte Chemie.2018; 130(37): 12030. CrossRef - Comparative Evaluation of the Loop-Mediated Isothermal Amplification Assay for Detecting Pulmonary Tuberculosis
Chang-Ki Kim, Eun A Cho, Dong Mi Shin, Sung Won Choi, So Youn Shin
Annals of Laboratory Medicine.2018; 38(2): 119. CrossRef - A field survey using LAMP assay for detection of Schistosoma mansoni in a low-transmission area of schistosomiasis in Umbuzeiro, Brazil: Assessment in human and snail samples
Javier Gandasegui, Pedro Fernández-Soto, Antonio Muro, Constança Simões Barbosa, Fabio Lopes de Melo, Rodrigo Loyo, Elainne Christine de Souza Gomes, Justin V. Remais
PLOS Neglected Tropical Diseases.2018; 12(3): e0006314. CrossRef - A rapid and eco-friendly isothermal amplification microdevice for multiplex detection of foodborne pathogens
Thi Ngoc Diep Trinh, Nae Yoon Lee
Lab on a Chip.2018; 18(16): 2369. CrossRef - Laboratory Methods in Molecular Epidemiology: Viral Infections
Ricardo Parreira, Lee W. Riley, Ronald E. Blanton
Microbiology Spectrum.2018;[Epub] CrossRef - Comparison of Different Methods of RNA Preparation from Peripheral Blood for Nucleic Acid Amplification Assay
Dong Eun Lee, Hanna Lee, Seon Duk Lee, Hyung Soo Han, Jae Young Choe, Sora Yun, Hong-Jun Park, Jungbae Park, Jong Kun Kim
Indian Journal of Medical Microbiology.2018; 36(1): 77. CrossRef - Rapid Detection Device for Salmonella typhi in Milk, Juice, Water and Calf Serum
Avinash Kaur, Ritu Das, Mayank Rai Nigam, Ravikrishnan Elangovan, Deepal Pandya, Sandeep Jha, Dinesh Kalyanasundaram
Indian Journal of Microbiology.2018; 58(3): 381. CrossRef - The application of loop-mediated isothermal amplification (LAMP) assays for the rapid diagnosis of food-borne mycotoxigenic fungi
Ludwig Niessen
Current Opinion in Food Science.2018; 23: 11. CrossRef - Validation of SYBR green I based closed tube loop mediated isothermal amplification (LAMP) assay and simplified direct-blood-lysis (DBL)-LAMP assay for diagnosis of visceral leishmaniasis (VL)
Keerti Kaumudee Dixit, Sandeep Verma, Om Prakash Singh, Dharmendra Singh, Akhil Pratap Singh, Ratan Gupta, Narendra Singh Negi, Pradeep Das, Shyam Sundar, Ruchi Singh, Poonam Salotra, Sreenivas Gannavaram
PLOS Neglected Tropical Diseases.2018; 12(11): e0006922. CrossRef - Semiquantitative Nucleic Acid Test with Simultaneous Isotachophoretic Extraction and Amplification
Andrew T. Bender, Mark D. Borysiak, Amanda M. Levenson, Lorraine Lillis, David S. Boyle, Jonathan D. Posner
Analytical Chemistry.2018; 90(12): 7221. CrossRef - Application of the LAMP assay for the detection of the Argentine ant, Linepithema humile (Hymenoptera: Formicidae), from captures of pan traps
Tatsuya Ide, Natsumi Kanzaki, Hayato Masuya, Kimiko Okabe
Applied Entomology and Zoology.2018; 53(2): 275. CrossRef - Lineage specific detection of the scaly form of the pen shell Atrina spp. by a loop-mediated isothermal amplification method
Kazumasa Hashimoto, Katsumasa Yamada, Akira Nagae, Yukihiko Matsuyama
Fisheries Science.2018; 84(5): 837. CrossRef - Diagnosis of amphimeriasis by LAMPhimerus assay in human stool samples long-term storage onto filter paper
William Cevallos, Pedro Fernández-Soto, Manuel Calvopiña, María Buendía-Sánchez, Julio López-Abán, Belén Vicente, Antonio Muro, Ana Paula Arez
PLOS ONE.2018; 13(2): e0192637. CrossRef - Validation of loop‐mediated isothermal amplification for fast and portable sex determination across the phylogeny of birds
A. Centeno‐Cuadros, J. L. Tella, M. Delibes, P. Edelaar, M. Carrete
Molecular Ecology Resources.2018; 18(2): 251. CrossRef - Exponential Isothermal Amplification of Nucleic Acids and Assays for Proteins, Cells, Small Molecules, and Enzyme Activities: An EXPAR Example
Michael S. Reid, X. Chris Le, Hongquan Zhang
Angewandte Chemie International Edition.2018; 57(37): 11856. CrossRef - Loop-mediated isothermal amplification (LAMP) shield for Arduino DNA detection
Aldrik H. Velders, Cor Schoen, Vittorio Saggiomo
BMC Research Notes.2018;[Epub] CrossRef - Aptamer selection and application in multivalent binding-based electrical impedance detection of inactivated H1N1 virus
Chenjun Bai, Zhangwei Lu, Hua Jiang, Zihua Yang, Xuemei Liu, Hongmei Ding, Hui Li, Jie Dong, Aixue Huang, Tao Fang, Yongqiang Jiang, Lingling Zhu, Xinhui Lou, Shaohua Li, Ningsheng Shao
Biosensors and Bioelectronics.2018; 110: 162. CrossRef - HCV Detection, Discrimination, and Genotyping Technologies
Shrikant Dashrath Warkad, Satish Balasaheb Nimse, Keum-Soo Song, Taisun Kim
Sensors.2018; 18(10): 3423. CrossRef - Chromogenic detection of yam mosaic virus by closed-tube reverse transcription loop-mediated isothermal amplification (CT-RT-LAMP)
Chukwuemeka K. Nkere, Joshua O. Oyekanmi, Gonçalo Silva, Moritz Bömer, Gabriel I. Atiri, Joseph Onyeka, Norbert G. Maroya, Susan E. Seal, P. Lava Kumar
Archives of Virology.2018; 163(4): 1057. CrossRef - Sensitive and less invasive confirmatory diagnosis of visceral leishmaniasis in Sudan using loop-mediated isothermal amplification (LAMP)
Maowia Mukhtar, Sababil S. Ali, Salah A. Boshara, Audrey Albertini, Séverine Monnerat, Paul Bessell, Yasuyoshi Mori, Yutaka Kubota, Joseph M. Ndung’u, Israel Cruz, Anne-Laure Bañuls
PLOS Neglected Tropical Diseases.2018; 12(2): e0006264. CrossRef - Community-Acquired Pneumonia in Children: the Challenges of Microbiological Diagnosis
C. M. C. Rodrigues, H. Groves, Colleen Suzanne Kraft
Journal of Clinical Microbiology.2018;[Epub] CrossRef - Évaluation d’une technique LAMP pour le diagnostic de la prédisposition génétique à l’intolérance au lactose
Minh-Toàn Duong, Lise Hebert, Sébastien Courcelle, Franck Ceppa, Hervé Delacour
Revue Francophone des Laboratoires.2018; 2018(504): 20. CrossRef - Loop-mediated isothermal amplification for visual detection of Vibrio parahaemolyticus using gold nanoparticles
Cong Kong, Yuan Wang, Essy Kouadio Fodjo, Guang-xin Yang, Feng Han, Xiao-sheng Shen
Microchimica Acta.2018;[Epub] CrossRef - Loop-mediated isothermal amplification (LAMP): a versatile technique for detection of micro-organisms
Y.-P. Wong, S. Othman, Y.-L. Lau, S. Radu, H.-Y. Chee
Journal of Applied Microbiology.2018; 124(3): 626. CrossRef - Multiplex sample-to-answer detection of bacteria using a pipette-actuated capillary array comb with integrated DNA extraction, isothermal amplification, and smartphone detection
Junhou Hui, Yin Gu, Yuanshou Zhu, Yanjing Chen, Shu-juan Guo, Sheng-ce Tao, Yan Zhang, Peng Liu
Lab on a Chip.2018; 18(18): 2854. CrossRef - EFFICIENCY OF APPLICATION OF ISOTHERMAL AMPLIFICATION AT INSPECTION OF PATIENTS WITH WHOOPING COUGH
A. S. Pimenova, O. Yu. Borisova, M. S. Petrova, I. S. Voronina, A. B. Borisova, O. V. Shamsheva, S. S. Afanasiev, E. V. Vlasov, V. A. Aleshkin
Russian Journal of Infection and Immunity.2018; 8(3): 361. CrossRef - Rapid discriminative detection of dengue viruses via loop mediated isothermal amplification
Jong-Gil Kim, Seung Hoon Baek, Seungrok Kim, Hae In Kim, Seung Woo Lee, Le Minh Tu Phan, Suresh Kumar Kailasa, Tae Jung Park
Talanta.2018; 190: 391. CrossRef - A multiplex microfluidic loop-mediated isothermal amplification array for detection of malaria-related parasites and vectors
Rui Mao, Ge Ge, Zhuo Wang, Rongzhang Hao, Guohao Zhang, Zhenzhou Yang, Bincheng Lin, Yajun Ma, Hongtao Liu, Yuguang Du
Acta Tropica.2018; 178: 86. CrossRef - Detection of HCV genotypes 1b and 2a by a reverse transcription loop‐mediated isothermal amplification assay
Na Zhao, Jinxia Liu, Dianxing Sun
Journal of Medical Virology.2017; 89(6): 1048. CrossRef - A smartphone-based diagnostic platform for rapid detection of Zika, chikungunya, and dengue viruses
Aashish Priye, Sara W. Bird, Yooli K. Light, Cameron S. Ball, Oscar A. Negrete, Robert J. Meagher
Scientific Reports.2017;[Epub] CrossRef - Microbial genomics and antimicrobial susceptibility testing
W. Michael Dunne Jr, Magali Jaillard, Olivier Rochas, Alex Van Belkum
Expert Review of Molecular Diagnostics.2017; 17(3): 257. CrossRef - Rapid visual identification of bovine meat by loop mediated isothermal amplification combined with immunochromatographic strip
Yong-Jin Li, Jin-Yu Fan
BioChip Journal.2017; 11(1): 8. CrossRef - Development of a Quantitative Loop-Mediated Isothermal Amplification Assay for the Rapid Detection of Novel Goose Parvovirus
Jing Yang, Hao Chen, Zhenzhong Wang, Xianglong Yu, Xiaoyu Niu, Yi Tang, Youxiang Diao
Frontiers in Microbiology.2017;[Epub] CrossRef - LAMPhimerus: A novel LAMP assay for detecting Amphimerus sp. DNA in human stool samples
William Cevallos, Pedro Fernández-Soto, Manuel Calvopiña, Cristina Fontecha-Cuenca, Hiromu Sugiyama, Megumi Sato, Julio López Abán, Belén Vicente, Antonio Muro, David Blair
PLOS Neglected Tropical Diseases.2017; 11(6): e0005672. CrossRef - Stem loop-mediated isothermal amplification test: comparative analysis with classical LAMP and PCR in detection of Entamoeba histolytica in Kenya
Fridah Mwendwa, Cecilia K. Mbae, Johnson Kinyua, Erastus Mulinge, Gitonga Nkanata Mburugu, Zablon K. Njiru
BMC Research Notes.2017;[Epub] CrossRef - Rapid pathogen-specific phenotypic antibiotic susceptibility testing using digital LAMP quantification in clinical samples
Nathan G. Schoepp, Travis S. Schlappi, Matthew S. Curtis, Slava S. Butkovich, Shelley Miller, Romney M. Humphries, Rustem F. Ismagilov
Science Translational Medicine.2017;[Epub] CrossRef - Nuclease-free target recycling signal amplification for ultrasensitive multiplexing DNA biosensing
Zhihan Zhao, Shixing Chen, Jianbang Wang, Jing Su, Jiaqiang Xu, Sanjay Mathur, Chunhai Fan, Shiping Song
Biosensors and Bioelectronics.2017; 94: 605. CrossRef - Identification of Methicillin-Resistant Staphylococcus aureus (MRSA) Using Simultaneous Detection of mecA, nuc, and femB by Loop-Mediated Isothermal Amplification (LAMP)
Changguo Chen, Qiangyuan Zhao, Jianwei Guo, Yanjun Li, Qiuyuan Chen
Current Microbiology.2017; 74(8): 965. CrossRef - Paper microchip with a graphene-modified silver nano-composite electrode for electrical sensing of microbial pathogens
Mohammadali Safavieh, Vivasvat Kaul, Sultan Khetani, Anupriya Singh, Karan Dhingra, Manoj Kumar Kanakasabapathy, Mohamed Shehata Draz, Adnan Memic, Daniel R. Kuritzkes, Hadi Shafiee
Nanoscale.2017; 9(5): 1852. CrossRef - Loop‐mediated isothermal amplification (LAMP) as an alternative to PCR: A rapid on‐site detection of gene doping
Olivier Salamin, Tiia Kuuranne, Martial Saugy, Nicolas Leuenberger
Drug Testing and Analysis.2017; 9(11-12): 1731. CrossRef - A loop-mediated, isothermal amplification-based method for visual detection of Vibrio parahaemolyticus within only 1 h, from shrimp sampling to results
Rui Wang, Xingning Xiao, Yuan Chen, Jun Wu, Wenjuan Qian, Liu Wang, Yuan Liu, Feng Ji, Jian Wu
Analytical Methods.2017; 9(11): 1695. CrossRef - Hands-free smartphone-based diagnostics for simultaneous detection of Zika, Chikungunya, and Dengue at point-of-care
A. Ganguli, A. Ornob, H. Yu, G. L. Damhorst, W. Chen, F. Sun, A. Bhuiya, B. T. Cunningham, R. Bashir
Biomedical Microdevices.2017;[Epub] CrossRef - Establishment and Evaluation of a Loop-Mediated Isothermal Amplification Assay for Detection of Raccoon Dog in Meat Mixtures
Jinhua Liu, Yanyu Shi, Siying Teng, Lianpeng Wu, Xinmin Zhang
Journal of Food Quality.2017; 2017: 1. CrossRef - Development of a recombinase polymerase amplification lateral flow dipstick (RPA-LFD) for the field diagnosis of caprine arthritis-encephalitis virus (CAEV) infection
Po-An Tu, Jia-Shian Shiu, Shu-Hwae Lee, Victor Fei Pang, De-Chi Wang, Pei-Hwa Wang
Journal of Virological Methods.2017; 243: 98. CrossRef - Loop-mediated isothermal amplification (LAMP) for detection of the red ring nematode, Bursaphelenchus cocophilus
Tatsuya Ide, Natsumi Kanzaki, Pedro Pablo Parra Giraldo, Robin M. Giblin-Davis
Nematology.2017; 19(5): 559. CrossRef - A smart sealed nucleic acid biosensor based on endogenous reference gene detection to screen and identify mammals on site
Yuancong Xu, Wenjin Xiang, Qin Wang, Nan Cheng, Li Zhang, Kunlun Huang, Wentao Xu
Scientific Reports.2017;[Epub] CrossRef - Development of a loop-mediated isothermal amplification technique and comparison with quantitative real-time PCR for the rapid visual detection of canine neosporosis
Aongart Mahittikorn, Nipa Thammasonthijarern, Amonrattana Roobthaisong, Ruenruetai Udonsom, Supaluk Popruk, Sukhontha Siri, Hirotake Mori, Yaowalark Sukthana
Parasites & Vectors.2017;[Epub] CrossRef - Analytical sensitivity and specificity of a loop-mediated isothermal amplification (LAMP) kit prototype for detection of Trypanosoma cruzi DNA in human blood samples
Susana A. Besuschio, Mónica Llano Murcia, Alejandro F. Benatar, Severine Monnerat, Israel Cruz, Albert Picado, María de los Ángeles Curto, Yutaka Kubota, Diana P. Wehrendt, Paula Pavia, Yasuyoshi Mori, Concepción Puerta, Joseph M. Ndung'u, Alejandro G. Sc
PLOS Neglected Tropical Diseases.2017; 11(7): e0005779. CrossRef - The development of loop-mediated isothermal amplification (LAMP) assays for the rapid authentication of five forbidden vegetables in strict vegetarian diets
Meng-Shiou Lee, Ting-Ying Su, Yi-Yang Lien, Shyang-Chwen Sheu
Scientific Reports.2017;[Epub] CrossRef - Development and evaluation of rapid novel isothermal amplification assays for important veterinary pathogens:Chlamydia psittaciandChlamydia pecorum
Martina Jelocnik, Md. Mominul Islam, Danielle Madden, Cheryl Jenkins, James Branley, Scott Carver, Adam Polkinghorne
PeerJ.2017; 5: e3799. CrossRef - Sequence-specific validation of LAMP amplicons in real-time optomagnetic detection of Dengue serotype 2 synthetic DNA
Gabriel Antonio S. Minero, Catarina Nogueira, Giovanni Rizzi, Bo Tian, Jeppe Fock, Marco Donolato, Mattias Strömberg, Mikkel F. Hansen
The Analyst.2017; 142(18): 3441. CrossRef - Detection of schistosomiasis applicable for primary health care facilities in endemic regions of Africa
Alžbeta Kaiglová, Pavol Beňo, Mwatasa J. S. Changoma
Biologia.2017; 72(10): 1113. CrossRef - A Digital Microfluidics Platform for Loop-Mediated Isothermal Amplification Detection
Beatriz Coelho, Bruno Veigas, Hugo Águas, Elvira Fortunato, Rodrigo Martins, Pedro Baptista, Rui Igreja
Sensors.2017; 17(11): 2616. CrossRef - Molecular detection of genotype II grass carp reovirus based on nucleic acid sequence-based amplification combined with enzyme-linked immunosorbent assay (NASBA-ELISA)
Weiwei Zeng, Wei Yao, Yingying Wang, Yingying Li, Sven M. Bermann, Yan Ren, Cunbin Shi, Xinjian Song, Qiwen Huang, Shuchen Zheng, Qing Wang
Journal of Virological Methods.2017; 243: 92. CrossRef - Detection assay for HPV16 and HPV18 by loop-mediated isothermal amplification with lateral flow dipstick tests
Ratchanida Kumvongpin, Patcharee Jearanaikoon, Chotchana Wilailuckana, Nattaya Sae-Ung, Prinya Prasongdee, Sakda Daduang, Metee Wongsena, Patcharee Boonsiri, Wansika Kiatpathomchai, Sukumarn Sanersak Swangvaree, Alisa Sandee, Jureerut Daduang
Molecular Medicine Reports.2017; 15(5): 3203. CrossRef - Colorimetric tests for diagnosis of filarial infection and vector surveillance using non-instrumented nucleic acid loop-mediated isothermal amplification (NINA-LAMP)
Catherine B. Poole, Zhiru Li, Andy Alhassan, Dylan Guelig, Steven Diesburg, Nathan A. Tanner, Yinhua Zhang, Thomas C. Evans, Paul LaBarre, Samuel Wanji, Robert A. Burton, Clotilde K. S. Carlow, Matty Knight
PLOS ONE.2017; 12(2): e0169011. CrossRef - Mie Scatter and Interfacial Tension Based Real‐Time Quantification of Colloidal Emulsion Nucleic Acid Amplification
Ariana M. Nicolini, Tyler D. Toth, Samuel Y. Kim, M. Alejandra Mandel, David W. Galbraith, Jeong‐Yeol Yoon
Advanced Biosystems.2017;[Epub] CrossRef - Development and evaluation of a rapid molecular diagnostic test for Zika virus infection by reverse transcription loop-mediated isothermal amplification
Yohei Kurosaki, Danyelly Bruneska Gondim Martins, Mayuko Kimura, Andriu dos Santos Catena, Maria Amélia Carlos Souto Maior Borba, Sandra da Silva Mattos, Haruka Abe, Rokusuke Yoshikawa, José Luiz de Lima Filho, Jiro Yasuda
Scientific Reports.2017;[Epub] CrossRef - Effects of supplement additives on anaerobic biogas production
Minsoo Kim, Dan Li, Okkyoung Choi, Byoung-In Sang, Pen Chi Chiang, Hyunook Kim
Korean Journal of Chemical Engineering.2017; 34(10): 2678. CrossRef - Rapid on-site evaluation of the development of resistance to quinone outside inhibitors in Botrytis cinerea
X. R. Hu, D. J. Dai, H. D. Wang, C. Q. Zhang
Scientific Reports.2017;[Epub] CrossRef - DNA amplification in the field: move over PCR, here comes LAMP
Patricia L. M. Lee
Molecular Ecology Resources.2017; 17(2): 138. CrossRef - Rapid and Sensitive Detection of sFAT-1 Transgenic Pigs by Visual Loop-Mediated Isothermal Amplification
Chenyu Tao, Yalan Yang, Xunbi Li, Xinmin Zheng, Hongyan Ren, Kui Li, Rong Zhou
Applied Biochemistry and Biotechnology.2016; 179(6): 938. CrossRef - Peste des petits ruminants diagnosis and diagnostic tools at a glance: perspectives on global control and eradication
Ramasamy Santhamani, Rabindra Prasad Singh, Felix Njeumi
Archives of Virology.2016; 161(11): 2953. CrossRef - Molecular Identification of an Invasive Wood-Boring InsectLyctus brunneus(Coleoptera: Bostrichidae: Lyctinae) Using Frass by Loop-Mediated Isothermal Amplification and Nested PCR Assays
Tatsuya Ide, Natsumi Kanzaki, Wakako Ohmura, Kimiko Okabe
Journal of Economic Entomology.2016; 109(3): 1410. CrossRef - Porcine epidemic diarrhea virus: An overview of current virological and serological diagnostic methods
D.G. Diel, S. Lawson, F. Okda, A. Singrey, T. Clement, M.H.V. Fernandes, J. Christopher-Hennings, E.A. Nelson
Virus Research.2016; 226: 60. CrossRef - Sequence selective naked-eye detection of DNA harnessing extension of oligonucleotide-modified nucleotides
Daniela Verga, Moritz Welter, Andreas Marx
Bioorganic & Medicinal Chemistry Letters.2016; 26(3): 841. CrossRef - A field-deployable mobile molecular diagnostic system for malaria at the point of need
Gihoon Choi, Daniel Song, Sony Shrestha, Jun Miao, Liwang Cui, Weihua Guan
Lab on a Chip.2016; 16(22): 4341. CrossRef - What’s New in Point-of-Care Testing?
Rachel D. Le, Ida Bixho, Stacy E. F. Melanson
Point of Care: The Journal of Near-Patient Testing & Technology.2016; 15(4): 158. CrossRef - Strong-LAMP: A LAMP Assay for Strongyloides spp. Detection in Stool and Urine Samples. Towards the Diagnosis of Human Strongyloidiasis Starting from a Rodent Model
Pedro Fernández-Soto, Alicia Sánchez-Hernández, Javier Gandasegui, Cristina Bajo Santos, Julio López-Abán, José María Saugar, Esperanza Rodríguez, Belén Vicente, Antonio Muro, James S McCarthy
PLOS Neglected Tropical Diseases.2016; 10(7): e0004836. CrossRef - Comparison of a new visual isothermal nucleic acid amplification test with PCR and skin snip analysis for diagnosis of onchocerciasis in humans
Andy Alhassan, Mike Y. Osei-Atweneboana, Kwadwo F. Kyeremeh, Catherine B. Poole, Zhiru Li, Edward Tettevi, Nathan A. Tanner, Clotilde K.S. Carlow
Molecular and Biochemical Parasitology.2016; 210(1-2): 10. CrossRef - Rapid and specific detection of Tilletia indica using loop-mediated isothermal DNA amplification
Y. Gao, M. K. Tan, Y. G. Zhu
Australasian Plant Pathology.2016; 45(4): 361. CrossRef - Establishment and application of a real-time loop-mediated isothermal amplification system for the detection of CYP2C19 polymorphisms
Chao Zhang, Yao Yao, Juan-Li Zhu, Si-Nong Zhang, Shan-Shan Zhang, Hua Wei, Wen-Li Hui, Ya-Li Cui
Scientific Reports.2016;[Epub] CrossRef - A Novel Loop-Mediated Isothermal Amplification Assay for Serogroup Identification of Neisseria meningitidis in Cerebrospinal Fluid
DoKyung Lee, Eun Jin Kim, Paul E. Kilgore, Hideyuki Takahashi, Makoto Ohnishi, Jun Tomono, Shigehiko Miyamoto, Daisuke Omagari, Dong Wook Kim, Mitsuko Seki
Frontiers in Microbiology.2016;[Epub] CrossRef - Molecular Identification of the Western Drywood Termite (Isoptera: Kalotermitidae) by Loop-Mediated Isothermal Amplification of DNA from Fecal Pellets
Tatsuya Ide, Natsumi Kanzaki, Wakako Ohmura, Kimiko Okabe
Journal of Economic Entomology.2016; 109(5): 2234. CrossRef - An Innovative Method for Rapid Identification and Detection of Vibrio alginolyticus in Different Infection Models
Kaifei Fu, Jun Li, Yuxiao Wang, Jianfei Liu, He Yan, Lei Shi, Lijun Zhou
Frontiers in Microbiology.2016;[Epub] CrossRef - Rapid authentication of the precious herb saffron by loop-mediated isothermal amplification (LAMP) based on internal transcribed spacer 2 (ITS2) sequence
Mingming Zhao, Yuhua Shi, Lan Wu, Licheng Guo, Wei Liu, Chao Xiong, Song Yan, Wei Sun, Shilin Chen
Scientific Reports.2016;[Epub] CrossRef - An integrated lateral flow assay for effective DNA amplification and detection at the point of care
Jane Ru Choi, Jie Hu, Yan Gong, Shangsheng Feng, Wan Abu Bakar Wan Abas, Belinda Pingguan-Murphy, Feng Xu
The Analyst.2016; 141(10): 2930. CrossRef - Direct loop mediated isothermal amplification on filters for quantification of Dehalobacter in groundwater
Robert D Stedtfeld, Tiffany M Stedtfeld, Farag Samhan, Yogendra H Kanitkar, Paul B. Hatzinger, Alison M Cupples, Syed A Hashsham
Journal of Microbiological Methods.2016; 131: 61. CrossRef - Centrifugal loop-mediated isothermal amplification microdevice for rapid, multiplex and colorimetric foodborne pathogen detection
Seung Jun Oh, Byung Hyun Park, Jae Hwan Jung, Goro Choi, Doh C. Lee, Do Hyun Kim, Tae Seok Seo
Biosensors and Bioelectronics.2016; 75: 293. CrossRef - Laboratory Diagnosis of Central Nervous System Infection
Taojun He, Samuel Kaplan, Mini Kamboj, Yi-Wei Tang
Current Infectious Disease Reports.2016;[Epub] CrossRef - Emerging Loop-Mediated Isothermal Amplification-Based Microchip and Microdevice Technologies for Nucleic Acid Detection
Mohammadali Safavieh, Manoj K. Kanakasabapathy, Farhang Tarlan, Minhaz U. Ahmed, Mohammed Zourob, Waseem Asghar, Hadi Shafiee
ACS Biomaterials Science & Engineering.2016; 2(3): 278. CrossRef - An integrated paper-based sample-to-answer biosensor for nucleic acid testing at the point of care
Jane Ru Choi, Jie Hu, Ruihua Tang, Yan Gong, Shangsheng Feng, Hui Ren, Ting Wen, XiuJun Li, Wan Abu Bakar Wan Abas, Belinda Pingguan-Murphy, Feng Xu
Lab on a Chip.2016; 16(3): 611. CrossRef - Biompha-LAMP: A New Rapid Loop-Mediated Isothermal Amplification Assay for Detecting Schistosoma mansoni in Biomphalaria glabrata Snail Host
Javier Gandasegui, Pedro Fernández-Soto, Juan Hernández-Goenaga, Julio López-Abán, Belén Vicente, Antonio Muro, Matty Knight
PLOS Neglected Tropical Diseases.2016; 10(12): e0005225. CrossRef - Detection of Bar Transgenic Sugarcane with a Rapid and Visual Loop-Mediated Isothermal Amplification Assay
Dinggang Zhou, Chunfeng Wang, Zhu Li, Yun Chen, Shiwu Gao, Jinlong Guo, Wenying Lu, Yachun Su, Liping Xu, Youxiong Que
Frontiers in Plant Science.2016;[Epub] CrossRef - A novel microfluidic device that integrates nucleic acid extraction, amplification, and detection to identify an EGFR mutation in lung cancer tissues
Yuanbin Liu, Yang Zhao, Yongxin Qin, Xiaohui Du, Qi Wang, Jianxin Lyu
RSC Advances.2016; 6(16): 13399. CrossRef - High sensitivity, loop-mediated isothermal amplification combined with colorimetric gold-nanoparticle probes for visual detection of high risk human papillomavirus genotypes 16 and 18
Ratchanida Kumvongpin, Patcharee Jearanaikool, Chotechana Wilailuckana, Nattaya Sae-ung, Prinya Prasongdee, Sakda Daduang, Metee Wongsena, Patcharee Boonsiri, Wansika Kiatpathomchai, Sukumarn Sanersak Swangvaree, Alisa Sandee, Jureerut Daduang
Journal of Virological Methods.2016; 234: 90. CrossRef - An isothermal DNA amplification method for detection of Onchocerca volvulus infection in skin biopsies
Ole Lagatie, Michelle Merino, Linda Batsa Debrah, Alexander Y. Debrah, Lieven J. Stuyver
Parasites & Vectors.2016;[Epub] CrossRef - An Advanced Visual Qualitative and EVA Green‐Based Quantitative Isothermal Amplification Method to Detect Listeria Monocytogenes
Nan Cheng, Yuancong Xu, Xinghua Yan, Ying Shang, Pengyu Zhu, Wenying Tian, Zhihong Liang, Wentao Xu
Journal of Food Safety.2016; 36(2): 237. CrossRef - A Loop-Mediated Isothermal Amplification Assay and Sample Preparation Procedure for Sensitive Detection of Xanthomonas fragariae in Strawberry
Hehe Wang, William W. Turechek, Tzong-Yueh Chen
PLOS ONE.2016; 11(1): e0147122. CrossRef - Laboratory Diagnosis of Pertussis
Anneke van der Zee, Joop F. P. Schellekens, Frits R. Mooi
Clinical Microbiology Reviews.2015; 28(4): 1005. CrossRef - Isothermal Amplification of Nucleic Acids
Yongxi Zhao, Feng Chen, Qian Li, Lihua Wang, Chunhai Fan
Chemical Reviews.2015; 115(22): 12491. CrossRef - Adsorption and isolation of nucleic acids on cellulose magnetic beads using a three-dimensional printed microfluidic chip
Lei Zhang, Rachel N. Deraney, Anubhav Tripathi
Biomicrofluidics.2015;[Epub] CrossRef - The Novel Multiple Inner Primers-Loop-Mediated Isothermal Amplification (MIP-LAMP) for Rapid Detection and Differentiation of Listeria monocytogenes
Yi Wang, Yan Wang, Aijing Ma, Dongxun Li, Lijuan Luo, Dongxin Liu, Shoukui Hu, Dong Jin, Kai Liu, Changyun Ye
Molecules.2015; 20(12): 21515. CrossRef - Development of reverse transcription loop mediated isothermal amplification assay for rapid detection of bluetongue viruses
Sreekala S. Mohandas, Dhanavelu Muthuchelvan, Awadh Bihari Pandey, Sanchay Kumar Biswas, Karam Chand, Gnanavel Venkatesan, Dheeraj Choudhary, Muthannan Andavar Ramakrishnan, Bimalendu Mondal
Journal of Virological Methods.2015; 222: 103. CrossRef - The Rapid-Heat LAMPellet Method: A Potential Diagnostic Method for Human Urogenital Schistosomiasis
Javier Gandasegui, Pedro Fernández-Soto, Cristina Carranza-Rodríguez, José Luis Pérez-Arellano, Belén Vicente, Julio López-Abán, Antonio Muro, Jeffrey Michael Bethony
PLOS Neglected Tropical Diseases.2015; 9(7): e0003963. CrossRef - Expanding the MDx toolbox for filarial diagnosis and surveillance
Andy Alhassan, Zhiru Li, Catherine B. Poole, Clotilde K.S. Carlow
Trends in Parasitology.2015; 31(8): 391. CrossRef - Detection of Mycobacterium tuberculosis complex in sputum specimens using a loop-mediated isothermal amplification assay in Korea
Se Hoon Moon, Eun Jin Kim, Jun Tomono, Shigehiko Miyamoto, Satoshi Mitarai, Dong Wook Kim, Mitsuko Seki
Journal of Medical Microbiology
.2015; 64(11): 1335. CrossRef - Genome Filtering for New DNA Biomarkers of Loa loa Infection Suitable for Loop-Mediated Isothermal Amplification
Catherine B. Poole, Laurence Ettwiller, Nathan A. Tanner, Thomas C. Evans, Samuel Wanji, Clotilde K. S. Carlow, Matty Knight
PLOS ONE.2015; 10(9): e0139286. CrossRef
Research Support, Non-U.S. Gov't
- Bacterial Endophyte Sphingomonas sp. LK11 Produces Gibberellins and IAA and Promotes Tomato Plant Growth
-
Abdul Latif Khan , Muhammad Waqas , Sang-Mo Kang , Ahmed Al-Harrasi , Javid Hussain , Ahmed Al-Rawahi , Salima Al-Khiziri , Ihsan Ullah , Liaqat Ali , Hee-Young Jung , In-Jung Lee
-
J. Microbiol. 2014;52(8):689-695. Published online July 4, 2014
-
DOI: https://doi.org/10.1007/s12275-014-4002-7
-
-
46
View
-
0
Download
-
297
Crossref
-
Abstract
-
Plant growth promoting endophytic bacteria have been identified as potential growth regulators of crops. Endophytic bacterium, Sphingomonas sp. LK11, was isolated from the leaves of Tephrosia apollinea. The pure culture of Sphingomonas sp. LK11 was subjected to advance chromatographic and spectroscopic techniques to extract and isolate gibberellins (GAs). Deuterated standards of [17, 17-2H2]-GA4,
[17, 17-2H2]-GA9 and [17, 17-2H2]-GA20 were used to quantify the bacterial GAs. The analysis of the culture broth of Sphingomonas sp. LK11 revealed the existence of physiologically active gibberellins (GA4: 2.97 ± 0.11 ng/ml) and inactive GA9 (0.98 ± 0.15 ng/ml) and GA20 (2.41 ± 0.23). The endophyte also produced indole acetic acid (11.23 ± 0.93 μM/ml). Tomato plants inoculated with endophytic Sphingomonas sp. LK11 showed significantly increased growth attributes
(shoot length, chlorophyll contents, shoot, and root dry weights) compared to the control. This indicated that such phyto-hormones-producing strains could help in increasing crop growth.
-
Citations
Citations to this article as recorded by

- Biochar-based fertilizer enhanced tobacco yield and quality by improving soil quality and soil microbial community
Shen Yan, Peng Wang, Xianjie Cai, Chuliang Wang, Lukas Van Zwieten, Hailong Wang, Quanyu Yin, Guoshun Liu, Tianbao Ren
Environmental Technology & Innovation.2025; 37: 103964. CrossRef - Insect residual streams supplement improves chili pepper growth: Insights into the role of rhizosphere soil microbiome and metabolome
Hanghai Zhou, Xusong Zheng, Zhigang Zhu, Qi Shen, Chenghu Yang, Lijia Jiang, Hua Li, Yuxue Liu, Xiaohong Yao, Hong Sun, Xin Wang, Chunfang Zhang, Yifei Wu, Jiangwu Tang
Applied Soil Ecology.2025; 206: 105838. CrossRef - Combined metagenomics and metabolomic analysis of microbial community structure and metabolic function in continuous soybean cropping soils of Songnen Plain, China
Letian Xu, Shun Jin, Yue Su, Xiaochen Lyu, Shuangshuang Yan, Chang Wang, Liang Cao, Chao Yan, Chunmei Ma
Chemical and Biological Technologies in Agriculture.2024;[Epub] CrossRef - Effects of the decomposition agent application on the physicochemical properties and microbial community structure of wheat straw-returning soil
Jiaxuan Han, Xinyu Song, Haiyan Fu, Chunguang Liu, Fengshan Yang
Environmental Technology & Innovation.2024; 35: 103668. CrossRef - Divergence and convergence in epiphytic and endophytic phyllosphere bacterial communities of rice landraces
Pratibha Sanjenbam, Deepa Agashe, Maria L. Marco
mSphere.2024;[Epub] CrossRef - Silicon: A valuable soil element for improving plant growth and CO2 sequestration
Abdul Latif Khan
Journal of Advanced Research.2024;[Epub] CrossRef - Response of Plant Endophyte Communities to Heavy Metal Stress and Plant Growth Promotion by the Endophyte Serratia marcescens (Strain JG1)
Jiayi Liu, Chao Liu, Jiaxin Zheng, Xiaoxia Zhang, Kang Zheng, Jiayao Zhuang
Plants.2024; 13(19): 2755. CrossRef - UV-C Exposure Enhanced the Cd2+ Adsorption Capability of the Radiation-Resistant Strain Sphingomonas sp. M1-B02
Yunshi Li, Haoyuan Niu, Shuang Li, Ming Yue, Gaosen Zhang
Microorganisms.2024; 12(12): 2620. CrossRef - The plant endomicrobiome: Structure and strategies to produce stress resilient future crop
Shobhit Raj Vimal, Jay Shankar Singh, Ashwani Kumar, Sheo Mohan Prasad
Current Research in Microbial Sciences.2024; 6: 100236. CrossRef - Amorphous silica fertilization ameliorated soil properties and promoted putative soil beneficial microbial taxa in a wheat field under drought
Simon Lewin, Joerg Schaller, Steffen Kolb, Davide Francioli
Applied Soil Ecology.2024; 196: 105286. CrossRef - Alleviation of Drought Stress by Plant Growth-Promoting Rhizobacteria (PGPR) in Crop Plants: A Review
Khyati Harkhani, Anish Kumar Sharma
Communications in Soil Science and Plant Analysis.2024; 55(5): 735. CrossRef - Enhancing rice growth and yield with weed endophytic bacteria Alcaligenes faecalis and Metabacillus indicus under reduced chemical fertilization
Kaniz Fatema, Nur Uddin Mahmud, Dipali Rani Gupta, Md. Nurealam Siddiqui, Tahsin Islam Sakif, Aniruddha Sarker, Andrew G. Sharpe, Tofazzal Islam, Sofia Isabel Almeida Pereira
PLOS ONE.2024; 19(5): e0296547. CrossRef - Morphological, Metabolomic and Genomic Evidences on Drought Stress Protective Functioning of the Endophyte Bacillus safensis Ni7
Silju Juby, P. Soumya, K. Jayachandran, E. K. Radhakrishnan
Current Microbiology.2024;[Epub] CrossRef - Inoculation with PGPR co-fermented broths promotes growth, yields, and quality of pepper by increasing soil nutrients and changing soil bacterial community
Yujie Han, Lei Tian, Yu Luo, Lizhen Han
Journal of Applied Microbiology.2024;[Epub] CrossRef - Genomic Insights into Combating Anthracnose with an Endophytic Bacillus amyloliquefaciens Strain
Haiyan Zhang, Jie Zhang, Yao Tong, Zhiyuan Luan, Jiexi Hou, Fenggang Luan
Plant Disease.2024; 108(7): 1976. CrossRef - Effect of macrophyte biomass-based vermicompost and vermicompost tea on plant growth, productivity, and biocontrol of Fusarium wilt disease in tomato
Ali Mohd Yatoo, Md Niamat Ali, Zahoor Ahmad Baba, Abdullah S. Alsohim, M. Muthukumaran, R.Z. Sayyed
Biocatalysis and Agricultural Biotechnology.2024; 60: 103320. CrossRef - The seeds of invasion: a comparison of endophytic seed bacteria of Acacia longifolia between its native and invasive ranges
Mónica Condessa, Joana G. Jesus, Cristina Máguas, Johannes J. Le Roux, Helena Trindade
Symbiosis.2024; 93(1): 29. CrossRef - Effect of Organic and Chemical Fertilizer on the Diversity of Rhizosphere and Leaf Microbial Composition in Sunflower Plant
Babitha Joseph, Subramanian Babu
Current Microbiology.2024;[Epub] CrossRef - Invisible Inhabitants of Plants and a Sustainable Planet: Diversity of Bacterial Endophytes and their Potential in Sustainable Agriculture
Masrure Alam, Baishali Pandit, Abdul Moin, Umaimah Nuzhat Iqbal
Indian Journal of Microbiology.2024; 64(2): 343. CrossRef - Dynamic microbial regulation of triiron tetrairon phosphate nanomaterials in the tomato rhizosphere
Liya Jiao, Le Yue, Xiehui Le, Xuesong Cao, Feiran Chen, Chuanxi Wang, Xiaoli Zhang, Hua Zou, Zhenyu Wang
Environmental Science: Nano.2024; 11(3): 1157. CrossRef - Shifts in Structure and Assembly Processes of Root Endophytic Community Caused by Climate Warming and Precipitation Increase in Alpine Grassland
Xiaoting Wei, Bing Han, Jinxin Zhang, Xinqing Shao
Microorganisms.2024; 12(9): 1780. CrossRef - Bacillus velezensis LY7 promotes pepper growth and induces resistance to Colletotrichum scovillei
Xiaolu Zou, Junqi Ning, Xiaojun Zhao, Hong Lv, Nan Qin, Hui Yin, Lu Ren
Biological Control.2024; 192: 105480. CrossRef - Rhizobacterial volatile organic compounds: Implications for agricultural ecosystems' nutrient cycling and soil health
Faryal Babar Baloch, Nan Zeng, Haiyang Gong, Zhiyong Zhang, Ning Zhang, Sadia Babar Baloch, Shahzaib Ali, Bingxue Li
Heliyon.2024; 10(23): e40522. CrossRef - Continuous cropping of potato changed the metabolic pathway of root exudates to drive rhizosphere microflora
Yanhong Xing, Pingliang Zhang, Wenming Zhang, Chenxu Yu, Zhuzhu Luo
Frontiers in Microbiology.2024;[Epub] CrossRef - Combined application of melatonin and Bacillus sp. strain IPR-4 ameliorates drought stress tolerance via hormonal, antioxidant, and physiomolecular signaling in soybean
Odongkara Peter, Muhammad Imran, Shifa Shaffique, Sang-Mo Kang, Nkulu Kabange Rolly, Chebitok Felistus, Saqib Bilal, Zhao Dan-Dan, Md. Injamum-Ul-Hoque, Eun-Hae Kwon, Mohammad Nazree Mong, Ho-Jun Gam, Won-Chan- Kim, In-Jung Lee
Frontiers in Plant Science.2024;[Epub] CrossRef - Microalgal bioinoculants for sustainable agriculture and their interactions with soil biotic and abiotic components: A review
Shisy JOSE, Nirmal RENUKA, Sachitra Kumar RATHA, Sheena KUMARI, Faizal BUX
Pedosphere.2024; 34(2): 297. CrossRef - Plant endophytes: unveiling hidden applications toward agro-environment sustainability
Rajeshwari Negi, Babita Sharma, Sanjeev Kumar, Kundan Kumar Chaubey, Tanvir Kaur, Rubee Devi, Ashok Yadav, Divjot Kour, Ajar Nath Yadav
Folia Microbiologica.2024; 69(1): 181. CrossRef - Multiple Omics investigation into the regulatory mechanisms of tobacco growth and quality by transplanting period
Guangwei Sun, Yang Liu, Wei Nie, Yuhai Du, Jingguo Sun, Zhenguo Chen, Liguang Chai, Daisong Liu, Zongpeng Zhao, Aizhong Deng, Qiang Zhang, Chuandong Jiang
Industrial Crops and Products.2024; 217: 118846. CrossRef - Changes in Endophyte Communities across the Different Plant Compartments in Response to the Rice Blast Infection
Mehwish Roy, Sravanthi Goud Burragoni, Junhyun Jeon
The Plant Pathology Journal.2024; 40(3): 299. CrossRef - Potential of the quorum‐quenching and plant‐growth promoting halotolerant Bacillus toyonensisAA1EC1 as biocontrol agent
Amalia Roca, Mónica Cabeo, Carlos Enguidanos, Fernando Martínez‐Checa, Inmaculada Sampedro, Inmaculada Llamas
Microbial Biotechnology.2024;[Epub] CrossRef - The beneficial endophytic microbes enhanced tobacco defense system to resist bacterial wilt disease
Jiemeng Tao, Mengli Gu, Shizhou Yu, Jingjing Shi, Lingtong Cheng, Jingjing Jin, Peng Lu, Jianfeng Zhang, He Li, Peijian Cao
Chemical and Biological Technologies in Agriculture.2024;[Epub] CrossRef - Influence of biochar on the arsenic phytoextraction potential of Pteris vittata in soils from an abandoned arsenic mining site
Guanghui Guo, Shiqi Chen, Degang Zhang, Jing Wang, Mei Lei, Tienan Ju, Heng Wei
Chemosphere.2024; 352: 141389. CrossRef - Active microbial population dynamics and life strategies drive the enhanced carbon use efficiency in high-organic matter soils
Qicheng Xu, Ling Li, Junjie Guo, Hanyue Guo, Manqiang Liu, Shiwei Guo, Yakov Kuzyakov, Ning Ling, Qirong Shen, Jennifer B. H. Martiny, Bruce A. Hungate
mBio.2024;[Epub] CrossRef - Endophytic Microorganisms in Tomato Roots, Changes in the Structure and Function of the Community at Different Growing Stages
Yufei Wei, Siyu Chen, Xinyan Zhou, Diancao Ding, Jingjing Song, Shangdong Yang
Microorganisms.2024; 12(6): 1251. CrossRef - Impacts of nano-acetamiprid pesticide on faba bean root metabolic response and soil health
Ying Ding, Mengna Tao, Lanqing Xu, Chuanxi Wang, Jinghong Wang, Chunjie Zhao, Zhenggao Xiao, Zhenyu Wang
Science of The Total Environment.2024; 927: 171976. CrossRef - Integrative analysis of microbiome and metabolome revealed the effect of microbial inoculant on microbial community diversity and function in rhizospheric soil under tobacco monoculture
Xianjun Lai, Wangjun Duan, Wenyou Zhang, Zhengsong Peng, Xianjun Wang, Haiyan Wang, Xiaobo Qi, Huaqiang Pi, Kailu Chen, Lang Yan, Florian M. Freimoser
Microbiology Spectrum.2024;[Epub] CrossRef - Unlocking Zn biofortification: leveraging high-Zn wheat and rhizospheric microbiome interactions in high-pH soils
Jun Yang, Chenrui Liu, Runze Wang, Junfeng Xu, Cui Huang, Wenxiang Wang, Siqi Zhang, Wenting She, Xuemei Zhang, Mei Shi, Eduardo Moreno-Jiménez, Yinglong Chen, Zhaohui Wang
Biology and Fertility of Soils.2024; 60(7): 969. CrossRef - Plant-associated bacteria of Syringa vulgaris L. in an urban environment
Elena A. Tsavkelova, Olga A. Churikova, Elena A. Volynchikova, Sofia S. Sapun, Maria R. Leontieva, Anna S. Speranskaya, Evgenii A. Konorov, Anastasia A. Krinitsina
Plant and Soil.2024; 497(1-2): 585. CrossRef -
Unveiling the multifaceted potential of
Pseudomonas khavaziana
strain SR9: a promising biocontrol agent for wheat crown rot
Shengzhi Guo, Yuqi Liu, Yanling Yin, Yating Chen, Siyu Jia, Tong Wu, Jun Liao, Xinyan Jiang, Hafiz Abdul Kareem, Xuejun Li, Junfeng Pan, Yao Wang, Xihui Shen, Frédérique Reverchon, Sandra Tienda
Microbiology Spectrum.2024;[Epub] CrossRef - Growth promotion and modulation of the soybean microbiome INTACTA RR PRO with the application of the fungi Trichoderma harzianum and Purpureocillum lilacinum
Everlon Cid Rigobelo, Lucas Amoroso Lopes de Carvalho, Carlos Henrique Barbosa Santos, Edvan Teciano Frezarin, Daniel Guariz Pinheiro, Daniel Nicodemo, Olubukola Oluranti Babalola, Nicolas Desoignies
Scientific Reports.2024;[Epub] CrossRef - Harnessing the potential of nitrogen-fixing cyanobacteria: A rich bio-resource for sustainable soil fertility and enhanced crop productivity
Taufiq Nawaz, Nitish Joshi, Dillon Nelson, Shah Saud, Nader R. Abdelsalam, Mohamed M.A. Abdelhamid, Mariusz Jaremko, Tanzeel Ur Rahman, Shah Fahad
Environmental Technology & Innovation.2024; 36: 103886. CrossRef - Unraveling the Role of Plant Growth Regulators and Plant Growth Promoting Rhizobacteria in Phytoremediation
Sadaf Jan, Renu Bhardwaj, Neeta Raj Sharma, Rattandeep Singh
Journal of Plant Growth Regulation.2024; 43(8): 2471. CrossRef - Plant Growth Promoting Rhizobacteria: Their potential in sustainable Agriculture
Aarti, Sujata, Shivam Parmar, Anil Kumar*
Journal of Science Innovations and Nature of Earth.2024; 4(2): 40. CrossRef - Effect of Plant Growth Promoting Rhizobacteria on the Development and Biochemical Composition of Cucumber under Different Substrate Moisture Levels
Gerardo Zapata-Sifuentes, Manuel Fortis-Hernández, Jorge Sáenz-Mata, Christian Silva-Martínez, Liliana Lara-Capistran, Pablo Preciado-Rangel, Luis Guillermo Hernández-Montiel
Microbiology Research.2024; 15(3): 1505. CrossRef - Inoculation effect of heavy metal tolerant and plant growth promoting rhizobacteria for rhizoremediation
S. Y. Lee, Y.-Y. Lee, K.-S. Cho
International Journal of Environmental Science and Technology.2024; 21(2): 1419. CrossRef - Combating wheat yellow mosaic virus through microbial interactions and hormone pathway modulations
Fangyan Wang, Haoqing Zhang, Hongwei Liu, Chuanfa Wu, Yi Wan, Lifei Zhu, Jian Yang, Peng Cai, Jianping Chen, Tida Ge
Microbiome.2024;[Epub] CrossRef - Soil microbial community composition by crop type under rotation diversification
Donglin Zong, Yefu Zhou, Jing Zhou, Yanan Zhao, Xiaokang Hu, Tao Wang
BMC Microbiology.2024;[Epub] CrossRef - Quality analysis and function prediction of soil microbial communities of Polygonatum cyrtonema in two indigenous-origins
Li Yang, Qing Yang, Jiansang Wulu, Yue Wang, Wenfang Jin, Zhigang Yan, Zhifeng Zhang
Frontiers in Microbiology.2024;[Epub] CrossRef - Contributions of the dark septate endophyte extracellular metabolites to plant growth, metabolism and root-associated microbial community structure
Yinli Bi, Shuhui Wang, Yaning Song, Hai Tan, Peter Christie
Plant and Soil.2024;[Epub] CrossRef - DESENVOLVIMENTO DE Urochloa ruziziensis SUBMETIDA À INOCULAÇÃO COM BACTÉRIAS PROMOTORAS DE CRESCIMENTO VEGETAL
Iuri Beltrão Naves, Danilo José Santos Gomes, Marihus Altoé Baldotto, Lílian Estrela Borges Baldotto
Revista Contemporânea.2024; 4(10): e6199. CrossRef - The control effect of endophytic fungus Fusarium equiseti FUS-8 on cotton Verticillium wilt and its effects on soil microbial communities
Yun Zhang, Chao Xue, Xin Wang, Jianhua Zhang, Aiyu Wang, Yuanxue Yang, Xi Jia, Wenjuan Zhang, Ming Zhao
Plant and Soil.2024;[Epub] CrossRef - Effects of functional microbial agents on the microbial community and fertility of reclaimed soil in a coal mining area
Zixu Li, Jianhua Li, Tingting Li, Qiang Zhang, Chunhua Gao, Jinjing Lu, Dongsheng Jin, Minggang Xu
Environmental Technology & Innovation.2024; 36: 103891. CrossRef - From Microscopy to Omics: A Comprehensive Review of Tools and Techniques in Studying Endophytic Adaptation Under Abiotic and Biotic Stress
Rajinder Kaur, Charanjit Kaur, Gursharan Kaur, Jaspreet Kaur, Santosh Kumar Rath, Vagish Dwibedi
Journal of Plant Growth Regulation.2024;[Epub] CrossRef - Endophytic Bacteria Improves the Growth of Tomato Plants: An Initial Trial Towards Sustainable Agriculture
Yasir Sidiq, Arbiatun Nurlaili Assyifa, Triastuti Rahayu, Kistantia Elok Mumpuni
IOP Conference Series: Earth and Environmental Science.2024; 1357(1): 012015. CrossRef - Soybean nodulation shapes the rhizosphere microbiome to increase rapeseed yield
Yu Liu, Qin Han, Jiaming Zhang, Xuehai Zhang, Yuqin Chen, Mingbo Li, Yongfang Hao, Yujie Hong, Ruizhen Tang, Brett J. Ferguson, Peter M. Gresshoff, Jie Kuai, Guangsheng Zhou, Xia Li, Hongtao Ji
Journal of Advanced Research.2024;[Epub] CrossRef - Microbial Biofortification of Grain Crops: Current State and Prospects
Daria Kolpakova, Yuliya Serazetdinova, Natalya Fotina, Alexandra Zaushintsena, Lyudmila Asyakina, Anna Loseva
Food Processing: Techniques and Technology.2024; : 191. CrossRef - Biochar assists phytoremediation of cadmium by regulation of rhizosphere microbiome in paddy fields
Haomin Wang, Cong Shi, Quanxi Zhang, Donggang Guo, Shuo Liu, Qilin Yu
Environmental Technology & Innovation.2024; 36: 103757. CrossRef - In preprints: hormonal stepping stones to diverging root organogenesis
Clare Hurst, Miriam L. Gifford
Development.2024;[Epub] CrossRef - Genomic profiling and assessment of the plant growth-enhancing traits in the novel actinomycete, Plantactinospora soli sp. nov.
Lili Wang, Zhouai Ma, Ya Zhang, Qiuyu Chen, Qi Shen, Jiaqi Yao, Chengliang Cao, Rongpeng Li, Jihong Jiang
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Diversity and Plant Growth Properties of Rhizospheric Bacteria Associated with Medicinal Plants
Dilfuza Jabborova, Bakhodir Mamarasulov, Kakhramon Davranov, Yuriy Enakiev, Neha Bisht, Sachidanand Singh, Svilen Stoyanov, Amar P. Garg
Indian Journal of Microbiology.2024; 64(2): 409. CrossRef - Exploring the root-associated microbiome of the resurrection plant Myrothamnus flabellifolia
Shandry M. Tebele, Rose A. Marks, Jill M. Farrant
Plant and Soil.2024; 500(1-2): 53. CrossRef - Use of ginger extract and bacterial inoculants for the suppression of Alternaria solani causing early blight disease in Tomato
Sajjad Hyder, Amjad Shahzad Gondal, Anam Sehar, Aimen Razzaq Khan, Nadia Riaz, Zarrin Fatima Rizvi, Rashid Iqbal, Mohamed S. Elshikh, Khaloud M. Alarjani, Muhammed Habib ur Rahman, Muhammad Rizwan
BMC Plant Biology.2024;[Epub] CrossRef - The succession of rhizosphere microbial community in the continuous cropping soil of tobacco
Guitong Li, Pengfei Gong, Jie Zhou, Lin Wang, Xin Song, Penghui Ding, Yunfeng Jin, Yuzhen Zhang, Xiaoqian Zhou, Jianming Yang, Zhaobao Wang, Long Yun, Jie Ren
Frontiers in Environmental Science.2024;[Epub] CrossRef - Phytoremediation of Arsenic (As) in rice plants, mediated by strain IU31 through antioxidant responses and phytohormones synthesis
Ihsan Ullah, Yasir Anwar, Muhammad Faisal Siddiqui, Nadiah Alsulami, Raza Ullah
Environmental Pollution.2024; 355: 124207. CrossRef - Effects of lactic acid bacteria and molasses on the fermentation quality, in vitro dry matter digestibility, and microbial community of Korshinsk peashrub (Caragana korshinskii Kom.) silages harvested at two growth stages
Wencan Ke, Yan Wang, Marketta Rinne, Marcia de Oliveira Franco, Fuhou Li, Yufan Lin, Qing Zhang, Yimin Cai, Guijie Zhang
Grass and Forage Science.2024; 79(1): 56. CrossRef - Integrated microbiome and metabolomics analysis reveal the relationship between plant-specialized metabolites and microbial community in Phellodendron amurense
Wanran Zhang, Ranran Gao, Lixia Tian, Zhichao Xu
Frontiers in Plant Science.2024;[Epub] CrossRef - The potential of Actinoplanes spp. for alleviating the oxidative stress induced by thallium toxicity in wheat plants
Nashwa Hagagy, Hamada AbdElgawad
Plant Physiology and Biochemistry.2024; 213: 108853. CrossRef - Drought and salt stress mitigation in crop plants using stress-tolerant auxin-producing endophytic bacteria: a futuristic approach towards sustainable agriculture
Sadananda Mal, Shweta Panchal
Frontiers in Plant Science.2024;[Epub] CrossRef - Prospects of Bacillus amyloliquefaciens (MZ945930) Mediated Enhancement of Capsicum annuum L. Plants Under Stress of Alternaria alternata in Terms of Physiological Traits, Thiol Content, Antioxidant Defense, and Phytohormones
Reda E. Abdelhameed, Rabab A. Metwally, Shereen A. Soliman
Journal of Plant Growth Regulation.2024; 43(9): 3265. CrossRef - Up-regulation of growth-related gene expression in tobacco by volatile compounds released by Bacillus velezensis WSW007
Yuxi He, Jieli Peng, Nan Jia, Xu Wang, Jia Ma, Hao Wang, Cuimian Zhang, Entao Wang, Dong Hu, Zhanwu Wang
Scientific Reports.2024;[Epub] CrossRef - Neopolyploidy has variable effects on the diversity and composition of the wild strawberry microbiome
Thomas J. Anneberg, Nevin P. Cullen, Elizabeth M. O'Neill, Na Wei, Tia‐Lynn Ashman
American Journal of Botany.2024;[Epub] CrossRef - Bacterial community structure and co-occurrence networks in the rhizosphere and root endosphere of the grafted apple
Hui Cao, Longxiao Xu, Jianfei Song, Mi Xun, Weiwei Zhang, Hongqiang Yang
BMC Microbiology.2024;[Epub] CrossRef - Seeds of Stevia rebaudiana Bertoni as a Source of Plant Growth-Promoting Endophytic Bacteria with the Potential to Synthesize Rebaudioside A
Magdalena Simlat, Agata Ptak, Anita Jaglarz, Agnieszka Szewczyk, Michał Dziurka, Artur Gurgul
International Journal of Molecular Sciences.2023; 24(3): 2174. CrossRef - Effect of Arbuscular mycorrhizal fungi (AMF) inoculation on endophytic bacteria of lettuce
Zhixiang Han, Zihua Zhang, Yingyue Li, Boyan Wang, Qingchen Xiao, Zishan Li, Xiaowan Geng, Keqing Lin, Tao Huang, Xiaoyu Li, Jin Chen
Physiological and Molecular Plant Pathology.2023; 126: 102036. CrossRef - Deciphering the mechanisms, hormonal signaling, and potential applications of endophytic microbes to mediate stress tolerance in medicinal plants
Praveen Pandey, Arpita Tripathi, Shweta Dwivedi, Kanhaiya Lal, Tripta Jhang
Frontiers in Plant Science.2023;[Epub] CrossRef - Plants and endophytes interaction: a “secret wedlock” for sustainable biosynthesis of pharmaceutically important secondary metabolites
Poonam Kumari, Nikky Deepa, Prabodh Kumar Trivedi, Brajesh K. Singh, Vaibhav Srivastava, Akanksha Singh
Microbial Cell Factories.2023;[Epub] CrossRef - Calendula officinalis—A Great Source of Plant Growth Promoting Endophytic Bacteria (PGPEB) and Biological Control Agents (BCA)
Polina C. Tsalgatidou, Eirini-Evangelia Thomloudi, Kallimachos Nifakos, Costas Delis, Anastasia Venieraki, Panagiotis Katinakis
Microorganisms.2023; 11(1): 206. CrossRef - Exploration of plant growth promoting traits and regulatory mechanisms of Bacillus anthracis PM21 in enhancing salt stress tolerance in maize
Muhammad Atif Azeem, Fawad Ali, Abid Ullah, Mahmood Iqbal, Kishwar Ali, Dunia A. Al Farraj, Mohamed S. Elshikh, Qirat Naz, Muhammad Farooq Hussain Munis, Hassan Javed Chaudhary
Environmental Science and Pollution Research.2023; 30(31): 77499. CrossRef - The Mechanisms of the Growth Promotion and Protective Effects of Endophytic PGP Bacteria in Wheat Plants Under the Impact of Drought (Review)
O. V. Lastochkina, Ch. R. Allagulova
Applied Biochemistry and Microbiology.2023; 59(1): 14. CrossRef - Biochemical Characterization and Potential of Bacillus safensis Strain SCAL1 to Mitigate Heat Stress in Solanum lycopersicum L.
Tehmeena Mukhtar, Fawad Ali, Mazhar Rafique, Javed Ali, Muhammad Siddique Afridi, Donald Smith, Shehzad Mehmood, Amna, Alfred Souleimanov, Ghulam Jellani, Tariq Sultan, Farooq Hussain Munis, Hassan Javed Chaudhary
Journal of Plant Growth Regulation.2023; 42(1): 523. CrossRef - Continuous cropping of cut chrysanthemum reduces rhizospheric soil bacterial community diversity and co-occurrence network complexity
Jun Li, Xiaoyu Cheng, Guixin Chu, Baowei Hu, Rui Tao
Applied Soil Ecology.2023; 185: 104801. CrossRef - Sphingomonas sediminicola Is an Endosymbiotic Bacterium Able to Induce the Formation of Root Nodules in Pea (Pisum sativum L.) and to Enhance Plant Biomass Production
Candice Mazoyon, Bertrand Hirel, Audrey Pecourt, Manuella Catterou, Laurent Gutierrez, Vivien Sarazin, Fréderic Dubois, Jérôme Duclercq
Microorganisms.2023; 11(1): 199. CrossRef - Bioprospeksi Bakteri Asal Akar Nanas (Ananas comosus L. Merr) Lahan Gambut Kayu Agung, Sumatra Selatan, sebagai Agen Biostimulan dan Bioprotektan
Erma Suryanti, Dewi Chusniasih, Muhammad Asril, Ika Agus Rini , Wulandari Putri Antika, Nadia Rahmah
Jurnal Ilmu Pertanian Indonesia.2023; 28(3): 352. CrossRef - Enhancement of humic acid on plant growth in a Cd-contaminated matrix: performance, kinetics, and mechanism
Yan Zhao, Yang Shi, Zhi Wang, Guangsheng Qian
Environmental Science and Pollution Research.2023; 30(3): 5677. CrossRef - Optimizing Crop Production with Bacterial Inputs: Insights into Chemical Dialogue between Sphingomonas sediminicola and Pisum sativum
Candice Mazoyon, Stéphane Firmin, Lamine Bensaddek, Audrey Pecourt, Amélie Chabot, Michel-Pierre Faucon, Vivien Sarazin, Fréderic Dubois, Jérôme Duclercq
Microorganisms.2023; 11(7): 1847. CrossRef - Mechanisms of Growth Promotional and Protective Effects of Endophytic PGP-Bacteria in Wheat Plants Under the Impact of Drought (Review)
О. V. Lastochkina, Ch. R. Allagulova
Прикладная биохимия и микробиология.2023; 59(1): 17. CrossRef - Seed Bio-priming of wheat with a novel bacterial strain to modulate drought stress in Daegu, South Korea
Shifa Shaffique, Muhammad Imran, Sang-Mo Kang, Muhammad Aaqil Khan, Sajjad Asaf, Won-Chan Kim, In-Jung Lee
Frontiers in Plant Science.2023;[Epub] CrossRef - Sphingomonas sediminicola Dae20 Is a Highly Promising Beneficial Bacteria for Crop Biostimulation Due to Its Positive Effects on Plant Growth and Development
Candice Mazoyon, Manuella Catterou, Abdelrahman Alahmad, Gaëlle Mongelard, Stéphanie Guénin, Vivien Sarazin, Fréderic Dubois, Jérôme Duclercq
Microorganisms.2023; 11(8): 2061. CrossRef - Unraveling the functional genes present in rhizosphere microbiomes of Solanum lycopersicum
Afeez Adesina Adedayo, Ayomide Emmanuel Fadiji, Olubukola Oluranti Babalola
PeerJ.2023; 11: e15432. CrossRef - Temporal dynamics of endophytic bacterial and fungal communities during spike development in Piper longum L.
Sushma Mishra, Shilpi Sharma
Physiology and Molecular Biology of Plants.2023; 29(8): 1117. CrossRef - Complete genome of Sphingomonas paucimobilis ZJSH1, an endophytic bacterium from Dendrobium officinale with stress resistance and growth promotion potential
Jin Li, Hangtao Wu, Qian Pu, Chu Zhang, Ying Chen, Zhengxin Lin, Xiufang Hu, Ou Li
Archives of Microbiology.2023;[Epub] CrossRef - Plant-microbiome interactions under drought—insights from the molecular machinist’s toolbox
Mohamed Ait-El-Mokhtar, Abdelilah Meddich, Marouane Baslam
Frontiers in Sustainable Food Systems.2023;[Epub] CrossRef - New Sulfur-Containing Diketopiperazine from Marine-Derived Bacteria Streptomyces rochei sp. 81 with Potent Carbonic Anhydrase II Inhibition
Ahmed N. Al-Rawahi, Raeid M. M. Abed, Najeeb Ur Rehman, Kashif Rafiq, Ajmal Khan, Abdul L. Khan, Majid Khan, Sobia Ahsan Halim, Fahad Al-Senafi, Huda Mahmoud, Ahmed Al-Harrasi
Chemistry of Natural Compounds.2023; 59(2): 346. CrossRef - Root microbiome diversity and structure of the Sonoran desert buffelgrass (Pennisetum ciliare L.)
Angélica Jara-Servin, Adán Silva, Hugo Barajas, Rocío Cruz-Ortega, Clara Tinoco-Ojanguren, Luis D. Alcaraz, Marcela Pagano
PLOS ONE.2023; 18(5): e0285978. CrossRef - Cooperation of arbuscular mycorrhizal fungi and bacteria to facilitate the host plant growth dependent on soil pH
Zengwei Feng, Xiaodi Liu, Yongqiang Qin, Guangda Feng, Yang Zhou, Honghui Zhu, Qing Yao
Frontiers in Microbiology.2023;[Epub] CrossRef - Exopolysaccharide-producing bacteria enhanced Pb immobilization and influenced the microbiome composition in rhizosphere soil of pakchoi (Brassica chinensis L.)
Ruiwen Cao, Yiling Zhang, Yuhao Ju, Wei Wang, Yanqiu Zhao, Nan Liu, Gangrui Zhang, Xingbao Wang, Xuesong Xie, Cunxi Dai, Yue Liu, Hongfei Yin, Kaiyuan Shi, Chenchen He, Weiyan Wang, Lingyu Zhao, Che Ok Jeon, Lujiang Hao
Frontiers in Microbiology.2023;[Epub] CrossRef - Sphingomonas liriopis sp. nov., Sphingomonas donggukensis sp. nov., and Sphingomonas tagetis sp. nov., isolated from Liriope platyphylla fruit, soil, and Tagetes patula roots
Inhyup Kim, Geeta Chhetri, Yoonseop So, Yonghee Jung, Sunho Park, Taegun Seo
Archives of Microbiology.2023;[Epub] CrossRef - The rootstock shape microbial diversity and functionality in the rhizosphere of Vitis vinifera L. cultivar Falanghina
Daniela Zuzolo, Maria Antonietta Ranauda, Maria Maisto, Maria Tartaglia, Antonello Prigioniero, Alessandra Falzarano, Giuseppe Marotta, Rosaria Sciarrillo, Carmine Guarino
Frontiers in Plant Science.2023;[Epub] CrossRef - The phytomicrobiome: solving plant stress tolerance under climate change
Abdul Latif Khan
Frontiers in Plant Science.2023;[Epub] CrossRef - Cadmium toxicity impacts plant growth and plant remediation strategies
Mehtab Muhammad Aslam, Eyalira Jacob Okal, Muhammad Waseem
Plant Growth Regulation.2023; 99(3): 397. CrossRef - Short-term responses of plant growth-promoting bacterial community to the herbicides imazethapyr and flumioxazin
Ademir Sergio Ferreira Araujo, Mariane Pertile, Romário Martins Costa, Mayanna Karlla Lima Costa, Rhaiana Oliveira de Aviz, Lucas William Mendes, Erika Valente de Medeiros, Diogo Paes da Costa, Vania Maria Maciel Melo, Arthur Prudencio de Araujo Pereira
Chemosphere.2023; 328: 138581. CrossRef - A nostoxanthin-producing bacterium, Sphingomonas nostoxanthinifaciens sp. nov., alleviates the salt stress of Arabidopsis seedlings by scavenging of reactive oxygen species
Lingmin Jiang, Jiyoon Seo, Yuxin Peng, Doeun Jeon, Ju Huck Lee, Cha Young Kim, Jiyoung Lee
Frontiers in Microbiology.2023;[Epub] CrossRef - Microbiome analysis revealed distinct microbial communities occupying different sized nodules in field-grown peanut
Md Shakhawat Hossain, Paul B. DeLaune, Terry J. Gentry
Frontiers in Microbiology.2023;[Epub] CrossRef - Developmental Phytohormones: Key Players in Host-Microbe Interactions
Rupali Gupta, Gautam Anand, Maya Bar
Journal of Plant Growth Regulation.2023; 42(12): 7330. CrossRef - Pesticide-tolerant microbial consortia: Potential candidates for remediation/clean-up of pesticide-contaminated agricultural soil
Mohammad Shahid, Mohammad Saghir Khan, Udai B. Singh
Environmental Research.2023; 236: 116724. CrossRef - Response of microbial communities in the phyllosphere ecosystem of tobacco exposed to the broad-spectrum copper hydroxide
Ruichao Feng, Hancheng Wang, Tingting Liu, Feng Wang, Liuti Cai, Xingjiang Chen, Songbai Zhang
Frontiers in Microbiology.2023;[Epub] CrossRef - Problems and prospects of utilization of bacterial endophytes for the management of plant diseases
Dhruva Kumar Jha
Indian Phytopathology.2023; 76(1): 3. CrossRef - Phage combination alleviates bacterial leaf blight of rice (Oryza sativa L.)
Hubiao Jiang, Changxin Li, Xuefang Huang, Temoor Ahmed, Solabomi Olaitan Ogunyemi, Shanhong Yu, Xiao Wang, Hayssam M. Ali, Fahad Khan, Chengqi Yan, Jianping Chen, Bin Li
Frontiers in Plant Science.2023;[Epub] CrossRef - Role of microbial inoculants as bio fertilizers for improving crop productivity: A review
Durre Shahwar, Zeenat Mushtaq, Humira Mushtaq, Abdulaziz A. Alqarawi, Younghoon Park, Thobayet S. Alshahrani, Shahla Faizan
Heliyon.2023; 9(6): e16134. CrossRef - Metabarcoding reveals response of rice rhizosphere bacterial community to rice bacterial leaf blight
Hubiao Jiang, Xinyan Xu, Yuan Fang, Solabomi Olaitan Ogunyemi, Temoor Ahmed, Xuqing Li, Yong Yang, Chengqi Yan, Jianping Chen, Bin Li
Microbiological Research.2023; 270: 127344. CrossRef - Pheno- and Genotyping of Three Novel Bacteriophage Genera That Target a Wheat Phyllosphere Sphingomonas Genus
Leise Riber, Alexander Byth Carstens, Peter Erdmann Dougherty, Chayan Roy, Katharina Willenbücher, Frank Hille, Charles M. A. P. Franz, Lars Hestbjerg Hansen
Microorganisms.2023; 11(7): 1831. CrossRef - Screening of plant growth-promoting attributes bearing endogenous bacteria from abiotic stress resisting high altitude plants
Manpreet Kaur, Arun Karnwal
Journal of Agriculture and Food Research.2023; 11: 100489. CrossRef - Phylogeny, phenotypic characteristics and pathogenicity of Sphingomonas sp. and Erwinia persicina as bacterial causal agents of lettuce diseases in southwest of Iran
Vahid Keshavarz-Tohid, Somayeh Ebrahimi
Physiological and Molecular Plant Pathology.2023; 127: 102124. CrossRef - Tug of War-Who is the Winner? Canker Disease Restructures the Endophytic Bacterial Community of Citrus
Jian-Yu Zhou, Yi Zhang, Wen-Ping Xu, Misbah Naz, Xiao-Meng Li, Xu Li, Bi-Ying Zhao, Shan-Shan Qi, Zhi-Cong Dai, Dao-Lin Du
Horticultural Science and Technology.2023; 41(5): 605. CrossRef - Physiological Effects of Microbial Biocontrol Agents in the Maize Phyllosphere
María Fiamma Grossi Vanacore, Melina Sartori, Francisco Giordanino, Germán Barros, Andrea Nesci, Daiana García
Plants.2023; 12(24): 4082. CrossRef - Towards further understanding the applications of endophytes: enriched source of bioactive compounds and bio factories for nanoparticles
Nisha Choudhary, Naveen Dhingra, Amel Gacem, Virendra Kumar Yadav, Rakesh Kumar Verma, Mahima Choudhary, Uma Bhardwaj, Rajendra Singh Chundawat, Mohammed S. Alqahtani, Rajarshi Kumar Gaur, Lienda Bashier Eltayeb, Waleed Al Abdulmonem, Byong-Hun Jeon
Frontiers in Plant Science.2023;[Epub] CrossRef - Phytoextraction of As by Pteris vittata L. assisted with municipal sewage sludge compost and associated mechanism
Guanghui Guo, Degang Zhang, Mei Lei, Xiaoming Wan, Jun Yang, Heng Wei, Shiqi Chen
Science of The Total Environment.2023; 893: 164705. CrossRef - Novel Approaches for Sustainable Horticultural Crop Production: Advances and Prospects
Oksana Lastochkina, Sasan Aliniaeifard, Maryam SeifiKalhor, Massimo Bosacchi, Dilara Maslennikova, Alsu Lubyanova
Horticulturae.2022; 8(10): 910. CrossRef - Endophytes and their potential in biotic stress management and crop production
Parul Chaudhary, Upasana Agri, Anuj Chaudhary, Ashish Kumar, Govind Kumar
Frontiers in Microbiology.2022;[Epub] CrossRef - Acidic amelioration of soil amendments improves soil health by impacting rhizosphere microbial assemblies
Dele Chen, Xingxiang Wang, Víctor J. Carrión, Shan Yin, Zhengfu Yue, Yangwenke Liao, Yuanhua Dong, Xiaogang Li
Soil Biology and Biochemistry.2022; 167: 108599. CrossRef - Mangrove’s rhizospheric engineering with bacterial inoculation improve degradation of diesel contamination
Abdul Latif Khan, Muhammad Numan, Saqib Bilal, Sajjad Asaf, Kerri Crafword, Muhammad Imran, Ahmed Al-Harrasi, Jamal Nasser Al-Sabahi, Najeeb ur Rehman, Ahmed A-Rawahi, In-Jung Lee
Journal of Hazardous Materials.2022; 423: 127046. CrossRef - Microbial fuel cell as water-energy-environment nexus: a relevant strategy for treating streamlined effluents
Nikita Mittal, Ajay Kumar
Energy Nexus.2022; 7: 100097. CrossRef - Sphingomonas folii sp. nov., Sphingomonas citri sp. nov. and Sphingomonas citricola sp. nov., isolated from citrus phyllosphere
Guang-Da Feng, Jiali Li, Mingkai Pan, Xiaoqin Deng, Meng Chen, Qing Yao, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Heavy metal transporters: Functional mechanisms, regulation, and application in phytoremediation
Zi Yang, Fan Yang, Jia-Lan Liu, Hai-Tao Wu, Hao Yang, Yi Shi, Jie Liu, Yan-Feng Zhang, Yan-Rong Luo, Kun-Ming Chen
Science of The Total Environment.2022; 809: 151099. CrossRef - The Deterioration of Agronomical Traits of the Continuous Cropping of Stevia Is Associated With the Dynamics of Soil Bacterial Community
Xinjuan Xu, Qingyun Luo, Qichao Wei, Shangtao Jiang, Caixia Dong, Mohammad Omar Faruque, Zhongwen Huang, Zhenghua Xu, Changxi Yin, Zaibiao Zhu, Xuebo Hu
Frontiers in Microbiology.2022;[Epub] CrossRef - Effects of long-term application of organic manure and chemical fertilizer on soil properties and microbial communities in the agro-pastoral ecotone of North China
Riping Gao, Yu Duan, Jun Zhang, Yongfeng Ren, Huanchun Li, Xiaoyue Liu, Peiyi Zhao, Yupeng Jing
Frontiers in Environmental Science.2022;[Epub] CrossRef - Root and Rhizosphere Microbiome of Tomato Plants Grown in the Open Field in the South of West Siberia under Mineral Fertilization
Natalia Naumova, Olga Baturina, Taisia Nechaeva, Marsel Kabilov
Horticulturae.2022; 8(11): 1051. CrossRef - Inoculations of soil by antagonistic strains modify tuberosphere bacterial communities and suppress common scab of potatoes
Tereza Patrmanova, Iva Krizkova, Daria Rapoport, Jan Kopecky, Sarka Hrychova, Marketa Sagova-Mareckova
Applied Soil Ecology.2022; 176: 104491. CrossRef -
Contrasting patterns of microbial dominance in the
Arabidopsis thaliana
phyllosphere
Derek S. Lundberg, Roger de Pedro Jové, Pratchaya Pramoj Na Ayutthaya, Talia L. Karasov, Or Shalev, Karin Poersch, Wei Ding, Anita Bollmann-Giolai, Ilja Bezrukov, Detlef Weigel
Proceedings of the National Academy of Sciences.2022;[Epub] CrossRef - Metagenomic analysis of the dynamical conversion of photosynthetic bacterial communities in different crop fields over different growth periods
Ju-E Cheng, Pin Su, Zhan-Hong Zhang, Li-Min Zheng, Zhong-Yong Wang, Muhammad Rizwan Hamid, Jian-Ping Dai, Xiao-Hua Du, Li-Jie Chen, Zhong-Ying Zhai, Xiao-Ting Kong, Yong Liu, De-Yong Zhang, Suzanne L. Ishaq
PLOS ONE.2022; 17(7): e0262517. CrossRef - Volatile organic compounds from Lysinibacillus macroides regulating the seedling growth of Arabidopsis thaliana
Dongying Zhao, Junhui Jiao, Binghai Du, Kai Liu, Chengqiang Wang, Yanqin Ding
Physiology and Molecular Biology of Plants.2022; 28(11-12): 1997. CrossRef - Unraveling global and diazotrophic bacteriomes of boreal forest floor feather mosses and their environmental drivers at the ecosystem and at the plant scale in North America
Marie Renaudin, Isabelle Laforest-Lapointe, Jean-Philippe Bellenger
Science of The Total Environment.2022; 837: 155761. CrossRef - Synergistic effects of Azospirillum brasilense and Bacillus cereus on plant growth, biochemical attributes and molecular genetic regulation of steviol glycosides biosynthetic genes in Stevia rebaudiana
Ashraf Elsayed, Amal M. Abdelsattar, Yasmin M. Heikal, Mohamed A. El-Esawi
Plant Physiology and Biochemistry.2022; 189: 24. CrossRef - Cultivation of Two Barnyard Varieties Improves Physicochemical Properties of Saline-Alkali Land through Mediating Rhizospheric Microbiome and Metabolome
Xueqin Wang, Xing Xu, Anqiao Lu, Xin Li, Fengju Zhang
Agronomy.2022; 12(6): 1322. CrossRef - Characterization of the Cultivable Endophytic Bacterial Community of Seeds and Sprouts of Cannabis sativa L. and Perspectives for the Application as Biostimulants
Morena Gabriele, Francesco Vitali, Elisa Chelucci, Carolina Chiellini
Microorganisms.2022; 10(9): 1742. CrossRef -
Genomic Characterization of Potential Plant Growth-Promoting Features of
Sphingomonas
Strains Isolated from the International Space Station
Jonathan Lombardino, Swati Bijlani, Nitin K. Singh, Jason M. Wood, Richard Barker, Simon Gilroy, Clay C. C. Wang, Kasthuri Venkateswaran, Kim M. Handley
Microbiology Spectrum.2022;[Epub] CrossRef - The role of plant-associated rhizobacteria in plant growth, biocontrol and abiotic stress management
Basharat Ahmad Bhat, Lubna Tariq, Showkat Nissar, Sheikh Tajamul Islam, Shahid Ul Islam, Zahid Mangral, Noshin Ilyas, Riyaz Z. Sayyed, Govarthanan Muthusamy, Woong Kim, Tanvir Ul Hasan Dar
Journal of Applied Microbiology.2022; 133(5): 2717. CrossRef - Sphingomonas sp. Hbc-6 alters physiological metabolism and recruits beneficial rhizosphere bacteria to improve plant growth and drought tolerance
Fang Wang, Yali Wei, Taozhe Yan, Cuicui Wang, Yinghui Chao, Mingyue Jia, Lizhe An, Hongmei Sheng
Frontiers in Plant Science.2022;[Epub] CrossRef - Diversity, Antimicrobial Activity, and Antibiotic Susceptibility Pattern of Endophytic Bacteria Sourced From Cordia dichotoma L
Mahima Sharma, Sharada Mallubhotla
Frontiers in Microbiology.2022;[Epub] CrossRef - Responses of Rhizosphere Soil Chemical Properties and Bacterial Community Structure to Major Afforestation Tree Species in Xiong’an New Area
Kefan Wang, Zhenlu Qiu, Mei Zhang, Xueying Li, Xin Fang, Mingyuan Zhao, Fuchen Shi
Forests.2022; 13(11): 1822. CrossRef - Valorization of African indigenous leafy vegetables: The role of phyllosphere microbiota
Chiara Misci, Eren Taskin, Filippo Vaccari, Margherita Dall'Asta, Samuel Imathiu, Pier Sandro Cocconcelli, Edoardo Puglisi
Food Research International.2022; 162: 111944. CrossRef - Effect of Stevia rebaudiana Bertoni residue on the arsenic phytoextraction efficiency of Pteris vittata L
Yingying Lu, Shuijiao Liao, Yiran Ding, Ying He, Ziyi Gao, Danna Song, Wei Tian, Xing Zhang
Journal of Hazardous Materials.2022; 421: 126678. CrossRef - Is Endophytic Colonization of Host Plants a Method of Alleviating Drought Stress? Conceptualizing the Hidden World of Endophytes
Roopashree Byregowda, Siddegowda Rajendra Prasad, Ralf Oelmüller, Karaba N. Nataraja, M. K. Prasanna Kumar
International Journal of Molecular Sciences.2022; 23(16): 9194. CrossRef - Assembly of rhizosphere microbial communities in Artemisia annua: recruitment of plant growth‐promoting microorganisms and inter‐kingdom interactions between bacteria and fungi
Yuhua Shi, Yanshuo Pan, Li Xiang, Zhihui Zhu, Wenbo Fu, Guangfei Hao, Zengchao Geng, Shilin Chen, Yuzhong Li, Dongfei Han
Plant and Soil.2022; 470(1-2): 127. CrossRef - Dynamic Alteration of Microbial Communities of Duckweeds from Nature to Nutrient-Deficient Condition
Chakrit Bunyoo, Peerapat Roongsattham, Sirikorn Khumwan, Juthaporn Phonmakham, Passorn Wonnapinij, Arinthip Thamchaipenet
Plants.2022; 11(21): 2915. CrossRef - Bacillus mojavensis, a Metal-Tolerant Plant Growth-Promoting Bacterium, Improves Growth, Photosynthetic Attributes, Gas Exchange Parameters, and Alkalo-Polyphenol Contents in Silver Nanoparticle (Ag-NP)-Treated Withania somnifera L. (Ashwagandha)
Mohammad Danish, Mohammad Shahid, Mohammad Tarique Zeyad, Najat A. Bukhari, Fatimah S. Al-Khattaf, Ashraf Atef Hatamleh, Sajad Ali
ACS Omega.2022; 7(16): 13878. CrossRef - Endophytic bacteria of wheat and the potential to improve microelement composition of grain
O. O. Makar, N. D. Romanyuk
Studia Biologica.2022; 16(3): 101. CrossRef - Soil carbon supplementation: Improvement of root-surrounding soil bacterial communities, sugar and starch content in tobacco (N. tabacum)
Shen Yan, Tianbao Ren, Wan Adibah Wan Mahari, Huilin Feng, Chensheng Xu, Fei Yun, Khor Waiho, Yaowei Wei, Su Shiung Lam, Guoshun Liu
Science of The Total Environment.2022; 802: 149835. CrossRef - Endophytic bacteria from the leaves of two types of albino tea plants, indicating the plant growth promoting properties
Huiyan Jia, Zuguo Xi, Jinqing Ma, Yifan Li, Changhong Hao, Mengqian Lu, Zheng-Zhu Zhang, Wei-Wei Deng
Plant Growth Regulation.2022; 96(2): 331. CrossRef - Unsnarling Plausible Role of Plant Growth-Promoting Rhizobacteria for Mitigating Cd-Toxicity from Plants: An Environmental Safety Aspect
Kanika Khanna, Puja Ohri, Renu Bhardwaj, Parvaiz Ahmad
Journal of Plant Growth Regulation.2022; 41(6): 2514. CrossRef - Tobacco straw biochar improved the growth of Chinese cherry (Prunus pseudocerasus) via altering plant physiology and shifting the rhizosphere bacterial community
Kun Yang, Yuwen Jiang, Jianning Wang, Xiaowei Cai, Zhuang Wen, Zhilang Qiu, Guang Qiao
Scientia Horticulturae.2022; 303: 111244. CrossRef - Differences of rhizospheric and endophytic bacteria are recruited by different watermelon phenotypes relating to rind colors formation
Jian Xiao, Si-yu Chen, Yan Sun, Shang-dong Yang, Yi He
Scientific Reports.2022;[Epub] CrossRef - Deciphering the plant microbiome to improve drought tolerance: Mechanisms and perspectives
Sajad Ali, Anshika Tyagi, Suvin Park, Rakeeb A. Mir, Muntazir Mushtaq, Basharat Bhat, Henda Mahmoudi, Hanhong Bae
Environmental and Experimental Botany.2022; 201: 104933. CrossRef - Volatile Organic Compounds of Streptomyces sp. TOR3209 Stimulated Tobacco Growth by Up-Regulating the Expression of Genes Related to Plant Growth and Development
Yuxi He, Wenyu Guo, Jieli Peng, Jinying Guo, Jia Ma, Xu Wang, Cuimian Zhang, Nan Jia, Entao Wang, Dong Hu, Zhanwu Wang
Frontiers in Microbiology.2022;[Epub] CrossRef -
Sphingomonas psychrotolerans sp. nov., isolated from root surface of Leontopodium leontopodioides in the Tianshan Mountains, Xinjiang, China
Yang Luo, Meng Zhou, Fang Wang, Hongmei Sheng
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Triterpenoid and Steroidal Saponins Differentially Influence Soil Bacterial Genera
Masaru Nakayasu, Shinichi Yamazaki, Yuichi Aoki, Kazufumi Yazaki, Akifumi Sugiyama
Plants.2021; 10(10): 2189. CrossRef - Bacterial Endophytes of Spring Wheat Grains and the Potential to Acquire Fe, Cu, and Zn under Their Low Soil Bioavailability
Orysia Makar, Agnieszka Kuźniar, Ostap Patsula, Yana Kavulych, Volodymyr Kozlovskyy, Agnieszka Wolińska, Ewa Skórzyńska-Polit, Olena Vatamaniuk, Olga Terek, Nataliya Romanyuk
Biology.2021; 10(5): 409. CrossRef - On the genetic architecture in a public tropical maize panel of the symbiosis between corn and plant growth-promoting bacteria aiming to improve plant resilience
Rafael Massahiro Yassue, Humberto Fanelli Carvalho, Raysa Gevartosky, Felipe Sabadin, Pedro Henrique Souza, Maria Leticia Bonatelli, João Lúcio Azevedo, Maria Carolina Quecine, Roberto Fritsche-Neto
Molecular Breeding.2021;[Epub] CrossRef - Tomato roots secrete tomatine to modulate the bacterial assemblage of the rhizosphere
Masaru Nakayasu, Kohei Ohno, Kyoko Takamatsu, Yuichi Aoki, Shinichi Yamazaki, Hisabumi Takase, Tsubasa Shoji, Kazufumi Yazaki, Akifumi Sugiyama
Plant Physiology.2021; 186(1): 270. CrossRef - Bioprospecting Desert Plants for Endophytic and Biostimulant Microbes: A Strategy for Enhancing Agricultural Production in a Hotter, Drier Future
Qiuwei Zhang, James F. White
Biology.2021; 10(10): 961. CrossRef - Orchid Root Associated Bacteria: Linchpins or Accessories?
Jaspreet Kaur, Jyotsna Sharma
Frontiers in Plant Science.2021;[Epub] CrossRef - Bacterial inoculation positively affects the quality and quantity of flax under deficit irrigation regimes
S. Rajabi‐Khamseh, A. Danesh Shahraki, M. Rafieiolhossaini, K. Saeidi
Journal of Applied Microbiology.2021; 131(1): 321. CrossRef - Microbial Interactions and Roles in Soil Fertility in Seasonal Freeze-Thaw Periods under Different Straw Returning Strategies
Mengqi Sun, Baoyu Chen, Hongjun Wang, Nan Wang, Taigang Ma, Yingshun Cui, Tianhao Luan, Seongjun Chun, Chunguang Liu, Lichun Wang
Agriculture.2021; 11(8): 779. CrossRef - The Endophytic Microbiome as a Hotspot of Synergistic Interactions, with Prospects of Plant Growth Promotion
Udaya Kumar Vandana, Jina Rajkumari, L. Paikhomba Singha, Lakkakula Satish, Hemasundar Alavilli, Pamidimarri D.V.N. Sudheer, Sushma Chauhan, Rambabu Ratnala, Vanisri Satturu, Pranab Behari Mazumder, Piyush Pandey
Biology.2021; 10(2): 101. CrossRef - Comparative analysis of bacterial and fungal endophytes responses to Candidatus Liberibacter asiaticus infection in leaf midribs of Citrus reticulata cv. Shatangju
Huaxue Yan, Birong Zhou, Bo Jiang, Yuanda Lv, M.D. Moniruzzaman, Guangyan Zhong, Yun Zhong
Physiological and Molecular Plant Pathology.2021; 113: 101590. CrossRef - Niche specificity and functional diversity of the bacterial communities associated with Ginkgo biloba and Panax quinquefolius
Hanan R. Shehata, Subramanyam Ragupathy, Thomas A. Henry, Steven G. Newmaster
Scientific Reports.2021;[Epub] CrossRef - Plant Growth-Promoting Endophytic Bacterial Community Inhabiting the Leaves of Pulicaria incisa (Lam.) DC Inherent to Arid Regions
Amr Fouda, Ahmed M. Eid, Albaraa Elsaied, Ehab F. El-Belely, Mohammed G. Barghoth, Ehab Azab, Adil A. Gobouri, Saad El-Din Hassan
Plants.2021; 10(1): 76. CrossRef - Applications of endophytic microbes in agriculture, biotechnology, medicine, and beyond
Sravanthi Goud Burragoni, Junhyun Jeon
Microbiological Research.2021; 245: 126691. CrossRef - Endophytic bacteria from Piper colubrinum suppress Phytophthora capsici infection in black pepper (Piper nigrum L.) and improve plant growth in the nursery
Nadiya Kollakkodan, K. N. Anith, N. S. Nysanth
Archives of Phytopathology and Plant Protection.2021; 54(1-2): 86. CrossRef - Mechanisms of Action of Microbial Biocontrol Agents against Botrytis cinerea
Rocío Roca-Couso, José David Flores-Félix, Raúl Rivas
Journal of Fungi.2021; 7(12): 1045. CrossRef - Persistent microbiome members in the common bean rhizosphere: an integrated analysis of space, time, and plant genotype
Nejc Stopnisek, Ashley Shade
The ISME Journal.2021; 15(9): 2708. CrossRef - Prospecting Endophytic Bacteria Endowed With Plant Growth Promoting Potential Isolated From Camellia sinensis
Shabiha Nudrat Hazarika, Kangkon Saikia, Atlanta Borah, Debajit Thakur
Frontiers in Microbiology.2021;[Epub] CrossRef - Horsenettle (Solanum carolinense) fruit bacterial communities are not variable across fine spatial scales
Ariel R. Heminger, Lisa K. Belden, Jacob N. Barney, Brian D. Badgley, David C. Haak
PeerJ.2021; 9: e12359. CrossRef - Virus diversity in metagenomes of a lichen symbiosis (Umbilicaria phaea): complete viral genomes, putative hosts and elevational distributions
Dominik Merges, Francesco Dal Grande, Carola Greve, Jürgen Otte, Imke Schmitt
Environmental Microbiology.2021; 23(11): 6637. CrossRef - Does Organic Farming Increase Raspberry Quality, Aroma and Beneficial Bacterial Biodiversity?
Daniela Sangiorgio, Antonio Cellini, Francesco Spinelli, Brian Farneti, Iuliia Khomenko, Enrico Muzzi, Stefano Savioli, Chiara Pastore, María Teresa Rodriguez-Estrada, Irene Donati
Microorganisms.2021; 9(8): 1617. CrossRef - Shotgun metagenomics reveals the functional diversity of root-associated endophytic microbiomes in maize plant
Ayomide Emmanuel Fadiji, Ayansina Segun Ayangbenro, Olubukola Oluranti Babalola
Current Plant Biology.2021; 25: 100195. CrossRef - Evaluation of applying an alkaline green tea/ferrous iron system to lindane remediation impacts to soil and plant growth-promoting microbial community
Siang Chen Wu, Chun-Chen Lu
Science of The Total Environment.2021; 786: 147511. CrossRef - Drought Tolerance Strategies in Plants: A Mechanistic Approach
Muhammad Ilyas, Mohammad Nisar, Nadeem Khan, Ali Hazrat, Aamir Hamid Khan, Kashif Hayat, Shah Fahad, Aziz Khan, Abid Ullah
Journal of Plant Growth Regulation.2021; 40(3): 926. CrossRef - Role of biochar, compost and plant growth promoting rhizobacteria in the management of tomato early blight disease
Mujahid Rasool, Adnan Akhter, Gerhard Soja, Muhammad Saleem Haider
Scientific Reports.2021;[Epub] CrossRef - General Limitations to Endophytic Entomopathogenic Fungi Use as Plant Growth Promoters, Pests and Pathogens Biocontrol Agents
Bamisope Steve Bamisile, Junaid Ali Siddiqui, Komivi Senyo Akutse, Luis Carlos Ramos Aguila, Yijuan Xu
Plants.2021; 10(10): 2119. CrossRef - Single and combined abiotic stressors affect maize rhizosphere bacterial microbiota
Rosa Vescio, Antonino Malacrinò, Alison E. Bennett, Agostino Sorgonà
Rhizosphere.2021; 17: 100318. CrossRef - Model Application of Entomopathogenic Fungi as Alternatives to Chemical Pesticides: Prospects, Challenges, and Insights for Next-Generation Sustainable Agriculture
Bamisope Steve Bamisile, Komivi Senyo Akutse, Junaid Ali Siddiqui, Yijuan Xu
Frontiers in Plant Science.2021;[Epub] CrossRef - Bacterial Endophytes as a Promising Approach to Enhance the Growth and Accumulation of Bioactive Metabolites of Three Species of Chenopodium Sprouts
Mohammed S. Almuhayawi, Mohamed Abdel-Mawgoud, Soad K. Al Jaouni, Saad M. Almuhayawi, Mohammed H. Alruhaili, Samy Selim, Hamada AbdElgawad
Plants.2021; 10(12): 2745. CrossRef - Insight into the Influencing Mechanism of Endophytic Bacteria on the Adsorption of Heavy Metals by Plants: A Review
Chiyue Huang, Zhaohui Guo, Pufeng Qin
Science of Advanced Materials.2021; 13(8): 1401. CrossRef - Dissection of physiological, transcriptional, and metabolic traits in two tall fescue genotypes with contrasting drought tolerance
Yun Kang, Shyamal Talukder, Zewei An, Ivone Torres‐Jerez, Nick Krom, David Huhman, Michael Udvardi, Malay C. Saha
Plant-Environment Interactions.2021; 2(6): 277. CrossRef - Plant growth–promoting traits of yeasts isolated from the tank bromeliad Vriesea minarum L.B. Smith and the effectiveness of Carlosrosaea vrieseae for promoting bromeliad growth
Andréa R. Marques, Alessandra A. Resende, Fátima C. O. Gomes, Ana Raquel O. Santos, Carlos A. Rosa, Alexandre A. Duarte, José Pires de Lemos-Filho, Vera Lúcia dos Santos
Brazilian Journal of Microbiology.2021; 52(3): 1417. CrossRef - Effectively controlling Fusarium root rot disease of Angelica sinensis and enhancing soil fertility with a novel attapulgite-coated biocontrol agent
Yang Liu, Yuan Tian, Liang Yue, Uwaremwe Constantine, Xia Zhao, Qin Zhou, Yun Wang, Yubao Zhang, Gaofeng Chen, Zhiheng Dun, Zengtuan Cui, Ruoyu Wang
Applied Soil Ecology.2021; 168: 104121. CrossRef - Use of Acyl-Homoserine Lactones Leads to Improved Growth of Ginseng Seedlings and Shifts in Soil Microbiome Structure
Jerald-Conrad Ibal, Min-Kyu Park, Gun-Seok Park, Byung-Kwon Jung, Tae-Hyung Park, Min-Sueng Kim, Gi-Ung Kang, Yeong-Jun Park, Jae-Ho Shin
Agronomy.2021; 11(11): 2177. CrossRef - Wheat Growth Dependent Succession of Culturable Endophytic Bacteria and Their Plant Growth Promoting Traits
Janki K. Patel, Krupa Gohel, Hiral Patel, Tanvi Solanki
Current Microbiology.2021; 78(12): 4103. CrossRef - Endophytic bacteria associated with the enhanced cadmium resistance in NHX1- overexpressing tobacco plants
Gang Wang, Dan Yang, Wuteng Wang, Jing Ji, Chao Jin, Chunfeng Guan
Environmental and Experimental Botany.2021; 188: 104524. CrossRef - Ancient Bacterial Class Alphaproteobacteria Cytochrome P450 Monooxygenases Can Be Found in Other Bacterial Species
Nomfundo Nzuza, Tiara Padayachee, Puleng Rosinah Syed, Justyna Dorota Kryś, Wanping Chen, Dominik Gront, David R. Nelson, Khajamohiddin Syed
International Journal of Molecular Sciences.2021; 22(11): 5542. CrossRef - Effect of Bacillus spp. and Brevibacillus sp. on the Photosynthesis and Redox Status of Solanum lycopersicum
Marino Costa-Santos, Nuno Mariz-Ponte, Maria Dias, Luísa Moura, Guilhermina Marques, Conceição Santos
Horticulturae.2021; 7(2): 24. CrossRef - Comparative Study between Exogenously Applied Plant Growth Hormones versus Metabolites of Microbial Endophytes as Plant Growth-Promoting for Phaseolus vulgaris L.
Mohamed A. Ismail, Mohamed A. Amin, Ahmed M. Eid, Saad El-Din Hassan, Hany A. M. Mahgoub, Islam Lashin, Abdelrhman T. Abdelwahab, Ehab Azab, Adil A. Gobouri, Amr Elkelish, Amr Fouda
Cells.2021; 10(5): 1059. CrossRef - Multi-Trait Wheat Rhizobacteria from Calcareous Soil with Biocontrol Activity Promote Plant Growth and Mitigate Salinity Stress
Anastasia Venieraki, Styliani N. Chorianopoulou, Panagiotis Katinakis, Dimitris L. Bouranis
Microorganisms.2021; 9(8): 1588. CrossRef - Endophytes enhance Asia minor bluegrass (Polypogon fugax) resistance to quizalofop-p-ethyl
Kailin Liu, Kun Luo, Aixing Mao, Lang Pan, Bei Yan, Jing Wu, Lifeng Hu, Min Liu, Xiangying Liu, Lianyang Bai
Plant and Soil.2020; 450(1-2): 373. CrossRef - Revealing the Impact of the Environment on Cistanche salsa: From Global Ecological Regionalization to Soil Microbial Community Characteristics
Xiao Sun, Jin Pei, Yu-lin Lin, Bao-li Li, Li Zhang, Bashir Ahmad, Lin-Fang Huang
Journal of Agricultural and Food Chemistry.2020; 68(32): 8720. CrossRef - Seed Priming with Endophytic Bacillus subtilis Modulates Physiological Responses of Two Different Triticum aestivum L. Cultivars under Drought Stress
Oksana Lastochkina, Darya Garshina, Sergey Ivanov, Ruslan Yuldashev, Regina Khafizova, Chulpan Allagulova, Kristina Fedorova, Azamat Avalbaev, Dilara Maslennikova, Massimo Bosacchi
Plants.2020; 9(12): 1810. CrossRef - Use of Plant Growth-Promoting Rhizobacteria in Maize and Sugarcane: Characteristics and Applications
Roberta Mendes dos Santos, Paola Andrea Escobar Diaz, Laiana Lana Bentes Lobo, Everlon Cid Rigobelo
Frontiers in Sustainable Food Systems.2020;[Epub] CrossRef - Promotion of saltgrass growth in a saline petroleum hydrocarbons contaminated soil using a plant growth promoting bacterial consortium
Mingqian Xia, Romy Chakraborty, Norman Terry, Rajendra Prasad Singh, Dafang Fu
International Biodeterioration & Biodegradation.2020; 146: 104808. CrossRef - The Dynamics of Endophytic Bacterial Community Structure in Rice Roots under Different Field Management Systems
Guan-Ying Lin, Chia-Yu Lin, Su-Jein Chang, Wei-Yi Lin
Agronomy.2020; 10(11): 1623. CrossRef - Correlation between soil microbial communities and tobacco aroma in the presence of different fertilizers
Shen Yan, Jiayuan Zhao, Tianbao Ren, Guoshun Liu
Industrial Crops and Products.2020; 151: 112454. CrossRef - A potential antifungal and growth-promoting bacterium Bacillus sp. KTMA4 from tomato rhizosphere
S. Karthika, Sebastian Jose Midhun, M.S. Jisha
Microbial Pathogenesis.2020; 142: 104049. CrossRef - Role of plant growth-promoting bacteria in sustainable agriculture
Priyanka Pathania, Ankita Rajta, Poonam C. Singh, Ranjana Bhatia
Biocatalysis and Agricultural Biotechnology.2020; 30: 101842. CrossRef - Plant growth‐promoting endophytic bacteria augment growth and salinity tolerance in rice plants
M. A. Khan, S. Asaf, A. L. Khan, A. Adhikari, R. Jan, S. Ali, M. Imran, K.‐M. Kim, I.‐J. Lee, H. Papen
Plant Biology.2020; 22(5): 850. CrossRef - Early blight suppression and plant growth promotion potential of the endophyte Aspergillus flavus in tomato plant
Fatma Abdel-Motaal, Noha Kamel, Soad El-Zayat, Mohamed Abou-Ellail
Annals of Agricultural Sciences.2020; 65(2): 117. CrossRef - Wheat dwarfing influences selection of the rhizosphere microbiome
Vanessa N. Kavamura, Rebekah J. Robinson, David Hughes, Ian Clark, Maike Rossmann, Itamar Soares de Melo, Penny R. Hirsch, Rodrigo Mendes, Tim H. Mauchline
Scientific Reports.2020;[Epub] CrossRef - Two-year study of biochar: Achieving excellent capability of potassium supply via alter clay mineral composition and potassium-dissolving bacteria activity
Mengyang Zhang, Muhammad Riaz, Bo Liu, Hao Xia, Zeinab El-desouki, Cuncang Jiang
Science of The Total Environment.2020; 717: 137286. CrossRef - Culture-Dependent and Culture-Independent Characterization of the Olive Xylem Microbiota: Effect of Sap Extraction Methods
Manuel Anguita-Maeso, Concepción Olivares-García, Carmen Haro, Juan Imperial, Juan A. Navas-Cortés, Blanca B. Landa
Frontiers in Plant Science.2020;[Epub] CrossRef - Methylobacterium, a major component of the culturable bacterial endophyte community of wild Brassica seed
Davood Roodi, James P. Millner, Craig McGill, Richard D. Johnson, Ruy Jauregui, Stuart D. Card
PeerJ.2020; 8: e9514. CrossRef - Corn microbial diversity and its relationship to yield
Shimaila Ali, Soledad Saldias, Nimalka Weerasuriya, Kristen Delaney, Saveetha Kandasamy, George Lazarovits
Canadian Journal of Microbiology.2020; 66(8): 457. CrossRef - Treatments with native Coleus forskohlii endophytes improve fitness and secondary metabolite production of some medicinal and aromatic plants
Anthati Mastan, Chikkarasanahalli Shivegowda Vivek Babu, Channayya Hiremath, Kalavagunta Venkata Naga Satya Srinivas, Arigari Niranjan Kumar, Jonnala Kotesh Kumar
International Microbiology.2020; 23(2): 345. CrossRef - Effects of Depolymerized Gellan with Different Molecular Weights on the Growth of Four Bedding Plant Species
Piotr Salachna
Agronomy.2020; 10(2): 169. CrossRef - Role of Microorganisms in the Remediation of Wastewater in Floating Treatment Wetlands: A Review
Munazzam Jawad Shahid, Ameena A. AL-surhanee, Fayza Kouadri, Shafaqat Ali, Neeha Nawaz, Muhammad Afzal, Muhammad Rizwan, Basharat Ali, Mona H. Soliman
Sustainability.2020; 12(14): 5559. CrossRef - Interkingdom signaling in plant-rhizomicrobiome interactions for sustainable agriculture
Manisha Phour, Anju Sehrawat, Satyavir Singh Sindhu, Bernard R. Glick
Microbiological Research.2020; 241: 126589. CrossRef - Effect of the endophytic plant growth promoting Enterobacter ludwigii EB4B on tomato growth
M.E.A. Bendaha, H.A. Belaouni
Hellenic Plant Protection Journal.2020; 13(2): 54. CrossRef - Biocontrol of Bacterial Wilt Disease Through Complex Interaction Between Tomato Plant, Antagonists, the Indigenous Rhizosphere Microbiota, and Ralstonia solanacearum
Tarek R. Elsayed, Samuel Jacquiod, Eman H. Nour, Søren J. Sørensen, Kornelia Smalla
Frontiers in Microbiology.2020;[Epub] CrossRef - Exploring the Microbiota of East African Indigenous Leafy Greens for Plant Growth, Health, and Resilience
Julian Taffner, Olivia Laggner, Adrian Wolfgang, Danny Coyne, Gabriele Berg
Frontiers in Microbiology.2020;[Epub] CrossRef - Elucidating Mechanisms of Endophytes Used in Plant Protection and Other Bioactivities With Multifunctional Prospects
Ayomide Emmanuel Fadiji, Olubukola Oluranti Babalola
Frontiers in Bioengineering and Biotechnology.2020;[Epub] CrossRef - Complete Genome Sequence of Pseudomonas psychrotolerans CS51, a Plant Growth-Promoting Bacterium, Under Heavy Metal Stress Conditions
Sang-Mo Kang, Sajjad Asaf, Abdul Latif Khan, Lubna, Adil Khan, Bong-Gyu Mun, Muhammad Aaqil Khan, Humaira Gul, In-Jung Lee
Microorganisms.2020; 8(3): 382. CrossRef - Sphingomonas: from diversity and genomics to functional role in environmental remediation and plant growth
Sajjad Asaf, Muhammad Numan, Abdul Latif Khan, Ahmed Al-Harrasi
Critical Reviews in Biotechnology.2020; 40(2): 138. CrossRef - Application of Transposon Insertion Sequencing to Agricultural Science
Belinda K. Fabian, Sasha G. Tetu, Ian T. Paulsen
Frontiers in Plant Science.2020;[Epub] CrossRef - Effect of Applying Struvite and Organic N as Recovered Fertilizers on the Rhizosphere Dynamics and Cultivation of Lupine (Lupinus angustifolius)
Ana A. Robles-Aguilar, Oliver Grunert, Emma Hernandez-Sanabria, Mohamed Mysara, Erik Meers, Nico Boon, Nicolai D. Jablonowski
Frontiers in Plant Science.2020;[Epub] CrossRef - Poly-γ-glutamic acid-producing bacteria reduced Cd uptake and effected the rhizosphere microbial communities of lettuce
Xiaohan Wang, Geyu Dong, Xingwang Liu, Shengkui Zhang, Can Li, Xianqin Lu, Tao Xia
Journal of Hazardous Materials.2020; 398: 123146. CrossRef - Sphingomonas hominis sp. nov., isolated from hair of a 21-year-old girl
Dao-Feng Zhang, Xi-Wen Cui, Zhe Zhao, Ai-Hua Zhang, Jian-Ke Huang, Wen-Jun Li
Antonie van Leeuwenhoek.2020; 113(10): 1523. CrossRef - Fungal and Bacterial Microbiome Associated with the Rhizosphere of Native Plants from the Atacama Desert
Alejandra Fuentes, Héctor Herrera, Trevor C. Charles, Cesar Arriagada
Microorganisms.2020; 8(2): 209. CrossRef - Extending thermotolerance to tomato seedlings by inoculation with SA1 isolate of Bacillus cereus and comparison with exogenous humic acid application
Muhammad Aaqil Khan, Sajjad Asaf, Abdul Latif Khan, Rahmatullah Jan, Sang-Mo Kang, Kyung-Min Kim, In-Jung Lee, Haitao Shi
PLOS ONE.2020; 15(4): e0232228. CrossRef - Complete genome sequence of Sphingomonas sp. Cra20, a drought resistant and plant growth promoting rhizobacteria
Yang Luo, Meng Zhou, Qi Zhao, Fang Wang, Jiangli Gao, Hongmei Sheng, Lizhe An
Genomics.2020; 112(5): 3648. CrossRef - Leaf-associated microbiomes of grafted tomato plants
Hirokazu Toju, Koji Okayasu, Michitaka Notaguchi
Scientific Reports.2019;[Epub] CrossRef - Endophytic bacterial communities of Jingbai Pear trees in north China analyzed with Illumina sequencing of 16S rDNA
Fei Ren, Wei Dong, Dong-Hui Yan
Archives of Microbiology.2019; 201(2): 199. CrossRef - Alleviation of salt stress response in soybean plants with the endophytic bacterial isolate Curtobacterium sp. SAK1
Muhammad Aaqil Khan, Sajjad Asaf, Abdul Latif Khan, Ihsan Ullah, Sajid Ali, Sang-Mo Kang, In-Jung Lee
Annals of Microbiology.2019; 69(8): 797. CrossRef - Endophytic Bacteria in Plant Salt Stress Tolerance: Current and Future Prospects
Anukool Vaishnav, Awadhesh K. Shukla, Anjney Sharma, Roshan Kumar, Devendra K. Choudhary
Journal of Plant Growth Regulation.2019; 38(2): 650. CrossRef - Metal Resistant Endophytic Bacteria Reduces Cadmium, Nickel Toxicity, and Enhances Expression of Metal Stress Related Genes with Improved Growth of Oryza Sativa, via Regulating Its Antioxidant Machinery and Endogenous Hormones
Rahmatullah Jan, Muhammad Aaqil Khan, Sajjad Asaf, Lubna, In-Jung Lee, Kyung Min Kim
Plants.2019; 8(10): 363. CrossRef - Integrated phytohormone production by the plant growth-promoting rhizobacterium Bacillus tequilensis SSB07 induced thermotolerance in soybean
Sang-Mo Kang, Abdul Latif Khan, Muhammad Waqas, Sajjad Asaf, Ko-Eun Lee, Yeon-Gyeong Park, Ah-Yeong Kim, Muhammad Aaqil Khan, Young-Hyun You, In-Jung Lee
Journal of Plant Interactions.2019; 14(1): 416. CrossRef - Sphingomonas sp. Cra20 Increases Plant Growth Rate and Alters Rhizosphere Microbial Community Structure of Arabidopsis thaliana Under Drought Stress
Yang Luo, Fang Wang, Yaolong Huang, Meng Zhou, Jiangli Gao, Taozhe Yan, Hongmei Sheng, Lizhe An
Frontiers in Microbiology.2019;[Epub] CrossRef - Diversity, distribution and multi‐functional attributes of bacterial communities associated with the rhizosphere and endosphere of timothy (Phleum pratenseL.)
D. Saleh, J. Jarry, M. Rani, K.A. Aliferis, P. Seguin, S.H. Jabaji
Journal of Applied Microbiology.2019; 127(3): 794. CrossRef - Halo-tolerant rhizospheric Arthrobacter woluwensis AK1 mitigates salt stress and induces physio-hormonal changes and expression of GmST1 and GmLAX3 in soybean
Muhammad Aaqil Khan, Ihsan Ullah, Muhammad Waqas, Muhammad Hamayun, Abdul Latif Khan, Sajjad Asaf, Sang-Mo Kang, Kyung-Min Kim, Rahmatullah Jan, In-Jung Lee
Symbiosis.2019; 77(1): 9. CrossRef - Drought tolerance improvement in plants: an endophytic bacterial approach
Abid Ullah, Mohammad Nisar, Hazrat Ali, Ali Hazrat, Kashif Hayat, Ayaz Ali Keerio, Muhammad Ihsan, Muhammad Laiq, Sana Ullah, Shah Fahad, Aziz Khan, Aamir Hamid Khan, Adnan Akbar, Xiyan Yang
Applied Microbiology and Biotechnology.2019; 103(18): 7385. CrossRef - Fumigation coupled with bio-organic fertilizer for the suppression of watermelon Fusarium wilt disease re-shapes the soil microbiome
Chao Xue, Zongzhuan Shen, Yuewen Hao, Sitian Yu, Yuchan Li, Weijie Huang, Yao Chong, Wei Ran, Rong Li, Qirong Shen
Applied Soil Ecology.2019; 140: 49. CrossRef - Effect of the inoculation of plant growth-promoting rhizobacteria on the photosynthetic characteristics of Sambucus williamsii Hance container seedlings under drought stress
Fangchun Liu, Hailin Ma, Lin Peng, Zhenyu Du, Bingyao Ma, Xinghong Liu
AMB Express.2019;[Epub] CrossRef - Beneficial and Pathogenic Arabidopsis Root-Interacting Fungi Differently Affect Auxin Levels and Responsive Genes During Early Infection
Anja K. Meents, Alexandra C. U. Furch, Marília Almeida-Trapp, Sedef Özyürek, Sandra S. Scholz, Alexander Kirbis, Teresa Lenser, Günter Theißen, Veit Grabe, Bill Hansson, Axel Mithöfer, Ralf Oelmüller
Frontiers in Microbiology.2019;[Epub] CrossRef - Synthesis of Biologically Active Gibberellins GA4 and GA7 by Microorganisms
T.P. Pirog, D.V. Havrylkina, N.O. Leonova, T.A. Shevchuk, G.O. Iutynska
Mikrobiolohichnyi Zhurnal.2019; 81(2): 90. CrossRef - Effect of Long-Term Farming Practices on Agricultural Soil Microbiome Members Represented by Metagenomically Assembled Genomes (MAGs) and Their Predicted Plant-Beneficial Genes
Johanna Nelkner, Christian Henke, Timo Wentong Lin, Wiebke Pätzold, Julia Hassa, Sebastian Jaenicke, Rita Grosch, Alfred Pühler, Alexander Sczyrba, Andreas Schlüter
Genes.2019; 10(6): 424. CrossRef - Paenibacillusstrains with nitrogen fixation and multiple beneficial properties for promoting plant growth
Xiaomeng Liu, Qin Li, Yongbin Li, Guohua Guan, Sanfeng Chen
PeerJ.2019; 7: e7445. CrossRef - Diversity and Functionality of Culturable Endophytic Bacterial Communities in Chickpea Plants
Clarisse Brígido, Sakshi Singh, Esther Menéndez, Maria Tavares, Bernard Glick, Maria Félix, Solange Oliveira, Mário Carvalho
Plants.2019; 8(2): 42. CrossRef -
Draft Genome Sequence of the UV-Resistant Antarctic Bacterium
Sphingomonas
sp. Strain UV9
Juan J. Marizcurrena, Danilo Morales, Pablo Smircich, Susana Castro-Sowinski, John J. Dennehy
Microbiology Resource Announcements.2019;[Epub] CrossRef - Bitki Probiyotik Bakteriler: Bitkiler Üzerindeki Rolleri ve Uygulamalar
Çiğdem KÜÇÜK
International Journal of Life Sciences and Biotechnology.2019; 2(1): 1. CrossRef - Decoding Wheat Endosphere–Rhizosphere Microbiomes in Rhizoctonia solani–Infested Soils Challenged by Streptomyces Biocontrol Agents
Ricardo Araujo, Christopher Dunlap, Steve Barnett, Christopher M.M. Franco
Frontiers in Plant Science.2019;[Epub] CrossRef - Pre-colonization of PGPR triggers rhizosphere microbiota succession associated with crop yield enhancement
Yang Zhang, Xu Gao, Zongzhuan Shen, Chengzhi Zhu, Zixuan Jiao, Rong Li, Qirong Shen
Plant and Soil.2019; 439(1-2): 553. CrossRef - Biotransformation of benzoin by Sphingomonas sp. LK11 and ameliorative effects on growth of Cucumis sativus
Amjad Ali, Tapan Kumar Mohanta, Sajjad Asaf, Najeebur Rehman, Saif Al-Housni, Ahmed Al-Harrasi, Abdul Latif Khan, Ahmed Al-Rawahi
Archives of Microbiology.2019; 201(5): 591. CrossRef - Comparison of Microbial Community of Rhizosphere and Endosphere in Kiwifruit
Min-Jung Kim, Heeil Do, Gyeongjun Cho, Rae-Dong Jeong, Youn-Sig Kwak
The Plant Pathology Journal.2019; 35(6): 705. CrossRef - Tomato plants rather than fertilizers drive microbial community structure in horticultural growing media
Oliver Grunert, Ana A. Robles-Aguilar, Emma Hernandez-Sanabria, Silvia D. Schrey, Dirk Reheul, Marie-Christine Van Labeke, Siegfried E. Vlaeminck, Tom G. L. Vandekerckhove, Mohamed Mysara, Pieter Monsieurs, Vicky M. Temperton, Nico Boon, Nicolai D. Jablon
Scientific Reports.2019;[Epub] CrossRef - The Xylella fastidiosa-Resistant Olive Cultivar “Leccino” Has Stable Endophytic Microbiota during the Olive Quick Decline Syndrome (OQDS)
Marzia Vergine, Joana B. Meyer, Massimiliano Cardinale, Erika Sabella, Martin Hartmann, Paolo Cherubini, Luigi De Bellis, Andrea Luvisi
Pathogens.2019; 9(1): 35. CrossRef - Prospecting endophytes from different Fe or Zn accumulating wheat genotypes for their influence as inoculants on plant growth, yield, and micronutrient content
Devendra Singh, Neelam Geat, Mahendra Vikram Singh Rajawat, Radha Prasanna, Abhijit Kar, Anju Mahendru Singh, Anil Kumar Saxena
Annals of Microbiology.2018; 68(12): 815. CrossRef - Interspecific Plant Interactions Reflected in Soil Bacterial Community Structure and Nitrogen Cycling in Primary Succession
Joseph E. Knelman, Emily B. Graham, Janet S. Prevéy, Michael S. Robeson, Patrick Kelly, Eran Hood, Steve K. Schmidt
Frontiers in Microbiology.2018;[Epub] CrossRef - Mechanisms of Cr(VI) resistance by endophytic Sphingomonas sp. LK11 and its Cr(VI) phytotoxic mitigating effects in soybean (Glycine max L.)
Saqib Bilal, Abdul Latif Khan, Raheem Shahzad, Yoon-Ha Kim, Muhammad Imran, Muhammad Jamil Khan, Ahmed Al-Harrasi, Tae Han Kim, In-Jung Lee
Ecotoxicology and Environmental Safety.2018; 164: 648. CrossRef - The Green Roof Microbiome: Improving Plant Survival for Ecosystem Service Delivery
Roberta Fulthorpe, J. Scott MacIvor, Pu Jia, Simone-Louise E. Yasui
Frontiers in Ecology and Evolution.2018;[Epub] CrossRef - Endophytic Microbial Consortia of Phytohormones-Producing Fungus Paecilomyces formosus LHL10 and Bacteria Sphingomonas sp. LK11 to Glycine max L. Regulates Physio-hormonal Changes to Attenuate Aluminum and Zinc Stresses
Saqib Bilal, Raheem Shahzad, Abdul L. Khan, Sang-Mo Kang, Qari M. Imran, Ahmed Al-Harrasi, Byung-Wook Yun, In-Jung Lee
Frontiers in Plant Science.2018;[Epub] CrossRef - Cultivated bacterial diversity associated with the carnivorous plant Utricularia breviscapa (Lentibulariaceae) from floodplains in Brazil
Felipe Rezende Lima, Almir José Ferreira, Cristine Gobbo Menezes, Vitor Fernandes Oliveira Miranda, Manuella Nóbrega Dourado, Welington Luiz Araújo
Brazilian Journal of Microbiology.2018; 49(4): 714. CrossRef - Variations in total phenolics and antioxidant enzymes cause phenotypic variability and differential resistant response in tomato genotypes against early blight disease
Zoia Arshad Awan, Amna Shoaib, Kashif Ali Khan
Scientia Horticulturae.2018; 239: 216. CrossRef - Complete genome sequencing and analysis of endophytic Sphingomonas sp. LK11 and its potential in plant growth
Sajjad Asaf, Abdul Latif Khan, Muhammad Aaqil Khan, Ahmed Al-Harrasi, In-Jung Lee
3 Biotech.2018;[Epub] CrossRef - Bacterial community structure associated with the rhizosphere soils and roots of Stellera chamaejasme L. along a Tibetan elevation gradient
Hui Jin, Xiaoyan Yang, Rentao Liu, Zhiqiang Yan, Xudong Li, Xiuzhuang Li, Anxiang Su, Yuhui Zhao, Bo Qin
Annals of Microbiology.2018; 68(5): 273. CrossRef - Synergistic plant–microbe interactions between endophytic bacterial communities and the medicinal plant Glycyrrhiza uralensis F.
Li Li, Osama Abdalla Abdelshafy Mohamad, Jinbiao Ma, Ariel D. Friel, Yangui Su, Yun Wang, Zulpiya Musa, Yonghong Liu, Brian P. Hedlund, Wenjun Li
Antonie van Leeuwenhoek.2018; 111(10): 1735. CrossRef - How Does Salinity Shape Bacterial and Fungal Microbiomes of Alnus glutinosa Roots?
Dominika Thiem, Marcin Gołębiewski, Piotr Hulisz, Agnieszka Piernik, Katarzyna Hrynkiewicz
Frontiers in Microbiology.2018;[Epub] CrossRef - Gibberellin biosynthesis and metabolism: A convergent route for plants, fungi and bacteria
Sonia Salazar-Cerezo, Nancy Martínez-Montiel, Jenny García-Sánchez, Rocío Pérez-y-Terrón, Rebeca D. Martínez-Contreras
Microbiological Research.2018; 208: 85. CrossRef - Antibacterial activity of endophytic fungi from the medicinal plant Uncaria tomentosa (Willd.) DC
Asfury Rodrigues Rodrigo, Vasconcelos de Araujo Atilon, Moura da Cunha Renildo, Maia Carvalho Clarice
Journal of Medicinal Plants Research.2018; 12(15): 179. CrossRef - Isolation and Identification of Bacterial Endophytes from Grasses along the Oregon Coast
James E. Dombrowski, Vicky G. Hollenbeck, Ruth C. Martin
American Journal of Plant Sciences.2017; 08(03): 574. CrossRef - Bacillus amyloliquefaciens BSL16 improves phytoremediation potential of Solanum lycopersicum during copper stress
Abdul Latif Khan, Saqib Bilal, Boshra Ahmed Halo, Ahmed Al-Harrasi, Abdur Rahim Khan, Muhammad Waqas, Ghanim Salim Al-Thani, Issa Al-Amri, Ahmed Al-Rawahi, In-Jung Lee
Journal of Plant Interactions.2017; 12(1): 550. CrossRef - Osmoprotective functions conferred to soybean plants via inoculation with Sphingomonas sp. LK11 and exogenous trehalose
Sajjad Asaf, Abdul Latif Khan, Muhammad Aaqil Khan, Qari Muhammad Imran, Byung-Wook Yun, In-Jung Lee
Microbiological Research.2017; 205: 135. CrossRef - Beneficial traits of bacterial endophytes belonging to the core communities of the tomato root microbiome
Baoyu Tian, Cuijuan Zhang, Yuan Ye, Jiaming Wen, Yimin Wu, Hongzhu Wang, Huimin Li, Shixian Cai, Weiting Cai, Zhiqiang Cheng, Shaonan Lei, Rongqin Ma, Chaojun Lu, Yi Cao, Xiaohong Xu, Keqin Zhang
Agriculture, Ecosystems & Environment.2017; 247: 149. CrossRef - Endophytic bacterial diversity of Avicennia marina helps to confer resistance against salinity stress in Solanum lycopersicum
Amjad Ali, Raheem Shahzad, Abdul Latif Khan, Boshera A. Halo, Rashid Al-Yahyai, Ahmed Al-Harrasi, Ahmed Al-Rawahi, In-Jung Lee
Journal of Plant Interactions.2017; 12(1): 312. CrossRef - Bottlenecks in commercialisation and future prospects of PGPR
Bushra Tabassum, Anwar Khan, Muhammad Tariq, Memoona Ramzan, Muhammad Saleem Iqbal Khan, Naila Shahid, Khadija Aaliya
Applied Soil Ecology.2017; 121: 102. CrossRef - The Effects of the Endophytic Bacterium Pseudomonas fluorescens Sasm05 and IAA on the Plant Growth and Cadmium Uptake of Sedum alfredii Hance
Bao Chen, Sha Luo, Yingjie Wu, Jiayuan Ye, Qiong Wang, Xiaomeng Xu, Fengshan Pan, Kiran Y. Khan, Ying Feng, Xiaoe Yang
Frontiers in Microbiology.2017;[Epub] CrossRef - Bacterial endophytes from arid land plants regulate endogenous hormone content and promote growth in crop plants: an example of Sphingomonas sp. and Serratia marcescens
Sajjad Asaf, Muhammad Aaqil Khan, Abdul Latif Khan, Muhammad Waqas, Raheem Shahzad, Ah-Yeong Kim, Sang-Mo Kang, In-Jung Lee
Journal of Plant Interactions.2017; 12(1): 31. CrossRef - Isolation and characterization of a novel silicate-solubilizing bacterial strainBurkholderia eburneaCS4-2 that promotes growth of japonica rice (Oryza sativaL. cv. Dongjin)
Sang-Mo Kang, Muhammad Waqas, Raheem Shahzad, Young-Hyun You, Sajjad Asaf, Muhammad Aaqil Khan, Ko-Eun Lee, Gil-Jae Joo, Sang-Jun Kim, In-Jung Lee
Soil Science and Plant Nutrition.2017; : 1. CrossRef - Diverse culturable diazotrophic endophytic bacteria from Poaceae plants show cross-colonization and plant growth promotion in wheat
Janki K. Patel, G. Archana
Plant and Soil.2017; 417(1-2): 99. CrossRef - Phylloplane bacteria of Jatropha curcas: diversity, metabolic characteristics, and growth-promoting attributes towards vigor of maize seedling
Garima Dubey, Bharati Kollah, Usha Ahirwar, Asit Mandal, Jyoti Kumar Thakur, Ashok Kumar Patra, Santosh Ranjan Mohanty
Canadian Journal of Microbiology.2017; 63(10): 822. CrossRef - Comparison of Prokaryotic and Eukaryotic Communities in Soil Samples with and without Tomato Bacterial Wilt Collected from Different Fields
Chol Gyu Lee, Toshiya Iida, Yohei Uwagaki, Yoko Otani, Kazuhiro Nakaho, Moriya Ohkuma
Microbes and environments.2017; 32(4): 376. CrossRef - Inner Plant Values: Diversity, Colonization and Benefits from Endophytic Bacteria
Hongwei Liu, Lilia C. Carvalhais, Mark Crawford, Eugenie Singh, Paul G. Dennis, Corné M. J. Pieterse, Peer M. Schenk
Frontiers in Microbiology.2017;[Epub] CrossRef - Plant growth-promoting endophyte Sphingomonas sp. LK11 alleviates salinity stress in Solanum pimpinellifolium
Abdul Latif Khan, Muhammad Waqas, Sajjad Asaf, Muhammad Kamran, Raheem Shahzad, Saqib Bilal, Muhammad Aaqil Khan, Sang-Mo Kang, Yoon-Ha Kim, Byung-Wook Yun, Ahmed Al-Rawahi, Ahmed Al-Harrasi, In-Jung Lee
Environmental and Experimental Botany.2017; 133: 58. CrossRef - Effect of GFP-tagging on nitrogen fixation and plant growth promotion of an endophytic diazotrophic strain ofPaenibacillus polymyxa
Kiran Preet Padda, Akshit Puri, Qingwei Zeng, Chris P. Chanway, Xiaoqin Wu
Botany.2017; 95(9): 933. CrossRef - Biofertilizers: a potential approach for sustainable agriculture development
Trishna Mahanty, Surajit Bhattacharjee, Madhurankhi Goswami, Purnita Bhattacharyya, Bannhi Das, Abhrajyoti Ghosh, Prosun Tribedi
Environmental Science and Pollution Research.2017; 24(4): 3315. CrossRef - Endophytes of Jatropha curcas promote growth of maize
Santosh Ranjan Mohanty, Garima Dubey, Bharati Kollah
Rhizosphere.2017; 3: 20. CrossRef - Colonization and Maize Growth Promotion Induced by Phosphate Solubilizing Bacterial Isolates
Yongbin Li, Xiaomeng Liu, Tianyi Hao, Sanfeng Chen
International Journal of Molecular Sciences.2017; 18(7): 1253. CrossRef - Regulations of essential amino acids and proteomics of bacterial endophytes Sphingomonas sp. Lk11 during cadmium uptake
Abdul Latif Khan, Ihsan Ullah, Javid Hussain, Sang‐Mo Kang, Ahmed Al‐Harrasi, Ahmed Al‐Rawahi, In‐Jung Lee
Environmental Toxicology.2016; 31(7): 887. CrossRef - Native Phytoremediation Potential of Urtica dioica for Removal of PCBs and Heavy Metals Can Be Improved by Genetic Manipulations Using Constitutive CaMV 35S Promoter
Jitka Viktorova, Zuzana Jandova, Michaela Madlenakova, Petra Prouzova, Vilem Bartunek, Blanka Vrchotova, Petra Lovecka, Lucie Musilova, Tomas Macek, Pankaj Kumar Arora
PLOS ONE.2016; 11(12): e0167927. CrossRef - The biosynthesis of gibberellic acids by the transformants of orchid-associated Fusarium oxysporum
Elena A. Tsavkelova
Mycological Progress.2016;[Epub] CrossRef - Dendrobium nobile Lindl. seed germination in co-cultures with diverse associated bacteria
Elena A. Tsavkelova, Maria A. Egorova, Maria R. Leontieva, Sophie G. Malakho, Galina L. Kolomeitseva, Alexander I. Netrusov
Plant Growth Regulation.2016; 80(1): 79. CrossRef - Diversity of indigenous endophytic bacteria associated with the roots of Chinese cabbage (Brassica campestris L.) cultivars and their antagonism towards pathogens
Md. Azizul Haque, Han Dae Yun, Kye Man Cho
Journal of Microbiology.2016; 54(5): 353. CrossRef - Plant growth-promoting effects of rhizospheric and endophytic bacteria associated with different tomato cultivars and new tomato hybrids
Gennaro Roberto Abbamondi, Giuseppina Tommonaro, Nele Weyens, Sofie Thijs, Wouter Sillen, Panagiotis Gkorezis, Carmine Iodice, Wesley de Melo Rangel, Barbara Nicolaus, Jaco Vangronsveld
Chemical and Biological Technologies in Agriculture.2016;[Epub] CrossRef - A Complex Molecular Interplay of Auxin and Ethylene Signaling Pathways Is Involved in Arabidopsis Growth Promotion by Burkholderia phytofirmans PsJN
María J. Poupin, Macarena Greve, Vicente Carmona, Ignacio Pinedo
Frontiers in Plant Science.2016;[Epub] CrossRef - Crop management as a driving force of plant growth promoting rhizobacteria physiology
Juliana Melo, Manuela Carolino, Luís Carvalho, Patrícia Correia, Rogério Tenreiro, Sandra Chaves, Ana I. Meleiro, Sávio B. de Souza, Teresa Dias, Cristina Cruz, Alessandro C. Ramos
SpringerPlus.2016;[Epub] CrossRef - Culturable endophytic bacteria associated with medicinal plant Ferula songorica: molecular phylogeny, distribution and screening for industrially important traits
Yong-Hong Liu, Jian-Wei Guo, Nimaichand Salam, Li Li, Yong-Guang Zhang, Jian Han, Osama Abdalla Mohamad, Wen-Jun Li
3 Biotech.2016;[Epub] CrossRef - Role of Plant Growth Promoting Rhizobacteria in Agricultural Sustainability—A Review
Pravin Vejan, Rosazlin Abdullah, Tumirah Khadiran, Salmah Ismail, Amru Nasrulhaq Boyce
Molecules.2016; 21(5): 573. CrossRef - Response of leaf endophytic bacterial community to elevated CO2 at different growth stages of rice plant
Gaidi Ren, Huayong Zhang, Xiangui Lin, Jianguo Zhu, Zhongjun Jia
Frontiers in Microbiology.2015;[Epub] CrossRef - Diversity and distribution of endophytic bacterial community in the Noni (Morinda citrifolia L.) plant
Liu Yang, Li Yinhu, Yao Su, Wang Hui, Cao Yanhua, Li Jie, Bai Feirong, Qiu Chuangzhao, Feng Xin, Dai Wenkui, Cheng Chi
African Journal of Microbiology Research.2015; 9(25): 1649. CrossRef - Indole: a signaling molecule or a mere metabolic byproduct that alters bacterial physiology at a high concentration?
Jisun Kim, Woojun Park
Journal of Microbiology.2015; 53(7): 421. CrossRef - Endophytic bacteria (Sphingomonassp. LK11) and gibberellin can improveSolanum lycopersicumgrowth and oxidative stress under salinity
Boshra Ahmed Halo, Abdul Latif Khan, Muhammad Waqas, Ahmed Al-Harrasi, Javid Hussain, Liaqat Ali, Muhammad Adnan, In-Jung Lee
Journal of Plant Interactions.2015; 10(1): 117. CrossRef
Reviews
- MINIREVIEW] The therapeutic applications of antimicrobial peptides (AMPs): a patent review
-
Hee-Kyoung Kang , Cheolmin Kim , Chang Ho Seo , Yoonkyung Park
-
J. Microbiol. 2017;55(1):1-12. Published online December 30, 2016
-
DOI: https://doi.org/10.1007/s12275-017-6452-1
-
-
51
View
-
0
Download
-
270
Crossref
-
Abstract
-
Antimicrobial peptides (AMPs) are small molecules with a
broad spectrum of antibiotic activities against bacteria, yeasts,
fungi, and viruses and cytotoxic activity on cancer cells, in
addition to anti-inflammatory and immunomodulatory activities.
Therefore, AMPs have garnered interest as novel therapeutic
agents. Because of the rapid increase in drug-resistant
pathogenic microorganisms, AMPs from synthetic and
natural sources have been developed using alternative antimicrobial
strategies. This article presents a broad analysis of
patents referring to the therapeutic applications of AMPs since
2009. The review focuses on the universal trends in the effective
design, mechanism, and biological evolution of AMPs.
-
Citations
Citations to this article as recorded by

- Boc‐Protected Phenylalanine and Tryptophan‐Based Dipeptides: A Broad Spectrum Anti‐Bacterial Agent
Arpita Halder, Ravikumar Pasupuleti, Subramaniyam Sivagnanam, Priyadip Das, Oindrilla Mukherjee
Biopolymers.2025;[Epub] CrossRef - Detection of antibacterial peptides in artisanal rennet and evaluation of their antibacterial activity
Angela Michela Immacolata Montone, Sara Elsa Aita, Federico Capuano, Angelo Citro, Alessandra Esposito, Alfonso Gallo, Morena Nappa, Enrico Taglioni, Carmela Maria Montone
International Dairy Journal.2025; 160: 106074. CrossRef - Green approaches for biofilm eradication: Enhancing cleaning efficiency
Samah Mechmechani, Piyush Kumar Jha, Layal Karam, Heni Dallagi
Journal of Food Safety.2024;[Epub] CrossRef - Combined release of LL37 peptide and zinc ion from a mussel-inspired coating on porous titanium for infected bone defect repairing
Yanni Zhang, Na Sun, Fangfang Hu, Wenhui Zhang, Qian Gao, Que Bai, Caiyun Zheng, Qiang Chen, Yong Han, Tingli Lu
Colloids and Surfaces B: Biointerfaces.2024; 244: 114181. CrossRef - Engineering Short Antimicrobial Peptides to Specifically Target Fusobacterium nucleatum in the Mixed Microbial Population
Zhao Liu, Yijie Wang, Chen Zhang, Yongshuai Yang, Junfeng Zhang
ACS Infectious Diseases.2024; 10(8): 3042. CrossRef - Novel non-helical antimicrobial peptides insert into and fuse lipid model membranes
Saheli Mitra, Bhairavi Chandersekhar, Yunshu Li, Mark Coopershlyak, Margot E. Mahoney, Brandt Evans, Rachel Koenig, Stephen C. L. Hall, Beate Klösgen, Frank Heinrich, Berthony Deslouches, Stephanie Tristram-Nagle
Soft Matter.2024; 20(20): 4088. CrossRef - Molecular characterization, antibacterial and immunoregulatory activities of liver-expressed antimicrobial peptide 2 in black rockfish, Sebastes schlegelii
Min Zhang, Xue Yan, Chang-biao Wang, Wen-qing Liu, Yue Wang, Hao Jing, Bing Wang, Kai Yang, Zi-yue Chen, Yu-yu Luan, Guang-hua Wang
Fish & Shellfish Immunology.2024; 147: 109467. CrossRef - Local Drug Delivery Systems as Novel Approach for Controlling NETosis in Periodontitis
Adina Bianca Boșca, Elena Dinte, Carmen Mihaela Mihu, Alina Elena Pârvu, Carmen Stanca Melincovici, Alina Simona Șovrea, Mariana Mărginean, Anne-Marie Constantin, Anida-Maria Băbțan, Alexandrina Muntean, Aranka Ilea
Pharmaceutics.2024; 16(9): 1175. CrossRef - Converging frontiers in cancer treatment: the role of nanomaterials, mesenchymal stem cells, and microbial agents—challenges and limitations
Hamed Afkhami, Aref Yarahmadi, Shoroq Bostani, Nahid Yarian, Mahdieh Sadat Haddad, Shima Sadat Lesani, Seyed Soheil Aghaei, Mohammad Reza Zolfaghari
Discover Oncology.2024;[Epub] CrossRef - Chiral nanosystem and chiral supraparticles for drug delivery: an expert opinion
Mahfoozur Rahman, Janhvi Singh, Alhussain Aodah, Majed Alrobaian, Nabil K Alruwaili, Waleed H Almalki, Salem Salman Almujri, Safia Obaidur Rab, Osama A. Madkhali, Ankit Sahoo, Jonathan A Lal
Expert Opinion on Drug Delivery.2024; : 1. CrossRef - Efficacy of a mouthwash containing ε-poly-L-lysine, funme peptides and domiphen in reducing halitosis and supragingival plaque: a randomized clinical trial
Song Shen, Xu Liu, Jun Huang, Yi Sun, Bin Liu, Wenzhu Song, Lei Meng, Mi Du, Qiang Feng
BMC Oral Health.2024;[Epub] CrossRef - Rational Design of Amphipathic Antimicrobial Peptides with Alternating L-/D-Amino Acids That Form Helical Structures
Motoharu Hirano, Hidetomo Yokoo, Nobumichi Ohoka, Takahito Ito, Takashi Misawa, Makoto Oba, Takao Inoue, Yosuke Demizu
Chemical and Pharmaceutical Bulletin.2024; 72(2): 149. CrossRef - Synthetic Antimicrobial Peptides Fail to Induce Leucocyte Innate Immune Functions but Elicit Opposing Transcriptomic Profiles in European Sea Bass and Gilthead Seabream
Laura Cervera, Elena Chaves-Pozo, Alberto Cuesta
Marine Drugs.2024; 22(2): 86. CrossRef - Three hepcidins from the spotted knifejaw (Oplegnathus punctatus) promote antimicrobial activity via TLR/NFκB pathway
Jie Wang, Yadong Chen, Yu Song, Wenteng Xu, Wensheng Li, Wenhui Ma, Chuanjun Yang, Zhangfan Chen, Songlin Chen
Fish & Shellfish Immunology.2024; 154: 109958. CrossRef - Combating antibiotic resistance in a one health context: a plethora of frontiers
Daniel Jesuwenu Ajose, Abimbola Olumide Adekanmbi, Nor Fadhilah Kamaruzzaman, Collins Njie Ateba, Shamsaldeen Ibrahim Saeed
One Health Outlook.2024;[Epub] CrossRef - A review on Diversity, Mechanism of Action and Evolutionary Significance of Antimicrobial Peptides
Noor Muhammad, Waiza Ansar, Arif Ullah, Iram Liaqat, Zahid Nazir
Futuristic Biotechnology.2024; : 02. CrossRef - Protective effects of Chinese bayberry pomace wine against oxidative stress on Drosophila melanogaster
Yanyun Zhu, Mengting Wang, Jingjing Zhu, Xiayin Zhang, Xingqian Ye, Jianchu Chen
Food Research International.2024; 194: 114885. CrossRef - In silico and physico-chemical characterization of cluster formation dynamics in peptide solutions
Dimitar Kaynarov, Karina Marinova, Rossitsa Marinova, Peicho Petkov, Lyudmila Velkova, Aleksandar Dolashki, Petar Petrov, Leandar Litov, Elena Lilkova, Pavlina Dolashka, Nevena Ilieva
Biochemistry and Biophysics Reports.2024; 39: 101753. CrossRef - Chensinin-1b Alleviates DSS-Induced Inflammatory Bowel Disease by Inducing Macrophage Switching from the M1 to the M2 Phenotype
Yue Sun, Huiyu Li, Xingpeng Duan, Xiaoxiao Ma, Chenxi Liu, Dejing Shang
Biomedicines.2024; 12(2): 345. CrossRef - Oral administration of anti-lipopolysaccharide factor isoform 3 via the bait microalga for controlling bacterial infection of Atlantic Bay scallop (Argopecten irradians)
Yulin Cui, Ping Liu, Yaping Shao, Fengjie Sun, Qiaolei Wang, Hao Zhang, Yan Cheng, Zhengquan Gao
Aquaculture Reports.2024; 39: 102430. CrossRef - Mechanistic insights on the antibiofilm potential of snake venom peptides: An in silico based molecular docking approach
Moupriya Nag
Biocatalysis and Agricultural Biotechnology.2024; 61: 103351. CrossRef - Antimicrobial Peptides and Their Biomedical Applications: A Review
Ki Ha Min, Koung Hee Kim, Mi-Ran Ki, Seung Pil Pack
Antibiotics.2024; 13(9): 794. CrossRef - Nano-strategies used for combatting the scourge of tuberculosis infections
Ren Fang, Yubao Jin, Weihao Kong, Hui Wang, Shuxian Wang, Xiaotian Li, Jiayin Xing, Yumiao Zhang, Xingyue Yang, Ningning Song
Discover Immunity.2024;[Epub] CrossRef - Antimicrobial Peptide Screening for Designing Custom Bactericidal Hydrogels
Matthias Recktenwald, Muskanjot Kaur, Mohammed M. Benmassaoud, Aryanna Copling, Tulika Khanna, Michael Curry, Dennise Cortes, Gilbert Fleischer, Valerie J. Carabetta, Sebastián L. Vega
Pharmaceutics.2024; 16(7): 860. CrossRef - Hepcidin and dicentracin peptides show preventive antiviral applications against NNV infection in European sea bass through immunomodulatory roles
Laura Cervera, Marta Arizcun, Luis Mercado, Elena Chaves-Pozo, Alberto Cuesta
Aquaculture.2024; 583: 740592. CrossRef - Natural Antimicrobial Peptides and Their Synthetic Analogues for Effective Oral Microflora Control and Oral Infection Treatment—The Role of Ceragenins in the Development of New Therapeutic Methods
Michał Czarnowski, Urszula Wnorowska, Milena Łuckiewicz, Ewelina Dargiewicz, Jakub Spałek, Sławomir Okła, Beata Sawczuk, Paul B. Savage, Robert Bucki, Ewelina Piktel
Pharmaceuticals.2024; 17(12): 1725. CrossRef - A Novel Beta-Defensin Isoform from Malabar Trevally, Carangoides malabaricus (Bloch & Schneider, 1801), an Arsenal Against Fish Bacterial Pathogens: Molecular Characterization, Recombinant Production, and Mechanism of Action
Athira P. P., Anju M. V., Anooja V. V., Archana K., Neelima S., Muhammed Musthafa S., I. S. Bright Singh, Rosamma Philip
Marine Biotechnology.2024; 26(4): 696. CrossRef - Daidzein‐Based Amphiphilic Small Molecular Antimicrobial Peptidomimetics as Novel Antimicrobial Agents with Anti‐Biofilm Activity
Zijian Hong, Tsz Tin Yu, Muhammad Yasir, Manjulatha Sara, David StC Black, Mark DP Willcox, Rajesh Kuppusamy, Naresh Kumar
ChemistrySelect.2024;[Epub] CrossRef - Development strategies and application of antimicrobial peptides as future alternatives to in-feed antibiotics
Qingping Liang, Zhemin Liu, Ziyu Liang, Changliang Zhu, Dongyu Li, Qing Kong, Haijin Mou
Science of The Total Environment.2024; 927: 172150. CrossRef - Functional interplay between short antimicrobial peptides and model lipid membranes
Lorena Gratino, Marta Gogliettino, Marco Balestrieri, Alessandra Porritiello, Principia Dardano, Bruno Miranda, Rosa Luisa Ambrosio, Monica Ambrosio, Luigi Nicolais, Gianna Palmieri
Bioorganic Chemistry.2024; 153: 107939. CrossRef - Improving Photocleavage Efficiency of Photocleavable Protein for
Antimicrobial Peptide Histatin 1 Expression
Nana Zhou, Tai An, Yuan Zhang, Guomiao Zhao, Chao Wei, Xuemei Shen, Fan Li, Xiaoyan Wang
Protein & Peptide Letters.2024; 31(2): 141. CrossRef -
In silico
approach revealed the membrane receptor PHO36 as a new target for synthetic anticandidal peptides
Francisco ES Lopes, Pedro FN Souza, Daiane MS Brito, Felipe P Mesquita, Raquel C Montenegro, Jackson L Amaral, José HA Filho, Valder N Freire, Rossana A Cordeiro
Future Microbiology.2024; 19(17): 1463. CrossRef - Interaction of designed cationic antimicrobial peptides with the outer membrane of gram-negative bacteria
Shelley He, Charles M. Deber
Scientific Reports.2024;[Epub] CrossRef - Artificial Intelligence-Based Model for Predicting the Minimum Inhibitory Concentration of Antibacterial Peptides Against ESKAPEE Pathogens
Ritesh Sharma, Sameer Shrivastava, Sanjay Kumar Singh, Abhinav Kumar, Amit Kumar Singh, Sonal Saxena
IEEE Journal of Biomedical and Health Informatics.2024; 28(4): 1949. CrossRef - Synergistic peptide combinations designed to suppress SARS-CoV-2
Tao Han, Linhong Song, Xinxin Niu, Meng Qiu, Yi Wang, Jing Wang, Xiuyan Sun, Jiali Ma, Siqi Hu, Zhichun Feng
Heliyon.2024; 10(9): e30489. CrossRef - Synthesis and Biological Studies of New Temporin A Analogs Containing Unnatural Amino Acids in Position 7
Dilyana Dimitrova, Veronica Nemska, Tsvetelina Foteva, Ivan Iliev, Nelly Georgieva, Dancho Danalev
Pharmaceutics.2024; 16(6): 716. CrossRef - PACAP sequence modifications modulate the peptide antimicrobial activity against bacterial pathogens affecting aquaculture
Laura Rivera Méndez, Tania Rodríguez-Cornejo, Tania Rodríguez-Ramos, Lowia Al-Hussinee, Janet Velázquez, James Hugh Campbell, Yamila Carpio, Mario Pablo Estrada, Brian Dixon
Fish & Shellfish Immunology.2024; 148: 109512. CrossRef - Antimicrobial and immunomodulatory activities of porcine cathelicidin Protegrin-1
Ali Javed, Trishana Oedairadjsingh, Irene S. Ludwig, Thomas M. Wood, Nathaniel I. Martin, Femke Broere, Markus H. Weingarth, Edwin J.A. Veldhuizen
Molecular Immunology.2024; 173: 100. CrossRef - Antimicrobial Peptides: Sources, Expression Systems, and Applications
Mengru Li, Weitao Lu, Yanyan Sun, Chunming Dong
Current Protein & Peptide Science.2023; 24(8): 640. CrossRef - Operative Management of Burns: Traditional Care
David G. Greenhalgh
European Burn Journal.2023; 4(2): 262. CrossRef - Antimicrobial Peptides
Noorul Samsoon Maharifa Haja Mohaideen, S. Vaani, S. Hemalatha
Current Pharmacology Reports.2023; 9(6): 433. CrossRef - Advances in Research on Titanium and Titanium Alloys with Antibacterial Functionality for Medical Use—A Review
Yong Shen, Zhankui Jin, Ming Ling, Zhengming Sun, Min Feng, Cuixiang Xu, Shizhang Liu
Journal of Biomaterials and Tissue Engineering.2023; 13(1): 1. CrossRef - An active domain SA-2 derived from cystatin-SA, and its antifungal activity
Xiaoyun Liu, Xiaowei Huang, Jian Wang, Meina Zhang, Mengyuan Liu, Changlin Zhou, Lingman Ma
Amino Acids.2023; 55(1): 101. CrossRef - Diversity of Bioinspired Hydrogels: From Structure to Applications
Alexandra Lupu, Luiza Madalina Gradinaru, Vasile Robert Gradinaru, Maria Bercea
Gels.2023; 9(5): 376. CrossRef - Bioactive peptides derived from fermented foods: Preparation and biological activities
Qingyan Guo, Pengfei Chen, Xianggui Chen
Journal of Functional Foods.2023; 101: 105422. CrossRef - Anti-microbial Peptides against Methicillin-resistant Staphylococcus
aureus: Promising Therapeutics
Priyanka Sinoliya, Pooran Singh Solanki, Sakshi Piplani, Ravi Ranjan Kumar Niraj, Vinay Sharma
Current Protein & Peptide Science.2023; 24(2): 156. CrossRef - Natural and synthetic peptides in antimicrobial therapy
Karina A. Khlystova, Narine G. Sarkisyan, Natalia N. Kataeva
Russian Journal of Immunology.2023; 26(2): 105. CrossRef - Biomimetic antimicrobial polymers—Design, characterization, antimicrobial, and novel applications
Haruko Takahashi, Iva Sovadinova, Kazuma Yasuhara, Satyavani Vemparala, Gregory A. Caputo, Kenichi Kuroda
WIREs Nanomedicine and Nanobiotechnology.2023;[Epub] CrossRef - Antimicrobial peptides: Structure, mechanism, and modification
Na Chen, Cheng Jiang
European Journal of Medicinal Chemistry.2023; 255: 115377. CrossRef - Repairing the intestinal mucosal barrier of traditional Chinese medicine for ulcerative colitis: a review
Yichen Zong, Jie Meng, Tangyou Mao, Qiang Han, Peng Zhang, Lei Shi
Frontiers in Pharmacology.2023;[Epub] CrossRef - Advancements, challenges and future perspectives on peptide-based drugs: Focus on antimicrobial peptides
Xiaofang Luo, Huifang Chen, Yannan Song, Zuodong Qin, Lijian Xu, Nongyue He, Yimin Tan, Wubliker Dessie
European Journal of Pharmaceutical Sciences.2023; 181: 106363. CrossRef - Therapeutic Prospection of Animal Venoms-Derived Antimicrobial Peptides against Infections by Multidrug-Resistant Acinetobacter baumannii: A Systematic Review of Pre-Clinical Studies
William Gustavo Lima, Maria Elena de Lima
Toxins.2023; 15(4): 268. CrossRef - Antimicrobial Efficacy and Prevalence of Microcins: Low Molecular Mass Bacteriocins Produced by Escherichia coli
Farzaneh Mohammadzadeh Rostami, Sharareh Moghim, Saeid Javdan, Bahram Nasr Esfahani
International Journal of Peptide Research and Therapeutics.2023;[Epub] CrossRef - Chiral-engineered supraparticles: Emerging tools for drug delivery
Mahfoozur Rahman, Waleed H. Almalki, Obaid Afzal, Abdulmalik Saleh Alfawaz Altamimi, Shehla Nasar Mir Najib Ullah, Md. Abul Barkat, Sarwar Beg
Drug Discovery Today.2023; 28(1): 103420. CrossRef - In Vitro Biological Evaluation and Mechanism of Action of Peptoid Analogue Based on Cationic, Amphipathic Peptide A-12
Lalita Sharma, Gopal Singh Bisht
International Journal of Peptide Research and Therapeutics.2023;[Epub] CrossRef - Recombinant production of human antimicrobial peptide LL- 37 and its secondary structure
Antonín Pavelka, Lukáš Vacek, Adam Norek, Šárka Kobzová, Lubomír Janda
Biologia.2023; 79(1): 263. CrossRef - Synergistic Effect, Improved Cell Selectivity, and Elucidating the Action Mechanism of Antimicrobial Peptide YS12
Suzia Aktar Suchi, Dae Young Lee, Young Kyun Kim, Seong Soo Kang, Tahmina Bilkis, Jin Cheol Yoo
International Journal of Molecular Sciences.2023; 24(17): 13522. CrossRef - Dual-action potential of cationic cryptides against infections and cancers
Amr A.A. Abd El-Aal, Fairen A. Jayakumar, Kavita Reginald
Drug Discovery Today.2023; 28(11): 103764. CrossRef - Natural Amphibian-Derived Host Defense Peptides: Peptide Immunomodulators
with Potential Therapeutic Value
Jie Shi, Jing Wu, Guizhu Feng, Hailong Yang, Lixian Mu
Protein & Peptide Letters.2023; 30(7): 562. CrossRef - Self-assembled and Zn(II)-coordinated dipeptide nanoparticles with membrane-rupturing action on bacteria
Shahzad Anwar, Muhammad Babar Khawar, Ali Afzal, Muhammad Ovais, Zhang Xiang
Applied Microbiology and Biotechnology.2023; 107(18): 5775. CrossRef - Therapeutic Peptides for Treatment of Lung Diseases: Infection, Fibrosis, and Cancer
Shujiao Li, Yuying Li, Ying Liu, Yifan Wu, Qiuyu Wang, Lili Jin, Dianbao Zhang
International Journal of Molecular Sciences.2023; 24(10): 8642. CrossRef - The biological role of charge distribution in linear antimicrobial peptides
Harry Morales Duque, Gisele Rodrigues, Lucas Souza Santos, Octávio Luiz Franco
Expert Opinion on Drug Discovery.2023; 18(3): 287. CrossRef - Colitis-Mediated Dysbiosis of the Intestinal Flora and Impaired Vitamin A Absorption Reduce Ovarian Function in Mice
Ze Li, Chengzhen Chen, Wenjie Yu, Lingxia Xu, Haitao Jia, Chen Wang, Na Pei, Zibin Liu, Dan Luo, Jun Wang, Wenfa Lv, Bao Yuan, Jiabao Zhang, Hao Jiang
Nutrients.2023; 15(11): 2425. CrossRef - Insect Meals and Insect Antimicrobial Peptides as an Alternative for Antibiotics and Growth Promoters in Livestock Production
Ewelina Patyra, Krzysztof Kwiatek
Pathogens.2023; 12(6): 854. CrossRef - Simultaneous control of infection and inflammation with keratin-derived antibacterial peptides targeting TLRs and co-receptors
Yan Sun, Jonathan Chan, Karthikeyan Bose, Connie Tam
Science Translational Medicine.2023;[Epub] CrossRef - Structural Characterization, Functional Profiling, and Mechanism Study of Four Antimicrobial Peptides for Antibacterial and Anticancer Applications
Zihuayuan Yang, Jie Zhang, Fu-Gen Wu, Fengming Lin
Langmuir.2023; 39(6): 2161. CrossRef - Enhancement of hypericin nanoparticle-mediated sonoinduced disruption of biofilm and persister cells of Streptococcus mutans by dermcidin-derived peptide DCD-1L
Maryam Pourhajibagher, Steven Parker, Babak Pourakbari, Nasrin Keshavarz Valian, Reza Raoofian, Abbas Bahador
Photodiagnosis and Photodynamic Therapy.2023; 41: 103308. CrossRef - Biomimetic AgNPs@antimicrobial peptide/silk fibroin coating for infection-trigger antibacterial capability and enhanced osseointegration
Wenhao Zhou, Tian Bai, Lan Wang, Yan Cheng, Dandan Xia, Sen Yu, Yufeng Zheng
Bioactive Materials.2023; 20: 64. CrossRef - Preparation, Purification and Characterization of Antibacterial and ACE Inhibitory Peptides from Head Protein Hydrolysate of Kuruma Shrimp, Marsupenaeus japonicus
Jie Zhou, Qiuyu Han, Tomoyuki Koyama, Shoichiro Ishizaki
Molecules.2023; 28(2): 894. CrossRef - Brevicillin, a novel lanthipeptide from the genusBrevibacilluswith antimicrobial, antifungal, and antiviral activity
Shelley Sardul Singh, Deepika Sharma, Charandeep Singh, Sahil Kumar, Prashant Singh, Anshul Sharma, Deepjyoti Kumar Das, Anil Kumar Pinnaka, Krishan Gopal Thakur, Rajesh P Ringe, Suresh Korpole
Journal of Applied Microbiology.2023;[Epub] CrossRef - Fungicidal activity of human antimicrobial peptides and their synergistic interaction with common antifungals against multidrug-resistant Candida auris
Siham Shaban, Mrudula Patel, Aijaz Ahmad
International Microbiology.2022; 26(2): 165. CrossRef - Aptamer Decorated Emodin Nanoparticles-Assisted Delivery of Dermcidin-Derived Peptide DCD-1L: Photoactive Bio-Theragnostic Agent for Enterococcus Faecalis Biofilm Destruction
Maryam Pourhajibagher, Abbas Bahador
SSRN Electronic Journal .2022;[Epub] CrossRef - Aptamer decorated emodin nanoparticles-assisted delivery of dermcidin-derived peptide DCD-1L: Photoactive bio-theragnostic agent for Enterococcus faecalis biofilm destruction
Maryam Pourhajibagher, Abbas Bahador
Photodiagnosis and Photodynamic Therapy.2022; 39: 103020. CrossRef - Production of Antimicrobial Peptides (Cathelicidin Analogues) and Evaluation of Their Biological Properties
V. A. Gasanov, E. A. Vorotelyak, A. V. Vasiliev
Biology Bulletin.2022; 49(S2): S148. CrossRef - Progress in Alternative Strategies to Combat Antimicrobial Resistance: Focus on Antibiotics
Jayaseelan Murugaiyan, P. Anand Kumar, G. Srinivasa Rao, Katia Iskandar, Stephen Hawser, John P. Hays, Yara Mohsen, Saranya Adukkadukkam, Wireko Andrew Awuah, Ruiz Alvarez Maria Jose, Nanono Sylvia, Esther Patience Nansubuga, Bruno Tilocca, Paola Roncada,
Antibiotics.2022; 11(2): 200. CrossRef - Strategies for improving antimicrobial peptide production
Soumya Deo, Kristi L. Turton, Tajinder Kainth, Ayush Kumar, Hans-Joachim Wieden
Biotechnology Advances.2022; 59: 107968. CrossRef - Riemerella anatipestifer T9SS Effector SspA Functions in Bacterial Virulence and Defending Natural Host Immunity
Zongchao Chen, Pengfei Niu, Xiaomei Ren, Wenlong Han, Ruyu Shen, Min Zhu, Yang Yu, Chan Ding, Shengqing Yu, Martha Vives
Applied and Environmental Microbiology.2022;[Epub] CrossRef - Antibacterial and Antibiofilm Activities of Novel Cyclic Peptides against Methicillin-Resistant Staphylococcus aureus
Guoxing Wei, Yun He
International Journal of Molecular Sciences.2022; 23(14): 8029. CrossRef - Effect of Flagellin Pre-Exposure on the Inflammatory and Antifungal Response of Bronchial Epithelial Cells to Fungal Pathogens
Jeanne Bigot, Manon Ruffin, Juliette Guitard, Sandra Vellaissamy, Sophie Thorez, Harriet Corvol, Loïc Guillot, Viviane Balloy, Christophe Hennequin
Journal of Fungi.2022; 8(12): 1268. CrossRef - Gold nanoparticle-DNA aptamer-assisted delivery of antimicrobial peptide effectively inhibits Acinetobacter baumannii infection in mice
Jaeyeong Park, Eunkyoung Shin, Ji-Hyun Yeom, Younkyung Choi, Minju Joo, Minho Lee, Je Hyeong Kim, Jeehyeon Bae, Kangseok Lee
Journal of Microbiology.2022; 60(1): 128. CrossRef - Antimicrobial peptides (AMPs): A promising class of antimicrobial compounds
Mine Erdem Büyükkiraz, Zülal Kesmen
Journal of Applied Microbiology.2022; 132(3): 1573. CrossRef - Novel Insights into Fungal Infections Prophylaxis and Treatment in Pediatric Patients with Cancer
Gianluca Bossù, Riccardo Di Sario, Edoardo Muratore, Davide Leardini, Andrea Pession, Susanna Esposito, Riccardo Masetti
Antibiotics.2022; 11(10): 1316. CrossRef - Pathogen-Specific Bactericidal Method Mediated by Conjugative Delivery of CRISPR-Cas13a Targeting Bacterial Endogenous Transcripts
Zihao Song, Yue Yu, Xinpeng Bai, Yiguo Jia, Jiayi Tian, Kui Gu, Mengyu Zhao, Changyu Zhou, Xiangyu Zhang, Hongning Wang, Yizhi Tang, Sandeep Tamber
Microbiology Spectrum.2022;[Epub] CrossRef - Role of lipopolysaccharide in antimicrobial and cell penetrating peptide membrane interactions probed by deuterium NMR of whole cells
Sarika Kumari, Michael R. Morrow, Valerie Booth
BBA Advances.2022; 2: 100057. CrossRef - Multidrug-Resistant Microbial Therapy Using Antimicrobial Peptides and the CRISPR/Cas9 System
Yared Abate Getahun, Destaw Asfaw Ali, Bihonegn Wodajnew Taye, Yismaw Alemie Alemayehu
Veterinary Medicine: Research and Reports.2022; Volume 13: 173. CrossRef - Pulmonary surfactant and drug delivery: Vehiculization of a tryptophan-tagged antimicrobial peptide over the air-liquid interfacial highway
Cristina García-Mouton, Elisa Parra-Ortiz, Martin Malmsten, Antonio Cruz, Jesús Pérez-Gil
European Journal of Pharmaceutics and Biopharmaceutics.2022; 180: 33. CrossRef - Production of antimicrobial peptide arasin-like Sp in Escherichia coli via an ELP-intein self-cleavage system
Xiu Li, Yu Jiang, Ying Lin
Journal of Biotechnology.2022; 347: 49. CrossRef - Review and perspective on bioactive peptides: A roadmap for research, development, and future opportunities
Zhenjiao Du, Yonghui Li
Journal of Agriculture and Food Research.2022; 9: 100353. CrossRef - Human Antimicrobial Peptide Triggered Colloidal Transformations in Bacteria Membrane Lipopolysaccharides
Linda Hong, Mark Gontsarik, Heinz Amenitsch, Stefan Salentinig
Small.2022;[Epub] CrossRef - Combination of Six Individual Derivatives of the Pom-1 Antibiofilm Peptide Doubles Their Efficacy against Invasive and Multi-Resistant Clinical Isolates of the Pathogenic Yeast Candida albicans
Michelle Häring, Valerie Amann, Ann-Kathrin Kissmann, Tilmann Herberger, Christopher Synatschke, Nicole Kirsch-Pietz, Julio A. Perez-Erviti, Anselmo J. Otero-Gonzalez, Fidel Morales-Vicente, Jakob Andersson, Tanja Weil, Steffen Stenger, Armando Rodríguez,
Pharmaceutics.2022; 14(7): 1332. CrossRef - Pathophysiological Effects of Lycosa erythrognatha Derived Peptide LyeTxI-b on RKO-AS-45-1 Colorectal Carcinoma Cell Line Using the Chicken Chorioallantoic Membrane Model
Carolina Nunes da Silva, Lays Fernanda Nunes Dourado, Luciana Maria Silva, Aline Brito de Lima, Maria Elena de Lima, Armando Silva-Cunha, Silvia Ligório Fialho
International Journal of Peptide Research and Therapeutics.2022;[Epub] CrossRef - Effect of a monovalent salt on the energetics of an antimicrobial-peptide: micelle dissociation
Suvankar Ghosh, Sunanda Chatterjee, Priyadarshi Satpati
Physical Chemistry Chemical Physics.2022; 24(38): 23669. CrossRef - Synthetic Amphipathic β-Sheet Temporin-Derived Peptide with Dual Antibacterial and Anti-Inflammatory Activities
Rosa Bellavita, Elisabetta Buommino, Bruno Casciaro, Francesco Merlino, Floriana Cappiello, Noemi Marigliano, Anella Saviano, Francesco Maione, Rosaria Santangelo, Maria Luisa Mangoni, Stefania Galdiero, Paolo Grieco, Annarita Falanga
Antibiotics.2022; 11(10): 1285. CrossRef - Effect of Leu/Val Mutation on the Energetics of Antimicrobial Peptide:Micelle Binding
Suvankar Ghosh, Sunanda Chatterjee, Priyadarshi Satpati
The Journal of Physical Chemistry B.2022; 126(28): 5262. CrossRef - Alternatives Therapeutic Approaches to Conventional Antibiotics: Advantages, Limitations and Potential Application in Medicine
Hiba Alaoui Mdarhri, Rachid Benmessaoud, Houda Yacoubi, Lina Seffar, Houda Guennouni Assimi, Mouhsine Hamam, Rihabe Boussettine, Najoie Filali-Ansari, Fatima Azzahra Lahlou, Idrissa Diawara, Moulay Mustapha Ennaji, Mohamed Kettani-Halabi
Antibiotics.2022; 11(12): 1826. CrossRef - Antimicrobial peptides: natural or synthetic defense peptides against HBV and HCV infections
Masoud Keikha, Hossein Kamali, Kiarash Ghazvini, Mohsen Karbalaei
VirusDisease.2022; 33(4): 445. CrossRef - Immune Activated Cellular Therapy for Drug Resistant Infections: Rationale, Mechanisms, and Implications for Veterinary Medicine
Lynn M. Pezzanite, Lyndah Chow, Alyssa Strumpf, Valerie Johnson, Steven W. Dow
Veterinary Sciences.2022; 9(11): 610. CrossRef - In Vitro Antibacterial Effects of the Chimeric Peptides from Chicken and Pig Antimicrobial Peptide NK-Lysin
Yeojin Hong, Gi Yong Lee, Soo-Jin Yang, Hyun Soon Lillehoj, Yeong Ho Hong
Korean Journal of Poultry Science.2022; 49(2): 69. CrossRef - High Level Expression and Purification of Cecropin-like Antimicrobial Peptides in Escherichia coli
Chih-Lung Wu, Ya-Han Chih, Hsin-Ying Hsieh, Kuang-Li Peng, Yi-Zong Lee, Bak-Sau Yip, Shih-Che Sue, Jya-Wei Cheng
Biomedicines.2022; 10(6): 1351. CrossRef - The antimicrobial peptides LL-37, KR-20, FK-13 and KR-12 inhibit the growth of a sensitive and a metronidazole-resistant strain of Trichomonas vaginalis
María G. Ramírez-Ledesma, Mayra C. Rodríguez, Nayeli Alva-Murillo, Eva E. Avila
Parasitology Research.2022; 121(12): 3503. CrossRef - Fabrication of an Antimicrobial Peptide-Loaded Silk Fibroin/Gelatin Bilayer Sponge to Apply as a Wound Dressing; An In Vitro Study
Milad Chizari, Sadjad Khosravimelal, Hamid Tebyaniyan, Mehrdad Moosazadeh Moghaddam, Mazaher Gholipourmalekabadi
International Journal of Peptide Research and Therapeutics.2022;[Epub] CrossRef - Interaction of a short antimicrobial peptide on charged lipid bilayer: A case study on aurein 1.2 peptide
Shuo Qian, Piotr A. Zolnierczuk
BBA Advances.2022; 2: 100045. CrossRef - The Role of Intestinal Mucosal Barrier in Autoimmune Disease: A Potential Target
Jia An, Yuqing Liu, Yiqi Wang, Ru Fan, Xiaorong Hu, Fen Zhang, Jinhua Yang, Junwei Chen
Frontiers in Immunology.2022;[Epub] CrossRef - Effect of C‐terminal and N‐terminal dimerization and alanine scanning on antibacterial activity of the analogs of the peptide p‐BthTX‐I
Norival Alves Santos‐Filho, Gabriela Marinho Righetto, Marina Rodrigues Pereira, Julia Pinto Piccoli, Larissa Mathias Teizen Almeida, Thainá Cristina Leal, Ilana Lopes Baratella Cunha Camargo, Eduardo Maffud Cilli
Peptide Science.2022;[Epub] CrossRef - Ramosin: The First Antibacterial Peptide Identified on Bolitoglossa ramosi Colombian Salamander
Laura Medina, Fanny Guzmán, Claudio Álvarez, Jean Paul Delgado, Belfran Carbonell-M
Pharmaceutics.2022; 14(12): 2579. CrossRef - Bioactive Antimicrobial Peptides: A New Weapon to Counteract Zoonosis
Luisa Zupin, Carlos André dos Santos-Silva, Aya R. Hamad Al Mughrbi, Livia Maria Batista Vilela, Ana Maria Benko-Iseppon, Sergio Crovella
Microorganisms.2022; 10(8): 1591. CrossRef - Antimicrobial Peptide Mechanisms Studied by Whole-Cell Deuterium NMR
Sarika Kumari, Valerie Booth
International Journal of Molecular Sciences.2022; 23(5): 2740. CrossRef - In silico screening and characterization of novel natural peptides as spike protein inhibitors of novel coronavirus (severe acute respiratory syndrome coronavirus 2)
Raghunath Satpathy, Namrata Dash
Journal of Preventive, Diagnostic and Treatment Strategies in Medicine.2022; 1(1): 54. CrossRef - Key Physicochemical Determinants in the Antimicrobial Peptide RiLK1 Promote Amphipathic Structures
Lucia Falcigno, Gabriella D’Auria, Gianna Palmieri, Marta Gogliettino, Bruna Agrillo, Rosarita Tatè, Principia Dardano, Luigi Nicolais, Marco Balestrieri
International Journal of Molecular Sciences.2021; 22(18): 10011. CrossRef - Cytotoxicity and antimicrobial activity of synthetic peptides alone or in combination with conventional antimicrobials against fish pathogenic bacteria
I.M. Assane, N.A. Santos‐Filho, E.L. Sousa, M.C.O. Arruda Brasil, E.M. Cilli, F. Pilarski
Journal of Applied Microbiology.2021; 131(4): 1762. CrossRef - Integrating Porphyrinic Metal-Organic Frameworks in Nanofibrous Carrier for Photodynamic Antimicrobial Application
Huiru Zhang, Zhihao Xu, Ying Mao, Yingjie Zhang, Yan Li, Jihong Lao, Lu Wang
Polymers.2021; 13(22): 3942. CrossRef - Metal–Organic-Framework-Based Materials for Antimicrobial Applications
Rui Li, Tongtong Chen, Xiangliang Pan
ACS Nano.2021; 15(3): 3808. CrossRef - Polyphenylglyoxamide-Based Amphiphilic Small Molecular Peptidomimetics as Antibacterial Agents with Anti-Biofilm Activity
Tsz Tin Yu, Rajesh Kuppusamy, Muhammad Yasir, Md. Musfizur Hassan, Manjulatha Sara, Junming Ho, Mark D. P. Willcox, David StC. Black, Naresh Kumar
International Journal of Molecular Sciences.2021; 22(14): 7344. CrossRef - Initial purification of antimicrobial fermentation metabolites from Paecilomyces cicadae and its antimicrobial mechanism
Qi-Wen Cen, Zheng-Yun Wang, Zhen-Xing Tang, Yu Zhang, Tao Chen, Da-Wei Xue, Ming-Feng Xu, Xue-Lian Bai, Ting Zhou, Lu-E Shi
LWT.2021; 148: 111785. CrossRef - Deep-ABPpred: identifying antibacterial peptides in protein sequences using bidirectional LSTM with word2vec
Ritesh Sharma, Sameer Shrivastava, Sanjay Kumar Singh, Abhinav Kumar, Sonal Saxena, Raj Kumar Singh
Briefings in Bioinformatics.2021;[Epub] CrossRef - Cutaneous Neuroimmune Interactions in Peripheral Neuropathic Pain States
Daniel B. Lowy, Preet G. S. Makker, Gila Moalem-Taylor
Frontiers in Immunology.2021;[Epub] CrossRef - New Perspectives on Old and New Therapies of Staphylococcal Skin Infections: The Role of Biofilm Targeting in Wound Healing
Oriana Simonetti, Giulio Rizzetto, Giulia Radi, Elisa Molinelli, Oscar Cirioni, Andrea Giacometti, Annamaria Offidani
Antibiotics.2021; 10(11): 1377. CrossRef - Antimicrobial peptides: mechanism of action, activity and clinical potential
Qi-Yu Zhang, Zhi-Bin Yan, Yue-Ming Meng, Xiang-Yu Hong, Gang Shao, Jun-Jie Ma, Xu-Rui Cheng, Jun Liu, Jian Kang, Cai-Yun Fu
Military Medical Research.2021;[Epub] CrossRef - Trends in peptide drug discovery
Markus Muttenthaler, Glenn F. King, David J. Adams, Paul F. Alewood
Nature Reviews Drug Discovery.2021; 20(4): 309. CrossRef - Atomic-engineering Au-Ag nanoalloys for screening antimicrobial agents with low toxicity towards mammalian cells
Zi Lin, Yao Luo, Pengfei Liu, Yanjun Li, Jun Yue, Lelun Jiang
Colloids and Surfaces B: Biointerfaces.2021; 204: 111831. CrossRef - Discovery, Optimization, and Clinical Application of Natural Antimicrobial Peptides
Armando A. Rodríguez, Anselmo Otero-González, Maretchia Ghattas, Ludger Ständker
Biomedicines.2021; 9(10): 1381. CrossRef - Expression of antimicrobial peptide Cecropin P1 in Saccharomyces cerevisiae and its antibacterial and antiviral activity in vitro
Ruijiao Jiang, Pengfei Zhang, Xulong Wu, Yin Wang, Tayyab Rehman, Xueping Yao, Yan Luo, Zexiao Yang
Electronic Journal of Biotechnology.2021; 50: 16. CrossRef - Structure–activity relationship study of amphipathic antimicrobial peptides using helix‐destabilizing sarcosine
Hidetomo Yokoo, Motoharu Hirano, Nobumichi Ohoka, Takashi Misawa, Yosuke Demizu
Journal of Peptide Science.2021;[Epub] CrossRef - The barrier beyond the skin
Elisa MOLITERNI, Giovanni PAOLINO, Antonio G. RICHETTA, Sara GRASSI, Stefano CALVIERI
Italian Journal of Dermatology and Venereology.2021;[Epub] CrossRef - Plant Antimicrobial Peptides as Potential Tool for Topic Treatment of Hidradenitis Suppurativa
Carlos André dos Santos-Silva, Paola Maura Tricarico, Lívia Maria Batista Vilela, Ricardo Salas Roldan-Filho, Vinícius Costa Amador, Adamo Pio d’Adamo, Mireli de Santana Rêgo, Ana Maria Benko-Iseppon, Sergio Crovella
Frontiers in Microbiology.2021;[Epub] CrossRef - Short communication: Algicide activity of antimicrobial peptides compounds against Prototheca bovis
V.R. Sperotto, L.B. Denardi, C. Weiblen, F.P.K. de Jesus, M.R. Dorneles, L.B. Ianiski, J.M. Santurio
Journal of Dairy Science.2021; 104(3): 3554. CrossRef - β-Defensins from common goby (Pomatoschistus microps) and silver trevally (Pseudocaranx georgianus): Molecular characterization and phylogenetic analysis
K. L. Dhanya Lenin, Rajeswary Vasu Iyer, Athira Raveendran, M. V. Anju, Rosamma Philip, Swapna P. Antony
Molecular Biology Reports.2021; 48(5): 4943. CrossRef - Impact of the Peptide WMR-K on Dual-Species Biofilm Candida albicans/Klebsiella pneumoniae and on the Untargeted Metabolomic Profile
Emilia Galdiero, Maria Michela Salvatore, Angela Maione, Federica Carraturo, Stefania Galdiero, Annarita Falanga, Anna Andolfi, Francesco Salvatore, Marco Guida
Pathogens.2021; 10(2): 214. CrossRef - Peptides and Dendrimers: How to Combat Viral and Bacterial Infections
Annarita Falanga, Valentina Del Genio, Stefania Galdiero
Pharmaceutics.2021; 13(1): 101. CrossRef - Antimicrobial peptides and their application in food packaging
Yaowen Liu, Dur E. Sameen, Saeed Ahmed, Jianwu Dai, Wen Qin
Trends in Food Science & Technology.2021; 112: 471. CrossRef - Mechanistic Understanding from Molecular Dynamics in Pharmaceutical Research 2: Lipid Membrane in Drug Design
Tomasz Róg, Mykhailo Girych, Alex Bunker
Pharmaceuticals.2021; 14(10): 1062. CrossRef - Structural Diversity using Hyp “Customizable Units”: Proof‐of‐Concept Synthesis of Sansalvamide‐Related Antitumoral Peptides
Fernando Cuevas, Carlos J. Saavedra, Ivan Romero‐Estudillo, Alicia Boto, Mario Ordóñez, Irene Vergara
European Journal of Organic Chemistry.2021; 2021(6): 933. CrossRef - Therapeutic Strategies To Counteract Antibiotic Resistance in MRSA Biofilm‐Associated Infections
Stella Cascioferro, Daniela Carbone, Barbara Parrino, Camilla Pecoraro, Elisa Giovannetti, Girolamo Cirrincione, Patrizia Diana
ChemMedChem.2021; 16(1): 65. CrossRef - Uncoupling Amphipathicity and Hydrophobicity: Role of Charge Clustering in Membrane Interactions of Cationic Antimicrobial Peptides
Shelley He, Tracy A. Stone, Charles M. Deber
Biochemistry.2021; 60(34): 2586. CrossRef - Preferential binding affinity of ions and their effect on structure and dynamics of water near antimicrobial peptide
Omkar Singh, Debashree Chakraborty
Journal of Molecular Liquids.2021; 344: 117789. CrossRef - Synthesis and Antibacterial Activity of Cationic Amino Acid-Conjugated Dendrimers Loaded with a Mixture of Two Triterpenoid Acids
Anna Maria Schito, Gian Carlo Schito, Silvana Alfei
Polymers.2021; 13(4): 521. CrossRef - Recent Advances and Challenges in Nanodelivery Systems for Antimicrobial Peptides (AMPs)
Ziyan Tang, Quantao Ma, Xiaoling Chen, Tianbao Chen, Yuan Ying, Xinping Xi, Lei Wang, Chengbang Ma, Chris Shaw, Mei Zhou
Antibiotics.2021; 10(8): 990. CrossRef - Rediscovery of antimicrobial peptides as therapeutic agents
Minkyung Ryu, Jaeyeong Park, Ji-Hyun Yeom, Minju Joo, Kangseok Lee
Journal of Microbiology.2021; 59(2): 113. CrossRef - Microfluidic Tools for Enhanced Characterization of Therapeutic Stem Cells and Prediction of Their Potential Antimicrobial Secretome
Pasquale Marrazzo, Valeria Pizzuti, Silvia Zia, Azzurra Sargenti, Daniele Gazzola, Barbara Roda, Laura Bonsi, Francesco Alviano
Antibiotics.2021; 10(7): 750. CrossRef - Chiral self-assembly of peptides: Toward the design of supramolecular polymers with enhanced chemical and biological functions
Yuhe Shen, Yuefei Wang, Ian W. Hamley, Wei Qi, Rongxin Su, Zhimin He
Progress in Polymer Science.2021; 123: 101469. CrossRef - Amphiphilic polymer therapeutics: an alternative platform in the fight against antibiotic resistant bacteria
Haruko Takahashi, Gregory A. Caputo, Kenichi Kuroda
Biomaterials Science.2021; 9(8): 2758. CrossRef - Self-Assembly Pathways and Antimicrobial Properties of Lysozyme in Different Aggregation States
Nico Kummer, Tingting Wu, Kevin J. De France, Flavia Zuber, Qun Ren, Peter Fischer, Silvia Campioni, Gustav Nyström
Biomacromolecules.2021; 22(10): 4327. CrossRef - Effect of Non-natural Hydrophobic Amino Acids on the Efficacy and Properties of the Antimicrobial Peptide C18G
Morgan A. Hitchner, Matthew R. Necelis, Devanie Shirley, Gregory A. Caputo
Probiotics and Antimicrobial Proteins.2021; 13(2): 527. CrossRef - Apoptosis-induction effect of ε-poly-lysine against Staphylococcus aureus and its application on pasteurized milk
Hou-Qi Ning, Ying-Qiu Li, Hong Lin, Jing-Xue Wang
LWT.2021; 137: 110493. CrossRef - Marine Invertebrate Peptides: Antimicrobial Peptides
Ran Wu, Jiri Patocka, Eugenie Nepovimova, Patrik Oleksak, Martin Valis, Wenda Wu, Kamil Kuca
Frontiers in Microbiology.2021;[Epub] CrossRef - Generation of antimicrobial peptides Leg1 and Leg2 from chickpea storage protein, active against food spoilage bacteria and foodborne pathogens
Marie-Louise Heymich, Ulrike Friedlein, Marius Trollmann, Karin Schwaiger, Rainer A. Böckmann, Monika Pischetsrieder
Food Chemistry.2021; 347: 128917. CrossRef - Alternative Therapeutic Interventions: Antimicrobial Peptides and Small Molecules to Treat Microbial Keratitis
Praveen Kumar Jadi, Prerana Sharma, Bharathi Bhogapurapu, Sanhita Roy
Frontiers in Chemistry.2021;[Epub] CrossRef - His-Rich Peptides, Gly- and His-Rich Peptides: Functionally Versatile Compounds with Potential Multi-Purpose Applications
Luiz G. P. Nunes, Thais Reichert, M. Teresa Machini
International Journal of Peptide Research and Therapeutics.2021; 27(4): 2945. CrossRef - Effect of monovalent salt concentration and peptide secondary structure in peptide-micelle binding
Suvankar Ghosh, Gopal Pandit, Swapna Debnath, Sunanda Chatterjee, Priyadarshi Satpati
RSC Advances.2021; 11(58): 36836. CrossRef - Polyalanine peptide variations may have different mechanisms of action against multidrug-resistant bacterial pathogens
Mário R Felício, Gislaine G O S Silveira, Karen G N Oshiro, Beatriz T Meneguetti, Octávio L Franco, Nuno C Santos, Sónia Gonçalves
Journal of Antimicrobial Chemotherapy.2021; 76(5): 1174. CrossRef - Challenge in the Discovery of New Drugs: Antimicrobial Peptides against WHO-List of Critical and High-Priority Bacteria
Cesar Augusto Roque-Borda, Patricia Bento da Silva, Mosar Corrêa Rodrigues, Ricardo Bentes Azevedo, Leonardo Di Filippo, Jonatas L. Duarte, Marlus Chorilli, Eduardo Festozo Vicente, Fernando Rogério Pavan
Pharmaceutics.2021; 13(6): 773. CrossRef - Natural and Synthetic Halogenated Amino Acids—Structural and Bioactive Features in Antimicrobial Peptides and Peptidomimetics
Mario Mardirossian, Marina Rubini, Mauro F. A. Adamo, Marco Scocchi, Michele Saviano, Alessandro Tossi, Renato Gennaro, Andrea Caporale
Molecules.2021; 26(23): 7401. CrossRef - Alleviation of DSS-induced colitisvia Lactobacillus acidophilustreatment in mice
Woon-Ki Kim, Dae Hee Han, You Jin Jang, SungJun Park, Sung Jae Jang, Giljae Lee, Hyuk Seung Han, GwangPyo Ko
Food & Function.2021; 12(1): 340. CrossRef - Antibacterial activity of antimicrobial peptide-conjugated nanofibrous membranes
Günnur Onak, Utku Kürşat Ercan, Ozan Karaman
Biomedical Materials.2021; 16(1): 015020. CrossRef - Stability and Activity of the Antimicrobial Peptide Leg1 in Solution and on Meat and Its Optimized Generation from Chickpea Storage Protein
Marie-Louise Heymich, Showmika Srirangan, Monika Pischetsrieder
Foods.2021; 10(6): 1192. CrossRef - Is it time to reconsider prophylactic antimicrobial use for hematopoietic stem cell transplantation? a narrative review of antimicrobials in stem cell transplantation
Dilshad Jahan, Ed Peile, Md Arif Sheikh, Salequl Islam, Sharlene Parasnath, Paras Sharma, Katia Iskandar, Sameer Dhingra, Jaykaran Charan, Timothy Craig Hardcastle, Nandeeta Samad, Tajkera Sultana Chowdhury, Siddhartha Dutta, Mainul Haque
Expert Review of Anti-infective Therapy.2021; 19(10): 1259. CrossRef - Identifying the Potential Therapeutic Targets for Atopic Dermatitis Through the Immune Infiltration Analysis and Construction of a ceRNA Network
Shixiong Peng, Mengjiao Chen, Ming Yin, Hao Feng
Clinical, Cosmetic and Investigational Dermatology.2021; Volume 14: 437. CrossRef - A novel apidaecin Api-PR19 synergizes with the gut microbial community to maintain intestinal health and promote growth performance of broilers
Shengru Wu, Jian Wang, Liqin Zhu, Hao Ren, Xiaojun Yang
Journal of Animal Science and Biotechnology.2020;[Epub] CrossRef - Dietary effects of antimicrobial peptides in therapeutics
Olalekan Olanrewaju Bakare, Adewale Oluwaseun Fadaka, Ashwil Klein, Ashley Pretorius
All Life.2020; 13(1): 78. CrossRef - Characterization, Cytotoxic Analysis and Action Mechanism of Antilisterial Bacteriocin Produced by Lactobacillus plantarum Isolated from Cheddar Cheese
Fariha Ibrahim, Nadir Naveed Siddiqui, Afsheen Aman, Shah Ali Ul Qader, Asma Ansari
International Journal of Peptide Research and Therapeutics.2020; 26(4): 1751. CrossRef - Positively Charged Polymers as Promising Devices against Multidrug Resistant Gram-Negative Bacteria: A Review
Silvana Alfei, Anna Maria Schito
Polymers.2020; 12(5): 1195. CrossRef - Effects of Peptide Thanatin on the Growth and Transcriptome of Penicillium digitatum
Guirong Feng, Xindan Li, Wenjun Wang, Lili Deng, Kaifang Zeng
Frontiers in Microbiology.2020;[Epub] CrossRef - A novel in silico antimicrobial peptide DP7 combats MDR Pseudomonas aeruginosa and related biofilm infections
Qi Yin, Siwen Wu, Lei Wu, Zhenling Wang, Yandong Mu, Rui Zhang, Chunyan Dong, Bailing Zhou, Binyan Zhao, Jiajun Zheng, Ying Sun, Xingjun Cheng, Li Yang
Journal of Antimicrobial Chemotherapy.2020; 75(11): 3248. CrossRef - β-defensins and the inflammatory periodontal diseases: a systematic review
E. A. Tikhomirova, E. S. Slazhneva, V. G. Atrushkevich
Parodontologiya.2020; 25(4): 276. CrossRef - Strategies to Combat Multidrug-Resistant and Persistent Infectious Diseases
Olga Pacios, Lucia Blasco, Inès Bleriot, Laura Fernandez-Garcia, Mónica González Bardanca, Antón Ambroa, María López, German Bou, Maria Tomás
Antibiotics.2020; 9(2): 65. CrossRef - Ultra-Short Antimicrobial Peptoids Show Propensity for Membrane Activity Against Multi-Drug Resistant Mycobacterium tuberculosis
Jasmeet Singh Khara, Biljana Mojsoska, Devika Mukherjee, Paul R. Langford, Brian D. Robertson, Håvard Jenssen, Pui Lai Rachel Ee, Sandra M. Newton
Frontiers in Microbiology.2020;[Epub] CrossRef - Scorpion-Venom-Derived Antimicrobial Peptide Css54 Exerts Potent Antimicrobial Activity by Disrupting Bacterial Membrane of Zoonotic Bacteria
Jonggwan Park, Jun Hee Oh, Hee Kyoung Kang, Moon-Chang Choi, Chang Ho Seo, Yoonkyung Park
Antibiotics.2020; 9(11): 831. CrossRef - Cationic amphipathic peptide analogs of cathelicidin LL‐37 as a probe in the development of antimicrobial/anticancer agents
Athanasios Tzitzilis, Anastasia Boura‐Theodorou, Vassilios Michail, Stylianos Papadopoulos, Dimitrios Krikorian, Marilena E. Lekka, Anna‐Irini Koukkou, Maria Sakarellos‐Daitsiotis, Eugenia Panou‐Pomonis
Journal of Peptide Science.2020;[Epub] CrossRef - Antimicrobial Peptides from Rat-Tailed Maggots of the Drone Fly Eristalis tenax Show Potent Activity against Multidrug-Resistant Gram-Negative Bacteria
Rolf Hirsch, Jochen Wiesner, Armin Bauer, Alexander Marker, Heiko Vogel, Peter Eugen Hammann, Andreas Vilcinskas
Microorganisms.2020; 8(5): 626. CrossRef - The protective and pathogenic roles of CXCL17 in human health and disease: Potential in respiratory medicine
José Alberto Choreño-Parra, Shyamala Thirunavukkarasu, Joaquín Zúñiga, Shabaana A. Khader
Cytokine & Growth Factor Reviews.2020; 53: 53. CrossRef - The global preclinical antibacterial pipeline
Ursula Theuretzbacher, Kevin Outterson, Aleks Engel, Anders Karlén
Nature Reviews Microbiology.2020; 18(5): 275. CrossRef - Combating Implant Infections: Shifting Focus from Bacteria to Host
Saber Amin Yavari, Suzanne M. Castenmiller, Jos A. G. van Strijp, Michiel Croes
Advanced Materials.2020;[Epub] CrossRef - Identification of two carcinin isoforms (MnCarc1 and MnCarc2) and their function in the antimicrobial immunity of Macrobrachium nipponense
Xiaoling Dai, Kaiqiang Wang, Ruidong Zhang, Chao Zhang, Xueying Cao, Xin Huang, Yufei Zhang, Qian Ren
Fish & Shellfish Immunology.2020; 106: 205. CrossRef - Antimicrobial Peptides: a New Frontier in Antifungal Therapy
Giuseppe Buda De Cesare, Shane A. Cristy, Danielle A. Garsin, Michael C. Lorenz, J. Andrew Alspaugh
mBio.2020;[Epub] CrossRef - Lactoferrin Functionalized Biomaterials: Tools for Prevention of Implant-Associated Infections
Emoke Pall, Alexandra Roman
Antibiotics.2020; 9(8): 522. CrossRef - Immunopathogenesis of COVID-19 and early immunomodulators
Kyung-Yil Lee, Jung-Woo Rhim, Jin-Han Kang
Clinical and Experimental Pediatrics.2020; 63(7): 239. CrossRef - Analysis of mutations of defensin protein using accelerated molecular dynamics simulations
Bharati Pandey, Chetna Tyagi, Gopal Kumar Prajapati, Awdhesh Kumar Mishra, Abeer Hashem, Abdulaziz A. Alqarawi, Elsayed Fathi Abd_Allah, Tapan Kumar Mohanta, Ayyalusamy Ramamoorthy
PLOS ONE.2020; 15(11): e0241679. CrossRef - Bronchial Epithelial Cells on the Front Line to Fight Lung Infection-Causing Aspergillus fumigatus
Jeanne Bigot, Loïc Guillot, Juliette Guitard, Manon Ruffin, Harriet Corvol, Viviane Balloy, Christophe Hennequin
Frontiers in Immunology.2020;[Epub] CrossRef - Neutrophil Extracellular Traps in Periodontitis
Antonio Magán-Fernández, Sarmad Muayad Rasheed Al-Bakri, Francisco O’Valle, Cristina Benavides-Reyes, Francisco Abadía-Molina, Francisco Mesa
Cells.2020; 9(6): 1494. CrossRef - Salmonid Antibacterial Immunity: An Aquaculture Perspective
Shawna L. Semple, Brian Dixon
Biology.2020; 9(10): 331. CrossRef - Polymeric and inorganic nanoscopical antimicrobial fillers in dentistry
Pooyan Makvandi, Jun Ting Gu, Ehsan Nazarzadeh Zare, Behnaz Ashtari, Arash Moeini, Franklin R. Tay, Li-na Niu
Acta Biomaterialia.2020; 101: 69. CrossRef - Multidrug Resistance (MDR) and Collateral Sensitivity in Bacteria, with Special Attention to Genetic and Evolutionary Aspects and to the Perspectives of Antimicrobial Peptides—A Review
András Fodor, Birhan Addisie Abate, Péter Deák, László Fodor, Ervin Gyenge, Michael G. Klein, Zsuzsanna Koncz, Josephat Muvevi, László Ötvös, Gyöngyi Székely, Dávid Vozik, László Makrai
Pathogens.2020; 9(7): 522. CrossRef - Assessing the effectiveness of AS-48 in experimental mice models of Chagas’ disease
Rubén Martín-Escolano, Rubén Cebrián, Mercedes Maqueda, Desirée Romero, Maria José Rosales, Manuel Sánchez-Moreno, Clotilde Marín
Journal of Antimicrobial Chemotherapy.2020; 75(6): 1537. CrossRef - Nanostructured antimicrobial peptides: The last push towards clinics
Jose Vicente Carratalá, Naroa Serna, Antonio Villaverde, Esther Vázquez, Neus Ferrer-Miralles
Biotechnology Advances.2020; 44: 107603. CrossRef - Functional peptide-based drug delivery systems
Zheng Lian, Tianjiao Ji
Journal of Materials Chemistry B.2020; 8(31): 6517. CrossRef - Gel Chromatographic Fractionation of Metabolic Complexes of L. rhamnosus GG and S. boulardii and their Antimicrobial Activity
O. Isaуenko, E. Babych , T. Gorbach, O. Semenchenko, O. Kotsar
Ukraïnsʹkij žurnal medicini, bìologìï ta sportu.2020; 5(4): 240. CrossRef - Antibacterial Activity of Non-Cytotoxic, Amino Acid-Modified Polycationic Dendrimers against Pseudomonas aeruginosa and Other Non-Fermenting Gram-Negative Bacteria
Anna Maria Schito, Silvana Alfei
Polymers.2020; 12(8): 1818. CrossRef - Antimicrobial activity of Ib-M peptides against Escherichia coli O157: H7
Sergio Prada-Prada, Johanna Flórez-Castillo, Ana Farfán-García, Fanny Guzmán, Indira Hernández-Peñaranda, Iddya Karunasagar
PLOS ONE.2020; 15(2): e0229019. CrossRef - Antimicrobial Peptides: An Approach to Combat Resilient Infections
Debaprasad Parai, Pia Dey, Samir K. Mukherjee
Current Drug Discovery Technologies.2020; 17(4): 542. CrossRef - Proof of concept: could snake venoms be a potential source of bioactive compounds for control of mould growth and mycotoxin production
C. Verheecke‐Vaessen, J. Monte, E. Garcia‐Cela, N. Magan, A. Medina
Letters in Applied Microbiology.2020; 71(5): 459. CrossRef - Application of Biophysical Techniques to Investigate the Interaction of Antimicrobial Peptides With Bacterial Cells
Maria Luisa Gelmi, Luca Domenico D'Andrea, Alessandra Romanelli
Frontiers in Medical Technology.2020;[Epub] CrossRef - Crotamine and crotalicidin, membrane active peptides from Crotalus durissus terrificus rattlesnake venom, and their structurally-minimized fragments for applications in medicine and biotechnology
Claudio Borges Falcao, Gandhi Radis-Baptista
Peptides.2020; 126: 170234. CrossRef - Protecting the outside: biological tools to manipulate the skin microbiota
Julie N O'Sullivan, Mary C Rea, Colin Hill, R Paul Ross
FEMS Microbiology Ecology.2020;[Epub] CrossRef - Therapeutic potential of a designed CSαβ peptide ID13 in Staphylococcus aureus-induced endometritis of mice
Bing Li, Na Yang, Yuxue Shan, Xiumin Wang, Ya Hao, Ruoyu Mao, Da Teng, Huan Fan, Jianhua Wang
Applied Microbiology and Biotechnology.2020; 104(15): 6693. CrossRef - Ark shell protein‐derived bioactive peptides promote osteoblastic differentiation through upregulation of the canonical Wnt/β‐catenin signaling in human bone marrow‐derived mesenchymal stem cells
Yunok Oh, Chang‐Bum Ahn, Jae‐Young Je
Journal of Food Biochemistry.2020;[Epub] CrossRef - Influence of Different Aromatic Hydrophobic Residues on the Antimicrobial Activity and Membrane Selectivity of BRBR-NH2 Tetrapeptide
Lei Liu, Liling Zhao, Lixia Liu, Shizhong Yue, Jihua Wang, Zanxia Cao
Langmuir.2020; 36(50): 15331. CrossRef - Direct antimicrobial activity of cationic amphipathic peptide WLBU2 against Staphylococcus aureus biofilms is enhanced in physiologic buffered saline
Jonathan B. Mandell, John A. Koch, Berthony Deslouches, Kenneth L. Urish
Journal of Orthopaedic Research.2020; 38(12): 2657. CrossRef - Clinical Applications of Antimicrobial Peptides (AMPs): Where do we Stand Now?
Mithoor Divyashree, Madhu K. Mani, Dhanasekhar Reddy, Ranjith Kumavath, Preetam Ghosh, Vasco Azevedo, Debmalya Barh
Protein & Peptide Letters.2020; 27(2): 120. CrossRef - Microwave‐assisted extraction (MAE) combined with gas chromatography–mass spectrometry (GC–MS) for determination of volatile small molecules to evaluate compatibility of antimicrobial peptide PL‐5 spray with packaging materials
Chu Liu, Xiangyong Yu, Zhaorui Meng, Ning Zhao, Fujuan Bai, Longshan Zhao
Biomedical Chromatography.2020;[Epub] CrossRef - Temporin L-derived peptide as a regulator of the acute inflammatory response in zymosan-induced peritonitis
Rosa Bellavita, Federica Raucci, Francesco Merlino, Marialuisa Piccolo, Maria Grazia Ferraro, Carlo Irace, Rita Santamaria, Asif J. Iqbal, Ettore Novellino, Paolo Grieco, Nicola Mascolo, Francesco Maione
Biomedicine & Pharmacotherapy.2020; 123: 109788. CrossRef - An automatic representation of peptides for effective antimicrobial activity classification
Jesus A. Beltran, Gabriel Del Rio, Carlos A. Brizuela
Computational and Structural Biotechnology Journal.2020; 18: 455. CrossRef - Double-Headed Cationic Lipopeptides: An Emerging Class of Antimicrobials
Izabela Małuch, Oktawian Stachurski, Paulina Kosikowska-Adamus, Marta Makowska, Marta Bauer, Dariusz Wyrzykowski, Aleksandra Hać, Wojciech Kamysz, Milena Deptuła, Michał Pikuła, Emilia Sikorska
International Journal of Molecular Sciences.2020; 21(23): 8944. CrossRef - Antimicrobial Susceptibility Testing of Antimicrobial Peptides to Better Predict Efficacy
Derry K. Mercer, Marcelo D. T. Torres, Searle S. Duay, Emma Lovie, Laura Simpson, Maren von Köckritz-Blickwede, Cesar de la Fuente-Nunez, Deborah A. O'Neil, Alfredo M. Angeles-Boza
Frontiers in Cellular and Infection Microbiology.2020;[Epub] CrossRef - Physicochemical-guided design of cathelicidin-derived peptides generates membrane active variants with therapeutic potential
Nelson G. J. Oliveira, Marlon H. Cardoso, Nadya Velikova, Marcel Giesbers, Jerry M. Wells, Taia M. B. Rezende, Renko de Vries, Octávio L. Franco
Scientific Reports.2020;[Epub] CrossRef - Pseudonajide peptide derived from snake venom alters cell envelope integrity interfering on biofilm formation in Staphylococcus epidermidis
Rafael Schneider, Muriel Primon-Barros, Rafael Gomes Von Borowski, Sophie Chat, Sylvie Nonin-Lecomte, Reynald Gillet, Alexandre José Macedo
BMC Microbiology.2020;[Epub] CrossRef - An Enhanced Variant Designed From DLP4 Cationic Peptide Against Staphylococcus aureus CVCC 546
Bing Li, Na Yang, Xiumin Wang, Ya Hao, Ruoyu Mao, Zhanzhan Li, Zhenlong Wang, Da Teng, Jianhua Wang
Frontiers in Microbiology.2020;[Epub] CrossRef - Strategies for recombinant production of antimicrobial peptides with pharmacological potential
Kamila Botelho Sampaio de Oliveira, Michel Lopes Leite, Gisele Regina Rodrigues, Harry Morales Duque, Rosiane Andrade da Costa, Victor Albuquerque Cunha, Lorena Sousa de Loiola Costa, Nicolau Brito da Cunha, Octavio Luiz Franco, Simoni Campos Dias
Expert Review of Clinical Pharmacology.2020; 13(4): 367. CrossRef - Kinetoplastid Membrane Protein-11 Induces Pores in Anionic Phospholipid Membranes: Effect of Cholesterol
Animesh Halder, Achinta Sannigrahi, Nayan De, Krishnananda Chattopadhyay, Sanat Karmakar
Langmuir.2020; 36(13): 3522. CrossRef - Interactions of “de novo” designed peptides with bacterial membranes: Implications in the antimicrobial activity
Patricia Maturana, Sónia Gonçalves, Melina Martinez, Juan C. Espeche, Nuno C. Santos, Liliana Semorile, Paulo C. Maffia, Axel Hollmann
Biochimica et Biophysica Acta (BBA) - Biomembranes.2020; 1862(11): 183443. CrossRef - Tailoring the Physicochemical Properties of Antimicrobial Peptides onto a Thiazole-Based γ-Peptide Foldamer
Clément Bonnel, Baptiste Legrand, Matthieu Simon, Margaux Clavié, Agnès Masnou, Estelle Jumas-Bilak, Young Kee Kang, Patricia Licznar-Fajardo, Ludovic T. Maillard, Nicolas Masurier
Journal of Medicinal Chemistry.2020; 63(17): 9168. CrossRef - Expression and Roles of Antimicrobial Peptides in Innate Defense of Airway Mucosa: Potential Implication in Cystic Fibrosis
Regina Geitani, Carole Ayoub Moubareck, Zhengzhong Xu, Dolla Karam Sarkis, Lhousseine Touqui
Frontiers in Immunology.2020;[Epub] CrossRef - PACAP Is Lethal to Flavobacterium psychrophilum Through Either Direct Membrane Permeabilization or Indirectly, by Priming the Immune Response in Rainbow Trout Macrophages
Shawna L. Semple, Tania Rodríguez-Ramos, Yamila Carpio, John S. Lumsden, Mario P. Estrada, Brian Dixon
Frontiers in Immunology.2019;[Epub] CrossRef - Self-Association of Antimicrobial Peptides: A Molecular Dynamics Simulation Study on Bombinin
Peicho Petkov, Elena Lilkova, Nevena Ilieva, Leandar Litov
International Journal of Molecular Sciences.2019; 20(21): 5450. CrossRef - A Comparative Study of the Antimicrobial and Structural Properties of Short Peptides and Lipopeptides Containing a Repetitive Motif KLFK
María Verónica Húmpola, María Carolina Rey, Pablo Gabriel Spontón, Arturo Carlos Simonetta, Georgina Guadalupe Tonarelli
Protein & Peptide Letters.2019; 26(3): 192. CrossRef - Perspectives on synthetic pharmacotherapy for the treatment of nosocomial pneumonia
Ana Motos, Hua Yang, Minlan Yang, Antoni Torres
Expert Opinion on Pharmacotherapy.2019; 20(12): 1439. CrossRef - Disulfide engineering on temporin‐SHf: Stabilizing the bioactive conformation of an ultra‐short antimicrobial peptide
Ashwini Dolle, Veera Babu Nagati, Yamanappa Hunashal, Kiran Krishnamurthy, Anil Kumar Pasupulati, Srinivasarao Raghothama, Konkallu Hanumae Gowd
Chemical Biology & Drug Design.2019; 94(3): 1634. CrossRef - Antimicrobial peptides activity in the skin
Anna Herman, Andrzej P. Herman
Skin Research and Technology.2019; 25(2): 111. CrossRef - Structural determinants conferring unusual long life in human serum to rattlesnake‐derived antimicrobial peptide Ctn[15‐34]
Clara Pérez‐Peinado, Susana A. Dias, Diogo A. Mendonça, Miguel A.R.B. Castanho, Ana S. Veiga, David Andreu
Journal of Peptide Science.2019;[Epub] CrossRef - A putative antimicrobial peptide from Hymenoptera in the megaplasmid pSCL4 of Streptomyces clavuligerus ATCC 27064 reveals a singular case of horizontal gene transfer with potential applications
Sebastián Ayala‐Ruano, Daniela Santander‐Gordón, Eduardo Tejera, Yunierkis Perez‐Castillo, Vinicio Armijos-Jaramillo
Ecology and Evolution.2019; 9(5): 2602. CrossRef - A Novel Dermaseptin Isolated from the Skin Secretion of Phyllomedusa tarsius and Its Cationicity-Enhanced Analogue Exhibiting Effective Antimicrobial and Anti-Proliferative Activities
Miaoran Li, Xinping Xi, Chengbang Ma, Xiaoling Chen, Mei Zhou, James F. Burrows, Tianbao Chen, Lei Wang
Biomolecules.2019; 9(10): 628. CrossRef - Antimicrobial Peptides: Recent Insights on Biotechnological Interventions and Future Perspectives
Rajeshwari Sinha, Pratyoosh Shukla
Protein & Peptide Letters.2019; 26(2): 79. CrossRef - Cationic antimicrobial peptides: alternatives and/or adjuvants to antibiotics active against methicillin-resistant Staphylococcus aureus and multidrug-resistant Pseudomonas aeruginosa
Regina Geitani, Carole Ayoub Moubareck, Lhousseine Touqui, Dolla Karam Sarkis
BMC Microbiology.2019;[Epub] CrossRef - Supramolecular Antibacterial Materials for Combatting Antibiotic Resistance
Xingshu Li, Haotian Bai, Yuchong Yang, Juyoung Yoon, Shu Wang, Xi Zhang
Advanced Materials.2019;[Epub] CrossRef - Salt-Tolerant Antifungal and Antibacterial Activities of the Corn Defensin ZmD32
Bomai K. Kerenga, James A. McKenna, Peta J. Harvey, Pedro Quimbar, Donovan Garcia-Ceron, Fung T. Lay, Thanh Kha Phan, Prem K. Veneer, Shaily Vasa, Kathy Parisi, Thomas M. A. Shafee, Nicole L. van der Weerden, Mark D. Hulett, David J. Craik, Marilyn A. And
Frontiers in Microbiology.2019;[Epub] CrossRef - Péptidos antimicrobianos, una alternativa prometedora para el tratamiento de enfermedades infecciosas
Kevin Samael Olascoaga-Del Angel, Grecia Sánchez-Evangelista, Israel Carmona-Navarrete, María del Carmen Galicia-Sanchez, Angélica Gómez-Luna, Susan Janneth Islas-Arollo, Jorge Ismael Castañeda-Sánchez
Kompass Neumología.2019; 1(1): 15. CrossRef - Susceptibility of microbial cells to the modified PIP2-binding sequence of gelsolin anchored on the surface of magnetic nanoparticles
Robert Bucki, Katarzyna Niemirowicz-Laskowska, Piotr Deptuła, Agnieszka Z. Wilczewska, Paweł Misiak, Bonita Durnaś, Krzysztof Fiedoruk, Ewelina Piktel, Joanna Mystkowska, Paul A. Janmey
Journal of Nanobiotechnology.2019;[Epub] CrossRef - Positive Charge Patterning and Hydrophobicity of Membrane-Active Antimicrobial Peptides as Determinants of Activity, Toxicity, and Pharmacokinetic Stability
Tracy A. Stone, Gregory B. Cole, Dorna Ravamehr-Lake, Huong Q. Nguyen, Farheen Khan, Simon Sharpe, Charles M. Deber
Journal of Medicinal Chemistry.2019; 62(13): 6276. CrossRef - Designer Peptide and Protein Dendrimers: A Cross-Sectional Analysis
Rachit Sapra, Ram P. Verma, Govind P. Maurya, Sameer Dhawan, Jisha Babu, V. Haridas
Chemical Reviews.2019; 119(21): 11391. CrossRef - A Synthetic Derivative of Antimicrobial Peptide Holothuroidin 2 from Mediterranean Sea Cucumber (Holothuria tubulosa) in the Control of Listeria monocytogenes
Maria Grazia Cusimano, Angelo Spinello, Giampaolo Barone, Domenico Schillaci, Stella Cascioferro, Alessandra Magistrato, Barbara Parrino, Vincenzo Arizza, Maria Vitale
Marine Drugs.2019; 17(3): 159. CrossRef - Systematical Analysis of the Protein Targets of Lactoferricin B and Histatin-5 Using Yeast Proteome Microarrays
Pramod Shah, Wei-Sheng Wu, Chien-Sheng Chen
International Journal of Molecular Sciences.2019; 20(17): 4218. CrossRef - Antiseptic Effect of Ps-K18: Mechanism of Its Antibacterial and Anti-Inflammatory Activities
Mihee Jang, Jieun Kim, Yujin Choi, JeongKyu Bang, Yangmee Kim
International Journal of Molecular Sciences.2019; 20(19): 4895. CrossRef - Pullulan nanofibers containing the antimicrobial palindromic peptide LfcinB (21–25)Palobtainedviaelectrospinning
Julieth Tatiana Román, Carlos Alberto Fuenmayor, Carlos Mario Zuluaga Dominguez, Dianney Clavijo-Grimaldo, Martha Acosta, Javier Eduardo García-Castañeda, Ricardo Fierro-Medina, Zuly Jenny Rivera-Monroy
RSC Advances.2019; 9(35): 20432. CrossRef - Replacement of l-Amino Acids by d-Amino Acids in the Antimicrobial Peptide Ranalexin and Its Consequences for Antimicrobial Activity and Biodistribution
Cornelius Domhan, Philipp Uhl, Christian Kleist, Stefan Zimmermann, Florian Umstätter, Karin Leotta, Walter Mier, Michael Wink
Molecules.2019; 24(16): 2987. CrossRef - A New Hope: Self-Assembling Peptides with Antimicrobial Activity
Lucia Lombardi, Annarita Falanga, Valentina Del Genio, Stefania Galdiero
Pharmaceutics.2019; 11(4): 166. CrossRef - Effects of the antimicrobial peptide L12 against multidrug‑resistant Staphylococcus aureus
Fu Xiong, Xiaotian Dai, Yu‑Xue Li, Rui Wei, Li An, Yajuan Wang, Zhenhong Chen
Molecular Medicine Reports.2019;[Epub] CrossRef - Utilization of antimicrobial peptides, analogues and mimics in creating antimicrobial surfaces and bio-materials
Ingrid Batista Pinto, Leandro dos Santos Machado, Beatriz Torres Meneguetti, Micaella Lima Nogueira, Cristiano Marcelo Espínola Carvalho, Antonia Railda Roel, Octávio Luiz Franco
Biochemical Engineering Journal.2019; 150: 107237. CrossRef - Drug delivery systems designed to overcome antimicrobial resistance
Thanh‐Nhat Pham, Pauline Loupias, Alexandra Dassonville‐Klimpt, Pascal Sonnet
Medicinal Research Reviews.2019; 39(6): 2343. CrossRef - Discovery of a Novel Antimicrobial Lipopeptide, Brevibacillin V, from Brevibacillus laterosporus fmb70 and Its Application on the Preservation of Skim Milk
Yubo Wu, Libang Zhou, Fengxia Lu, Xiaomei Bie, Haizhen Zhao, Chong Zhang, Zhaoxin Lu, Yingjian Lu
Journal of Agricultural and Food Chemistry.2019; 67(45): 12452. CrossRef - Biotechnological Production of the Cell Penetrating Antifungal PAF102 Peptide in Pichia pastoris
Crina Popa, Xiaoqing Shi, Tarik Ruiz, Pau Ferrer, María Coca
Frontiers in Microbiology.2019;[Epub] CrossRef - Hepcidin gene of Indian major carp, Labeo rohita: Molecular, structural and functional characterization, and antibacterial activity of recombinant hepcidin
Amruta Mohapatra, A. Dixit, L.C. Garg, P.K. Sahoo
Aquaculture.2019; 511: 734218. CrossRef - Profiling antimicrobial peptides from the medical maggotLucilia sericataas potential antibiotics for MDR Gram-negative bacteria
Rolf Hirsch, Jochen Wiesner, Alexander Marker, Yvonne Pfeifer, Armin Bauer, Peter E Hammann, Andreas Vilcinskas
Journal of Antimicrobial Chemotherapy.2019; 74(1): 96. CrossRef - Profiling of Polar Metabolites in Mouse Feces Using Four Analytical Platforms to Study the Effects Of Cathelicidin-Related Antimicrobial Peptide in Alcoholic Liver Disease
Liqing He, Fengyuan Li, Xinmin Yin, Patrick Bohman, Seongho Kim, Craig J. McClain, Wenke Feng, Xiang Zhang
Journal of Proteome Research.2019; 18(7): 2875. CrossRef - Antifungal Activity, Toxicity, and Membranolytic Action of a Mastoparan Analog Peptide
Junya de Lacorte Singulani, Mariana Cristina Galeane, Marina Dorisse Ramos, Paulo César Gomes, Claudia Tavares dos Santos, Bibiana Monson de Souza, Mario Sergio Palma, Ana Marisa Fusco Almeida, Maria José Soares Mendes Giannini
Frontiers in Cellular and Infection Microbiology.2019;[Epub] CrossRef - Tryptophan-Rich and Proline-Rich Antimicrobial Peptides
Awdhesh Mishra, Jaehyuk Choi, Eunpyo Moon, Kwang-Hyun Baek
Molecules.2018; 23(4): 815. CrossRef - The Effect of Polymer Microstructure on Encapsulation Efficiency and Release Kinetics of Citropin 1.1 from the Poly(ε-caprolactone) Microparticles
Urszula Piotrowska, Ewa Oledzka, Wojciech Kamysz, Sławomir Białek, Marcin Sobczak
Nanomaterials.2018; 8(7): 482. CrossRef - Über bisherige Denkweisen hinaus – neue Wirkstoffe zur Überwindung der Antibiotika‐Krise
Markus Lakemeyer, Weining Zhao, Franziska A. Mandl, Peter Hammann, Stephan A. Sieber
Angewandte Chemie.2018; 130(44): 14642. CrossRef - Antitumor activity of RT2 peptide derived from crocodile leukocyte peptide on human colon cancer xenografts in nude mice
Pornsuda Maraming, Sompong Klaynongsruang, Patcharee Boonsiri, Surachai Maijaroen, Sakda Daduang, Jing‐Gung Chung, Jureerut Daduang
Environmental Toxicology.2018; 33(9): 972. CrossRef - Immunological Tolerance, Pregnancy, and Preeclampsia: The Roles of Semen Microbes and the Father†
Louise C. Kenny, Douglas B. Kell
Frontiers in Medicine.2018;[Epub] CrossRef - A Recombinant Snake Cathelicidin Derivative Peptide: Antibiofilm Properties and Expression in Escherichia coli
Mercedeh Tajbakhsh, Maziar Mohammad Akhavan, Fatemeh Fallah, Abdollah Karimi
Biomolecules.2018; 8(4): 118. CrossRef - Regulated Cell Death as a Therapeutic Target for Novel Antifungal Peptides and Biologics
Michael R. Yeaman, Sabrina Büttner, Karin Thevissen, Alessandra Ricelli
Oxidative Medicine and Cellular Longevity.2018;[Epub] CrossRef - Antimicrobial peptides of buffalo and their role in host defenses
Khangembam Victoria Chanu, Dimpal Thakuria, Satish Kumar
Veterinary World.2018; 11(2): 192. CrossRef - The Evolutionary Conserved γ-Core Motif Influences the Anti-Candida Activity of the Penicillium chrysogenum Antifungal Protein PAF
Christoph Sonderegger, Györgyi Váradi, László Galgóczy, Sándor Kocsubé, Wilfried Posch, Attila Borics, Sandrine Dubrac, Gábor K. Tóth, Doris Wilflingseder, Florentine Marx
Frontiers in Microbiology.2018;[Epub] CrossRef - Antimicrobial activities of a proline-rich proprotein from Spodoptera litura
Li-Ling Yang, Ming-Yue Zhan, Yu-Li Zhuo, Yue-Min Pan, Yang Xu, Xiu-Hong Zhou, Pei-Jin Yang, Hong-Li Liu, Zi-Hao Liang, Xiao-Dan Huang, Xiao-Qiang Yu, Xiang-Jun Rao
Developmental & Comparative Immunology.2018; 87: 137. CrossRef - Cell-Selective Pore Forming Antimicrobial Peptides of the Prodomain of Human Furin: A Conserved Aromatic/Cationic Sequence Mapping, Membrane Disruption, and Atomic-Resolution Structure and Dynamics
Sheetal Sinha, Munesh Kumar Harioudh, Rikeshwer P. Dewangan, Wun Jern Ng, Jimut Kanti Ghosh, Surajit Bhattacharjya
ACS Omega.2018; 3(11): 14650. CrossRef - Thinking Outside the Box—Novel Antibacterials To Tackle the Resistance Crisis
Markus Lakemeyer, Weining Zhao, Franziska A. Mandl, Peter Hammann, Stephan A. Sieber
Angewandte Chemie International Edition.2018; 57(44): 14440. CrossRef - Breaking the frontiers of cosmetology with antimicrobial peptides
Thuany Alencar-Silva, Mariana Carolina Braga, Gustavo Oliveira Silva Santana, Felipe Saldanha-Araujo, Robert Pogue, Simoni Campos Dias, Octavio Luiz Franco, Juliana Lott Carvalho
Biotechnology Advances.2018; 36(8): 2019. CrossRef - From Antimicrobial Peptides to Antimicrobial Poly(α‐amino acid)s
Wei Shen, Pan He, Chunsheng Xiao, Xuesi Chen
Advanced Healthcare Materials.2018;[Epub] CrossRef - Designing improved active peptides for therapeutic approaches against infectious diseases
Bárbara Gomes, Marcelo T. Augusto, Mário R. Felício, Axel Hollmann, Octávio L. Franco, Sónia Gonçalves, Nuno C. Santos
Biotechnology Advances.2018; 36(2): 415. CrossRef - Antimicrobial Peptides and Their Therapeutic Potential for Bacterial Skin Infections and Wounds
Anja Pfalzgraff, Klaus Brandenburg, Günther Weindl
Frontiers in Pharmacology.2018;[Epub] CrossRef - Antimicrobial Peptides and Nanotechnology, Recent Advances and Challenges
Lubhandwa S. Biswaro, Mauricio G. da Costa Sousa, Taia M. B. Rezende, Simoni C. Dias, Octavio L. Franco
Frontiers in Microbiology.2018;[Epub] CrossRef - Bioinspired Designs, Molecular Premise and Tools for Evaluating the Ecological Importance of Antimicrobial Peptides
Elvis Legala Ongey, Stephan Pflugmacher, Peter Neubauer
Pharmaceuticals.2018; 11(3): 68. CrossRef - Wound-Healing Peptides for Treatment of Chronic Diabetic Foot Ulcers and Other Infected Skin Injuries
Ana Gomes, Cátia Teixeira, Ricardo Ferraz, Cristina Prudêncio, Paula Gomes
Molecules.2017; 22(10): 1743. CrossRef - Potential role of an antimicrobial peptide, KLK in inhibiting lipopolysaccharide-induced macrophage inflammation
Pornpimon Jantaruk, Sittiruk Roytrakul, Sutthirat Sitthisak, Duangkamol Kunthalert, Anirban Bhunia
PLOS ONE.2017; 12(8): e0183852. CrossRef - Design, Recombinant Fusion Expression and Biological Evaluation of Vasoactive Intestinal Peptide Analogue as Novel Antimicrobial Agent
Chunlan Xu, Yu Guo, Xiangjin Qiao, Xiaoya Shang, Weining Niu, Mingliang Jin
Molecules.2017; 22(11): 1963. CrossRef - Redesigned Spider Peptide with Improved Antimicrobial and Anticancer Properties
Sónia Troeira Henriques, Nicole Lawrence, Stephanie Chaousis, Anjaneya S. Ravipati, Olivier Cheneval, Aurélie H. Benfield, Alysha G. Elliott, Angela Maria Kavanagh, Matthew A. Cooper, Lai Yue Chan, Yen-Hua Huang, David J. Craik
ACS Chemical Biology.2017; 12(9): 2324. CrossRef - Peptides with Dual Antimicrobial and Anticancer Activities
Mário R. Felício, Osmar N. Silva, Sônia Gonçalves, Nuno C. Santos, Octávio L. Franco
Frontiers in Chemistry.2017;[Epub] CrossRef - Novel antimicrobial peptide CPF‐C1 analogs with superior stabilities and activities against multidrug‐resistant bacteria
Junqiu Xie, Qian Zhao, Sisi Li, Zhibin Yan, Jing Li, Yao Li, Lingyun Mou, Bangzhi Zhang, Wenle Yang, Xiaokang Miao, Xianxing Jiang, Rui Wang
Chemical Biology & Drug Design.2017; 90(5): 690. CrossRef - Antimicrobial peptide repertoire of Thitarodes armoricanus, a host species of Ophiocordyceps sinensis, predicted based on de novo transcriptome sequencing and analysis
Min Wang, Xianda Hu
Infection, Genetics and Evolution.2017; 54: 238. CrossRef - Testing cathelicidin susceptibility of bacterial mastitis isolates: Technical challenges and data output for clinical isolates
Melissa N. Langer, Stefanie Blodkamp, Martin Bayerbach, Andrea T. Feßler, Nicole de Buhr, Thomas Gutsmann, Lothar Kreienbrock, Stefan Schwarz, Maren von Köckritz-Blickwede
Veterinary Microbiology.2017; 210: 107. CrossRef - Protein-only, antimicrobial peptide-containing recombinant nanoparticles with inherent built-in antibacterial activity
Naroa Serna, Laura Sánchez-García, Alejandro Sánchez-Chardi, Ugutz Unzueta, Mónica Roldán, Ramón Mangues, Esther Vázquez, Antonio Villaverde
Acta Biomaterialia.2017; 60: 256. CrossRef
- REVIEW] The Ruminococci: key symbionts of the gut ecosystem
-
Alex J. La Reau , Garret Suen
-
J. Microbiol. 2018;56(3):199-208. Published online February 28, 2018
-
DOI: https://doi.org/10.1007/s12275-018-8024-4
-
-
47
View
-
0
Download
-
213
Crossref
-
Abstract
-
Mammalian gut microbial communities form intricate mutualisms
with their hosts, which have profound implications
on overall health. One group of important gut microbial mutualists
are bacteria in the genus Ruminococcus, which serve
to degrade and convert complex polysaccharides into a variety
of nutrients for their hosts. Isolated decades ago from the bovine
rumen, ruminococci have since been cultured from other
ruminant and non-ruminant sources, and next-generation
sequencing has further shown their distribution to be widespread
in a diversity of animal hosts. While most ruminococci
that have been studied are those capable of degrading
cellulose, much less is known about non-cellulolytic, nonruminant-
associated species, such as those found in humans.
Furthermore, a mechanistic understanding of the role of
Ruminococcus spp. in their respective hosts is still a work in
progress. This review highlights the broad work done on
species within the genus Ruminococcus with respect to their
physiology, phylogenetic relatedness, and their potential impact
on host health.
-
Citations
Citations to this article as recorded by

- Roles of engineered lignocellulolytic microbiota in bioaugmenting lignocellulose biomethanation
Bikram Basak, Ramesh Kumar, Rahul S. Tanpure, Amrita Mishra, Suraj K. Tripathy, Sankha Chakrabortty, Hyun-Seog Roh, Krishna Kumar Yadav, Woojin Chung, Byong-Hun Jeon
Renewable and Sustainable Energy Reviews.2025; 207: 114913. CrossRef - Cordycepin improves liver fibrosis and the intestinal flora disturbance induced by 3,5-diethoxycarbonyl-1,4-dihydroxylidine in mice
Ruiqi Xia, Bing Wu, Yourong Jian, Xiangting Li, Wen Zhang, Xiaoqing Zeng, Shiyao Chen
European Journal of Pharmacology.2025; 987: 177172. CrossRef - Human microbiota peptides: important roles in human health
Abdul Bari Shah, Sang Hee Shim
Natural Product Reports.2025;[Epub] CrossRef - Astragalus polysaccharide alleviates mastitis disrupted by Staphylococcus aureus infection by regulating gut microbiota and SCFAs metabolism
Kefei Li, Xin Ran, Jiaxi Han, Huiping Ding, Xiaoxuan Wang, Yutao Li, Weiwei Guo, Xinyi Li, Wenjin Guo, Shoupeng Fu, Junlong Bi
International Journal of Biological Macromolecules.2025; 286: 138422. CrossRef - Genetic insights into the gut microbiota, herpes zoster, and postherpetic neuralgia: a bidirectional two-sample Mendelian randomization study
Zhimin Deng, Yali Liu, Haiying Wang, Tianyuan Luo
Frontiers in Genetics.2024;[Epub] CrossRef - Effects of dietary addition of ellagic acid on rumen metabolism, nutrient apparent digestibility, and growth performance in Kazakh sheep
Wenjie Zhang, Feier Ren, Changjiang Zang, Fan Yang, Xuanyue Li, Xinxin Huang, Kaixu Chen, Xiaobin Li
Frontiers in Veterinary Science.2024;[Epub] CrossRef - WITHDRAWN: Isolation and Functional Study of Efficient Cellulose Degrading Bacteria from Horse Cecum Contents
Xiaoyue Li, Hui Li, Xiaoli Fang, Cunyuan Li, Jinming Yu, Jihong Dai, Xia Liu, Kaiping Liu, Ruyue He, Zhuang Liu, Wei Ni, Shengwei Hu
Heliyon.2024; : e28437. CrossRef - Crosstalk between innate immunity and rumen-fecal microbiota under the cold stress in goats
Tao Luo, Jiangjiang Zhu, Kerui Li, Yongtao Li, Jun Li, Yu Chen, Hengbo Shi
Frontiers in Immunology.2024;[Epub] CrossRef - Development and evaluation of an ensemble model to identify host-related metadata from fecal microbiota of zoo-housed mammals
Franziska Zoelzer, Daniel dos Santos Monteiro, Paul Wilhelm Dierkes
Frontiers in Mammal Science.2024;[Epub] CrossRef - Evaluating the potential prebiotic effects of umbu-cajá (Spondias spp.) fruit processing by-product flour on the human intestinal microbiota
Jordana Nunes de Oliveira, Thatyane Mariano Rodrigues de Albuquerque, Marcos dos Santos Lima, Elma Regina Silva de Andrade Wartha, Mariana Monteiro, Yuri Mangueira do Nascimento, Josean Fechine Tavares, Marcelo Sobral da Silva, Evandro Leite de Souza, Jan
LWT.2024; 210: 116764. CrossRef - Traditional Chinese medicine improved diabetic kidney disease through targeting gut microbiota
Xia-Qing Wu, Lei Zhao, Yan-Long Zhao, Xin-Yao He, Liang Zou, Ying-Yong Zhao, Xia Li
Pharmaceutical Biology.2024; 62(1): 423. CrossRef - Natural Foraging Selection and Gut Microecology of Two Subterranean Rodents from the Eurasian Steppe in China
Zhenghaoni Shang, Kai Chen, Tingting Han, Fan Bu, Shanshan Sun, Na Zhu, Duhu Man, Ke Yang, Shuai Yuan, Heping Fu
Animals.2024; 14(16): 2334. CrossRef - Differential immunological responses in lamb rumen and colon to alfalfa hay and wheat straw in a concentrate-rich diet: insights into microbe-host interactions
Kefyalew Gebeyew, Hui Mi, Yong Liu, Yongbin Liu, Biao Wang, Teka Feyera, Tan Zhiliang, Zhixiong He, Tricia A. Van Laar
mSystems.2024;[Epub] CrossRef - Deciphering the influence of gut and oral microbiomes on menopause for healthy aging
Shuting Yu, Feiling Huang, Yixuan Huang, Fangxu Yan, Yi Li, Shenglong Xu, Yao Zhao, Xinlei Zhang, Rong Chen, Xingming Chen, Peng Zhang
Journal of Genetics and Genomics.2024;[Epub] CrossRef - Multi-omics analyses reveal rumen microbes and secondary metabolites that are unique to livestock species
Victor O. Omondi, Geoffrey O. Bosire, John M. Onyari, Caleb Kibet, Samuel Mwasya, Vanessa N. Onyonyi, Merid N. Getahun, James R. Brown
mSystems.2024;[Epub] CrossRef - Liberated bioactive bound phenolics during in vitro gastrointestinal digestion and colonic fermentation boost the prebiotic effects of triticale insoluble dietary fiber
Chunyan Hou, Lianjia Zhao, Muhua Ji, Jingjing Yu, Yan Di, Qian Liu, Zhengmao Zhang, Lijun Sun, Xuebo Liu, Yutang Wang
Food Chemistry.2024; 457: 140124. CrossRef - Mechanistic insights into inositol-mediated rumen function promotion and metabolic alteration using in vitro and in vivo models
Guopei Yin, Zhe Sun, Zhanqing Wang, Yuanhong Xia, Long Cheng, Guixin Qin, Natnael D. Aschalew, Hongyun Liu, Xuefeng Zhang, Qilu Wu, Weigang Zhang, Wei Zhao, Tao Wang, Yuguo Zhen
Frontiers in Veterinary Science.2024;[Epub] CrossRef - Gut Microbial Dysbiosis Differs in Two Distinct Cachectic Tumor-Bearing Models Consuming the Same Diet
Lauri O. Byerley, Brittany Lorenzen, Hsiao-Man Chang, William G. Hartman, Michael J. Keenan, Ryan Page, Meng Luo, Scot E. Dowd, Christopher M. Taylor
Nutrients.2024; 16(7): 1076. CrossRef - In Silico Analysis of Probiotic Bacteria Changes Across COVID-19 Severity Stages
Clarissa Reginato Taufer, Juliana da Silva, Pabulo Henrique Rampelotto
Microorganisms.2024; 12(11): 2353. CrossRef - Assessing the impact of hatching system and body weight on the growth performance, caecal short-chain fatty acids, and microbiota composition and functionality in broilers
Muhammad Zeeshan Akram, Ester Arévalo Sureda, Luke Comer, Matthias Corion, Nadia Everaert
Animal Microbiome.2024;[Epub] CrossRef - Effect of Raw and Cooked Green Bananas on Cecal Fermentation Characteristics in Rats
Ryuji Nagata, Naoki Fukuma, Naoto Hashimoto, Kenichiro Shimada, Yasunori Nakayama, Kyu‐Ho Han, Michihiro Fukushima
Starch - Stärke.2024;[Epub] CrossRef - Gut microbiota, allergic rhinitis, vasomotor rhinitis, Mendelian randomization, causal association
Xitan Lin, Xiaoyan Hu, Jing Zhang, Jing Luo, Gang Qin, Liang Jiang
Brazilian Journal of Otorhinolaryngology.2024; 90(6): 101491. CrossRef -
Pharmacological benefits of
Acacia
against metabolic diseases: intestinal-level bioactivities and favorable modulation of gut microbiota
Manas Ranjan Saha, Priyankar Dey
Archives of Physiology and Biochemistry.2024; 130(1): 70. CrossRef - Alteration of the gut microbial composition of critically endangered Malayan tigers (Panthera tigris jacksoni) in captivity during enrichment phase
Mohamad Khairulmunir, Millawati Gani, Abd Rahman Mohd-Ridwan, Kayal Vizi Karuppannan, Muhammad Abu Bakar Abdul-Latiff, Badrul Munir Md-Zain
Molecular Biology Reports.2024;[Epub] CrossRef - Influence of Cuticular Waxes from Triticale on Rumen Fermentation: A Metabolomic and Microbiome Profiling Study
Jiahao Huang, Jiawei Xu, Ruixin Wu, Jinjing Wang, Jianfeng Yang, Yuan Li, Bo Wang, Wangdan Xiong, Yanjun Guo
Journal of Agricultural and Food Chemistry.2024; 72(3): 1592. CrossRef - Metabolic and inflammatory perturbation of diabetes associated gut dysbiosis in people living with and without HIV infection
Kai Luo, Brandilyn A. Peters, Jee-Young Moon, Xiaonan Xue, Zheng Wang, Mykhaylo Usyk, David B. Hanna, Alan L. Landay, Michael F. Schneider, Deborah Gustafson, Kathleen M. Weber, Audrey French, Anjali Sharma, Kathryn Anastos, Tao Wang, Todd Brown, Clary B.
Genome Medicine.2024;[Epub] CrossRef - Oregano Essential Oil as a Natural Plant Additive Affects Growth Performance and Serum Antibody Levels by Regulating the Rumen Microbiota of Calves
Zhihao Luo, Ting Liu, Dongzhu Cairang, Shuru Cheng, Jiang Hu, Bingang Shi, Hui Zhu, Huan Chen, Tao Zhang, Xuejiao Yi
Animals.2024; 14(6): 820. CrossRef - Gut Microbial Communities Are Seasonally Variable in Warm-Climate Lizards Hibernating in the Winter Months
Xiaming Zhu, Neng Jiang, Tingye Mai, Shulin Wu, Yuntao Yao, Yu Du, Chixian Lin, Longhui Lin, Xiang Ji
Microorganisms.2024; 12(10): 1974. CrossRef - Beneficial effects of American ginseng (Panax quinquefolius L.) extract residue as a feed additive on production, health status, and gastrointestinal bacteria in sika deer (Cervus nippon)
Yan Wu, Shuting Zhao, Peihe Zheng, Hanlu Liu, Zhengyi Qu, Wei Hou, Weitao Yuan, Tao Feng, Xiaofeng Zhan, Jinlong Shen, Kaiying Wang
Frontiers in Microbiology.2024;[Epub] CrossRef - The Influence of Increasing Roughage Content in the Diet on the Growth Performance and Intestinal Flora of Jinwu and Duroc × Landrace × Yorkshire Pigs
Gaili Xu, Jing Huang, Wenduo Chen, Ayong Zhao, Jianzhi Pan, Fuxian Yu
Animals.2024; 14(13): 1913. CrossRef - Higher temperatures exacerbate effects of antibiotics on methanogenesis in freshwater sediment
E. Bollinger, P. Schwilden, F. Y. Lai, R. Schulz, M. Bundschuh, S. Filker
Communications Earth & Environment.2024;[Epub] CrossRef - Negative energy balance affects perinatal ewe performance, rumen morphology, rumen flora structure, and placental function
Zhibo Wang, Peiyong Chen, Yaxu Liang, Feng Wang, Yanli Zhang
Journal of Animal Physiology and Animal Nutrition.2024; 108(6): 1747. CrossRef - Gut Microbiota and Biomarkers of Intestinal Barrier Damage in Cirrhosis
Irina Efremova, Roman Maslennikov, Oleg Medvedev, Anna Kudryavtseva, Anastasia Avdeeva, George Krasnov, Filipp Romanikhin, Mikhail Diatroptov, Maria Fedorova, Elena Poluektova, Anna Levshina, Vladimir Ivashkin
Microorganisms.2024; 12(3): 463. CrossRef - Hong Guo Ginseng Guo (HGGG) protects against kidney injury in diabetic nephropathy by inhibiting NLRP3 inflammasome and regulating intestinal flora
Shu Pan, Shan-shan Jiang, Rui Li, Bei Tian, Chun-yue Huang, Rong Wang, Yue-yue Li, Hui Zhu, Yong-fang Yuan, Xiao Hu
Phytomedicine.2024; 132: 155861. CrossRef - Effects of protein concentration and beta-adrenergic agonists on ruminal bacterial communities in finishing beef heifers
Alison P. Pfau, Madison T. Henniger, Kendall L. Samuelson, Kristin E. Hales, Clint A. Löest, Mike E. Hubbert, Amanda K. Lindholm-Perry, Amanda M. Egert-McLean, Katie M. Mason, Elizabeth A. Shepherd, Brynn H. Voy, Phillip R. Myer, Juan J Loor
PLOS ONE.2024; 19(2): e0296407. CrossRef - Exploring the modulatory effects of brown seaweed meal and extracts on intestinal microbiota and morphology of broiler chickens challenged with heat stress
Fisayo Oretomiloye, Deborah Adewole
Poultry Science.2024; 103(4): 103562. CrossRef - Intestinal microbiota and high-risk antibiotic resistance genes in wild birds with varied ecological traits: Insights from opportunistic direct sampling in Tianjin, China
Tong Liu, Yetong Shao, Xiaoke Pang, Yufei Liu, Xunqiang Mo, Zeyou Chen, Xueqiang Lu
Environmental Research.2024; 263: 120040. CrossRef - A Systematic Review of the Effect of Polyphenols on Alterations of the Intestinal Microbiota and Shared Bacterial Profiles Between Metabolic Syndrome and Acne
Sara Ilari, Saverio Nucera, Lucrezia Morabito, Rosamaria Caminiti, Valeria Mazza, Giovanna Ritorto, Sara Ussia, Lucia Carmela Passacatini, Roberta Macrì, Federica Scarano, Maria Serra, Elisabetta Scali, Jessica Maiuolo, Francesca Oppedisano, Ernesto Palma
Nutrients.2024; 16(21): 3591. CrossRef - Microbiota alterations are related to migraine food triggers and inflammatory markers in chronic migraine patients with medication overuse headache
Doga Vuralli, Merve Ceren Akgor, Hale Gok Dagidir, Pınar Onat, Meltem Yalinay, Ugur Sezerman, Hayrunnisa Bolay
The Journal of Headache and Pain.2024;[Epub] CrossRef - Integrated microbiota–host–metabolome approaches reveal adaptive ruminal changes to prolonged high-grain feeding and phytogenic supplementation in cattle
Sara Ricci, Cátia Pacífico, Susanne Kreuzer-Redmer, Ezequias Castillo-Lopez, Raul Rivera-Chacon, Arife Sener-Aydemir, Giacomo Rossi, Livio Galosi, Lucia Biagini, Heidi E Schwartz-Zimmermann, Franz Berthiller, Nicole Reisinger, Renee M Petri, Qendrim Zebel
FEMS Microbiology Ecology.2024;[Epub] CrossRef - Gastrointestinal Microbiota & Symptoms of Depression and Anxiety in Anorexia Nervosa—A Re-Analysis of the MICROBIAN Longitudinal Study
Jasmin Ketel, Miquel Bosch-Bruguera, Greta Auchter, Ulrich Cuntz, Stephan Zipfel, Paul Enck, Isabelle Mack
Nutrients.2024; 16(6): 891. CrossRef - Causal relationship between gut microbiota and gastric cancer: A two‑sample Mendelian randomization analysis
Jianling Zhang, Chunlu Dong, Yanyan Lin, Lifeng Shang, Junming Ma, Ruiping Hu, Hejing Wang
Molecular and Clinical Oncology.2024;[Epub] CrossRef - Metabolism of quercitrin in the colon and its beneficial regulatory effects on gut microbiota
Xia Meng, Chenlan Xia, Hongchen Wu, Qing Gu, Ping Li
Journal of the Science of Food and Agriculture.2024; 104(15): 9255. CrossRef - Diverse mechanisms by which chemical pollutant exposure alters gut microbiota metabolism and inflammation
Menna Teffera, Alex C. Veith, Sean Ronnekleiv-Kelly, Christopher A. Bradfield, Maria Nikodemova, Lisa Tussing-Humphreys, Kristen Malecki
Environment International.2024; 190: 108805. CrossRef - Eimeria infections of plateau pika altered the patterns of temporal alterations in gut bacterial communities
Maoping Li, Suqin Wang, Liang Zhong, Petr Heděnec, Zhaoxian Tan, Rong Wang, Xinyang Chen, Yan Zhang, Bingmin Tang, Huakun Zhou, Jiapeng Qu
Frontiers in Microbiology.2024;[Epub] CrossRef - Inhalation of 2,2′,5,5′-tetrachlorobiphenyl (PCB52) causes changes to the gut microbiome throughout the gastrointestinal tract
Laura E. Dean, Hui Wang, Amanda J. Bullert, Hui Wang, Andrea Adamcakova-Dodd, Ashutosh K. Mangalam, Peter S. Thorne, James A. Ankrum, Aloysius J. Klingelhutz, Hans-Joachim Lehmler
Journal of Hazardous Materials.2024; 480: 135999. CrossRef - Association of gut microbiome and oral cavity cancer: A two sample mendelian randomization and case-control study
Xinpeng Liu, Xinping Li, Menglan Xie, Jinyuan Guo, Xianghuai Zheng, Shanwei Shi, Qiuju Cui, Danya Zhang, Zhaoqiang Zhang, Zhiping Wang
Journal of Stomatology, Oral and Maxillofacial Surgery.2024; 125(4): 101736. CrossRef - Bridging the Gap: Harnessing Plant Bioactive Molecules to Target Gut Microbiome Dysfunctions in Amyotrophic Lateral Sclerosis
Mirela Pribac, Anca Motataianu, Sebastian Andone, Elena Mardale, Sebastian Nemeth
Current Issues in Molecular Biology.2024; 46(5): 4471. CrossRef - Temporal changes in the mouse gut bacteriota influenced by host sex, diet, and exercise
Robert A. Dowden, Lee J. Kerkhof, Paul J. Wisniewski, Max M. Häggblom, Sara C. Campbell
Journal of Applied Physiology.2024; 137(5): 1374. CrossRef - The Ruminal Microbiome Alterations Associated with Diet-Induced Milk Fat Depression and Milk Fat Globule Size Reduction in Dairy Goats
Menglu Zhang, Zhentao Liu, Kuixian Wu, Chuankai Zhang, Tong Fu, Yu Sun, Tengyun Gao, Liqiang Han
Animals.2024; 14(17): 2614. CrossRef - Oral administration of lysozyme protects against injury of ileum via modulating gut microbiota dysbiosis after severe traumatic brain injury
Weijian Yang, Caihua Xi, Haijun Yao, Qiang Yuan, Jun Zhang, Qifang Chen, Gang Wu, Jin Hu
Frontiers in Cellular and Infection Microbiology.2024;[Epub] CrossRef - Survey of the fecal microbiota of indigenous small ruminants living in different areas of Guizhou
Wei Guo, Tingmei Liu, Weiwei Wang, Yinshu Yu, André Luis Alves Neves, Mi Zhou, Xiang Chen
Frontiers in Microbiology.2024;[Epub] CrossRef -
The colibactin-producing
Escherichia coli
alters the tumor microenvironment to immunosuppressive lipid overload facilitating colorectal cancer progression and chemoresistance
Nilmara de Oliveira Alves, Guillaume Dalmasso, Darja Nikitina, Amaury Vaysse, Richard Ruez, Lea Ledoux, Thierry Pedron, Emma Bergsten, Olivier Boulard, Lora Autier, Sofian Allam, Laurence Motreff, Pierre Sauvanet, Diane Letourneur, Pragya Kashyap, Johan G
Gut Microbes.2024;[Epub] CrossRef - Firmicutes and Bacteroidetes contribute to mass gain variation in female obligate hibernators
Samuel Degregori, Gina C Johnson, Paul H Barber, Daniel T Blumstein, Elizabeth Flaherty
Journal of Mammalogy.2024; 105(1): 2. CrossRef - Changes in the Human Gut Microbiome Caused by the Short-Term Impact of Lactic Acid Bacteria Consumption in Healthy People
Mariya Gryaznova, Yuliya Smirnova, Inna Burakova, Mikhail Syromyatnikov, Pavel Chizhkov, Evgeny Popov, Vasily Popov
Probiotics and Antimicrobial Proteins.2024; 16(4): 1240. CrossRef - Characterization of the Effects of a Novel Probiotic on Salmonella Colonization of a Piglet-Derived Intestinal Microbiota Using Improved Bioreactor
Amely Grandmont, Mohamed Rhouma, Marie-Pierre Létourneau-Montminy, William Thériault, Isabelle Mainville, Yves Arcand, Roland Leduc, Bruno Demers, Alexandre Thibodeau
Animals.2024; 14(5): 787. CrossRef - INDICATORS OF THE QUALITATIVE AND QUANTITATIVE COMPOSITION OF THE GUT COMMENSAL MICROBIOTA AS BIOMARKERS OF HOMEOSTASIS (Part 1)
M.M. Ananieva, G.A. Loban, M.O. Faustova, Y.V. Chumak, S.M. Losev
Актуальні проблеми сучасної медицини: Вісник Української медичної стоматологічної академії.2024; 24(1): 239. CrossRef -
The effect of dietary zinc and zinc physiological status on the composition of the gut microbiome
in vivo
Jacquelyn Cheng, Nikolai Kolba, Elad Tako
Critical Reviews in Food Science and Nutrition.2024; 64(18): 6432. CrossRef -
Hyperbaric oxygen augments susceptibility to
C. difficile
infection by impairing gut microbiota ability to stimulate the HIF-1α-IL-22 axis in ILC3
José L. Fachi, Laís. P. Pral, Helder C. Assis, Sarah Oliveira, Vinícius R. Rodovalho, Jefferson A. C. dos Santos, Mariane F. Fernandes, Valquíria A. Matheus, Renata Sesti-Costa, Paulo J. Basso, Marina Flóro e Silva, Niels O. S. Câmara, Selma Giorgio, Marc
Gut Microbes.2024;[Epub] CrossRef - Ruminococcus gnavus in the gut: driver, contributor, or innocent bystander in steatotic liver disease?
Vik Meadows, Jayson M. Antonio, Ronaldo P. Ferraris, Nan Gao
The FEBS Journal.2024;[Epub] CrossRef - INDICATORS OF QUANTITATIVE AND QUALITATIVE COMPOSITION OF THE GUT COMMENSAL MICROBIOTA AS BIOMARKERS OF HOMEOSTASIS
M.M. Ananieva, G.A. Loban, M.O. Faustova, Y.V. Chumak, S.M. Losev
Актуальні проблеми сучасної медицини: Вісник Української медичної стоматологічної академії.2024; 24(2): 277. CrossRef - Enteromorpha prolifera Polysaccharide Alleviates Acute Alcoholic Liver Injury in C57 BL/6 Mice through the Gut–Liver Axis and NF-κB Pathway
Tingting Yan, Jinghe Sun, Yuying Zhang, Chengrong Wen, Jingfeng Yang
Journal of Agricultural and Food Chemistry.2024; 72(42): 23258. CrossRef - Chlorella and vegetable oil inclusion in diets for growing rabbits: effects on growth, digestibility, plasma metabolites, and caecal fermentations and microbiota
F. Bordignon, A. Trocino, P.J. Marín García, T. Larsen, G. Zardinoni, M. Molin, M. Birolo, P. Stevanato, G. Xiccato
animal.2024; 18(12): 101365. CrossRef - Hawthorn pectin plays a protective role in myocardial ischaemia by regulating intestinal flora and short chain fatty acids
Jiayue Lou, Baojie Zhang, Yu Zheng, Meiqi Liu, Yang Qu
Current Research in Food Science.2024; 9: 100863. CrossRef - Blackcurrants shape gut microbiota profile and reduce risk of postmenopausal osteoporosis via the gut-bone axis: Evidence from a pilot randomized controlled trial
Briana M. Nosal, Staci N. Thornton, Manije Darooghegi Mofrad, Junichi R. Sakaki, Kyle J. Mahoney, Zachary Macdonald, Lauren Daddi, Thi Dong Binh Tran, George Weinstock, Yanjiao Zhou, Elaine Choung-Hee Lee, Ock K. Chun
The Journal of Nutritional Biochemistry.2024; 133: 109701. CrossRef - Characterization of the follicular fluid microbiota based on culturomics and sequencing analysis
Wenting Wei, Yazhou Zhou, Haiyang Zuo, Min Li, Zhiyuan Pan, Bin Liu, Lu Wang, Yafang Tan, Ruifu Yang, Wei Shang, Yujing Bi, Weizhou Wang
Journal of Medical Microbiology
.2023;[Epub] CrossRef - Oral intake of Lactiplantibacillus pentosus LPG1 Produces a Beneficial Regulation of Gut Microbiota in Healthy Persons: A Randomised, Placebo-Controlled, Single-Blind Trial
Elio López-García, Antonio Benítez-Cabello, Antonio Pablo Arenas-de Larriva, Francisco Miguel Gutierrez-Mariscal, Pablo Pérez-Martínez, Elena María Yubero-Serrano, Antonio Garrido-Fernández, Francisco Noé Arroyo-López
Nutrients.2023; 15(8): 1931. CrossRef - Polysaccharides from small black soybean alleviating type 2 diabetes via modulation of gut microbiota and serum metabolism
Zhouya Bai, Xiaojun Huang, Guangjie Wu, Yanli Zhang, Hedi Xu, Yang Chen, Huayu Yang, Shaoping Nie
Food Hydrocolloids.2023; 141: 108670. CrossRef - Metatranscriptome analysis of blood in healthy individuals and irritable bowel syndrome patients
Lauma Jagare, Maija Rozenberga, Ivars Silamikelis, Laura Ansone, Ilze Elbere, Monta Briviba, Kaspars Megnis, Ilze Konrade, Ilze Birka, Zane Straume, Janis Klovins
Journal of Medical Microbiology
.2023;[Epub] CrossRef - Gut bacteria of adult and larval Cotinis nitida Linnaeus (Coleoptera: Scarabaeidae) demonstrate community differences according to respective life stage and gut region
Roy A. Kucuk, Barbara J. Campbell, Nicholas J. Lyon, Emily A. Shelby, Michael S. Caterino
Frontiers in Microbiology.2023;[Epub] CrossRef - Definition of a microbial signature as a predictor of endoscopic post-surgical recurrence in patients with Crohn’s disease
Lia Oliver, Blau Camps, David Julià-Bergkvist, Joan Amoedo, Sara Ramió-Pujol, Marta Malagón, Anna Bahí, Paola Torres, Eugeni Domènech, Jordi Guardiola, Mariona Serra-Pagès, Jesus Garcia-Gil, Xavier Aldeguer
Frontiers in Molecular Medicine.2023;[Epub] CrossRef - Integrated Analysis of the Effects of Cecal Microbiota and Serum Metabolome on Market Weights of Chinese Native Chickens
Shenghong Yang, Yongxian Yang, Xiaoxia Long, Hui Li, Fuping Zhang, Zhong Wang
Animals.2023; 13(19): 3034. CrossRef - Effects of different manganese sources on nutrient digestibility, fecal bacterial community, and mineral excretion of weaning dairy calves
Huimin Ji, Dejin Tan, Yuhua Chen, Zhiqiang Cheng, Jingwen Zhao, Miao Lin
Frontiers in Microbiology.2023;[Epub] CrossRef - Effects of an inulin fiber diet on the gut microbiome, colon, and inflammatory biomarkers in aged mice
Noah T. Hutchinson, Selena S. Wang, Laurie A. Rund, Maria Elisa Caetano-Silva, Jacob M. Allen, Rodney W. Johnson, Jeffrey A. Woods
Experimental Gerontology.2023; 176: 112164. CrossRef - Gut Site and Gut Morphology Predict Microbiome Structure and Function in Ecologically Diverse Lemurs
Lydia K. Greene, Erin A. McKenney, William Gasper, Claudia Wrampelmeier, Shivdeep Hayer, Erin E. Ehmke, Jonathan B. Clayton
Microbial Ecology.2023; 85(4): 1608. CrossRef - Metaproteomic Analysis of Gut Resistome in the Cecal Microbiota of Fattening Pigs Raised without Antibiotics
Pamornya Buthasane, Sittiruk Roytrakul, Narumon Phaonakrop, Paiboon Tunsagool, Wannapol Buthasane, Nutthee Am-in, Gunnaporn Suriyaphol, Montarop Yamabhai
Microbiology Spectrum.2023;[Epub] CrossRef - Captivity restructures the gut microbiota of François' langurs (Trachypithecus francoisi)
Fengxiang Mo, Yuhui Li, Zheng Liu, Jingjin Zheng, Zhonghao Huang
Frontiers in Microbiology.2023;[Epub] CrossRef - Effects of dietary Chinese herbal mixtures on productive performance, egg quality, immune status, caecal and offspring meconial microbiota of Wenchang breeder hens
Mengjie Liu, Jieyi Huang, Ming Ma, Gengxiong Huang, Yingwen Zhang, Yiqing Ding, Qian Qu, Weijie Lv, Shining Guo
Frontiers in Veterinary Science.2023;[Epub] CrossRef - Associations of the gut microbiome with psychoneurological symptom cluster in women with gynecologic cancers: a longitudinal study
Zahra Amirkhanzadeh Barandouzi, Tony Eng, Joseph Shelton, Namita Khanna, Isabelle Scott, Rebecca Meador, Deborah Watkins Bruner
Supportive Care in Cancer.2023;[Epub] CrossRef - Homemade blenderized tube feeding improves gut microbiome communities in children with enteral nutrition
Sayaka Katagiri, Yujin Ohsugi, Takahiko Shiba, Kanako Yoshimi, Kazuharu Nakagawa, Yuki Nagasawa, Aritoshi Uchida, Anhao Liu, Peiya Lin, Yuta Tsukahara, Takanori Iwata, Haruka Tohara
Frontiers in Microbiology.2023;[Epub] CrossRef - Drinking Warm Water Promotes Performance by Regulating Ruminal Microbial Composition and Serum Metabolites in Yak Calves
Tianxu Liu, Qianqian Wang, Chenxi Gao, Shenfei Long, Tengfei He, Zhenlong Wu, Zhaohui Chen
Microorganisms.2023; 11(8): 2092. CrossRef - Effect of Clindamycin on Intestinal Microbiome and Miltefosine Pharmacology in Hamsters Infected with Leishmania infantum
Ana Isabel Olías-Molero, Pedro Botías, Montserrat Cuquerella, Jesús García-Cantalejo, Emilia Barcia, Susana Torrado, Juan José Torrado, José María Alunda
Antibiotics.2023; 12(2): 362. CrossRef - Gut Microbiome Profiling of the Endangered Southern Greater Glider (Petauroides volans) after the 2019–2020 Australian Megafire
Jordyn Clough, Sibylle Schwab, Katarina Mikac
Animals.2023; 13(22): 3583. CrossRef - Orally Administrated Lactiplantibacillus plantarum BGAN8-Derived EPS-AN8 Ameliorates Cd Hazards in Rats
Emilija Brdarić, Dušanka Popović, Svetlana Soković Bajić, Dina Tucović, Jelena Mutić, Maja Čakić-Milošević, Slađana Đurđić, Maja Tolinački, Aleksandra Popov Aleksandrov, Nataša Golić, Ivana Mirkov, Milica Živković
International Journal of Molecular Sciences.2023; 24(3): 2845. CrossRef - Ligularia virgaurea improved nutrient digestion, ruminal fermentation, and bacterial composition in Tibetan sheep grazing on the Qinghai–Tibetan plateau in winter
Xiongxiong Cui, Zhaofeng Wang, Qingshan Fan, Shenghua Chang, Tianhai Yan, Fujiang Hou
Animal Feed Science and Technology.2023; 299: 115628. CrossRef - Characterization of the Gut Microbiota in Urban Thai Individuals Reveals Enterotype-Specific Signature
Jiramaetha Sinsuebchuea, Prasobsook Paenkaew, Montree Wutthiin, Thatchawanon Nantanaranon, Kiattiyot Laeman, Weerayuth Kittichotirat, Songsak Wattanachaisaereekul, Sudarat Dulsawat, Montira Nopharatana, Namol Vorapreeda, Sakarindr Bhumiratana, Supapon Che
Microorganisms.2023; 11(1): 136. CrossRef - Lignocellulose degradation by rumen bacterial communities: New insights from metagenome analyses
Javad Gharechahi, Mohammad Farhad Vahidi, Golandam Sharifi, Shohreh Ariaeenejad, Xue-Zhi Ding, Jian-Lin Han, Ghasem Hosseini Salekdeh
Environmental Research.2023; 229: 115925. CrossRef - Associations between the Gut Microbiome and Migraines in Children Aged 7-18 Years: An Analysis of the American Gut Project Cohort
Jinbing Bai, Natalie Shen, Yanqun Liu
Pain Management Nursing.2023; 24(1): 35. CrossRef - Invited review: Rumen modifiers in today's dairy rations
J.L. Firkins, K.E. Mitchell
Journal of Dairy Science.2023; 106(5): 3053. CrossRef - Exploration of the Gut Microbiome in Thai Patients with Major Depressive Disorder Shows a Specific Bacterial Profile with Depletion of the Ruminococcus Genus as a Putative Biomarker
Michael Maes, Asara Vasupanrajit, Ketsupar Jirakran, Pavit Klomkliew, Prangwalai Chanchaem, Chavit Tunvirachaisakul, Sunchai Payungporn
Cells.2023; 12(9): 1240. CrossRef - Associations between Accelerometer-Measured Physical Activity and Fecal Microbiota in Adults with Overweight and Obesity
RILEY L. HUGHES, DOMINIKA M. PINDUS, NAIMAN A. KHAN, NICHOLAS A. BURD, HANNAH D. HOLSCHER
Medicine & Science in Sports & Exercise.2023; 55(4): 680. CrossRef - Revealing the developmental characterization of rumen microbiome and its host in newly received cattle during receiving period contributes to formulating precise nutritional strategies
Yanjiao Li, Kang Mao, Yitian Zang, Guwei Lu, Qinghua Qiu, Kehui Ouyang, Xianghui Zhao, Xiaozhen Song, Lanjiao Xu, Huan Liang, Mingren Qu
Microbiome.2023;[Epub] CrossRef - Analysis of microbial colonies from the first-pass meconium of healthy neonates: Comparison of vaginally and cesarean section born
Hueng-Chuen Fan, Ying-Ru Pan, Pei-Ling Lai, Win-Lin Yeh, Shu-Wei Hu, Ming-Yuan Hsu, Wei-Kian Chua
Tungs' Medical Journal.2023; 17(2): 76. CrossRef - Food desert residence has limited impact on veteran fecal microbiome composition: a U.S. Veteran Microbiome Project study
Diana P. Brostow, Meghan Donovan, Molly Penzenik, Christopher E. Stamper, Talia Spark, Christopher A. Lowry, Suzanne L. Ishaq, Andrew J. Hoisington, Lisa A. Brenner, Thomas J. Sharpton
mSystems.2023;[Epub] CrossRef - The gut microbiome dysbiosis is recovered by restoring a normal diet in hypercholesterolemic pigs
Leonie Schoch, Pablo Sutelman, Rosa Suades, Lina Badimon, Isabel Moreno‐Indias, Gemma Vilahur
European Journal of Clinical Investigation.2023;[Epub] CrossRef - Partially Alternative Feeding with Fermented Distillers’ Grains Modulates Gastrointestinal Flora and Metabolic Profile in Guanling Cattle
Guangxia He, Chao Chen, Shihui Mei, Ze Chen, Rong Zhang, Tiantian Zhang, Duhan Xu, Mingming Zhu, Xiaofen Luo, Chengrong Zeng, Bijun Zhou, Kaigong Wang, Erpeng Zhu, Zhentao Cheng
Animals.2023; 13(22): 3437. CrossRef - Dysbiosis in gastrointestinal pathophysiology: Role of the gut microbiome in Gulf War Illness
Elise Slevin, Sachiko Koyama, Kelly Harrison, Ying Wan, James E. Klaunig, Chaodong Wu, Ashok K. Shetty, Fanyin Meng
Journal of Cellular and Molecular Medicine.2023; 27(7): 891. CrossRef - Gastrointestinal Degradation and Toxicity of Disinfection Byproducts in Drinking Water Using In Vitro Models and the Roles of Gut Microbiota
Jinbao Yin, Dingxin Li, Tianming Zheng, Bin Hu, Peifang Wang
Environmental Science & Technology.2023; 57(43): 16219. CrossRef - Enhanced lupus progression in alcohol‐administered Fc gamma receptor‐IIb–deficiency lupus mice, partly through leaky gut‐induced inflammation
Wiwat Chancharoenthana, Supitcha Kamolratanakul, Phatcharapon Yiengwattananon, Pornpimol Phuengmaung, Kanyarat Udompornpitak, Wilasinee Saisorn, Pratsanee Hiengrach, Peerapat Visitchanakun, Marcus J Schultz, Asada Leelahavanichkul
Immunology & Cell Biology.2023; 101(8): 746. CrossRef - Deciphering salivary microbiome signature in Crohn’s disease patients with different factors contributing to dysbiosis
Hala Elzayat, Talha Malik, Haifa Al-Awadhi, Mazen Taha, Gehad Elghazali, Farah Al-Marzooq
Scientific Reports.2023;[Epub] CrossRef - Apolipoprotein E gene variants shape the association between dietary fibre intake and cognitive decline risk in community-dwelling older adults
Andrea Unión-Caballero, Tomás Meroño, Cristina Andrés-Lacueva, Nicole Hidalgo-Liberona, Montserrat Rabassa, Stefania Bandinelli, Luigi Ferrucci, Massimiliano Fedecostante, Raúl Zamora-Ros, Antonio Cherubini
Age and Ageing.2023;[Epub] CrossRef - Alfalfa hay substitution for wheat straw improves beef quality via rumen microflora alteration
Zimin Gao, Boshuai Liu, Shaokai La, Defeng Li, Xiaoyan Zhu, Hao Sun, Sen Ma, Yalei Cui, Yinghua Shi
Heliyon.2023; 9(10): e20803. CrossRef - Altered gut microbiota in older adults with mild cognitive impairment: a case-control study
Kang-Chen Fan, Chen-Ching Lin, Yi-Chien Liu, Yi-Ping Chao, Yen-Jun Lai, Yen-Ling Chiu, Yi-Fang Chuang
Frontiers in Aging Neuroscience.2023;[Epub] CrossRef - Changes of gut microbiota under different nutritional methods in elderly patients with severe COVID-19 and their relationship with prognosis
Jiawei Zhang, Jiaxin Deng, Juan Li, Yuping Su, Jiancong Hu, Dezheng Lin, Mingli Su, Yongcheng Chen, Sen Liao, Xuhao Bai, Miwei Lv, Tian Xu, Qinghua Zhong, Xuefeng Guo
Frontiers in Immunology.2023;[Epub] CrossRef - Stall-Feeding of Sheep on Restricted Grazing: Effects on Performance and Serum Metabolites, Ruminal Fermentation, and Fecal Microbiota
Mengyu Zhao, Xiaoan Zhang, Yao Chen, Chunhuan Ren, Yiming Sun, Penghui Wang, Xiao Cheng, Zijun Zhang, Jiahong Chen, Yafeng Huang
Animals.2023; 13(16): 2644. CrossRef - Causal Link between Gut Microbiota, Neurophysiological States, and Bone Diseases: A Comprehensive Mendelian Randomization Study
Shaoting Luo, Zhiyang Chen, Linfang Deng, Yufan Chen, Weizheng Zhou, Federico Canavese, Lianyong Li
Nutrients.2023; 15(18): 3934. CrossRef - Individual and combined effects of fluoride and arsenic on gut bacteria: a recent update
Sunanda Mukherjee, Olivia Sarkar, Ansuman Chattopadhyay
The Nucleus.2023;[Epub] CrossRef - Microbe-mineral interactions in the Plastisphere: Coastal biogeochemistry and consequences for degradation of plastics
Maya S. Dodhia, Kelsey L. Rogers, Victor Fernández-Juárez, Joan A. Carreres-Calabuig, Carolin R. Löscher, Amandine A. Tisserand, Nynke Keulen, Lasse Riemann, Yvonne Shashoua, Nicole R. Posth
Frontiers in Marine Science.2023;[Epub] CrossRef - Different roles of host and habitat in determining the microbial communities of plant-feeding true bugs
Zi-Wen Yang, Jiu-Yang Luo, Yu Men, Zhi-Hui Liu, Zi-Kai Zheng, Yan-Hui Wang, Qiang Xie
Microbiome.2023;[Epub] CrossRef - Gut Microbiome Transplants and Their Health Impacts across Species
Benjamin H. Levine, Jessica M. Hoffman
Microorganisms.2023; 11(6): 1488. CrossRef - Causal effects of gut microbiome on autoimmune liver disease: a two-sample Mendelian randomization study
Yugang Fu, Jiacheng Li, Yingying Zhu, Chong Chen, Jing Liu, Simin Gu, Yiyuan Zheng, Yong Li
BMC Medical Genomics.2023;[Epub] CrossRef - Targeting gut microbiota to alleviate neuroinflammation in Alzheimer’s disease
Vu Thu Thuy Nguyen, Kristina Endres
Advanced Drug Delivery Reviews.2022; 188: 114418. CrossRef - Host Species Affects Bacterial Evenness, but Not Diversity: Comparison of Fecal Bacteria of Cows and Goats Offered the Same Diet
Tiziana Maria Mahayri, Kateřina Olša Fliegerová, Silvana Mattiello, Stefania Celozzi, Jakub Mrázek, Chahrazed Mekadim, Hana Sechovcová, Simona Kvasnová, Elie Atallah, Giuseppe Moniello
Animals.2022; 12(16): 2011. CrossRef - Zinc Biofortified Cowpea (Vigna unguiculata L. Walp.) Soluble Extracts Modulate Assessed Cecal Bacterial Populations and Gut Morphology In Vivo (Gallus gallus)
Mariana Juste Contin Gomes, Hércia Stampini Duarte Martino, Nikolai Kolba, Jacquelyn Cheng, Nikita Agarwal, Maurisrael de Moura Rocha, Elad Tako
Frontiers in Bioscience-Landmark.2022;[Epub] CrossRef - Microbial gut evaluation in an angolan paediatric population with sickle cell disease
Mariana Delgadinho, Catarina Ginete, Brígida Santos, Joana Mendes, Armandina Miranda, Jocelyne Vasconcelos, Miguel Brito
Journal of Cellular and Molecular Medicine.2022; 26(21): 5360. CrossRef -
Survival Strategies and Metabolic Interactions between Ruminococcus gauvreauii and
Ruminococcoides bili
, Isolated from Human Bile
Natalia Molinero, Elena Conti, Alan W. Walker, Abelardo Margolles, Sylvia H. Duncan, Susana Delgado, Jeffrey A. Gralnick
Microbiology Spectrum.2022;[Epub] CrossRef - Chlorogenic acid improves growth performance of weaned rabbits via modulating the intestinal epithelium functions and intestinal microbiota
Jiali Chen, Zhicheng Song, Rongmei Ji, Yongxu Liu, Hong Zhao, Lei Liu, Fuchang Li
Frontiers in Microbiology.2022;[Epub] CrossRef - Changes to the microbiome of alfalfa during the growing season and after ensiling with Lentilactobacillus buchneri and Lentilactobacillus hilgardii inoculant
Pascal Drouin, Julien Tremblay, Érica Benjamim da Silva, Emmanuelle Apper
Journal of Applied Microbiology.2022; 133(4): 2331. CrossRef - Evaluation of Antioxidant Capacity and Gut Microbiota Modulatory Effects of Different Kinds of Berries
Jiebiao Chen, Yichen Shu, Yanhong Chen, Zhiwei Ge, Changfeng Zhang, Jinping Cao, Xian Li, Yue Wang, Chongde Sun
Antioxidants.2022; 11(5): 1020. CrossRef - Altered Immunoglobulin Repertoire and Decreased IgA Somatic Hypermutation in the Gut during Chronic HIV-1 Infection
Sean T. Jones, Kejun Guo, Emily H. Cooper, Stephanie M. Dillon, Cheyret Wood, David H. Nguyen, Guannan Shen, Bradley S. Barrett, Daniel N. Frank, Miranda Kroehl, Edward N. Janoff, Katerina Kechris, Cara C. Wilson, Mario L. Santiago, Frank Kirchhoff
Journal of Virology.2022;[Epub] CrossRef - Effects of lactic acid-producing bacteria as direct-fed microbials on the ruminal microbiome
H.F. Monteiro, A.L.J. Lelis, P. Fan, B. Calvo Agustinho, R.R. Lobo, J.A. Arce-Cordero, X. Dai, K.C. Jeong, A.P. Faciola
Journal of Dairy Science.2022; 105(3): 2242. CrossRef - Saccharomyces cerevisiae boulardiiCNCM I-1079 supplementation in finishing male pigs helps to cope with heat stress through feeding behaviour and gut microbiota modulation
Etienne Labussière, Caroline Achard, Serge Dubois, Sylvie Combes, Mathieu Castex, David Renaudeau
British Journal of Nutrition.2022; 127(3): 353. CrossRef - Specific Alterations of Gut Microbiota in Chinese Patients with Hypertension: A Systematic Review and Meta-Analysis
Yunlong Qin, Jin Zhao, Yuwei Wang, Ming Bai, Shiren Sun
Kidney and Blood Pressure Research.2022; 47(7): 433. CrossRef - 2-Hydroxy-4-(Methylthio) Butanoic Acid Isopropyl Ester Supplementation Altered Ruminal and Cecal Bacterial Composition and Improved Growth Performance of Finishing Beef Cattle
Xiaoli Qin, Depeng Zhang, Xinjun Qiu, Kai Zhao, Siyu Zhang, Chunlan Liu, Lianqiang Lu, Yafang Cui, Changxiao Shi, Zhiming Chen, Rikang Hao, Yingqi Li, Shunran Yang, Lina Wang, Huili Wang, Binghai Cao, Huawei Su
Frontiers in Nutrition.2022;[Epub] CrossRef - Heat Stress Affects Jejunal Immunity of Yellow-Feathered Broilers and Is Potentially Mediated by the Microbiome
Wen-Chao Liu, Meng-Yi Huang, Balamuralikrishnan Balasubramanian, Rajesh Jha
Frontiers in Physiology.2022;[Epub] CrossRef - Red Raspberry and Fructo-Oligosaccharide Supplementation, Metabolic Biomarkers, and the Gut Microbiota in Adults with Prediabetes: A Randomized Crossover Clinical Trial
Xuhuiqun Zhang, Anqi Zhao, Amandeep K Sandhu, Indika Edirisinghe, Britt M Burton-Freeman
The Journal of Nutrition.2022; 152(6): 1438. CrossRef - Effects of acetate, propionate, and pH on volatile fatty acid thermodynamics in continuous cultures of ruminal contents
Meng M. Li, S. Ghimire, B.A. Wenner, R.A. Kohn, J.L. Firkins, B. Gill, M.D. Hanigan
Journal of Dairy Science.2022; 105(11): 8879. CrossRef - Contribution of gut microbiomes and their metabolomes to the performance of Dorper and Tan sheep
Yuhao Ma, Xue Yang, Guoying Hua, Xiaotian Deng, Tianlan Xia, Xinhai Li, Dengzhen Feng, Xuemei Deng
Frontiers in Microbiology.2022;[Epub] CrossRef - Spotlight on the Gut Microbiome in Menopause: Current Insights
Brandilyn Peters, Nanette Santoro, Robert Kaplan, Qibin Qi
International Journal of Women's Health.2022; Volume 14: 1059. CrossRef - Combinations of bacterial cultures, exogenous enzymes, and yeast-based feed additives and their impact on ruminal microbiome
J A Arce-Cordero, S L Bennett, T Liu, A Ravelo, R R Lobo, K C Jeong, A P Faciola
Translational Animal Science.2022;[Epub] CrossRef - Ingestion of remediated lead-contaminated soils affects the fecal microbiome of mice
S. Elizabeth George, Joseph James, Richard Devereux, Yongshan Wan, Gary L. Diamond, Karen D. Bradham, Kirk G. Scheckel, David J. Thomas
Science of The Total Environment.2022; 837: 155797. CrossRef - Exposure to crop production alters cecal prokaryotic microbiota, inflates virulome and resistome in wild prairie grouse
Serguei V. Drovetski, Brian K. Schmidt, Jonas E. Lai, Michael S. Gross, Michelle L. Hladik, Kenan O. Matterson, Natalie K. Karouna-Renier
Environmental Pollution.2022; 306: 119418. CrossRef - Saccharomyces Boulardii Ameliorates Non-alcoholic Steatohepatitis in Mice Induced by a Methionine-Choline-Deficient Diet Through Gut-Liver Axis
An-Ming Yang, Chien-Yu Lin, Shih-Hao Liu, Guan-Da Syu, Hao-Jhe Sun, Kuei-Chuan Lee, Han-Chieh Lin, Ming-Chih Hou
Frontiers in Microbiology.2022;[Epub] CrossRef - Intestinal Dysbiosis in Patients with Histamine Intolerance
Sònia Sánchez-Pérez, Oriol Comas-Basté, Adriana Duelo, M. Teresa Veciana-Nogués, Mercedes Berlanga, M. Luz Latorre-Moratalla, M. Carmen Vidal-Carou
Nutrients.2022; 14(9): 1774. CrossRef - Cellulolytic bacteria in the large intestine of mammals
Alicia Froidurot, Véronique Julliand
Gut Microbes.2022;[Epub] CrossRef - Muskoxen homogenise soil microbial communities and affect the abundance of methanogens and methanotrophs
Marie Rønne Aggerbeck, Tue Kjærgaard Nielsen, Jesper Bruun Mosbacher, Niels Martin Schmidt, Lars Hestbjerg Hansen
Science of The Total Environment.2022; 827: 153877. CrossRef - Integrated Fecal Microbiome and Metabolomics Reveals a Novel Potential Biomarker for Predicting Tibial Dyschondroplasia in Chickens
Shucheng Huang, Chaodong Zhang, Tingting Xu, Aftab Shaukat, Yanfeng He, Pan Chen, Luxi Lin, Ke Yue, Qinqin Cao, Xishuai Tong
Frontiers in Physiology.2022;[Epub] CrossRef - Comparison of Metabolites and Gut Microbes between Patients with Ulcerative Colitis and Healthy Individuals for an Integrative Medicine Approach to Ulcerative Colitis—A Pilot Observational Clinical Study (STROBE Compliant)
Cheol-Hyun Kim, Young-Ung Lee, Kwang-Ho Kim, Sunny Kang, Geon-Hui Kang, Hongmin Chu, Sangkwan Lee
Diagnostics.2022; 12(8): 1969. CrossRef - The association of hyperketonemia with fecal and rumen microbiota at time of diagnosis in a case-control cohort of early lactation cows
Asha M. Miles, Jessica A. A. McArt, Svetlana F. Lima, Rafael C. Neves, Erika Ganda
BMC Veterinary Research.2022;[Epub] CrossRef - Gut metagenome profile of the Nunavik Inuit youth is distinct from industrial and non-industrial counterparts
Jehane Y. Abed, Thibaud Godon, Fadwa Mehdaoui, Pier-Luc Plante, Maurice Boissinot, Michel G. Bergeron, Richard E. Bélanger, Gina Muckle, Natalia Poliakova, Pierre Ayotte, Jacques Corbeil, Elsa Rousseau
Communications Biology.2022;[Epub] CrossRef - The influence of exercise training volume alterations on the gut microbiome in highly‐trained middle‐distance runners
Jonathan Craven, Amanda J. Cox, Phillip Bellinger, Ben Desbrow, Christopher Irwin, Jena Buchan, Danielle McCartney, Surendran Sabapathy
European Journal of Sport Science.2022; 22(8): 1222. CrossRef - Hypomagnetic Field Exposure Affecting Gut Microbiota, Reactive Oxygen Species Levels, and Colonic Cell Proliferation in Mice
Aisheng Zhan, Yukai Luo, Huafeng Qin, Wei Lin, Lanxiang Tian
Bioelectromagnetics.2022; 43(8): 462. CrossRef - Analysis of 16S rRNA gene sequencing data for the taxonomic characterization of the vaginal and the fecal microbial communities in Hanwoo
Soyoung Choi, Jihye Cha, Minji Song, JuHwan Son, Mi-Rim Park, Yeong-jo Lim, Tae-Hun Kim, Kyung-Tai Lee, Woncheoul Park
Animal Bioscience.2022; 35(11): 1808. CrossRef - Paeonia lactiflora Pallas extract alleviates antibiotics and DNCB-induced atopic dermatitis symptoms by suppressing inflammation and changing the gut microbiota composition in mice
Seo Yeon Lee, Se Hyang Hong, Hyo In Kim, Jin Mo Ku, Yu-Jeong Choi, Min-Jeong Kim, Seong-Gyu Ko
Biomedicine & Pharmacotherapy.2022; 154: 113574. CrossRef - Influence of free and immobilized chitosan on a defined human gut microbial ecosystem
María Ruiz-Rico, Simone Renwick, Sarah J. Vancuren, Avery V. Robinson, Connor Gianetto-Hill, Emma Allen-Vercoe, José M. Barat
Food Research International.2022; 161: 111890. CrossRef - How to Maintain a Healthy Gut Microbiome in Children with Cancer? Gut Microbiome Association with Diet in Children with Solid Tumors Postchemotherapy
Shuqi Zhou, Melissa Martin, Christie Powell, Kathryn S. Sutton, Bradley George, Thomas Olson, Konstantinos T. Konstantinidis, Deborah W. Bruner, Jinbing Bai
OMICS: A Journal of Integrative Biology.2022; 26(4): 236. CrossRef - Influence of Chlorella vulgaris on growth, digestibility and gut morphology and microbiota of weaned piglet
Cátia F. Martins, Paolo Trevisi, Diogo F. Coelho, Federico Correa, David M. Ribeiro, Cristina M. Alfaia, Mário Pinho, José M. Pestana, Miguel P. Mourato, André M. Almeida, Carlos M. G. A. Fontes, João P. B. Freire, José A. M. Prates
Scientific Reports.2022;[Epub] CrossRef - Comparative analysis of gut microbial composition and potential functions in captive forest and alpine musk deer
Feng Jiang, Pengfei Song, Haijing Wang, Jingjie Zhang, Daoxin Liu, Zhenyuan Cai, Hongmei Gao, Xiangwen Chi, Tongzuo Zhang
Applied Microbiology and Biotechnology.2022; 106(3): 1325. CrossRef - Seasonal and geographical differences in the ruminal microbial and chloroplast composition of sika deer (Cervus nippon) in Japan
Shinpei Kawarai, Kensuke Taira, Ayako Shimono, Tsuyoshi Takeshita, Shiro Takeda, Wataru Mizunoya, Yumiko Yamazaki, Shigeharu Moriya, Masato Minami
Scientific Reports.2022;[Epub] CrossRef - Consistent Alterations of Human Fecal Microbes After Transplantation into Germ-Free Mice
Yanze Li, Wenming Cao, Na L Gao, Xing-Ming Zhao, Wei-Hua Chen
Genomics, Proteomics & Bioinformatics.2022; 20(2): 382. CrossRef - Meconium Microbiota Composition and Association with Birth Delivery Mode
Ana K. Rocha-Viggiano, Saray Aranda-Romo, Mariana Salgado-Bustamante, Cesaré Ovando-Vázquez, Jian Wu
Advanced Gut & Microbiome Research.2022; 2022: 1. CrossRef - Characterization of presence and activity of microRNAs in the rumen of cattle hints at possible host-microbiota cross-talk mechanism
Sara Ricci, Renée M. Petri, Cátia Pacífico, Ezequias Castillo-Lopez, Raul Rivera-Chacon, Arife Sener-Aydemir, Nicole Reisinger, Qendrim Zebeli, Susanne Kreuzer-Redmer
Scientific Reports.2022;[Epub] CrossRef - Commensal Intestinal Protozoa—Underestimated Members of the Gut Microbial Community
Magdalena Dubik, Bartosz Pilecki, Jesper Bonnet Moeller
Biology.2022; 11(12): 1742. CrossRef - Fecal microbiome of horses transitioning between warm-season and cool-season grass pasture within integrated rotational grazing systems
Jennifer R. Weinert-Nelson, Amy S. Biddle, Carey A. Williams
Animal Microbiome.2022;[Epub] CrossRef - The gut microbiota as a target to improve health conditions in a confined environment
Zheng Chen, ZiYing Wang, Dan Li, Beiwei Zhu, Yongjun Xia, Guangqiang Wang, Lianzhong Ai, Chunhong Zhang, Chuan Wang
Frontiers in Microbiology.2022;[Epub] CrossRef - Characterization of rumen, fecal, and milk microbiota in lactating dairy cows
Jenna R. Williamson, Todd R. Callaway, Jeferson M. Lourenco, Valerie E. Ryman
Frontiers in Microbiology.2022;[Epub] CrossRef - Analysis of Faecal Microbiota and Small ncRNAs in Autism: Detection of miRNAs and piRNAs with Possible Implications in Host–Gut Microbiota Cross-Talk
Federica Chiappori, Francesca Anna Cupaioli, Arianna Consiglio, Noemi Di Nanni, Ettore Mosca, Vito Flavio Licciulli, Alessandra Mezzelani
Nutrients.2022; 14(7): 1340. CrossRef - Microbiota Composition of Mucosa and Interactions between the Microbes of the Different Gut Segments Could Be a Factor to Modulate the Growth Rate of Broiler Chickens
Valéria Farkas, Gábor Csitári, László Menyhárt, Nikoletta Such, László Pál, Ferenc Husvéth, Mohamed Ali Rawash, Ákos Mezőlaki, Károly Dublecz
Animals.2022; 12(10): 1296. CrossRef - Comparative Analysis of Gut Microbial Composition and Functions in Przewalski’s Gazelle (Procapra przewalskii) From Various Habitats
Jingjie Zhang, Hongmei Gao, Feng Jiang, Daoxin Liu, Yuansheng Hou, Xiangwen Chi, Wen Qin, Pengfei Song, Zhenyuan Cai, Tongzuo Zhang
Frontiers in Microbiology.2022;[Epub] CrossRef - The primate gut mycobiome-bacteriome interface is impacted by environmental and subsistence factors
Ashok K. Sharma, Sam Davison, Barbora Pafco, Jonathan B. Clayton, Jessica M. Rothman, Matthew R. McLennan, Marie Cibot, Terence Fuh, Roman Vodicka, Carolyn Jost Robinson, Klara Petrzelkova, Andres Gomez
npj Biofilms and Microbiomes.2022;[Epub] CrossRef - A high-risk gut microbiota configuration associates with fatal hyperinflammatory immune and metabolic responses to SARS-CoV-2
Werner C. Albrich, Tarini Shankar Ghosh, Sinead Ahearn-Ford, Flora Mikaeloff, Nonhlanhla Lunjani, Brian Forde, Noémie Suh, Gian-Reto Kleger, Urs Pietsch, Manuel Frischknecht, Christian Garzoni, Rossella Forlenza, Mary Horgan, Corinna Sadlier, Tommaso Roch
Gut Microbes.2022;[Epub] CrossRef - Gut Health and Microbiota in Out-of-Season Atlantic Salmon (Salmo salar L.) Smolts Before and After Seawater Transfer Under Commercial Arctic Conditions: Modulation by Functional Feed Ingredients
Jie Wang, Alexander Jaramillo-Torres, Yanxian Li, Øyvind Jakobsen Brevik, Jan Vidar Jakobsen, Trond M. Kortner, Åshild Krogdahl
Frontiers in Marine Science.2022;[Epub] CrossRef - Bacterial communities in the gastrointestinal tract segments of helminth-resistant and helminth-susceptible sheep
Erwin A. Paz, Eng Guan Chua, Shamshad Ul Hassan, Johan C. Greeff, Dieter G. Palmer, Shimin Liu, Binit Lamichhane, Néstor Sepúlveda, Junhua Liu, Chin Yen Tay, Graeme B. Martin
Animal Microbiome.2022;[Epub] CrossRef - Effects of spatially heterogeneous warming on gut microbiota, nutrition and gene flow of a heat-sensitive ungulate population
Shiyu Chen, Marcel Holyoak, Hui Liu, Heng Bao, Yingjie Ma, Hongliang Dou, Guangshun Jiang
Science of The Total Environment.2022; 806: 150537. CrossRef - Albuca Bracteate Polysaccharides Synergistically Enhance the Anti-Tumor Efficacy of 5-Fluorouracil Against Colorectal Cancer by Modulating β-Catenin Signaling and Intestinal Flora
Xinyu Yuan, Jiao Xue, Yingxia Tan, Qingguo Yang, Ziyan Qin, Xiaodong Bao, Shengkai Li, Liangliang Pan, Ziqing Jiang, Yu Wang, Yongliang Lou, Lei Jiang, Jimei Du
Frontiers in Pharmacology.2021;[Epub] CrossRef - The Impact of Enriched Resistant Starch Type‐2 Cookies on the Gut Microbiome in Hemodialysis Patients: A Randomized Controlled Trial
Julie Ann Kemp, Bruna Regis de Paiva, Henrique Fragoso dos Santos, Hugo Emiliano de Jesus, Hannah Craven, Umer Z. Ijaz, Natalia Alvarenga Borges, Paul G. Shiels, Denise Mafra
Molecular Nutrition & Food Research.2021;[Epub] CrossRef - Gut microbiota alterations are distinct for primary colorectal cancer and hepatocellular carcinoma
Wei Jia, Cynthia Rajani, Hongxi Xu, Xiaojiao Zheng
Protein & Cell.2021; 12(5): 374. CrossRef - Flexibility and resilience of great tit (Parus major) gut microbiomes to changing diets
Kasun H. Bodawatta, Inga Freiberga, Katerina Puzejova, Katerina Sam, Michael Poulsen, Knud A. Jønsson
Animal Microbiome.2021;[Epub] CrossRef - Ruminococcoides bili gen. nov., sp. nov., a bile-resistant bacterium from human bile with autolytic behavior
Natalia Molinero, Elena Conti, Borja Sánchez, Alan W. Walker, Abelardo Margolles, Sylvia H. Duncan, Susana Delgado
International Journal of Systematic and Evolutionary Microbiology.2021;[Epub] CrossRef - The potential of outdoor environments to supply beneficial butyrate-producing bacteria to humans
Joel E. Brame, Craig Liddicoat, Catherine A. Abbott, Martin F. Breed
Science of The Total Environment.2021; 777: 146063. CrossRef - A new landscape of rabbit gut microbiota shaped by the infection of precocious parasites of Eimeria intestinalis
Chao Li, Xianyong Liu, Geru Tao, Yunzhou Wang, Shaoqiang Wu, Jingxia Suo, Yanli Lv, Fang Yu, Xun Suo
Veterinary Parasitology.2021; 300: 109579. CrossRef - Co-digestive performance of food waste and hydrothermal pretreated corn cob
Meng Gao, Huijing Zou, Wenjing Tian, Dezhi Shi, Hongxiang Chai, Li Gu, Qiang He, Walter Z. Tang
Science of The Total Environment.2021; 768: 144448. CrossRef -
Fecal Metabolome Signature in the HIV-1 Elite Control Phenotype: Enrichment of Dipeptides Acts as an HIV-1 Antagonist but a
Prevotella
Agonist
Maike Sperk, Anoop T. Ambikan, Shilpa Ray, Kamal Singh, Flora Mikaeloff, Rafael Ceña Diez, Ashwathy Narayanan, Jan Vesterbacka, Piotr Nowak, Anders Sönnerborg, Ujjwal Neogi, Viviana Simon
Journal of Virology.2021;[Epub] CrossRef - Transformation of fish waste protein to Hermetia illucens protein improves the efficacy of poultry by-products in the culture of juvenile barramundi, Lates calcarifer
Md Reaz Chaklader, Janet Howieson, Md Javed Foysal, Ravi Fotedar
Science of The Total Environment.2021; 796: 149045. CrossRef - Analysis of appendectomy samples identified dysbiosis in acute appendicitis
Shinya MUNAKATA, Mari TOHYA, Hirokazu MATSUZAWA, Yuki TSUCHIYA, Kota AMEMIYA, Toshiaki HAGIWARA, Daisuke MOTOOKA, Shota NAKAMURA, Kazuhiro SAKAMOTO, Shin WATANABE
Bioscience of Microbiota, Food and Health.2021; 40(2): 92. CrossRef - Conditions stimulating neutral detergent fiber degradation by dosing branched-chain volatile fatty acids. III: Relation with solid passage rate and pH on prokaryotic fatty acid profile and community in continuous culture
Y. Roman-Garcia, K.E. Mitchell, C. Lee, M.T. Socha, T. Park, B.A. Wenner, J.L. Firkins
Journal of Dairy Science.2021; 104(9): 9868. CrossRef - In-Feed Supplementation of Resin Acid-Enriched Composition Modulates Gut Microbiota, Improves Growth Performance, and Reduces Post-Weaning Diarrhea and Gut Inflammation in Piglets
Md Karim Uddin, Shah Hasan, Md. Rayhan Mahmud, Olli Peltoniemi, Claudio Oliviero
Animals.2021; 11(9): 2511. CrossRef - Insights into the removal of pharmaceutically active compounds from sewage sludge by two-stage mesophilic anaerobic digestion
M.J. Gallardo-Altamirano, P. Maza-Márquez, N. Montemurro, S. Pérez, B. Rodelas, F. Osorio, C. Pozo
Science of The Total Environment.2021; 789: 147869. CrossRef - Marked Seasonal Variation in Structure and Function of Gut Microbiota in Forest and Alpine Musk Deer
Feng Jiang, Hongmei Gao, Wen Qin, Pengfei Song, Haijing Wang, Jingjie Zhang, Daoxin Liu, Dong Wang, Tongzuo Zhang
Frontiers in Microbiology.2021;[Epub] CrossRef - Environmentally enriched housing conditions affect pig welfare, immune system and gut microbiota in early life
Caifang Wen, Ingrid van Dixhoorn, Dirkjan Schokker, Henri Woelders, Norbert Stockhofe-Zurwieden, Johanna M. J. Rebel, Hauke Smidt
Animal Microbiome.2021;[Epub] CrossRef - Effects of Iron and Zinc Biofortified Foods on Gut Microbiota In Vivo (Gallus gallus): A Systematic Review
Mariana Juste Contin Gomes, Hércia Stampini Duarte Martino, Elad Tako
Nutrients.2021; 13(1): 189. CrossRef - Characterization of a novel Pantoea symbiont allows inference of a pattern of convergent genome reduction in bacteria associated with Pentatomidae
Marzieh Kashkouli, Michele Castelli, Anna M. Floriano, Claudio Bandi, Sara Epis, Yaghoub Fathipour, Mohammad Mehrabadi, Davide Sassera
Environmental Microbiology.2021; 23(1): 36. CrossRef - Gut Microbiota-Derived Metabolite Signature in Suckling and Weaned Piglets
Martin Beaumont, Laurent Cauquil, Allan Bertide, Ingrid Ahn, Céline Barilly, Lisa Gil, Cécile Canlet, Olivier Zemb, Géraldine Pascal, Arnaud Samson, Sylvie Combes
Journal of Proteome Research.2021; 20(1): 982. CrossRef - Zinc Status Index (ZSI) for Quantification of Zinc Physiological Status
Jacquelyn Cheng, Haim Bar, Elad Tako
Nutrients.2021; 13(10): 3399. CrossRef - Time-course analysis of metabolomic and microbial responses in anaerobic digesters exposed to ammonia
Olivier Chapleur, Simon Poirier, Angéline Guenne, Kim-Anh Lê Cao
Chemosphere.2021; 283: 131309. CrossRef -
Ruminococcus bovis sp. nov., a novel species of amylolytic Ruminococcus isolated from the rumen of a dairy cow
James Gaffney, Jordan Embree, Sean Gilmore, Mallory Embree
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef - Fecal Microbiota Perspective for Evaluation of Prebiotic Potential of Bamboo Hemicellulose Hydrolysate in Mice: A Preliminary Study
Nao Ikeyama, Mitsuo Sakamoto, Moriya Ohkuma, Shigeru Hiramoto, Jianpeng Wang, Shigenobu Tone, Kiwamu Shiiba
Microorganisms.2021; 9(5): 888. CrossRef - Acceptive Immunity: The Role of Fucosylated Glycans in Human Host–Microbiome Interactions
Svetlana Kononova, Ekaterina Litvinova, Timur Vakhitov, Maria Skalinskaya, Stanislav Sitkin
International Journal of Molecular Sciences.2021; 22(8): 3854. CrossRef - ZiBuPiYin Recipe Prevented and Treated Cognitive Decline in ZDF Rats With Diabetes-Associated Cognitive Decline via Microbiota–Gut–Brain Axis Dialogue
Tingting Bi, Ruiqi Feng, Libin Zhan, Weiming Ren, Xiaoguang Lu
Frontiers in Cell and Developmental Biology.2021;[Epub] CrossRef - Antibiotic resistance, antimicrobial residues, and bacterial community diversity in pasture-raised poultry, swine, and beef cattle manures
Michael James Rothrock, Byeng Ryel Min, Lana Castleberry, Heidi Waldrip, David Parker, David Brauer, Dipti Pitta, Nagaraju Indugu
Journal of Animal Science.2021;[Epub] CrossRef - Succession Analysis of Gut Microbiota Structure of Participants from Long-Lived Families in Hechi, Guangxi, China
Minhong Ren, He Li, Zhen Fu, Quanyang Li
Microorganisms.2021; 9(12): 2524. CrossRef - Chemical Composition of Tomato Seed Flours, and Their Radical Scavenging, Anti-Inflammatory and Gut Microbiota Modulating Properties
Uyory Choe, Jianghao Sun, Elena Bailoni, Pei Chen, Yanfang Li, Boyan Gao, Thomas T. Y. Wang, Jiajia Rao, Liangli (Lucy) Yu
Molecules.2021; 26(5): 1478. CrossRef - Type IV pili are widespread among non‐pathogenic Gram‐positive gut bacteria with diverse carbohydrate utilization patterns
Vita Rozman, Tomaž Accetto, Sylvia H. Duncan, Harry J. Flint, Maša Vodovnik
Environmental Microbiology.2021; 23(3): 1527. CrossRef - Steam Explosion Pretreatment Changes Ruminal Fermentation in vitro of Corn Stover by Shifting Archaeal and Bacterial Community Structure
Kun Wang, Xuemei Nan, Jinjin Tong, Guangyong Zhao, Linshu Jiang, Benhai Xiong
Frontiers in Microbiology.2020;[Epub] CrossRef - Rumen Microbiome Composition Is Altered in Sheep Divergent in Feed Efficiency
Steven McLoughlin, Charles Spillane, Noel Claffey, Paul E. Smith, Tommy O’Rourke, Michael G. Diskin, Sinéad M. Waters
Frontiers in Microbiology.2020;[Epub] CrossRef - Gut Microbiome and Serum Metabolome Analyses Identify Unsaturated Fatty Acids and Butanoate Metabolism Induced by Gut Microbiota in Patients With Chronic Spontaneous Urticaria
Detong Wang, Shuping Guo, Hongxia He, Li Gong, Hongzhou Cui
Frontiers in Cellular and Infection Microbiology.2020;[Epub] CrossRef - SOD1 deficiency alters gastrointestinal microbiota and metabolites in mice
Haruka Sagi, Shuichi Shibuya, Tamotsu Kato, Yumiko Nakanishi, Arisa Tsuboi, Shigeharu Moriya, Hiroshi Ohno, Hirokuni Miyamoto, Hiroaki Kodama, Takahiko Shimizu
Experimental Gerontology.2020; 130: 110795. CrossRef - Multi-omics Approaches To Decipher the Impact of Diet and Host Physiology on the Mammalian Gut Microbiome
Christian Milani, Giulia Alessandri, Leonardo Mancabelli, Marta Mangifesta, Gabriele Andrea Lugli, Alice Viappiani, Giulia Longhi, Rosaria Anzalone, Sabrina Duranti, Francesca Turroni, Maria Cristina Ossiprandi, Douwe van Sinderen, Marco Ventura, Johanna
Applied and Environmental Microbiology.2020;[Epub] CrossRef - Developmental symbiosis facilitates the multiple origins of herbivory
Scott F. Gilbert
Evolution & Development.2020; 22(1-2): 154. CrossRef - Puffer Fish Gut Microbiota Studies Revealed Unique Bacterial Co-Occurrence Patterns and New Insights on Tetrodotoxin Producers
Zhenchi Li, Jinglin Tian, Yukun Lai, Chiu-Hong Lee, Zongwei Cai, Chun-Fai Yu
Marine Drugs.2020; 18(5): 278. CrossRef - Biodegradability of woody film produced by solvent volatilisation of Japanese Beech solution
Yuri Nishiwaki-Akine, Sui Kanazawa, Norihisa Matsuura, Ryoko Yamamoto-Ikemoto
Scientific Reports.2020;[Epub] CrossRef - The effect of a diet based on rice straw co-fermented with probiotics and enzymes versus a fresh corn Stover-based diet on the rumen bacterial community and metabolites of beef cattle
Yongqiang Hu, Yuyong He, Shan Gao, Zhiqiang Liao, Tao Lai, Haimei Zhou, Qianlin Chen, Lingyu Li, Haijun Gao, Wei Lu
Scientific Reports.2020;[Epub] CrossRef - Comparison of serum microbiome composition in bipolar and major depressive disorders
Sang Jin Rhee, Hyeyoung Kim, Yunna Lee, Hyun Jeong Lee, C. Hyung Keun Park, Jinho Yang, Yoon-Keun Kim, Sungmin Kym, Yong Min Ahn
Journal of Psychiatric Research.2020; 123: 31. CrossRef - Intestinal flora alterations in patients with early chronic kidney disease: a case-control study among the Han population in southwestern China
Qiongdan Hu, Kaiyan Wu, Wei Pan, Yan Zeng, Keqin Hu, Dingguo Chen, Xinchun Huang, Qiong Zhang
Journal of International Medical Research.2020;[Epub] CrossRef - Gut microbiota derived metabolites contribute to intestinal barrier maturation at the suckling-to-weaning transition
Martin Beaumont, Charlotte Paës, Eloïse Mussard, Christelle Knudsen, Laurent Cauquil, Patrick Aymard, Céline Barilly, Béatrice Gabinaud, Olivier Zemb, Sandra Fourre, Roselyne Gautier, Corinne Lencina, Hélène Eutamène, Vassilia Theodorou, Cécile Canlet, Sy
Gut Microbes.2020; 11(5): 1268. CrossRef - Towards a psychobiotic therapy for depression: Bifidobacterium breve CCFM1025 reverses chronic stress-induced depressive symptoms and gut microbial abnormalities in mice
Peijun Tian, Kenneth J. O'Riordan, Yuan-kun Lee, Gang Wang, Jianxin Zhao, Hao Zhang, John F. Cryan, Wei Chen
Neurobiology of Stress.2020; 12: 100216. CrossRef - Anti-Inflammatory Activity of a Peptide from Skipjack (Katsuwonus pelamis)
Zhi-gao Wang, Xiao-guo Ying, Peng Gao, Chun-li Wang, Yi-fan Wang, Xin-wei Yu, Jing Chen, Bin Wang, Hong-yu Luo
Marine Drugs.2019; 17(10): 582. CrossRef - Maternal Dietary Protein Intake Influences Milk and Offspring Gut Microbial Diversity in a Rat (Rattus norvegicus) Model
Matthew Warren, Haley Hallowell, Keah Higgins, Mark Liles, Wendy Hood
Nutrients.2019; 11(9): 2257. CrossRef - Response of Beef Cattle Fecal Microbiota to Grazing on Toxic Tall Fescue
Ryan S. Mote, Nicholas S. Hill, Joseph H. Skarlupka, Zachary B. Turner, Zachary P. Sanders, Dean P. Jones, Garret Suen, Nikolay M. Filipov, Charles M. Dozois
Applied and Environmental Microbiology.2019;[Epub] CrossRef - Ingestion of Bifidobacterium longum subspecies infantis strain CCFM687 regulated emotional behavior and the central BDNF pathway in chronic stress-induced depressive mice through reshaping the gut microbiota
Peijun Tian, Renying Zou, Linhong Song, Xu Zhang, Bin Jiang, Gang Wang, Yuan-kun Lee, Jianxin Zhao, Hao Zhang, Wei Chen
Food & Function.2019; 10(11): 7588. CrossRef - Synergistic effects of APOE and sex on the gut microbiome of young EFAD transgenic mice
Juan Maldonado Weng, Ishita Parikh, Ankur Naqib, Jason York, Stefan J. Green, Steven Estus, Mary Jo LaDu
Molecular Neurodegeneration.2019;[Epub] CrossRef - Comparative analysis of the gut microbiota in centenarians and young adults shows a common signature across genotypically non-related populations
Ngangyola Tuikhar, Santosh Keisam, Rajendra Kumar Labala, Imrat, Padma Ramakrishnan, Moirangthem Cha Arunkumar, Giasuddin Ahmed, Elena Biagi, Kumaraswamy Jeyaram
Mechanisms of Ageing and Development.2019; 179: 23. CrossRef - Gut microbiomes and their metabolites shape human and animal health
Woojun Park
Journal of Microbiology.2018; 56(3): 151. CrossRef
Journal Articles
- Introducing EzAAI: a pipeline for high throughput calculations of prokaryotic average amino acid identity
-
Dongwook Kim , Sein Park , Jongsik Chun
-
J. Microbiol. 2021;59(5):476-480. Published online April 28, 2021
-
DOI: https://doi.org/10.1007/s12275-021-1154-0
-
-
47
View
-
0
Download
-
214
Web of Science
-
211
Crossref
-
Abstract
-
The average amino acid identity (AAI) is an index of pairwise
genomic relatedness, and multiple studies have proposed its
application in prokaryotic taxonomy and related disciplines.
AAI demonstrates better resolution in elucidating taxonomic
structure beyond the species rank when compared with average
nucleotide identity (ANI), which is a standard criterion
in species delineation. However, an efficient and easy-to-use
computational tool for AAI calculation in large-scale taxonomic
studies is not yet available. Here, we introduce a bioinformatic
pipeline, named EzAAI, which allows for rapid
and accurate AAI calculation in prokaryote sequences. The
EzAAI tool is based on the MMSeqs2 program and computes
AAI values almost identical to those generated by the standard
BLAST algorithm with significant improvements in the
speed of these evaluations. Our pipeline also provides a function
for hierarchical clustering to create dendrograms, which
is an essential part of any taxonomic study. EzAAI is available
for download as a standalone JAVA program at http://
leb.snu.ac.kr/ezaai.
-
Citations
Citations to this article as recorded by

- Parasalinivibrio latis gen. nov., sp. nov., isolated from the distal gut of healthy farmed Asian Seabass (Lates calcarifer)
Shuan Er, Melissa Soh, Adrian Low, Henning Seedorf
Antonie van Leeuwenhoek.2025;[Epub] CrossRef - Acidisoma cladoniae sp. nov., an acidotolerant bacterium isolated from an Antarctic lichen
Un Cho, Jehyun Jeon, Woohyun Kim, Soon Gyu Hong, Hyoungseok Lee, Yung Mi Lee
Antonie van Leeuwenhoek.2025;[Epub] CrossRef - Phenylobacterium ferrooxidans sp. nov., isolated from a sub-surface geothermal aquifer in Iceland
Eva Pouder, Erwann Vince, Karen Jacquot, Maimouna batoma Traoré, Ashley Grosche, Maria Ludwig, Mohamed Jebbar, Loïs Maignien, Karine Alain, Sophie Mieszkin
Systematic and Applied Microbiology.2025; 48(1): 126578. CrossRef - Description of Hyphococcus formosus sp. nov. and Hyphococcus lacteus sp. nov., isolated from coastal sediment, and reclassification of Marinicaulis flavus as Hyphococcus luteus nom. nov. and Marinicaulis aureus as Hyphococcus aureus comb. nov
Yu-Qi Ye, Xin-Yue Zhang, Hong-Nan Gong, Meng-Qi Ye, Zong-Jun Du
Systematic and Applied Microbiology.2025; 48(1): 126575. CrossRef - Methyloraptor flagellatus gen. nov., sp. nov., novel Ancalomicrobiaceae-affiliated facultatively methylotrophic bacteria that feed on methanotrophs of the genus Methylococcus
Victoria A. Saltykova, Olga V. Danilova, Igor Y. Oshkin, Svetlana E. Belova, Natalia E. Suzina, Nikolai V. Pimenov, Svetlana N. Dedysh
Systematic and Applied Microbiology.2025; 48(1): 126565. CrossRef - Florfenicol-resistant Brevundimonas sanguinis sp. nov., a novel bacterium isolated from patient blood in South Korea
Ji Hee Lee, Yewon An, Su Yeon Kim
Antonie van Leeuwenhoek.2025;[Epub] CrossRef - Aquibaculum sediminis sp. nov., a halotolerant bacteria isolated from salt lake sediment
Qing-Yu Xu, Lei Gao, Dildar Wu, Xin-Yao Li, Yong-Hong Liu, Yao Zhang, Yue-Heng Chen, Ting-Ting She, Bao-Zhu Fang, Wen-Jun Li
Antonie van Leeuwenhoek.2025;[Epub] CrossRef - LINgroups as a Robust Principled Approach to Compare and Integrate Multiple Bacterial Taxonomies
Reza Mazloom, N. Tessa Pierce-Ward, Parul Sharma, Leighton Pritchard, C. Titus Brown, Boris A. Vinatzer, Lenwood S. Heath
IEEE/ACM Transactions on Computational Biology and Bioinformatics.2024; 21(6): 2304. CrossRef -
Microbulbifer spongiae sp. nov., isolated from marine sponge Diacarnus erythraeanus
Nabila Ishaq, Mimi Zhang, Luyao Gao, Micha Ilan, Zhiyong Li
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Genome‐based taxonomic analysis of the genus Pseudoalteromonas reveals heterotypic synonyms
Patrick Videau, Maximillian D. Shlafstein, David K. Oline, Scott A. Givan, Linda Fleet Chapman, Wendy K. Strangman, Richard L. Hahnke, Jimmy H. Saw, Blake Ushijima
Environmental Microbiology.2024;[Epub] CrossRef -
Arcicella gelida sp. nov. and Arcicella lustrica sp. nov., isolated from streams in China and re-examining the taxonomic status of all the genera within the families Spirosomataceae and Cytophagaceae
Huibin Lu, Li Chen, Linpei Huang
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Sustained bacterial N2O reduction at acidic pH
Guang He, Gao Chen, Yongchao Xie, Cynthia M. Swift, Diana Ramirez, Gyuhyon Cha, Konstantinos T. Konstantinidis, Mark Radosevich, Frank E. Löffler
Nature Communications.2024;[Epub] CrossRef -
Paenalcaligenes faecalis sp. nov., a novel species of the family Alcaligenaceae isolated from chicken faeces
Yiran Zhang, John Quensen, Bo Chen, Hailong Li, James Tiedje, Wei Sun, Xun Qian
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef -
Rhodoferax lithotrophicus sp. nov., a neutrophilic iron-oxidizing and -reducing bacterium isolated from iron-rich freshwater sediments
Shingo Kato, Takashi Itoh, Takao Iino, Mitsuo Sakamoto, Moriya Ohkuma
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef -
Paenibacillus suaedae sp. nov. and Paenibacillus violae sp. nov., isolated from the roots of Suaeda japonica Makino and Viola mandshurica W. Becker with plant growth-promoting potential
Inhyup Kim, Sunho Park, Yonghee Jung, Haejin Woo, Hyunji Lee, Subin Yook, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Genetic potential for aerobic respiration and denitrification in globally distributed respiratory endosymbionts
Daan R. Speth, Linus M. Zeller, Jon S. Graf, Will A. Overholt, Kirsten Küsel, Jana Milucka
Nature Communications.2024;[Epub] CrossRef -
Description of the first marine-isolated member of the under-represented phylum
Gemmatimonadota
, and the environmental distribution and ecogenomics of
Gaopeijiales
ord. nov.
Yu-Qi Ye, Meng-Qi Ye, Xin-Yue Zhang, You-Zhi Huang, Zi-Yang Zhou, Yan-Jun Feng, Zong-Jun Du, Thulani P. Makhalanyane
mSystems.2024;[Epub] CrossRef -
Ideonella margarita sp. nov., Ideonella lacteola sp. nov., Pseudaquabacterium inlustre sp. nov. and Pseudaquabacterium rugosum sp. nov., isolated from streams in China and re-examining the taxonomic status of all the genera within the family
Huibin Lu, Li Chen
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef -
Comparative genomics of obligate predatory bacteria belonging to phylum
Bdellovibrionota
highlights distribution and predicted functions of lineage-specific protein families
Sidney C. Davis, Joseph Cerra, Laura E. Williams, Barbara J. Campbell
mSphere.2024;[Epub] CrossRef - Isolation and characterization of cellulose-mineralizing haloalkaliphilic bacteria from Siberian soda lakes
Dimitry Y. Sorokin, Alexander Y. Merkel, Tatjana V. Khizhniak
Frontiers in Microbiology.2024;[Epub] CrossRef - The genome of a new Halorubrum distributum strain ICIS4 isolated from the culture of a microalga Dunaliella salina
Е. А. Selivanova, А. S. Balkin, Yu. А. Khlopko, V. Ya. Kataev, А. О. Plotnikov
Microbiology.2024; 93(4): 444. CrossRef -
Lacrimispora brassicae sp. nov. isolated from fermented cabbage, and proposal of Clostridium indicum Gundawar et al. 2019 and Clostridium methoxybenzovorans Mechichi et al. 1999 as heterotypic synonyms of Lacrimispora amygdalina (Parshina et
Hisami Kobayashi, Yasuhiro Tanizawa, Mitsuo Sakamoto, Moriya Ohkuma, Masanori Tohno
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef -
Clostridium lapidicellarium sp. nov. and Clostridium moutaii sp. nov., two species isolated from fermentation cellar-producing sauce-flavour Chinese baijiu
Fan Yang, Hui Wang, Liang-Qiang Chen, Nan Zhou, Jian-Jun Lu, Xiu-Xin Pu, Bo Wan, Li Wang, Shuang-Jiang Liu
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Ultraconserved bacteriophage genome sequence identified in 1300-year-old human palaeofaeces
Piotr Rozwalak, Jakub Barylski, Yasas Wijesekara, Bas E. Dutilh, Andrzej Zielezinski
Nature Communications.2024;[Epub] CrossRef - Description of Streptococcus dentalis sp. nov., Streptococcus gingivalis sp. nov., and Streptococcus lingualis sp. nov., Isolated from Human Oral Cavities
Beom-Jin Goo, Young-Sik Choi, Do-Hun Gim, Su-Won Jeong, Jee-Won Choi, Hojun Sung, Jae-Yun Lee, Jin-Woo Bae
Journal of Microbiology.2024; 62(11): 973. CrossRef - Hohaiivirga grylli gen. nov., sp. nov., a New Member of the Family Methylobacteriaceae, Isolated from Cricket (Gryllus chinensis)
Hong-Chuan Wang, Meng-Han Huang, Dan-Yuan Guo, Wei He, Lu Wang, Zi-Yue Fu, Wen-Jun Li, Ai Hua Zhang, Dao-Feng Zhang
Current Microbiology.2024;[Epub] CrossRef -
Cellulomonas alba sp. nov. and Cellulomonas edaphi sp. nov., isolated from wetland soils
Sunho Park, Inhyup Kim, Geeta Chhetri, Yonghee Jung, Haejin Woo, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Age, metabolisms, and potential origin of dominant anammox bacteria in the global oxygen-deficient zones
Rui Zhao, Irene H Zhang, Amal Jayakumar, Bess B Ward, Andrew R Babbin
ISME Communications.2024;[Epub] CrossRef - Limosilactobacillus allomucosae sp. nov., a novel species isolated from wild boar faecal samples as a potential probiotic for domestic pigs
Binbin Chen, Shaktheeshwari Silvaraju, Sharifah Nora Ahmad Almunawar, Yu Chyuan Heng, Jolie Kar Yi Lee, Sandra Kittelmann
Systematic and Applied Microbiology.2024; 47(6): 126556. CrossRef - Evaluation of sequence-based tools to gather more insight into the positioning of rhizogenic agrobacteria within the Agrobacterium tumefaciens species complex
Pablo Roberto Vargas Ribera, Nuri Kim, Marc Venbrux, Sergio Álvarez-Pérez, Hans Rediers, Muhammad Anwar
PLOS ONE.2024; 19(11): e0302954. CrossRef -
Chitiniphilus purpureus sp. nov., a novel chitin-degrading bacterium isolated from crawfish pond sediment
Kaiyang Li, Xiong Luo, Rongrong Fan, Zhuoran Ding, Shixue Zheng, Zhengjun Chen
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Thalassotalea aquiviva sp. nov., and Thalassotalea maritima sp. nov., Isolated from Seawater of the Coast in South Korea
Jina Lee, Seung-Hui Song, Kira Moon, Nakyeong Lee, Sangdon Ryu, Hye Seon Song, Sung Moon Lee, Yun Ji Kim, Se Won Chun, Kyung-Min Choi, Aslan Hwanhwi Lee
Journal of Microbiology.2024; 62(12): 1099. CrossRef - Cold adaptation and response genes of Antarctic Cryobacterium sp. SO2 from the Fildes Peninsula, King George Island
Chui Peng Teoh, Marcelo González‑Aravena, Paris Lavin, Clemente Michael Vui Ling Wong
Polar Biology.2024; 47(2): 135. CrossRef - Xiashengella succiniciproducens gen. nov., sp. nov., a succinate-producing bacterium isolated from an anaerobic digestion tank in the family Marinilabiliaceae of the order Bacteroidales
Hao-Jie Huang, Xi Zhang, Xin-Wei Sun, Biao Chen, Xiu-Tong Li, Nan Zhou, Rashidin Abdugheni, Qiu-Yin Cheng, Tie-Jun Zhang, Yao Liu, Yong Jiang, Ye Deng, Shuang-Jiang Liu, Cheng-Ying Jiang
Archives of Microbiology.2024;[Epub] CrossRef -
Paracoccus spongiarum sp. nov., isolated from the marine sponge, Phakellia elegans
Soo-Bin Kim, Kyung Hyun Kim, Jin-Sook Park
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef -
Sorlinia euscelidii gen. nov., sp. nov., a novel acetic acid bacterium isolated from the leafhopper Euscelidius variegatus (Hemiptera: Cicadellidae)
Ramona Marasco, Grégoire Michoud, Kholoud A. Seferji, Elena Gonella, Elisa Garuglieri, Eleonora Rolli, Alberto Alma, Francesca Mapelli, Sara Borin, Daniele Daffonchio, Elena Crotti
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Comparative genomics of the genus Halioglobus reveals the genetic basis for the reclassification of Halioglobus pacificus as Parahalioglobus pacificus gen. nov. comb. nov
Jake Adolf V. Montecillo
International Microbiology.2024; 27(6): 1831. CrossRef -
Neisseria leonii sp. nov., isolated from the nose, lung, and liver of rabbits
Martin Boutroux, Sandrine Favre-Rochex, Olivier Gorgette, Gérald Touak, Estelle Mühle, Christiane Bouchier, Olivier Chesneau, Frédéric J. Veyrier, Dominique Clermont, Praveen Rahi
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Pedobacter rhodius sp. nov. and Pedobacter punctiformis sp. nov., isolated from soil
Haejin Woo, Geeta Chhetri, Inhyup Kim, Yoonseop So, Sunho Park, Yonghee Jung, Taegun Seo
Antonie van Leeuwenhoek.2024;[Epub] CrossRef - Taxonomic characterization of Sphaerotilus microaerophilus sp. nov., a sheath-forming microaerophilic bacterium of activated sludge origin
Shiori Narihara, Shun Chida, Naoki Matsunaga, Ryosuke Akimoto, Mizuki Akimoto, Aoi Hagio, Tomomi Mori, Tadashi Nittami, Michio Sato, Sehui Mun, Hyeonjin Kang, Ji Hwan Back, Minoru Takeda
Archives of Microbiology.2024;[Epub] CrossRef - Streptomyces yaizuensis sp. nov., a berninamycin C-producing actinomycete isolated from sponge
Miku Takahashi, Kanata Hoshino, Moriyuki Hamada, Tomohiko Tamura, Ryota Moriuchi, Hideo Dohra, Youji Nakagawa, Susumu Kokubo, Motoyuki Yamazaki, Hiroyuki Nakagawa, Masayuki Hayakawa, Shinya Kodani, Hideki Yamamura
The Journal of Antibiotics.2024;[Epub] CrossRef - Advanced aspects of acetogens
Anja Poehlein, Benjamin Zeldes, Maximilian Flaiz, Tim Böer, Alina Lüschen, Franziska Höfele, Kira S. Baur, Bastian Molitor, Christian Kröly, Meng Wang, Quan Zhang, Yixuan Fan, Wei Chao, Rolf Daniel, Fuli Li, Mirko Basen, Volker Müller, Largus T. Angenent,
Bioresource Technology.2024; : 131913. CrossRef -
Sphingomonas rustica sp. nov. and Sphingomonas agrestis sp. nov., novel carotenoid-producing bacterial species isolated from farm soil
Hyunji Lee, Inhyup Kim, Sunho Park, Haejin Woo, Subin Yook, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Hidden genomic diversity drives niche partitioning in a cosmopolitan eukaryotic picophytoplankton
Yangbing Xu, Shara K K Leung, Taylor M W Li, Charmaine C M Yung
The ISME Journal.2024;[Epub] CrossRef -
Flagellimonas baculiformis sp. nov. and Flagellimonas crocea sp. nov., isolated from surface seawater of the Pacific Ocean
Ming-lei Wang, Ge-Yi Fu, Xue-Wei Xu
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Two Novel Bacterial Species, Rhodanobacter lycopersici sp. nov. and Rhodanobacter geophilus sp. nov., Isolated from the Rhizosphere of Solanum lycopersicum with Plant Growth-Promoting Traits
Haejin Woo, Inhyup Kim, Geeta Chhetri, Sunho Park, Hyunji Lee, Subin Yook, Taegun Seo
Microorganisms.2024; 12(11): 2227. CrossRef - Preliminary comparative genomics analysis among Corynebacterium kroppenstedtii complex necessitates a reassessment of precise species associated with mastitis
Ying Huang, Ming-Hui Song, Shun-Guang Li, Hong- Yu Shen, Ping-Hua Qu, Dao-Feng Zhang
Journal of Applied Microbiology.2024;[Epub] CrossRef - Salmonirosea aquatica gen. nov., sp. nov., a Novel Genus within the Family Spirosomaceae, Was Isolated from Brackish Water in the Republic of Korea
Kiwoon Baek, Sumin Jang, Jaeduk Goh, Ahyoung Choi
Microorganisms.2024; 12(8): 1671. CrossRef - Phylogenomic analyses of the genus Actinoplanes: description of four novel genera
Ivan Roman, Victor Fedorenko, Oleksandr Gromyko
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - A hotspot of diversity: novel Shewanella species isolated from Baltic Sea sediments delineate a sympatric species complex
Alberto J. Martín-Rodríguez, Víctor Fernández-Juárez, Valerie D. Valeriano, Indiwari Mihindukulasooriya, Livia Ceresnova, Enrique Joffré, Susanne Jensie-Markopoulos, Edward R. B. Moore, Åsa Sjöling
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - An evolutionary view of the Fusarium core genome
Daniel A. Gomez-Chavarria, Alvaro L. Rua-Giraldo, Juan F. Alzate
BMC Genomics.2024;[Epub] CrossRef - Complete genome sequence of a winter season Vibrio facilitates discovery of a novel subclade of cold-adapted species in the albus clade
Paul D. Kastner, Stephen E. Noell, David A. Essig
Microbial Genomics
.2024;[Epub] CrossRef - Advancements in prokaryotic systematics and the role of Bergey's International Society for Microbial Systematicsin addressing challenges in the meta-data era
Jian-Yu Jiao, Rashidin Abdugheni, Dao-Feng Zhang, Iftikhar Ahmed, Mukhtiar Ali, Maria Chuvochina, Svetlana N Dedysh, Xiuzhu Dong, Markus Göker, Brian P Hedlund, Philip Hugenholtz, Kamlesh Jangid, Shuang-Jiang Liu, Edward R B Moore, Manik Prabhu Narsing Ra
National Science Review.2024;[Epub] CrossRef -
Klebsiella Pneumoniae – Taxonomy, Occurrence, Identification, Virulence Factors and Pathogenicity
Dorota Ochońska, Monika Brzychczy-Włoch
Advancements of Microbiology.2024; 63(3): 157. CrossRef - Characterization of a Novel Species of Legionella Isolated from a Healthcare Facility: Legionella resiliens sp. nov
Sandra Cristino, Maria Rosaria Pascale, Federica Marino, Carlo Derelitto, Silvano Salaris, Massimiliano Orsini, Stefano Squarzoni, Antonella Grottola, Luna Girolamini
Pathogens.2024; 13(3): 250. CrossRef - Genome-based classification of Halobellus rubicundus sp. nov., a novel extremely halophilic archaeon isolated from a Korean solar saltern
Chi Young Hwang, Eui-Sang Cho, In-Tae Cha, Ki-Eun Lee, Eun-Young Lee, Myung-Ji Seo
Extremophiles.2024;[Epub] CrossRef - Reclassification of Aestuariicella albida as Pseudomaricurvus albidus comb. nov. and Aestuariicella hydrocarbonica as Pseudomaricurvus hydrocarbonicus comb. nov. Based on Comparative Genomics and Molecular Synapomorphies
Jake Adolf V. Montecillo, Merell P. Billacura, Maria Distressa G. Billacura
Current Microbiology.2024;[Epub] CrossRef - Schauerella fraxinea gen. nov., sp. nov., a bacterial species that colonises ash trees tolerant to dieback caused by Hymenoscyphus fraxineus
Undine Behrendt, Valentin Burghard, Sonja Wende, Kristina Ulrich, Jacqueline Wolf, Meina Neumann-Schaal, Andreas Ulrich
Systematic and Applied Microbiology.2024; 47(4): 126516. CrossRef -
Roseateles subflavus sp. nov. and Roseateles aquae sp. nov., isolated from artificial pond water and Roseateles violae sp. nov., isolated from a Viola mandshurica root
Haejin Woo, Geeta Chhetri, Inhyup Kim, Yoonseop So, Sunho Park, Yonghee Jung, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - New Drinking Water Genome Catalog Identifies a Globally Distributed Bacterial Genus Adapted to Disinfected Drinking Water Systems
Ashwin S Sudarshan, Zihan Dai, Marco Gabrielli, Solize Oosthuizen-Vosloo, Konstantinos T. Konstantinidis, Ameet J Pinto
Environmental Science & Technology.2024; 58(37): 16475. CrossRef - Phylogenomic evaluation of Mangrovimicrobium sediminis gen. nov. sp. nov., the first nitrogen fixing member of the family Halieaceae adapted to mangrove habitat and reclassification of Halioglobus pacificus to Pseudohaliglobus pacificus comb. nov.
Pravin Kumar, Ashish Verma, Pooja Yadav, Joyasree Das, Lalit Kumar, Srinivasan Krishnamurthi
Science of The Total Environment.2024; 933: 172995. CrossRef - Draft Genome Sequences of Three Janthinobacterium lividum Strains Producing Violacein
Yu Jeong Lee, Jae-Cheol Lee, Kira Moon, Aslan Hwanhwi Lee, Byung Hee Chun
Microbiology and Biotechnology Letters.2024; 52(2): 215. CrossRef -
Eubacterium album sp. nov., a butyrate-producing bacterium isolated from faeces of a healthy human
Feng-Lan Liu, Rashidin Abdugheni, Cong-Guo Ran, Nan Zhou, Shuang-Jiang Liu
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Description of Asgardarchaeum abyssi gen. nov. spec. nov., a novel species within the class Asgardarchaeia and phylum Asgardarchaeota in accordance with the SeqCode
Daniel Tamarit, Stephan Köstlbacher, Kathryn E. Appler, Kassiani Panagiotou, Valerie De Anda, Christian Rinke, Brett J. Baker, Thijs J.G. Ettema
Systematic and Applied Microbiology.2024; 47(4): 126525. CrossRef -
Alterisphingorhabdus coralli gen. nov. sp. nov., a novel aerobic anoxygenic phototrophic bacteria isolated from reef-building coral
Chang Yan, Kun Zhang, Songbiao Shi, Lili Jian, Beilin Chen, Syed Raziuddin Quadri, Xinpeng Tian
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Update on the proposed minimal standards for the use of genome data for the taxonomy of prokaryotes
Raúl Riesco, Martha E. Trujillo
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef -
Polymorphospora lycopeni sp. nov., a lycopene-producing actinomycetes isolated from lakeside soil sample of Baiyangdian
Jiashan Liu, Shilong Li, Xiaomin Duan, Hongmei Li, Xiumin Zhang
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Reclassification of Butyrivibrio crossotus Moore et al. 1976 (Approved Lists 1980) into a novel genus as Eshraghiella crossota gen. nov., comb. nov.
Mehdi Fatahi-Bafghi
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Analysis of the genetic diversity in RNA-directed RNA polymerase sequences: implications for an automated RNA virus classification system
Zhongshuai Tian, Tao Hu, Edward C Holmes, Jingkai Ji, Weifeng Shi
Virus Evolution.2024;[Epub] CrossRef - Fodinisporobacter ferrooxydans gen. nov., sp. nov.—A Spore-Forming Ferrous-Oxidizing Bacterium Isolated from a Polymetallic Mine
Zhen Jiang, Xiutong Li, Zonglin Liang, Zebao Tan, Nan Zhou, Ying Liu, Zhenghua Liu, Huaqun Yin, Kun Luo, Supawadee Ingsriswang, Shuangjiang Liu, Chengying Jiang
Microorganisms.2024; 12(5): 853. CrossRef - An abundant bacterial phylum with nitrite-oxidizing potential in oligotrophic marine sediments
Rui Zhao, Steffen L. Jørgensen, Andrew R. Babbin
Communications Biology.2024;[Epub] CrossRef - Genomic and phenotypic characterization of 26 novel marine bacterial strains with relevant biogeochemical roles and widespread presence across the global ocean
Xavier Rey-Velasco, Teresa Lucena, Ana Belda, Josep M. Gasol, Olga Sánchez, David R. Arahal, María J. Pujalte
Frontiers in Microbiology.2024;[Epub] CrossRef - Ignisphaera cupida sp. nov., a hyperthermophilic hydrolytic archaeon from a hot spring of Uzon (Kamchatka), and emended description of the genus Ignisphaera
Olga A. Podosokorskaya, Alexander G. Elcheninov, Alexandra A. Klyukina, Alexander Y. Merkel
Systematic and Applied Microbiology.2024; 47(5): 126541. CrossRef - Genomic diversity in Paenibacillus polymyxa: unveiling distinct species groups and functional variability
Adrian Wallner, Livio Antonielli, Ouiza Mesguida, Patrice Rey, Stéphane Compant
BMC Genomics.2024;[Epub] CrossRef - Taxonomic and genomic characterization of a siderophore-producing bacterium, Rhodoligotrophos ferricapiens sp. nov isolated from lettuce cultivation soil
Yu-Jin Kim, Yong-Seok Kim, Chang-Jun Cha
Antonie van Leeuwenhoek.2024;[Epub] CrossRef - Comparative genomic analyses of Cutibacterium granulosum provide insights into genomic diversity
Peishan Chen, Shaojing Wang, Hongyan Li, Xiaoye Qi, Yuanyuan Hou, Ting Ma
Frontiers in Microbiology.2024;[Epub] CrossRef - A new insight on the xyl upper operon revealed through genomic investigation strategy
Xuefeng Tian, Shaojing Wang, Peishan Chen, Mingbo Yang, Zhaoying Su, Yue Ming, Guoqiang Li, Ting Ma
International Biodeterioration & Biodegradation.2024; 189: 105748. CrossRef - Genome-based reclassification of Spiroplasma atrichopogonis Koerber et al. 2005 as a later heterotypic synonym of Spiroplasma mirum Tully et al. 1982
Vatsal Bhargava, Darshana Lahon, Sonal Gupta, Jasvinder Kaur, Pushp Lata
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Lysinibacillus piscis sp. nov. isolated from the gut of mottled spinefoot Siganus fuscescens
Hiyu Kanbe, Yuki Sano, Kazumori Mise, Shusei Kanie, Natsumi Ushijima, Keisuke Kawano, Minoru Kihara, Hideomi Itoh
Archives of Microbiology.2024;[Epub] CrossRef - Specific amino acid changes correlate with pathogenic flavobacteria
Vincent Gélinas, Valérie E. Paquet, Maude F. Paquet, Steve J. Charette, Antony T. Vincent
Genome.2024; 67(10): 368. CrossRef -
Aurantiacibacter flavus sp. nov. and Aurantiacibacter gilvus sp. nov., isolated from the mudflat of Suaeda japonica colonies
Sunho Park, Inhyup Kim, Haejin Woo, Hyunji Lee, Subin Yook, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef -
Splendidivirga corallicola gen. nov., sp. nov. and Agaribacillus aureus gen. nov., sp. nov., two bacteria isolated from coral Porites lutea, and proposal of Splendidivirgaceae fam. nov.
Jin Li, Jixin Luo, Mi Li, Chenyan Wang, Siyu Hu, Kun Lu, Guanghua Wang
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - The Genome of a New Halorubrum distributum Strain ICIS4 Isolated from the Culture of a Microalga Dunaliella salina
E. A. Selivanova, A. S. Balkin, Yu. A. Khlopko, V. Ya. Kataev, A. O. Plotnikov
Microbiology.2024; 93(4): 482. CrossRef - Peteryoungia algae sp. nov. isolated from seaweeds of Gouqi Island, China, and its unique genetic features among Peteryoungia strains
Jun Yin, Min He, Xiao-Xiao Liu, Chang-Bin Ren, Hou-Hong Liu, Hai Luo, Gen Chen, Ze-Fei Wang, Sanjit Chandra Debnath, Pin-Mei Wang, Hai-Xin Chen, Dao-Qiong Zheng
Antonie van Leeuwenhoek.2024;[Epub] CrossRef -
Methylomonas rivi sp. nov., Methylomonas rosea sp. nov., Methylomonas aurea sp. nov. and Methylomonas subterranea sp. nov., type I methane-oxidizing bacteria isolated from a freshwater creek and the deep terrestrial subsurface
Christopher A. Abin, Christopher T. Garner, Krithivasan Sankaranarayanan, Reid A. Sindelar, Kyrah F. Kotary, Rosa M. Garner, Samantha C. Barclay, Haiyuan Cai, Paul A. Lawson, Lee R. Krumholz
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Phylogenomic discernments into Anaerolineaceae thermal adaptations and the proposal of a candidate genus Mesolinea
Katherine Bedoya-Urrego, Juan F. Alzate
Frontiers in Microbiology.2024;[Epub] CrossRef - Unraveling the genomic secrets of Tritonibacter mobilis AK171: a plant growth-promoting bacterium isolated from Avicennia marina
Amal Khalaf Alghamdi, Sabiha Parween, Heribert Hirt, Maged M. Saad
BMC Genomics.2024;[Epub] CrossRef - Ochrobactrum chromiisoli sp. nov., Isolated from Chromium-Contaminated Soil
Yi Yang, Zhe Xu, Li Yang, Meng-yao Hu, Guang-yang Jiang, Jia Chen, Yi-chen Yang, Yongqiang Tian
Current Microbiology.2024;[Epub] CrossRef -
Spartinivicinus poritis sp. nov., a red pigment-producing bacterium isolated from a scleractinian coral Porites lutea
Sumbal Sajid, Guoqiang Zhang, Zongyao Zhang, Yishan Lu, Lianguo Chen, Lin Cai
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef -
Tardiphaga alba sp. nov., a heavy-metal-tolerant bacterium isolated from garden soil
Zhihua Bao, Chaojun Wang, Jiahui Cao, Tingting Zhang, Yong Guo, Yoshinori Sato, Tomoyasu Nishizawa, Hiroyuki Ohta
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Novel order-level lineage of ammonia-oxidizing archaea widespread in marine and terrestrial environments
Yue Zheng, Baozhan Wang, Ping Gao, Yiyan Yang, Bu Xu, Xiaoquan Su, Daliang Ning, Qing Tao, Qian Li, Feng Zhao, Dazhi Wang, Yao Zhang, Meng Li, Mari-K H Winkler, Anitra E Ingalls, Jizhong Zhou, Chuanlun Zhang, David A Stahl, Jiandong Jiang, Willm Martens-H
The ISME Journal.2024;[Epub] CrossRef - Refining the taxonomy of the order Hyphomicrobiales (Rhizobiales) based on whole genome comparisons of over 130 type strains
George C. diCenzo, Yuqi Yang, J. Peter W. Young, Nemanja Kuzmanović
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef -
Luteimonas flava sp. nov. and Aquilutibacter rugosus gen. nov., sp. nov., isolated from freshwater environments in China and re-examining the taxonomic status of genera Luteimonas and Lysobacter
Huibin Lu, Li Chen, Yujing Wang, Peng Xing, Qinglong Wu
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Novel taxonomic and functional diversity of eight bacteria from the upper digestive tract of chicken
Bibiana Rios-Galicia, Johan S. Sáenz, Timur Yergaliyev, Christoph Roth, Amélia Camarinha-Silva, Jana Seifert
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Parendozoicomonas callyspongiae sp. nov. Isolated from a Marine Sponge, Callyspongia elongate, and Reclassification of Sansalvadorimonas verongulae as Parendozoicomonas verongulae comb. nov.
Soo-Bin Kim, Kyung Hyun Kim, Jin-Sook Park
Current Microbiology.2024;[Epub] CrossRef -
Novel phage infecting the
Roseobacter
CHUG lineage reveals a diverse and globally distributed phage family
Zuqing Wu, Luyuan Guo, Ying Wu, Mingyu Yang, Sen Du, Jiabing Shao, Zefeng Zhang, Yanlin Zhao, Michael J. Imperiale
mSphere.2024;[Epub] CrossRef - Biochip-Based Identification of Mycobacterial Species in Russia
Danila Zimenkov, Vyacheslav Zhuravlev, Anastasia Ushtanit, Marina Filippova, Uliana Semenova, Natalia Solovieva, Maria Sviridenko, Anastasia Khakhalina, Svetlana Safonova, Marina Makarova, Elizaveta Gordeeva, Elena Guselnikova, Yakov Schwartz, Natalia Sta
International Journal of Molecular Sciences.2024; 25(23): 13200. CrossRef -
Leptothrix ochracea
genomes reveal potential for mixotrophic growth on Fe(II) and organic carbon
Gracee K. Tothero, Rene L. Hoover, Ibrahim F. Farag, Daniel I. Kaplan, Pamela Weisenhorn, David Emerson, Clara S. Chan, Arpita Bose
Applied and Environmental Microbiology.2024;[Epub] CrossRef -
Svornostia abyssi gen. nov., sp. nov. isolated from the world’s deepest silver–uranium mine currently devoted to the extraction of radon-saturated water
Gabriela Kapinusova, Jachym Suman, Michal Strejcek, Petr Pajer, Tomas Cajthaml, Pavel Ulbrich, Meina Neumann-Schaal, Ondrej Uhlik
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Genomic analysis of the class Phycisphaerae reveals a versatile group of complex carbon-degrading bacteria
Wouter B. Lenferink, Theo A. van Alen, Mike S. M. Jetten, Huub J. M. Op den Camp, Maartje A. H. J. van Kessel, Sebastian Lücker
Antonie van Leeuwenhoek.2024;[Epub] CrossRef - Genome streamlining in Parcubacteria transitioning from soil to groundwater
Narendrakumar M. Chaudhari, Olga M. Pérez-Carrascal, Will A. Overholt, Kai U. Totsche, Kirsten Küsel
Environmental Microbiome.2024;[Epub] CrossRef - Sulfurospirillum diekertiae sp. nov., a tetrachloroethene-respiring bacterium isolated from contaminated soil
Huijuan Jin, Leitao Huo, Yi Yang, Yan Lv, Jingjing Wang, Julien Maillard, Christof Holliger, Frank E. Löffler, Jun Yan
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Description of Pseudocalidococcus azoricus gen. sp. nov. (Thermosynechococcaceae, Cyanobacteria), a Rare but Widely Distributed Coccoid Cyanobacteria
Rúben Luz, Rita Cordeiro, Jan Kaštovský, Amélia Fonseca, Ralph Urbatzka, Vitor Vasconcelos, Vítor Gonçalves
Diversity.2023; 15(12): 1157. CrossRef - The identification of the new species Nitratireductor thuwali sp. nov. reveals the untapped diversity of hydrocarbon-degrading culturable bacteria from the arid mangrove sediments of the Red Sea
Ramona Marasco, Grégoire Michoud, Fatmah O. Sefrji, Marco Fusi, Chakkiath P. Antony, Kholoud A. Seferji, Alan Barozzi, Giuseppe Merlino, Daniele Daffonchio
Frontiers in Microbiology.2023;[Epub] CrossRef -
Danxiaibacter flavus gen. nov., sp. nov., a novel bacterium of the family Chitinophagaceae isolated from forest soil on Danxia Mountain
Zhuo-Huan Zheng, Chun-Yan Lu, Wen-Hui Lian, Jia-Rui Han, Fang Chen, Ting Zhou, Shuai Li, Lei Dong, Wen-Jun Li
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Metabolic profiling of petroleum-degrading microbial communities incubated under high-pressure conditions
Jinbo Xu, Lu Wang, Weifeng Lv, Xinmin Song, Yong Nie, Xiao-Lei Wu
Frontiers in Microbiology.2023;[Epub] CrossRef - Comparative Genomics Reveal the High Conservation and Scarce Distribution of Nitrogen Fixation nif Genes in the Plant-Associated Genus Herbaspirillum
Ana Marina Pedrolo, Filipe Pereira Matteoli, Cláudio Roberto Fônseca Sousa Soares, Ana Carolina Maisonnave Arisi
Microbial Ecology.2023; 86(1): 563. CrossRef - UACG: Up-to-Date Archaeal Core Genes and Software for Phylogenomic Tree Reconstruction
Seong-In Na, Michael James Bailey, Mauricio Chalita, Jae Hyoung Cho, Jongsik Chun
Journal of Microbiology.2023; 61(7): 683. CrossRef -
Alkalicoccobacillus porphyridii sp. nov., isolated from a marine red alga, reclassification of Shouchella plakortidis and Shouchella gibsonii as Alkalicoccobacillus plakortidis comb. nov. and Alkalicoccobacillus gibsonii comb. nov., and emend
Kyung Hyun Kim, Dong Min Han, Jae Kyeong Lee, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Phocaeicola oris sp. nov., an anaerobic bacterium isolated from the saliva of a patient with oral squamous cell carcinoma
Jiung-Wen Chen, Chao-Jen Shih, Li-Wha Wu, Yen-Chi Wu, Wei-Fan Chiang, Yuh-Ling Chen, Jer-Horng Wu
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Methylacidiphilum caldifontis gen. nov., sp. nov., a thermoacidophilic methane-oxidizing bacterium from an acidic geothermal environment, and descriptions of the family Methylacidiphilaceae fam. nov. and order Methylacidiphilales ord. nov.
Samuel Imisi Awala, Joo-Han Gwak, Yongman Kim, Chanmee Seo, Andrea Strazzulli, Song-Gun Kim, Sung-Keun Rhee
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Genome-based classification of the class Halobacteria and description of Haladaptataceae fam. nov. and Halorubellaceae fam. nov
Can Cui, Dong Han, Jing Hou, Heng-Lin Cui
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Complete genome sequence analysis of plant growth-promoting bacterium, Isoptericola sp. AK164 isolated from the rhizosphere of Avicennia marina growing at the Red Sea coast
Amal Khalaf Alghamdi, Sabiha Parween, Heribert Hirt, Maged M. Saad
Archives of Microbiology.2023;[Epub] CrossRef - Draft genome sequence of Hahella sp. CR1 and its ability in producing cellulases for saccharifying agricultural biomass
Melvin Chun Yun Tan, Muhammad Ramziuddin Zakaria, Kok Jun Liew, Chun Shiong Chong
Archives of Microbiology.2023;[Epub] CrossRef - Sedimenticola hydrogenitrophicus sp. nov. a chemolithoautotrophic bacterium isolated from a terrestrial mud volcano, and proposal of Sedimenticolaceae fam. nov. in the order Chromatiales
Galina Slobodkina, Alexander Merkel, Nataliya Ratnikova, Alexandra Kuchierskaya, Alexander Slobodkin
Systematic and Applied Microbiology.2023; 46(5): 126451. CrossRef - Comparative genomic assessment of members of genus Tenacibaculum: an exploratory study
Rohit Satyam, Shaban Ahmad, Khalid Raza
Molecular Genetics and Genomics.2023; 298(5): 979. CrossRef - Cave Thiovulum (Candidatus Thiovulum stygium) differs metabolically and genomically from marine species
Mina Bizic, Traian Brad, Danny Ionescu, Lucian Barbu-Tudoran, Luca Zoccarato, Joost W Aerts, Paul-Emile Contarini, Olivier Gros, Jean-Marie Volland, Radu Popa, Jessica Ody, Daniel Vellone, Jean-François Flot, Scott Tighe, Serban M Sarbu
The ISME Journal.2023; 17(3): 340. CrossRef -
Solicola gregarius gen. nov., sp. nov., a soil actinobacterium isolated after enhanced cultivation with Micrococcus luteus culture supernatant
Marco A. Lopez Marin, Jachym Suman, Kunal Jani, Pavel Ulbrich, Tomas Cajthaml, Alena Filipova, Petr Pajer, Meina Neumann-Schaal, Michal Strejcek, Ondrej Uhlik
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Microbial Niche Differentiation during Nitrite-Dependent Anaerobic Methane Oxidation
Wen-Bo Nie, Guo-Jun Xie, Xin Tan, Jie Ding, Yang Lu, Yi Chen, Chun Yang, Qiang He, Bing-Feng Liu, Defeng Xing, Nanqi Ren
Environmental Science & Technology.2023; 57(17): 7029. CrossRef -
Allocoprobacillus halotolerans gen. nov., sp. nov and Coprobacter tertius sp. nov., isolated from human gut microbiota
Nancy M. Y. Teng, Raymond Kiu, Rhiannon Evans, David J. Baker, Christian Zenner, Stephen D. Robinson, Lindsay J. Hall
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Aridibaculum aurantiacum gen. nov., sp. nov., isolated from the Kumtag Desert soil
Lei Dong, Shuai Li, Guo-Yuan Shi, Jia-Rui Han, Chun-Yan Lu, Wen-Hui Lian, Ling-Xiang Yue, Dalal Hussien M. Alkhalifah, Wael N. Hozzein, Wen-Jun Li
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Acidaminococcus homini s sp. nov., Amedibacillus hominis sp. nov., Lientehia hominis gen. nov. sp. nov., Merdimmobilis hominis gen. nov. sp. nov., and Paraeggerthella hominis sp. nov., isolated from human faeces
Rashidin Abdugheni, Dan-Hua Li, Yu-Jing Wang, Meng-Xuan Du, Nan Zhou, Chang Liu, Shuang-Jiang Liu
International Journal of Systematic and Evolutionary Microbiology.2023;[Epub] CrossRef -
Vogesella aquatica sp. nov. and Vogesella margarita sp. nov., isolated from rivers in Southwest China
Huibin Lu, Li Chen, Lingyang Kong, Linpei Huang, Guangjie Chen
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Dermatobacter hominis gen. nov., sp. nov., a new member of the family Iamiaceae, revealed the potential utilisation of skin-derived metabolites
HyungWoo Jo, Chaeyun Baek, Young Mok Heo, Hye-Been Kim, Haeun Lee, Seunghyun Kang, Seyoung Mun, Yunseok Oh, Doyeong Ko, Kyudong Han, Raúl Riesco, Martha E. Trujillo, Dong-Geol Lee
Antonie van Leeuwenhoek.2023; 116(11): 1139. CrossRef - Dynamic Development of Viral and Bacterial Diversity during Grass Silage Preservation
Johan S. Sáenz, Bibiana Rios-Galicia, Bianca Rehkugler, Jana Seifert
Viruses.2023; 15(4): 951. CrossRef -
Alteromonas gilva sp. nov. and Erythrobacter fulvus sp. nov., isolated from a tidal mudflat
Sunho Park, Inhyup Kim, Geeta Chhetri, Yoonseop So, Yonghee Jung, Haejin Woo, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Two novel alkalitolerant species Pseudalkalibacillus spartinae sp. nov. and Pseudalkalibacillus sedimenti sp. nov.
Guo-Hong Liu, Shuang Han, Bing Li, Rui-Li Li, Huai Shi, Qian-Qian Chen, Hend A. Alwathnani, Christopher Rensing, Shun-Gui Zhou
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Description of Brachybacterium sillae sp. nov., a thermophilic bacterium isolated from a hot spring
Dariimaa Ganbat, DoKyung Oh, Yong-Jik Lee, Dong-Woo Lee, Seong-Bo Kim, Won-Jae Chi, Ki-Eun Lee, Byoung-Hee Lee, You-Jung Jung, Jung-Sook Lee, Sang-Jae Lee
Antonie van Leeuwenhoek.2023; 116(8): 791. CrossRef -
Bacillus mexicanus sp. nov., a biological control bacterium isolated from the common bean (Phaseolus vulgaris L.) crop in Sinaloa, Mexico
Sergio de los Santos Villalobos, Carmen María Félix Pablos, Valeria Valenzuela Ruiz, Fannie I. Parra Cota
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Genome-centric metagenomic insights into the role of Chloroflexi in anammox, activated sludge and methanogenic reactors
Patricia Bovio-Winkler, Leandro D. Guerrero, Leonardo Erijman, Pía Oyarzúa, María Eugenia Suárez-Ojeda, Angela Cabezas, Claudia Etchebehere
BMC Microbiology.2023;[Epub] CrossRef - Potential for homoacetogenesis via the Wood–Ljungdahl pathway in Korarchaeia lineages from marine hydrothermal vents
Francesca Vulcano, Petra Hribovšek, Emily Olesin Denny, Ida H. Steen, Runar Stokke
Environmental Microbiology Reports.2023; 15(6): 698. CrossRef - Isolation and characterisation of novel Methanocorpusculum species indicates the genus is ancestrally host-associated
James G. Volmer, Rochelle M. Soo, Paul N. Evans, Emily C. Hoedt, Ana L. Astorga Alsina, Benjamin J. Woodcroft, Gene W. Tyson, Philip Hugenholtz, Mark Morrison
BMC Biology.2023;[Epub] CrossRef -
Thermomonas mangrovi sp. nov., isolated from soil of a mangrove nature reserve
Shanshan Xu, Junpeng Chen, Si Chen, Qiliang Lai, Zengzhi Liu, Ying Xu
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Proposal to transfer Bacillus massiliigorillae to the genus Peribacillus as Peribacillus massiliigorillae comb. nov., and Bacillus sinesaloumensis to the genus Ferdinandcohnia as Ferdinandcohnia sinesaloumensis comb. nov
Awalagaway Dhulappa, Manik Prabhu Narsing Rao, Haijie Wang, Bhagwan Narayan Rekadwad, Ying-Qian Kang
Archives of Microbiology.2023;[Epub] CrossRef - Characterization and Antioxidant Activity of Exopolysaccharides Produced by Lysobacter soyae sp. nov Isolated from the Root of Glycine max L.
Inhyup Kim, Geeta Chhetri, Yoonseop So, Sunho Park, Yonghee Jung, Haejin Woo, Taegun Seo
Microorganisms.2023; 11(8): 1900. CrossRef - Leucobacter edaphi sp. nov., a highly chromate-tolerant bacterium isolated from chromium containing chemical plant soil
Bijun Zheng, Zhe Xu, Li Yang, Guangyang Jiang, Jia Chen, Yichen Yang, Yongqiang Tian
Antonie van Leeuwenhoek.2023; 116(12): 1433. CrossRef -
Roseateles albus sp. nov., Roseateles koreensis sp. nov. and Janthinobacterium fluminis sp. nov., isolated from freshwater at Jucheon River, and emended description of Roseateles aquaticus comb. nov.
Sunho Park, Inhyup Kim, Geeta Chhetri, Yoonseop So, Yonghee Jung, Haejin Woo, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Isolation and Genomic Analysis of 3-Chlorobenzoate-Degrading Bacteria from Soil
Ifat Ara, Ryota Moriuchi, Hideo Dohra, Kazuhide Kimbara, Naoto Ogawa, Masaki Shintani
Microorganisms.2023; 11(7): 1684. CrossRef - Brytella acorum gen. nov., sp. nov., a novel acetic acid bacterium from sour beverages
Atena Sadat Sombolestani, Dries Bongaerts, Eliza Depoorter, Ilse Cleenwerck, Anneleen D. Wieme, Scott J. Britton, Stefan Weckx, Luc De Vuyst, Peter Vandamme
Systematic and Applied Microbiology.2023; 46(5): 126440. CrossRef - Complete genome sequence of Vibrio gazogenes PB1: an estuarine bacterium capable of producing prodigiosin from starch or cellulose
Bincy Baby, Dhanya Vijay, Pretty S. Philip, Afra A. Alnuaimi, Hessa M. Almansoori, Sarah O. Areidat, Gulfaraz Khan, Ranjit Vijayan, M. Kalim Akhtar
Frontiers in Marine Science.2023;[Epub] CrossRef -
Tianweitania aestuarii sp. nov., isolated from a coastal dune, reclassification of Corticibacterium populi as Tianweitania populi comb. nov., and emended description of the genus Tianweitania
Ji Hyeon Song, Sooyeon Park, Jung-Sook Lee, Wonyong Kim, Jung-Hoon Yoon
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Fluviispira vulneris sp. nov., isolated from human wound secretions
Peijuan Tang, Na Peng, Pengwen Ouyang, Sheng Long, Zhenhua Wei, Xingchun Chen, Pinghua Qu, Liangyi Xie
Antonie van Leeuwenhoek.2023; 116(12): 1305. CrossRef -
Neorhizobium turbinariae sp. nov., a coral-beneficial bacterium isolated from Turbinaria peltata
Hao Sun, Zhiyuan Miao, Shuai Liu, Xuerui Liu, Bogui Chen, Baolin Liao, Baohua Xiao
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Description of Salinimicrobium tongyeongense sp. nov., isolated from seawater
Dariimaa Ganbat, Dong-Woo Lee, Seong-Bo Kim, Yong-Jik Lee, Gaewon Nam, Won-Jae Chi, Byoung-Hee Lee, You-Jung Jung, Jung-Sook Lee, Sang-Jae Lee
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Genomic analysis and characterization of phages infecting the marine Roseobacter CHAB-I-5 lineage reveal a globally distributed and abundant phage genus
Zefeng Zhang, Zuqing Wu, He Liu, Mingyu Yang, Rui Wang, Yanlin Zhao, Feng Chen
Frontiers in Microbiology.2023;[Epub] CrossRef - PhaGAA: an integrated web server platform for phage genome annotation and analysis
Jiawei Wu, Qingrui Liu, Min Li, Jiliang Xu, Chen Wang, Junyin Zhang, Minfeng Xiao, Yannan Bin, Junfeng Xia, Can Alkan
Bioinformatics.2023;[Epub] CrossRef - Comparative Genomics Reveals Three Genetic Groups of the Whitefly Obligate Endosymbiont Candidatus Portiera aleyrodidarum
Teng Lei, Ning Luo, Chao Song, Junwei Yu, Yuhang Zhou, Xin Qi, Yinquan Liu
Insects.2023; 14(11): 888. CrossRef -
Roseobacter insulae sp. nov. and Loktanella gaetbuli sp. nov., isolated from tidal flats in the Yellow Sea in Korea
Eun Bee Lee, Sooyeon Park, Wonyong Kim, Jung-Hoon Yoon
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Novosphingobium mangrovi sp. nov., isolated from mangrove sediment
Qian Huang, Zhihui Qian, Tao Peng, Jin Li, Xueying Ye, Tongwang Huang, Zhong Hu
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Phylotaxonomic assessment based on four core gene sets and proposal of a genus definition among the families Paracoccaceae and Roseobacteraceae
Dao-Feng Zhang, Wei He, Zongze Shao, Iftikhar Ahmed, Yuqin Zhang, Wen-Jun Li, Zhe Zhao
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Scleromatobacter humisilvae gen. nov., sp. nov., a novel bacterium isolated from oak forest soil
Sophie Mieszkin, Blandine Trouche, Julien Ancousture, Youssef Raouf, Stéphane Uroz, Karine Alain
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Comammox
Nitrospira
and Ammonia-Oxidizing Archaea Are Dominant Ammonia Oxidizers in Sediments of an Acid Mine Lake Containing High Ammonium Concentrations
Deyong Li, Zhichang Ren, Yangqi Zhou, Lugao Jiang, Min Zheng, Guoqiang Liu, Jennifer B. Glass
Applied and Environmental Microbiology.2023;[Epub] CrossRef - Citrobacter sp. Y3 harbouring novel gene HBCD-hd-1 mineralizes hexabromocyclododecane via new metabolic pathways according to multi-omics characterization
Xingxing Peng, Tianyu Li, Qihang Zheng, Yingyuan Lu, Yuzhe He, Yetao Tang, Rongliang Qiu
Journal of Hazardous Materials.2023; 442: 130071. CrossRef -
Opacimonas viscosa gen. nov., sp. nov., a novel bacterium isolated from phycosphere
Xuanru Lin, Runlin Cai, Guanjing Cai, Jianmin Xie, Zhenyuan Zhou, Hui Wang
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Description of Microbacterium neungamense sp. nov. isolated from a hot spring
Dariimaa Ganbat, Ga Eul Jeong, DoKyung Oh, Dong-Woo Lee, Yong-Jik Lee, Seong-Bo Kim, In-Tae Cha, Won-Jae Chi, Seul-Ki Park, Jung-Sook Lee, Sang-Jae Lee
Archives of Microbiology.2023;[Epub] CrossRef - Habitat distribution of the genus Belliella in continental waters and the description of Belliella alkalica sp. nov., Belliella calami sp. nov. and Belliella filtrata sp. nov.
Kristóf Korponai, Sára Szuróczki, Zsuzsanna Márton, Attila Szabó, Paula V. Morais, Diogo Neves Proença, Erika Tóth, Emil Boros, Károly Márialigeti, Tamás Felföldi
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Molecular Characterization of Indigenous Rhizobia from Kenyan Soils Nodulating with Common Beans
Clabe Wekesa, Kelvin Kiprotich, Patrick Okoth, George O. Asudi, John O. Muoma, Alexandra C. U. Furch, Ralf Oelmüller
International Journal of Molecular Sciences.2023; 24(11): 9509. CrossRef - Putative novel hydrogen- and iron-oxidizing sheath-producing Zetaproteobacteria thrive at the Fåvne deep-sea hydrothermal vent field
Petra Hribovšek, Emily Olesin Denny, Håkon Dahle, Achim Mall, Thomas Øfstegaard Viflot, Chanakan Boonnawa, Eoghan P. Reeves, Ida Helene Steen, Runar Stokke, Michael S. Rappe
mSystems.2023;[Epub] CrossRef - Thiovibrio frasassiensis gen. nov., sp. nov., an autotrophic, elemental sulphur disproportionating bacterium isolated from sulphidic karst sediment, and proposal of Thiovibrionaceae fam. nov.
Heidi S. Aronson, Cais Thomas, Maia K. Bhattacharyya, Shaan R. Eckstein, Sophia R. Jensen, Roman A. Barco, Jennifer L. Macalady, Jan P. Amend
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Hufsiella ginkgonis gen. nov., sp. nov. and Hufsiella arboris sp. nov., isolated from tree barks
Heeyoung Kang, Seokhyeon Bae, Haneul Kim, Kiseong Joh
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Phenotypic and genomic characterization of the first alkaliphilic aceticlastic methanogens and proposal of a novel genus Methanocrinis gen.nov. within the family Methanotrichaceae
Maria A. Khomyakova, Alexander Y. Merkel, Alexander I. Slobodkin, Dimitry Y. Sorokin
Frontiers in Microbiology.2023;[Epub] CrossRef - Description of Xanthocytophaga agilis sp. nov. and Xanthocytophaga flavus sp. nov. of the new genus Xanthocytophaga gen. nov and the proposal of Rhodocytophagaceae fam. nov. within the order Cytophagales
Xianjiao Zhang, Guang-Da Feng, Yang Liu, Fan Yang, Yanxuan Li, Xiaoqin Deng, Honghui Zhu, Qing Yao
Archives of Microbiology.2023;[Epub] CrossRef - Draft genome sequence of Joostella atrarenae M1-2T with cellulolytic and hemicellulolytic ability
Kok Jun Liew, Muhammad Ramziuddin Zakaria, Clarine Wan Ling Hong, Melvin Chun Yun Tan, Chun Shiong Chong
3 Biotech.2023;[Epub] CrossRef - Transcriptional Landscapes of Herelleviridae Bacteriophages and Staphylococcus aureus during Phage Infection: An Overview
Maria Kornienko, Dmitry Bespiatykh, Roman Gorodnichev, Narina Abdraimova, Egor Shitikov
Viruses.2023; 15(7): 1427. CrossRef -
Tenacibaculum tangerinum sp. nov., isolated from a tidal flat sediment
Sang Hyun Lee, Yeonjae Yoo, Dae Young Kwon, Jong Seong Khim, Xiaoyue Xu, Bogun Kim, In-Geol Choi, Jae-Jin Kim
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Mesonia aestuariivivens sp. nov., isolated from a tidal flat
Sooyeon Park, Jung-Sook Lee, Wonyong Kim, Jung-Hoon Yoon
Archives of Microbiology.2022;[Epub] CrossRef - Metabacillus rhizolycopersici sp. nov., Isolated from the Rhizosphere Soil of Tomato Plants
Rong Ma, Shan-Wen He, Xing Wang, Kyu Kyu Thin, Ji-Gang Han, Xiao-Xia Zhang
Current Microbiology.2022;[Epub] CrossRef - Longitalea arenae gen. nov., sp. nov. and Longitalea luteola sp. nov., two new members of the family Chitinophagaceae isolated from desert soil
Shuai Li, Lei Dong, Jia-Rui Han, Guo-Yuan Shi, Chun-Yan Lu, Lu Xu, Wen-Hui Lian, Dalal Hussien M. Alkhalifah, Wael N. Hozzein, Wen-Jun Li
Archives of Microbiology.2022;[Epub] CrossRef - Description of Deefgea piscis sp. nov., and Deefgea tanakiae sp. nov., isolated from the gut of Korean indigenous fish
Do-Hun Gim, So-Yeon Lee, Jeong Eun Han, Jae-Yun Lee, Seo Min Kang, Jin-Woo Bae
Journal of Microbiology.2022; 60(11): 1061. CrossRef -
Fibrella aquatilis sp. nov., Fibrella rubiginis sp. nov. and Fibrella forsythiae sp. nov., isolated from freshwater, rusty iron and forsythia flower
Heeyoung Kang, Haneul Kim, Seokhyeon Bae, Kiseong Joh
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
Pedomonas mirosovicensis gen. nov., sp. nov., a bacterium isolated from soil with the aid of Micrococcus luteus culture supernatant containing resuscitation-promoting factor
Marco A. Lopez Marin, Jachym Suman, Kunal Jani, Pavel Ulbrich, Tomas Cajthaml, Petr Pajer, Jacqueline Wolf, Meina Neumann-Schaal, Michal Strejcek, Ondrej Uhlik
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
Psychroflexus curvus sp. nov., Psychroflexus longus sp. nov. and Psychroflexus montanilacus sp. nov., isolated from salt lakes on the Tibetan Plateau
Huibin Lu, Peixin Gao, Dorji Phurbu, Qinglong Wu, Peng Xing
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
(Meta)Genomic Analysis Reveals Diverse Energy Conservation Strategies Employed by Globally Distributed
Gemmatimonadota
Xiaowei Zheng, Xin Dai, Yaxin Zhu, Jian Yang, Hongchen Jiang, Hailiang Dong, Li Huang, Steven J. Hallam
mSystems.2022;[Epub] CrossRef - Complete Genome Sequence of Weissella cibaria NH9449 and Comprehensive Comparative-Genomic Analysis: Genomic Diversity and Versatility Trait Revealed
Komwit Surachat, Duangporn Kantachote, Monwadee Wonglapsuwan, Arnon Chukamnerd, Panchalika Deachamag, Pimonsri Mittraparp-arthorn, Kongpop Jeenkeawpiam
Frontiers in Microbiology.2022;[Epub] CrossRef - Sulfuricystis multivorans gen. nov., sp. nov. and Sulfuricystis thermophila sp. nov., facultatively autotropic sulfur-oxidizing bacteria isolated from a hot spring, and emended description of the genus Rugosibacter
Hisaya Kojima, Miho Watanabe, Naoyuki Miyata, Manabu Fukui
Archives of Microbiology.2022;[Epub] CrossRef - Draft genome sequence of Thermovorax subterraneus 70BT, a thermophile isolated from a geothermally active underground mine that produces hydrogen
Kian Mau Goh, Kok Jun Liew, Saleha Shahar, Iffah Izzati Zakaria, Ummirul Mukminin Kahar
Data in Brief.2022; 45: 108695. CrossRef - Consumption of N2O by Flavobacterium azooxidireducens sp. nov. Isolated from Decomposing Leaf Litter of Phragmites australis (Cav.)
Undine Behrendt, Tobias Spanner, Jürgen Augustin, Dominik H. Zak, Marcus A. Horn, Steffen Kolb, Andreas Ulrich
Microorganisms.2022; 10(11): 2304. CrossRef - Citrobacter Sp. Y3 Harboring a Novel Gene Hbcd-Hd-1 Mineralizes Hexabromocyclododecane (Hbcd) with New Metabolic Pathways Based on Multi-Omics Characterization
Xingxing Peng, Tianyu Li, Qihang Zheng, Yingyuan Lu, Yuzhe He, Yetao Tang, Rongliang Qiu
SSRN Electronic Journal.2022;[Epub] CrossRef -
Neokomagataea anthophila sp. nov., an osmotolerant acetic acid bacterium isolated in Thailand and emended description of the genus Neokomagataea
Piyanat Charoenyingcharoen, Pattaraporn Yukphan, Sukunphat Malimas, Somsak Likhitrattanapisal, Somboon Tanasupawat, Yuzo Yamada
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Description of Flavobacterium cyclinae sp. nov. and Flavobacterium channae sp. nov., isolated from the intestines of Cyclina sinensis (Corb shell) and Channa argus (Northern snakehead)
Seomin Kang, Jae-Yun Lee, Jeong Eun Han, Yun-Seok Jeong, Do-Hun Gim, Jin-Woo Bae
Journal of Microbiology.2022; 60(9): 890. CrossRef - Systematic whole-genome sequencing reveals an unexpected diversity among actinomycetoma pathogens and provides insights into their antibacterial susceptibilities
Andrew Keith Watson, Bernhard Kepplinger, Sahar Mubarak Bakhiet, Najwa Adam Mhmoud, Jonathan Chapman, Nick EE Allenby, Katarzyna Mickiewicz, Michael Goodfellow, Ahmed Hassan Fahal, Jeff Errington, David John Chandler
PLOS Neglected Tropical Diseases.2022; 16(7): e0010128. CrossRef - Insights into ecological roles of uncultivated bacteria in Katase hot spring sediment from long-read metagenomics
Shingo Kato, Sachiko Masuda, Arisa Shibata, Ken Shirasu, Moriya Ohkuma
Frontiers in Microbiology.2022;[Epub] CrossRef -
Apilactobacillus apisilvae sp. nov., Nicolia spurrieriana gen. nov. sp. nov., Bombilactobacillus folatiphilus sp. nov. and Bombilactobacillus thymidiniphilus sp. nov., four new lactic acid bacterial isolates from stingless bees Tetragonula ca
Scott A. Oliphant, Nathan S. Watson-Haigh, Krista M. Sumby, Jennifer Gardner, Scott Groom, Vladimir Jiranek
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Description of Prasinibacter corallicola gen. nov., sp. nov., a zeaxanthin-producing bacterium isolated from stony coral Porites lutea
Guanghua Wang, Jianfeng Liu, Yuanjin Li, Jin Li, Jixin Luo, Biao Chen, Zhiheng Liao, Hongfei Su, Jiayuan Liang, Kefu Yu
Antonie van Leeuwenhoek.2022; 115(7): 933. CrossRef -
Faunimonas pinastri gen. nov., sp. nov., an endophyte from a pine tree of the family Pleomorphomonadaceae, class Alphaproteobacteria
Diogo N. Proença, William B. Whitman, Nicole Shapiro, Tanja Woyke, Nikos C. Kyrpides, Paula V. Morais
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Physiological and genomic characterisation of Luteimonas fraxinea sp. nov., a bacterial species associated with trees tolerant to ash dieback
Kristina Ulrich, Regina Becker, Undine Behrendt, Michael Kube, Volker Schneck, Andreas Ulrich
Systematic and Applied Microbiology.2022; 45(4): 126333. CrossRef - Neglectibacter timonensis gen. nov., sp. nov. and Scatolibacter rhodanostii gen. nov., sp. nov., two anaerobic bacteria isolated from human stool samples
Rita Zgheib, Ahmad Ibrahim, Hussein Anani, Sokhna Ndongo, Melhem Bilen, Nicholas Armstrong, Magali Richez, Didier Raoult, Pierre-Edouard Fournier
Archives of Microbiology.2022;[Epub] CrossRef - A stable home for an equine pathogen: valid publication of the binomial Prescottella equi gen. nov., comb. nov., and reclassification of four rhodococcal species into the genus Prescottella.
Vartul Sangal, Michael Goodfellow, Amanda L. Jones, Iain C. Sutcliffe
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
Devosia ureilytica sp. nov., isolated from Kuche River in China
Bin-Bin Li, Xiao-Juan Zhang, Danni Wu, Dan-Dan Zhang, Bao-Zhu Fang, Hong-Can Liu, Yu-Guang Zhou, Man Cai, Wen-Jun Li, Guo-Xing Nie
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
Sphingomonas arenae sp. nov., isolated from desert soil
Lei Dong, Shuai Li, Wen-Hui Lian, Qi-Chuang Wei, Osama Abdalla Abdelshafy Mohamad, Wael N. Hozzein, Iftikhar Ahmed, Wen-Jun Li
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Prokaryotes of renowned Karlovy Vary (Carlsbad) thermal springs: phylogenetic and cultivation analysis
Tereza Smrhova, Kunal Jani, Petr Pajer, Gabriela Kapinusova, Tomas Vylita, Jachym Suman, Michal Strejcek, Ondrej Uhlik
Environmental Microbiome.2022;[Epub] CrossRef - Dongia deserti sp. nov., Isolated from the Gurbantunggut Desert Soil
Chun-Yan Lu, Lei Dong, Dong Wang, Shuai Li, Bao-Zhu Fang, Ming-Xian Han, Feng Liu, Hong-Chen Jiang, Iftikhar Ahmed, Wen-Jun Li
Current Microbiology.2022;[Epub] CrossRef - Cell Wall Glycopolymers as a Diagnostic Trait of Arthrobacter crystallopoietes
N. V. Potekhina, E. V. Ariskina, A. S. Shashkov, T. M. Tul’skaya, L. I. Evtushenko
Microbiology.2022; 91(3): 259. CrossRef - Variovorax terrae sp. nov. Isolated from Soil with Potential Antioxidant Activity
Chae Yung Woo, Jaisoo Kim
Journal of Microbiology and Biotechnology.2022; 32(7): 855. CrossRef -
Parasphingorhabdus cellanae sp. nov., isolated from the gut of a Korean limpet, Cellana toreuma
Ji-Ho Yoo, Jeong Eun Han, June-Young Lee, Su-Won Jeong, Yun-Seok Jeong, Jae-Yun Lee, So-Yeon Lee, Hojun Sung, Euon Jung Tak, Hyun Sik Kim, Pil Soo Kim, Jee-Won Choi, Do-Yeon Kim, In Chul Jeong, Do-Hun Gim, Seo Min Kang, Jin-Woo Bae
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
Algiphilus acroporae sp. nov. and Coraliihabitans acroporae gen. nov. sp. nov., isolated from scleractinian coral Acropora digitifera
Hao Sun, Huina Zheng, Baolin Liao, Bogui Chen, Aihua Li, Baohua Xiao
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Comparative Genomics Reveal the Animal-Associated Features of the Acanthopleuribacteraceae Bacteria, and Description of Sulfidibacter corallicola gen. nov., sp., nov.
Guanghua Wang, Yuanjin Li, Jianfeng Liu, Biao Chen, Hongfei Su, Jiayuan Liang, Wen Huang, Kefu Yu
Frontiers in Microbiology.2022;[Epub] CrossRef - Oceanobacillus alkalisoli sp. nov., an alkaliphilic bacterium isolated from saline-alkaline soil
Pin-Jiao Jin, Lei Sun, Manik Prabhu Narsing Rao, Jian-Yu Jiao, Xiu-Jun Sun, Wen-Jun Li, Shuang Wang
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
Sabulibacter ruber gen. nov., sp. nov., a novel bacterium in the family Hymenobacteraceae, isolated from desert soil
Wen-Hui Lian, Shuai Li, Zhi-Liang Lin, Jia-Rui Han, Osama Abdalla Abdelshafy Mohamad, Li Li, Ying Lin, Wael N. Hozzein, Lei Dong, Wen-Jun Li
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
Sessilibacter corallicola gen. nov., sp. nov., a sessile bacterium isolated from coral Porites lutea
Jianfeng Liu, Jin Li, Jixin Luo, Yuanjin Li, Zian Yang, Chengli Huang, Feilong Sun, Guanghua Wang
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Genomic and physiological analysis of C50 carotenoid-producing novel Halorubrum ruber sp. nov.
Chi Young Hwang, Eui-Sang Cho, Won Jong Rhee, Eunjung Kim, Myung-Ji Seo
Journal of Microbiology.2022; 60(10): 1007. CrossRef -
Novosphingobium percolationis sp. nov. and Novosphingobium huizhouense sp. nov., isolated from landfill leachate of a domestic waste treatment plant
Xiaoling He, Huibin Lu, Wenzhe Hu, Tongchu Deng, Xiaofan Gong, Xunan Yang, Da Song, Mei He, Meiying Xu
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
Enterovibrio paralichthyis sp. nov., isolated from the gut of an olive flounder Paralichthys olivaceus
Young-Ok Kim, In-Suk Park, Dong-Gyun Kim, Sooyeon Park, Sung Hoon Han, Jung-Hoon Yoon
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Desulfofustis limnaeus sp. nov., a freshwater sulfate-reducing bacterium isolated from marsh soil
Miho Watanabe, Ayaka Takahashi, Hisaya Kojima, Naoyuki Miyata, Manabu Fukui
Archives of Microbiology.2022;[Epub] CrossRef - Taxogenomic status of phylogenetically distant Frankia clusters warrants their elevation to the rank of genus: A description of Protofrankia gen. nov., Parafrankia gen. nov., and Pseudofrankia gen. nov. as three novel genera within the family Frankiaceae
Maher Gtari
Frontiers in Microbiology.2022;[Epub] CrossRef - Genomic and Physiological Characterization of Metabacillus flavus sp. nov., a Novel Carotenoid-Producing Bacilli Isolated from Korean Marine Mud
Chi Young Hwang, Eui-Sang Cho, Deok Jun Yoon, In-Tae Cha, Dong-Hyun Jung, Young-Do Nam, So-Lim Park, Seong-Il Lim, Myung-Ji Seo
Microorganisms.2022; 10(5): 979. CrossRef -
Nocardioides palaemonis sp. nov. and Tessaracoccus palaemonis sp. nov., isolated from the gastrointestinal tract of lake prawn
Do-Yeon Kim, In-Chul Jeong, So-Yeon Lee, Yun-Seok Jeong, Jeong Eun Han, Euon Jung Tak, June-Young Lee, Pil Soo Kim, Dong-Wook Hyun, Jin-Woo Bae
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Description of Ornithinimicrobium ciconiae sp. nov., and Ornithinimicrobium avium sp. nov., isolated from the faeces of the endangered and near-threatened birds
So-Yeon Lee, Hojun Sung, Pil Soo Kim, Hyun Sik Kim, Jae-Yun Lee, June-Young Lee, Yun-Seok Jeong, Euon Jung Tak, Jeong Eun Han, Dong-Wook Hyun, Jin-Woo Bae
Journal of Microbiology.2021; 59(11): 978. CrossRef - Phylogenomic Analyses of the Genus Pseudomonas Lead to the Rearrangement of Several Species and the Definition of New Genera
Zaki Saati-Santamaría, Ezequiel Peral-Aranega, Encarna Velázquez, Raúl Rivas, Paula García-Fraile
Biology.2021; 10(8): 782. CrossRef -
Pseudomarimonas arenosa gen. nov., sp. nov. isolated from marine sand
Veeraya Weerawongwiwat, Jong-Hwa Kim, Jung-Hoon Yoon, Jung-Sook Lee, Ampaitip Sukhoom, Wonyong Kim
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef -
Yangia mangrovi sp. nov., a novel member of the Roseobacter clade isolated from mangrove soil and emended description of Yangia pacifica Dai et al. 2006
Ashish Verma, Shiva S. Sundharam, Yash Pal, Bhawana Bisht, Pooja Yadav, Srinivasan Krishnamurthi
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef
- Inhibitory Effect of Methyl Gallate and Gallic Acid on Oral Bacteria
-
Mi-Sun Kang , Jong-Suk Oh , In-Chol Kang , Suk-Jin Hong , Choong-Ho Choi
-
J. Microbiol. 2008;46(6):744-750. Published online December 24, 2008
-
DOI: https://doi.org/10.1007/s12275-008-0235-7
-
-
39
View
-
0
Download
-
204
Crossref
-
Abstract
-
This study examined the ability of methyl gallate (MG) and gallic acid (GA), the main compounds of gallotannins in Galla Rhois, to inhibit the proliferation of oral bacterial and the in vitro formation of Streptococcus mutans biofilms. The antimicrobial activities of these compounds were evaluated in vitro using the broth microdilution method and a beaker-wire test. Both MG and GA had inhibitory effects on the growth of cariogenic (MIC<8 mg/ml) and periodontopathic bacteria (MIC=1 mg/ml). Moreover, these compounds significantly inhibited the in vitro formation of S. mutans biofilms (MG, 1 mg/ml; GA, 4 mg/ml; P<0.05). MG was more effective in inhibiting bacterial growth and the formation of S. mutans biofilm than GA. In conclusion, MG and GA can inhibit the growth of oral pathogens and S. mutans biofilm formation, and may be used to prevent the formation of oral biofilms.
-
Citations
Citations to this article as recorded by

- Antibacterial activity of gallic acid and methyl gallate against emerging non-fermenting bacilli
Orlando Flores-Maldonado, Jorge Dávila-Aviña, Gloria M. González, Miguel A. Becerril-García, Ana L. Ríos-López
Folia Microbiologica.2025; 70(1): 127. CrossRef - Bioactive compounds from Actinidia arguta fruit as a new strategy to fight glioblastoma
Catarina Macedo, Paulo C. Costa, Francisca Rodrigues
Food Research International.2024; 175: 113770. CrossRef - Antibacterial efficacy of copper-based metal–organic frameworks against Escherichia coli and Lactobacillus
Sandy Elmehrath, Khansa Ahsan, Nayla Munawar, Ahmed Alzamly, Ha L. Nguyen, Yaser Greish
RSC Advances.2024; 14(22): 15821. CrossRef - Potential therapeutic agents of Bombyx mori silk cocoon extracts from agricultural product for inhibition of skin pathogenic bacteria and free radicals
Thida Kaewkod, Puangphaka Kumseewai, Sureeporn Suriyaprom, Varachaya Intachaisri, Nitsanat Cheepchirasuk, Yingmanee Tragoolpua
PeerJ.2024; 12: e17490. CrossRef - Gallic acid: design of a pyrogallol-containing hydrogel and its biomedical applications
Wu Weian, Ye Yunxin, Wang Ziyan, Jiang Qianzhou, Guo Lvhua
Biomaterials Science.2024; 12(6): 1405. CrossRef - Methyl gallate attenuates virulence and decreases antibiotic resistance in extensively drug-resistant Pseudomonas aeruginosa
Orlando Flores-Maldonado, Cristina I. Lezcano-Domínguez, Jorge Dávila-Aviña, Gloria M. González, Ana L. Ríos-López
Microbial Pathogenesis.2024; 194: 106830. CrossRef - Antimicrobial Effect of Lippia citriodora Extract in Combination with Gallic Acid or Octyl Gallate on Bacteria from Meat
Javier Rúa, Javier Sanz-Gómez, Sheila Maestro, Irma Caro, María Rosario García-Armesto
Foods.2024; 13(11): 1643. CrossRef - Methyl gallate isolated from partridge tea (Mallotus oblongifolius (Miq.) Müll.Arg.) inhibits the biofilms and virulence factors of Burkholderia thailandensis
Kai-Zhong Xu, Shi-Liang Xiang, Ying-Jie Wang, Bo Wang, Ai-Qun Jia
Journal of Ethnopharmacology.2024; 320: 117422. CrossRef - Ameliorating impaired cardiac function in myocardial infarction using exosome-loaded gallic-acid-containing polyurethane scaffolds
Ankita Das, Aman Nikhil, Parvaiz Ahmad Shiekh, Babita Yadav, Kumaravelu Jagavelu, Ashok Kumar
Bioactive Materials.2024; 33: 324. CrossRef - Anti-Malassezia globosa (MYA-4889, ATCC) activity of Thai propolis from the stingless bee Geniotrigona thoracica
Kawisara Konsila, Wanchai Assavalapsakul, Preecha Phuwapraisirisan, Chanpen Chanchao
Heliyon.2024; 10(8): e29421. CrossRef - Polyphenols and Their Nanoformulations as Potential Antibiofilm Agents Against Multidrug-Resistant Pathogens
Modawy EM Elkhalifa, Muhammad Ashraf, Alshebli Ahmed, Assad Usman, Alashary AE Hamdoon, Mohammed A Elawad, Meshari G Almalki, Osama F Mosa, Laziz N Niyazov, Muhammad Ayaz
Future Microbiology.2024; 19(3): 255. CrossRef - Chemical aspects of polyphenol-protein interactions and their antibacterial activity
Sanusi Shamsudeen Nassarawa, Gulzar Ahmad Nayik, S. Dutta Gupta, Franklin Ore Areche, Yash D. Jagdale, Mohammad Javed Ansari, Hassan A. Hemeg, Ammar AL-Farga, Saqer S. Alotaibi
Critical Reviews in Food Science and Nutrition.2023; 63(28): 9482. CrossRef - Efficacy of Elaeagnus umbellata leaves on prevention
of cadmium-induced toxicity in HepG2 cells
Jae-Yeul Lee, Seun-Ah Yang, Won-Bin Bae
Korean Journal of Food Preservation.2023; 30(5): 797. CrossRef - Trewia nudiflora Linn, a Medicinal Plant: Allelopathic Potential and Characterization of Bioactive Compounds from Its Leaf Extracts
Mst. Rokeya Khatun, Shunya Tojo, Toshiaki Teruya, Hisashi Kato-Noguchi
Horticulturae.2023; 9(8): 897. CrossRef - Alkyl Gallates as Potential Antibiofilm Agents: A Review
Mahmoud Rayan, Saleh Abu Lafi, Mizied Falah, Tomas Kacergius, Agne Kirkliauskiene, Vika Gabe, Anwar Rayan
Molecules.2023; 28(4): 1751. CrossRef - Application of the herbal chemical marker ranking system (Herb MaRS) to the standardization of herbal raw materials: a case study
Bruhan Kaggwa, Godwin Anywar, Edson Ireeta Munanura, Raphael Wangalwa, Henry Kyeyune, Hedmon Okella, Fadhiru Pakoyo Kamba, Ogwang Patrick Engeu
BMC Complementary Medicine and Therapies.2023;[Epub] CrossRef - Simultaneous isoquercitin and gallic acid production of Aspergillus niger on Triphala byproduct under solid state fermentation in packed-bed bioreactor
Pattarabhorn Pakaweerachat, Worasaung Klinthong, Kazuhisa Ohtaguchi, Teerin Chysirichote
AIMS Agriculture and Food.2023; 8(2): 359. CrossRef - Antioxidant and antibacterial activity of Apis laboriosa honey against Salmonella enterica serovar Typhimurium
Weihua Tan, Yuanyuan Tian, Qingya Zhang, Siwei Miao, Wenrong Wu, Xiaoqing Miao, Haiou Kuang, Wenchao Yang
Frontiers in Nutrition.2023;[Epub] CrossRef - New Palladium(II) Complexes Containing Methyl Gallate and Octyl Gallate: Effect against Mycobacterium tuberculosis and Campylobacter jejuni
Raphael Tristão Cruvinel Silva, Micaela Guidotti-Takeuchi, Jéssica Laura Miranda Peixoto, Fernanda Manaia Demarqui, Ananda Paula Mori, Carolyne Ferreira Dumont, Gabriella Rayane Aparecida Ferreira, Gabriele de Menezes Pereira, Daise Aparecida Rossi, Pedro
Molecules.2023; 28(9): 3887. CrossRef - Methyl gallate: Review of pharmacological activity
Huaguo Liang, Qingsong Huang, Li Zou, Peng Wei, Jiazheng Lu, Yongli Zhang
Pharmacological Research.2023; 194: 106849. CrossRef - Assessing the Potential of Gallic Acid and Methyl Gallate to Enhance the Efficacy of β-Lactam Antibiotics against Methicillin-Resistant Staphylococcus aureus by Targeting β-Lactamase: In Silico and In Vitro Studies
Pimsumon Jiamboonsri, Chatchakorn Eurtivong, Sompit Wanwong
Antibiotics.2023; 12(11): 1622. CrossRef - Drug-Repurposing Screening Identifies a Gallic Acid Binding Site on SARS-CoV-2 Non-structural Protein 7
Yushu Gu, Miaomiao Liu, Bart L. Staker, Garry W. Buchko, Ronald J. Quinn
ACS Pharmacology & Translational Science.2023; 6(4): 578. CrossRef - Inhibition of Pseudomonas aeruginosa quorum sensing by methyl gallate from Mangifera indica
Nourhan G. Naga, Ahmed A. Zaki, Dalia E. El-Badan, Heba S. Rateb, Khaled M. Ghanem, Mona I. Shaaban
Scientific Reports.2023;[Epub] CrossRef - Polyphenolic natural products as photosensitizers for antimicrobial photodynamic therapy: recent advances and future prospects
Xiaoyun Wang, Lian Wang, Reza Fekrazad, Lu Zhang, Xian Jiang, Gu He, Xiang Wen
Frontiers in Immunology.2023;[Epub] CrossRef - Influence of Gallic Acid-Containing Mouth Spray on Dental Health and Oral Microbiota of Healthy Dogs: A Pilot Study
Nichaphat Thongma, Bhagavathi Sundaram Sivamaruthi, Muruganantham Bharathi, Chawin Tansrisook, Sartjin Peerajan, Kittidaj Tanongpitchayes, Natcha Chawnan, Subramanian Rashmi, Kriangkrai Thongkorn, Chaiyavat Chaiyasut
Veterinary Sciences.2023; 10(7): 424. CrossRef - Effects of Secondary Metabolites of Rice on Brown Planthopper and Its Symbionts
Ziyuan Deng, Chengling Lai, Jun Zhang, Fan Sun, Danting Li, Peiying Hao, Xuping Shentu, Kun Pang, Xiaoping Yu
International Journal of Molecular Sciences.2023; 25(1): 386. CrossRef - Pyrogallol impairs staphylococcal biofilm formation via induction of bacterial oxidative stress
Katharina H C Roese, Christina Torlone, Lauren A Cooper, Lee Esposito, Amy M Deveau, Ursula S R Röse, Kristin M Burkholder
Journal of Applied Microbiology.2023;[Epub] CrossRef - Influence of Gallic Acid-Containing Mouth Spray on Dental Health and Oral Microbiota of Healthy Cats—A Pilot Study
Chaiyavat Chaiyasut, Bhagavathi Sundaram Sivamaruthi, Muruganantham Bharathi, Chawin Tansrisook, Sartjin Peerajan, Khontaros Chaiyasut, Suchanat Khongtan, Kittidaj Tanongpitchayes, Nichaphat Thongma, Natcha Chawnan, Kriangkrai Thongkorn
Veterinary Sciences.2022; 9(7): 313. CrossRef - Gallic Acid Reactive Extraction with and without 1-Octanol as Phase Modifier: Experimental and Modeling
Alexandra Cristina Blaga, Elena Niculina Dragoi, Raluca Elena Munteanu, Dan Cascaval, Anca Irina Galaction
Fermentation.2022; 8(11): 633. CrossRef - Determination of time dependent antibacterial activities of curcumin, carvacrol and styrax liquidus on Salmonella Enteritidis
Erhan KEYVAN, Hidayet TUTUN, Hatice Ahu KAHRAMAN, Erdi ŞEN, Ahu DEMİRTAŞ, Soner DÖNMEZ, Ali Özhan AKYÜZ
Ankara Üniversitesi Veteriner Fakültesi Dergisi.2022; 69(4): 355. CrossRef - Experimental Glass Ionomer Cement Containing Gallic acid: Antibacterial Effect and Fluoride Release an in vitro Study
Saher M. Elsharkawy, Yasser F. Gomaa, Reem Gamal
Open Access Macedonian Journal of Medical Sciences.2022; 10(D): 131. CrossRef - Nutraceutical Profile of “Carosello” (Cucumis melo L.) Grown in an Out-of-Season Cycle under LEDs
Onofrio Davide Palmitessa, Miriana Durante, Annalisa Somma, Giovanni Mita, Massimiliano D’Imperio, Francesco Serio, Pietro Santamaria
Antioxidants.2022; 11(4): 777. CrossRef - Antibacterial Fractions from Erodium cicutarium Exposed—Clinical Strains of Staphylococcus aureus in Focus
Vanja Ljoljić Bilić, Uroš M. Gašić, Dušanka Milojković-Opsenica, Hrvoje Rimac, Jadranka Vuković Rodriguez, Josipa Vlainić, Diana Brlek-Gorski, Ivan Kosalec
Antibiotics.2022; 11(4): 492. CrossRef -
Corchorus olitorius L. (Jute) leaf and seed extracts exerted high antibacterial activity against food and plant pathogenic bacteria
Özlem Darcansoy İşeri, Didem Aksoy Körpe, Feride Iffet Sahin, Evren Cabi, Mehmet Haberal
The EuroBiotech Journal.2022; 6(3): 105. CrossRef - Antibacterial Activity of Crocus sativus L. Petals Extracts against Foodborne Pathogenic and Spoilage Microorganisms, with a Special Focus on Clostridia
Sara Primavilla, Cinzia Pagano, Rossana Roila, Raffaella Branciari, David Ranucci, Andrea Valiani, Maurizio Ricci, Luana Perioli
Life.2022; 13(1): 60. CrossRef - Screen-printed electrode modified by Au/NH2-MIL-125(Ti) composite for electrochemical sensing performance of gallic acid in green tea and urine samples
K.V. Kavya, Stella Vargheese, Dhanaprabhu Pattappan, R.T. Rajendra Kumar, Yuvaraj Haldorai
Chemical Physics Letters.2022; 807: 140074. CrossRef - Discovery of a Novel Inhibitor Structure of Mycobacterium tuberculosis Isocitrate Lyase
Changyuan Duan, Qihua Jiang, Xue Jiang, Hongwei Zeng, Qiaomin Wu, Yang Yu, Xiaolan Yang
Molecules.2022; 27(8): 2447. CrossRef - New Perspectives on the Sustainable Employment of Chestnut Shells as Active Ingredient against Oral Mucositis: A First Screening
Ana Sofia Ferreira, Ana Margarida Silva, Diana Pinto, Manuela M. Moreira, Ricardo Ferraz, Jaroslava Švarc-Gajić, Paulo C. Costa, Cristina Delerue-Matos, Francisca Rodrigues
International Journal of Molecular Sciences.2022; 23(23): 14956. CrossRef -
Gallic Acid Leads to Cell Death of
Candida Albicans
by the Apoptosis Mechanism
Ito Liberato, Leticia A Lino, Juan K D Souza, João B A Neto, Livia G A V Sá, Vitória P F Cabral, Cecília R Silva, Bruno C Cavalcanti, Manoel O Moraes, Valder N Freire, Hélio V N Júnior, Claudia R Andrade
Future Microbiology.2022; 17(8): 599. CrossRef - Influence of Green Tea Added to Cherry Wine on Phenolic Content, Antioxidant Activity and Alpha-Glucosidase Inhibition during an In Vitro Gastrointestinal Digestion
Małgorzata Lasik-Kurdyś, Małgorzata Gumienna, Barbara Górna, Noranizan Mohd Adzahan
Foods.2022; 11(20): 3298. CrossRef - Cytotoxic Effect of Puya chilensis Collected in Central Chile
César Echeverria-Echeverria, Aly Valderrama-Villarroel, Marcelo Ortega, Rodrigo A. Contreras, Gustavo E. Zúñiga, Leonor Alvarado-Soto, Rodrigo Ramírez-Tagle
Natural Product Communications.2022;[Epub] CrossRef - Microwave-assisted functionalization of graphene oxide with amino acid behaviour on the chemical constituents and specific molecular pathways of pearl millet grains under saline conditions
Noura E. Mahmoud, A.H. Hassan, Reda M. Abdelhameed
Plant Nano Biology.2022; 2: 100020. CrossRef - Effect of phenolic compounds and cold shock on survival and virulence of Escherichia coli pathotypes
Ana L. Ríos‐López, Norma Heredia, Santos García, José Á. Merino‐Mascorro, Luisa Y. Solís‐Soto, Jorge E. Dávila‐Aviña
Journal of Food Safety.2022;[Epub] CrossRef - Tailored silver nanoparticles capped with gallic acid and its potential toxicity via ROS mediated pathway against osteosarcoma cells
Shahnaz Majeed, Mohammed Danish, Norul Aini Zakariya, Rokiah Hashim, Mohammed Tahir Ansari, Sreenivas Patro Sisinthy
Materials Today Communications.2022; 32: 103844. CrossRef - Effects of antibacterial peptide-producing Bacillus subtilis, gallic acid, and cellulase on fermentation quality and bacterial community of whole-plant corn silage
Zhiheng Zhang, Yuqin Wang, Saiqiao Wang, Lu Zhao, Binglei Zhang, Wanhang Jia, Zhenhan Zhai, Lingping Zhao, Yuanxiao Li
Frontiers in Microbiology.2022;[Epub] CrossRef - On the mechanism behind enhanced antibacterial activity of alkyl gallate esters against foodborne pathogens and its application in Chinese icefish preservation
Yu-gang Shi, Run-run Zhang, Chen-min Zhu, Xian-rui Liang, Rammile Ettelaie, Lai Jiang, Shan Lin
Food Microbiology.2021; 99: 103817. CrossRef - Antimicrobial and antioxidant potential of a standardized Ayurvedic formulation explains its clinical efficacy as gargles in post-radiotherapy oral cancer patients
Sandeep Chavan, Sushama Bhuvad, Bhagyashri Kumbhlakar, Jyoti Auti, Tanhaji Walunj, Shridevi Pathak, Rahul Tanpure, Shweta Gujar, Jagdish Shinde, Arvind Kulkarni, Vidya Gupta, Vineeta Deshmukh, Sadanand Sardeshmukh
Journal of Herbal Medicine.2021; 30: 100510. CrossRef - Anticariogenic activities of Libidibia ferrea, gallic acid and ethyl gallate against Streptococcus mutans in biofilm model
Manuela Ribeiro Passos, Rafael Silva Almeida, Brenda Oliveira Lima, Jeisa Zielle de Souza Rodrigues, Nayara Silva de Macêdo Neres, Louise Soares Pita, Patrick D'Orleans Farias Marinho, Iago Almeida Santos, Jamile Pinheiro da Silva, Milena Cardoso Oliveira
Journal of Ethnopharmacology.2021; 274: 114059. CrossRef - Calcium‐Based Metal–Organic Frameworks and Their Potential Applications
Shikai Xian, Yuhan Lin, Hao Wang, Jing Li
Small.2021;[Epub] CrossRef - Mixed biofilms of pathogenic Candida-bacteria: regulation mechanisms and treatment strategies
Fazlurrahman Khan, Nilushi Indika Bamunuarachchi, Dung Thuy Nguyen Pham, Nazia Tabassum, Mohd Sajjad Ahmad Khan, Young-Mog Kim
Critical Reviews in Microbiology.2021; 47(6): 699. CrossRef - Green Approach in Synthesis of Bio-Inspired Materials
Anamarija Stanković, Martina Medvidović-Kosanović, Jasminka Kontrec, Branka Njegić Džakula
Crystals.2021; 11(10): 1243. CrossRef - Calcium Oxalate and Gallic Acid: Structural Characterization and Process Optimization toward Obtaining High Contents of Calcium Oxalate Monohydrate and Dihydrate
Silvija Šafranko, Sara Goman, Dominik Goman, Stela Jokić, Ida Delač Marion, Nives Matijaković Mlinarić, Atiđa Selmani, Martina Medvidović-Kosanović, Anamarija Stanković
Crystals.2021; 11(8): 954. CrossRef - Methyl gallate, gallic acid-derived compound, inhibit cell proliferation through increasing ROS production and apoptosis in hepatocellular carcinoma cells
Chien-Yu Huang, Yu-Jia Chang, Po-Li Wei, Chin-Sheng Hung, Weu Wang, Irina V. Lebedeva
PLOS ONE.2021; 16(3): e0248521. CrossRef - Galla Chinensis, a Traditional Chinese Medicine: Comprehensive review of botany, traditional uses, chemical composition, pharmacology and toxicology
Yuan-yuan Ren, Xiao-rui Zhang, Ting-na Li, Yi-jia Zeng, Jin Wang, Qin-wan Huang
Journal of Ethnopharmacology.2021; 278: 114247. CrossRef - Effects of Gallic Acid on Fermentation Parameters, Protein Fraction, and Bacterial Community of Whole Plant Soybean Silage
Cheng Wang, Mingyang Zheng, Shuo Wu, Xuan Zou, Xiaoyang Chen, Liangfa Ge, Qing Zhang
Frontiers in Microbiology.2021;[Epub] CrossRef - In vitro antibacterial activity of Loxostylis alata extracts and isolated compounds against Salmonella species
Dorcas A. Gado, Muna Ali Abdalla, Aroke S. Ahmed, Balungile Madikizela, Sanah M. Nkadimeng, Marthie M. Ehlers, Lyndy J. McGaw
BMC Complementary Medicine and Therapies.2021;[Epub] CrossRef - Impact of Foliar Application of Amino Acids on Total Phenols, Phenolic Acids Content of Different Mints Varieties under the Field Condition
Živilė Tarasevičienė, Aloyzas Velička, Aurelija Paulauskienė
Plants.2021; 10(3): 599. CrossRef - Influence of Gallic Acid and Thai Culinary Essential Oils on Antibacterial Activity of Nisin against Streptococcus mutans
Pimsumon Jiamboonsri, Pimpikar Kanchanadumkerng, Mohd Esa Norhaizan
Advances in Pharmacological and Pharmaceutical Sciences.2021; 2021: 1. CrossRef - Chinese gallnut (Galla chinensis) against Vibrio parahaemolyticus: In vitro activity and the use of medicated bath method to treat infected mud crab Scylla paramamosain
Qingyang Wu, Yang Jiang, Enzhu Chen, Changkao Mu, Khor Waiho
Aquaculture.2021; 539: 736632. CrossRef - HPLC-PDA-ESI-MS/MS Profiling and Anti-Biofilm Potential of Eucalyptussideroxylon Flowers
Mona M. Okba, Riham A. El-Shiekh, Mohammed Abu-Elghait, Mansour Sobeh, Rehab M. S. Ashour
Antibiotics.2021; 10(7): 761. CrossRef - Combating Biofilm by Targeting Its Formation and Dispersal Using Gallic Acid against Single and Multispecies Bacteria Causing Dental Plaque
Aqel Albutti, Muhammad Shoaib Gul, Muhammad Faisal Siddiqui, Farhana Maqbool, Fazal Adnan, Ihsan Ullah, Ziaur Rahman, Sadia Qayyum, Muhammad Ajmal Shah, Muhammad Salman
Pathogens.2021; 10(11): 1486. CrossRef - Antimicrobial mechanism of alkyl gallates against Escherichia coli and Staphylococcus aureus and its combined effect with electrospun nanofibers on Chinese Taihu icefish preservation
Yu-gang Shi, Run-run Zhang, Chen-min Zhu, Ming-feng Xu, Qing Gu, Rammile Ettelaie, Shan Lin, Yi-fan Wang, Xin-yi Leng
Food Chemistry.2021; 346: 128949. CrossRef - Chromatographic and Spectrophotometric Determination of Some Phenolic Compounds in Tridax procumbens Linn Stem
Akinshola Olabamiji Akinola, Funmilayo Enitan Adelowo
Chemistry Africa.2021; 4(1): 103. CrossRef - Bacterial ClpP Protease Is a Potential Target for Methyl Gallate
Dehong Zheng, Yanan Xu, Gaoqing Yuan, Xiaogang Wu, Qiqin Li
Frontiers in Microbiology.2021;[Epub] CrossRef - A coaxially structured trilayered gallic acid-based antioxidant vascular graft for treating coronary artery disease
Ankita Das, Parvaiz Ahmad Shiekh, Ashok Kumar
European Polymer Journal.2021; 143: 110203. CrossRef - Efficacy of germination and probiotic fermentation on underutilized cereal and millet grains
Savita Budhwar, Kashika Sethi, Manali Chakraborty
Food Production, Processing and Nutrition.2020;[Epub] CrossRef - 4-Ethoxybenzoic acid inhibits Staphylococcus aureus biofilm formation and potentiates biofilm sensitivity to vancomycin
Mariya Campbell, Chih-Yun Cho, Andrew Ho, Jye-Yu Huang, Brooke Martin, Eric S. Gilbert
International Journal of Antimicrobial Agents.2020; 56(3): 106086. CrossRef - Potential effects of Psidium sp., Mangifera sp., Mentha sp. and its mixture (PEM) in reducing bacterial populations in biofilms, adherence and acid production of S. sanguinis and S. mutans
Zaleha Shafiei, Zubaidah Haji Abdul Rahim, Koshy Philip, Nalina Thurairajah, Hashim Yaacob
Archives of Oral Biology.2020; 109: 104554. CrossRef - The effect of polyphenol-containing solutions on in situ biofilm formation on enamel and dentin
Qingping Xi, Wiebke Hoth-Hannig, Shuli Deng, Xiaoting Jin, Baiping Fu, Matthias Hannig
Journal of Dentistry.2020; 102: 103482. CrossRef - Pharmacological Research Progress on Antimicrobial Infection of Gallic Acid
娇 尹
Advances in Clinical Medicine.2020; 10(12): 2940. CrossRef - Anti-oxidant, anti-inflammatory, and anti-bacterial effects of
extracts from Elaeagnus umbellata leaves obtained using
different extract conditions
Ha-Rin Kang, Jong-Kang Jung, Se-Ho Park, Jae-Yeul Lee, Seun-Ah Yang
Korean Journal of Food Preservation.2020; 27(3): 374. CrossRef - Comparative effects of nisin and monensin on pure cultures of rumen bacteria
Ahu DEMİRTAŞ
Veteriner Hekimler Derneği Dergisi.2020; 91(1): 1. CrossRef - Effects of dietary gallic acid on growth performance, diarrhea incidence, intestinal morphology, plasma antioxidant indices, and immune response in weaned piglets
L. Cai, Y.P. Li, Z.X. Wei, X.L. Li, X.R. Jiang
Animal Feed Science and Technology.2020; 261: 114391. CrossRef - Residues from the Brazilian pepper tree (Schinus terebinthifolia Raddi) processing industry: Chemical profile and antimicrobial activity of extracts against hospital bacteria
Rodrigo Borges de Araujo Gomes, Erica Santana de Souza, Nataly Senna Gerhardt Barraqui, Cristina Luz Tosta, Ana Paula Ferreira Nunes, Ricardo Pinto Schuenck, Fabiana Gomes Ruas, José Aires Ventura, Paulo Roberto Filgueiras, Ricardo Machado Kuster
Industrial Crops and Products.2020; 143: 111430. CrossRef - Can an entomopathogenic nematode serve, as proxy for strongyles, in assessing the anthelmintic effects of phenolic compounds?
Serge Yan Landau, Velayudhan Satheeja Santhi, Itamar Glazer, Liora Salame, Hussein Muklada, Manal Haj-Zaroubi, Safaa Awwad, Alex Markovics, Hassan Azaizeh
Experimental Parasitology.2020; 209: 107811. CrossRef - Polyphenols of Honeybee Origin with Applications in Dental Medicine
Carmen Curuțiu, Lia Mara Dițu, Alexandru Mihai Grumezescu, Alina Maria Holban
Antibiotics.2020; 9(12): 856. CrossRef - Polyphenols Attenuate Highly-Glycosylated Haemoglobin-Induced Damage in Human Peritoneal Mesothelial Cells
Carolina Sánchez-Rodríguez, Concepción Peiró, Leocadio Rodríguez-Mañas, Julián Nevado
Antioxidants.2020; 9(7): 572. CrossRef - IN VITRO ANTIMICROBIAL ACTIVITY OF NATURAL SUBSTANCES CONVENIENT FOR USE IN ANIMAL BREEDING INSTEAD OF ANTIBIOTICS
Rudolf Kukla, Jaroslava Mazurova, Ilona Krovakova, Eva Slehova, Radek Sleha, Miroslav Rozkot, Lubomir Opletal
Military Medical Science Letters.2020; 89(1): 2. CrossRef - In vitro activities of Acacia nilotica (L.) Delile bark fractions against Oral Bacteria, Glucosyltransferase and as antioxidant
Ali Mahmoud Muddathir, Ebtihal Abdalla M. Mohieldin, Tohru Mitsunaga
BMC Complementary Medicine and Therapies.2020;[Epub] CrossRef - Epigallocatechin gallate and gallic acid affect colonization of abiotic surfaces by oral bacteria
Yi Wang, Antonia T.W. Lam
Archives of Oral Biology.2020; 120: 104922. CrossRef - Evaluation of the pharmacokinetic-pharmacodynamic integration of marbofloxacin in combination with methyl gallate against Salmonella Typhimurium in rats
Biruk Tesfaye Birhanu, Eon-Bee Lee, Seung-Chun Park, Praveen Rishi
PLOS ONE.2020; 15(6): e0234211. CrossRef - Nickel‐Based Metal‐Organic Framework/Crosslinked Tubular Poly(3,4‐ethylenedioxythiophene) Composite as an Electrocatalyst for the Detection of Gallic Acid and Tinidazole
Haixu Wang, Xiaogeng Feng, Xiangjie Bo, Ming Zhou, Liping Guo
ChemElectroChem.2020; 7(19): 4031. CrossRef - Anticariogenic activity of Nelumbo nucifera leaf extract in oral healthcare
Haeng-Eun Lee, Man-Seok Han, Seoul-Hee Nam, Jungsoo Han
Technology and Health Care.2019; 27(5): 487. CrossRef - Optimization of antibacterial extract from lacquer tree (Rhus verniciflua Stokes) using response surface methodology and its efficacy in controlling edwardsiellosis of olive flounder (Paralichthys olivaceus)
Jae-Woong Lim, Su-Mi Shin, Sung-Ju Jung, Mi Kyeong Lee, So Young Kang
Aquaculture.2019; 502: 40. CrossRef - Inactivation of Alpha-2-Macroglobulin by Photo-Illuminated Gallic Acid
Tooba Siddiqui, Mohammad Khalid Zia, Syed Saqib Ali, Haseeb Ahsan, Fahim Halim Khan
Journal of Fluorescence.2019; 29(4): 969. CrossRef - The Modern Use of an Ancient Plant: Exploring the Antioxidant and Nutraceutical Potential of the Maltese Mushroom (Cynomorium Coccineum L.)
Paolo Zucca, Sidonie Bellot, Antonio Rescigno
Antioxidants.2019; 8(8): 289. CrossRef - Gallic acid‐loaded electrospun cellulose acetate nanofibers as potential wound dressing materials
Patcharaporn Wutticharoenmongkol, Pornchita Hannirojram, Pimchanok Nuthong
Polymers for Advanced Technologies.2019; 30(4): 1135. CrossRef - Interaction of Bovine Serum Albumin with Propyl Gallate and Methyl Gallate Investigated by Fluorescence Spectroscopy
Seong‐June Lee, Han‐Gook Cho, Byeong‐Seo Cheong
Bulletin of the Korean Chemical Society.2019; 40(4): 344. CrossRef - Metal nanoparticles synthesis through natural phenolic acids
Seyed Mohammad Amini, Abolfazl Akbari
IET Nanobiotechnology.2019; 13(8): 771. CrossRef - Reshaped as polyester-based nanoparticles, gallic acid inhibits platelet aggregation, reactive oxygen species production and multi-resistant Gram-positive bacteria with an efficiency never obtained
Silvana Alfei, Maria Grazia Signorello, Anna Schito, Silvia Catena, Federica Turrini
Nanoscale Advances.2019; 1(10): 4148. CrossRef - Persulfated flavonoids accelerated re-endothelialization and improved blood compatibility for vascular medical implants
Tarek M. Bedair, Hanan M. Bedair, Kyoung-Won Ko, Wooram Park, Yoon Ki Joung, Dong Keun Han
Colloids and Surfaces B: Biointerfaces.2019; 181: 174. CrossRef - Galla chinensisextracts and calcium induce remineralization and antibacterial effects of enamel in aStreptococcus mutansbiofilm model
Eun-Jeong Kim, Bo-Hyoung Jin
Journal of Korean Academy of Oral Health.2018; 42(3): 90. CrossRef - Transcriptome analysis reveals GA induced apoptosis in HCT116 human colon cancer cells through calcium and p53 signal pathways
Chen Yang, Xiaoyu Xie, Hu Tang, Xuyan Dong, Xiaodong Zhang, Fenghong Huang
RSC Advances.2018; 8(22): 12449. CrossRef - Antimicrobial and Cytotoxic Activity of Dihydrobenzofuran Neolignans
Murilo J. Fukui, Herbert J. Dias, Marcela E. Severiano, Maria G. M. de Souza, Pollyanna F. de Oliveira, Sérgio R. Ambrósio, Carlos H. G. Martins, Denise C. Tavares, Antônio E. M. Crotti
ChemistrySelect.2018; 3(6): 1836. CrossRef - In Vitro Anthelmintic Activity of Methanolic Extract from Caesalpinia coriaria J. Willd Fruits against Haemonchus contortus Eggs and Infective Larvae
X. De Jesús-Martínez, A. Olmedo-Juárez, J. Olivares-Pérez, A. Zamilpa, P. Mendoza de Gives, M. E. López-Arellano, S. Rojas-Hernández, A. Villa-Mancera, L. M. Camacho-Díaz, M. Cipriano-Salazar
BioMed Research International.2018; 2018: 1. CrossRef - Inhibiting foodborne pathogens Vibrio parahaemolyticus and Listeria monocytogenes using extracts from traditional medicine: Chinese gallnut, pomegranate peel, Baikal skullcap root and forsythia fruit
Jian Wu, Katheryn M. Goodrich, Joseph D. Eifert, Michael L. Jahncke, Sean F. O’Keefe, Gregory E. Welbaum, Andrew P. Neilson
Open Agriculture.2018; 3(1): 163. CrossRef - Bioactivities of Phenolics by Focusing on Suppression of Chronic Diseases: A Review
Fereidoon Shahidi, JuDong Yeo
International Journal of Molecular Sciences.2018; 19(6): 1573. CrossRef - Effects of gallic acid on signaling kinases in murine macrophages and immune modulation against Brucella abortus 544 infection in mice
Alisha Wehdnesday Bernardo Reyes, Lauren Togonon Arayan, Huynh Tan Hop, Tran Xuan Ngoc Huy, Son Hai Vu, WonGi Min, Hu Jang Lee, Suk Kim
Microbial Pathogenesis.2018; 119: 255. CrossRef - Evaluation of phytotoxic activity of leaf and stem extracts and identification of a phytotoxic substance from Caesalpinia mimosoides Lamk.
Sutjaritpan Boonmee, Arihiro Iwasaki, Kiyotake Suenaga, Hisashi Kato-Noguchi
Theoretical and Experimental Plant Physiology.2018; 30(2): 129. CrossRef - Production of phenolic compounds and biosugars from flower resources via several extraction processes
Ly Thi Phi Trinh, Yong-Soo Choi, Hyeun-Jong Bae
Industrial Crops and Products.2018; 125: 261. CrossRef - Neuroprotective effects of paeoniflorin in neurodegenerative diseases of the central nervous system
Azadeh Manayi, Sahar Omidpanah, Davide Barreca, Silvana Ficarra, Maria Daglia, Seyed Fazel Nabavi, Seyed Mohammad Nabavi
Phytochemistry Reviews.2017; 16(6): 1173. CrossRef - The specific anti-biofilm effect of gallic acid on Staphylococcus aureus by regulating the expression of the ica operon
Meihui Liu, Xiaoxia Wu, Jianke Li, Liu Liu, Runguang Zhang, Dongyan Shao, Xiaodan Du
Food Control.2017; 73: 613. CrossRef - Inhibitory capacity of Rhus coriaria L. extract and its major component methyl gallate on Streptococcus mutans biofilm formation by optical profilometry: Potential applications for oral health
Tomas Kacergius, Saleh Abu-Lafi, Agne Kirkliauskiene, Vika Gabe, Azmi Adawi, Mahmoud Rayan, Mutaz Qutob, Rimantas Stukas, Algirdas Utkus, Mouhammad Zeidan, Anwar Rayan
Molecular Medicine Reports.2017; 16(1): 949. CrossRef - α-Farnesene and ocimene induce metabolite changes by volatile signaling in neighboring tea ( Camellia sinensis ) plants
Lanting Zeng, Yinyin Liao, Jianlong Li, Ying Zhou, Jinchi Tang, Fang Dong, Ziyin Yang
Plant Science.2017; 264: 29. CrossRef - Antimicrobial effect ofPrunus mumeextracts against cariogenic bacteria
Jung-Sun Lee, Ki-Ho Chung
Journal of Korean Academy of Oral Health.2017; 41(1): 65. CrossRef - Marsdenia tenacissima extract suppresses tumor growth and angiogenesis in A20 mouse lymphoma
Xingbin Dai, Yanhua Ji, Pengjun Jiang, Xuemei Sun
Oncology Letters.2017; 13(5): 2897. CrossRef - Gallic acid inhibits the growth of calf pulmonary arterial endothelial cells through cell death and glutathione depletion
Woo Hyun Park
Molecular Medicine Reports.2017; 16(5): 7805. CrossRef - Protective effect of Gallic acid on doxorubicin-induced testicular and epididymal toxicity
M.J. Olusoji, O. M. Oyeyemi, E. R. Asenuga, T. O. Omobowale, O. L. Ajayi, A. A. Oyagbemi
Andrologia.2017; 49(4): e12635. CrossRef - Derivatives of alkyl gallate triphenylphosphonium exhibit antitumor activity in a syngeneic murine model of mammary adenocarcinoma
Liliana Peredo-Silva, Sebastián Fuentes-Retamal, Cristian Sandoval-Acuña, Mario Pavani, Juan D. Maya, Vicente Castro-Castillo, Matías Madrid-Rojas, Solange Rebolledo, Ulrike Kemmerling, Eduardo Parra, Jorge Ferreira
Toxicology and Applied Pharmacology.2017; 329: 334. CrossRef - Gallic acid induces G1 phase arrest and apoptosis of triple-negative breast cancer cell MDA-MB-231 via p38 mitogen-activated protein kinase/p21/p27 axis
Hsiang-Lin Lee, Chun-Shiang Lin, Shao-Hsuan Kao, Ming-Chih Chou
Anti-Cancer Drugs.2017; 28(10): 1150. CrossRef - Gallic acid induces HeLa cell death via increasing GSH depletion rather than ROS levels
Woo Hyun Park
Oncology Reports.2017; 37(2): 1277. CrossRef - Octyl gallate, a food additive with potential beneficial properties to treat Helicobacter pylori infection
Vanessa Gonçalves Wolf, Cibele Bonacorsi, Maria Stella Gonçalves Raddi, Luiz Marcos da Fonseca, Valdecir Farias Ximenes
Food & Function.2017; 8(7): 2500. CrossRef - The Effect of Pelargonium endlicherianum Fenzl. root extracts on formation of nanoparticles and their antimicrobial activities
Gökçe Şeker Karatoprak, Gamze Aydin, Berrak Altinsoy, Cevahir Altinkaynak, Müberra Koşar, Ismail Ocsoy
Enzyme and Microbial Technology.2017; 97: 21. CrossRef - Crystal structure dependent in vitro antioxidant activity of biocompatible calcium gallate MOFs
Tania Hidalgo, Lucy Cooper, Martin Gorman, Tamara Lozano-Fernández, Rosana Simón-Vázquez, Georges Mouchaham, Jérome Marrot, Nathalie Guillou, Christian Serre, Pierre Fertey, África González-Fernández, Thomas Devic, Patricia Horcajada
Journal of Materials Chemistry B.2017; 5(15): 2813. CrossRef - Fluorescein isothiocyanate‐dyed mesoporous silica nanoparticles for tracking antioxidant delivery
Ladan Rashidi, Fariba Ganji, Ebrahim Vasheghani‐Farahani
IET Nanobiotechnology.2017; 11(4): 454. CrossRef - Recent advances to accelerate re-endothelialization for vascular stents
Tarek M Bedair, Mahmoud A ElNaggar, Yoon Ki Joung, Dong Keun Han
Journal of Tissue Engineering.2017;[Epub] CrossRef - On mechanism behind UV-A light enhanced antibacterial activity of gallic acid and propyl gallate against Escherichia coli O157:H7
Qingyang Wang, Erick Falcao de Oliveira, Solmaz Alborzi, Luis J. Bastarrachea, Rohan V. Tikekar
Scientific Reports.2017;[Epub] CrossRef - Biofilms as “Connectors” for Oral and Systems Medicine: A New Opportunity for Biomarkers, Molecular Targets, and Bacterial Eradication
Herman O. Sintim, Ulvi Kahraman Gürsoy
OMICS: A Journal of Integrative Biology.2016; 20(1): 3. CrossRef - Insoluble-Bound Phenolics in Food
Fereidoon Shahidi, JuDong Yeo
Molecules.2016; 21(9): 1216. CrossRef - Use of organic acids for prevention and removal of Bacillus subtilis biofilms on food contact surfaces
Meltem Yesilcimen Akbas, Seyda Cag
Food Science and Technology International.2016; 22(7): 587. CrossRef - Gallic acid as a selective anticancer agent that induces apoptosis in SMMC-7721 human hepatocellular carcinoma cells
GUOJUN SUN, SHUQIN ZHANG, YANRU XIE, ZIYU ZHANG, WENJING ZHAO
Oncology Letters.2016; 11(1): 150. CrossRef - Gallic acid induces apoptosis in EGFR-mutant non-small cell lung cancers by accelerating EGFR turnover
Boas Nam, Jin Kyung Rho, Dong-Myung Shin, Jaekyoung Son
Bioorganic & Medicinal Chemistry Letters.2016; 26(19): 4571. CrossRef - Improving succinic acid production by Actinobacillus succinogenes from raw industrial carob pods
Margarida Carvalho, Christophe Roca, Maria A.M. Reis
Bioresource Technology.2016; 218: 491. CrossRef - Skin penetration and antioxidant effect of cosmeto-textiles with gallic acid
C. Alonso, M. Martí, C. Barba, M. Lis, L. Rubio, L. Coderch
Journal of Photochemistry and Photobiology B: Biology.2016; 156: 50. CrossRef - Complexation and molecular modeling studies of europium(III)–gallic acid–amino acid complexes
Mohamed Taha, Imran Khan, João A.P. Coutinho
Journal of Inorganic Biochemistry.2016; 157: 25. CrossRef - Galla chinensis Compounds Remineralize Enamel Caries Lesions in a Rat Model
Tie-Ting Zhang, Hui-Jing Guo, Xue-Jun Liu, Jin-Pu Chu, Xue-Dong Zhou
Caries Research.2016; 50(2): 159. CrossRef - Single-molecule interaction force measurements of catechol analog monomers and synthesis of adhesive polymer using the results
Shougo Kinugawa, Siqian Wang, Shu Taira, Akihiko Tsuge, Daisaku Kaneko
Polymer Journal.2016; 48(6): 715. CrossRef - Antioxidant activities of novel galloyl phytosterols evaluated by human erythrocytes with the aid of confocal microscopy imaging
Songbai Liu, Huiying Hu, Cheng Li
Journal of Functional Foods.2016; 22: 224. CrossRef - Effects of aluminum oxide (Al2O3) nanoparticles on ECG, myocardial inflammatory cytokines, redox state, and connexin 43 and lipid profile in rats: possible cardioprotective effect of gallic acid
El-Hussainy M.A. El-Hussainy, Abdelaziz M. Hussein, Azza Abdel-Aziz, Ibrahim El-Mehasseb
Canadian Journal of Physiology and Pharmacology.2016; 94(8): 868. CrossRef - Identification of gallic acid based glycoconjugates as a novel tubulin polymerization inhibitors
Kapil Upadhyaya, Hamidullah Hamidullah, Kartikey Singh, Ashutosh Arun, Mahendra Shukla, Neetika Srivastava, Raghib Ashraf, Abhisheak Sharma, Rohit Mahar, Sanjeev K. Shukla, Jayanta Sarkar, Ravishankar Ramachandran, Jawahar Lal, Rituraj Konwar, Rama Pati T
Organic & Biomolecular Chemistry.2016; 14(4): 1338. CrossRef - Molecular Mechanisms of Inhibition of Streptococcus Species by Phytochemicals
Soheila Abachi, Song Lee, H. Rupasinghe
Molecules.2016; 21(2): 215. CrossRef - Gallic acid grafting effect on delivery performance and antiglaucoma efficacy of antioxidant-functionalized intracameral pilocarpine carriers
Shih-Feng Chou, Li-Jyuan Luo, Jui-Yang Lai
Acta Biomaterialia.2016; 38: 116. CrossRef - Plant Natural Products Targeting Bacterial Virulence Factors
Laura Nunes Silva, Karine Rigon Zimmer, Alexandre José Macedo, Danielle Silva Trentin
Chemical Reviews.2016; 116(16): 9162. CrossRef - Antibiofilm Activity of Plant Polyphenols
Lívia Slobodníková, Silvia Fialová, Katarína Rendeková, Ján Kováč, Pavel Mučaji
Molecules.2016; 21(12): 1717. CrossRef - Methyl gallate limits infection in mice challenged with Brucella abortus
while enhancing the inflammatory response
A.W.B. Reyes, D.G. Kim, H.L.T. Simborio, H.T. Hop, L.T. Arayan, W. Min, J.J. Lee, H.H. Chang, S. Kim
Journal of Applied Microbiology.2016; 120(3): 552. CrossRef - Identification and partial purification of antibacterial compounds againstStreptococcus mutansfromGalla Rhois
Ae-Ri Shin, Seung-Ho Ohk, Choong-Ho Choi, Suk-Jin Hong
Journal of Korean Academy of Oral Health.2016; 40(1): 3. CrossRef - Co-Metabolic Degradation of β-Cypermethrin and 3-Phenoxybenzoic Acid by Co-Culture of Bacillus licheniformis B-1 and Aspergillus oryzae M-4
Jiayuan Zhao, Yuanlong Chi, Yingchao Xu, Dongying Jia, Kai Yao, Pankaj Kumar Arora
PLOS ONE.2016; 11(11): e0166796. CrossRef - Green synthesis of gold and silver nanoparticles using gallic acid: catalytic activity and conversion yield toward the 4-nitrophenol reduction reaction
Jisu Park, Song-Hyun Cha, Seonho Cho, Youmie Park
Journal of Nanoparticle Research.2016;[Epub] CrossRef - Characterization of the bioactive constituents of Nymphaea alba rhizomes and evaluation of anti-biofilm as well as antioxidant and cytotoxic properties
Omar Bakr Riham, Wasfi Reham, Swilam Noha, Ezz Sallam Ibrahim
Journal of Medicinal Plants Research.2016; 10(26): 390. CrossRef - Selected dietary (poly)phenols inhibit periodontal pathogen growth and biofilm formation
Muhammad Shahzad, Emma Millhouse, Shauna Culshaw, Christine A. Edwards, Gordon Ramage, Emilie Combet
Food & Function.2015; 6(3): 719. CrossRef - Commercial Lawsonia inermis L. dried leaves and processed powder: Phytochemical composition, antioxidant, antibacterial, and allelopathic activities
Karima Dhaouadi, Walid Meliti, Sana Dallali, Manel Belkhir, Saloua Ouerghemmi, Houcine Sebei, Sami Fattouch
Industrial Crops and Products.2015; 77: 544. CrossRef - Bioavailability of Dietary Polyphenols and Gut Microbiota Metabolism: Antimicrobial Properties
Laura Marín, Elisa M. Miguélez, Claudio J. Villar, Felipe Lombó
BioMed Research International.2015; 2015: 1. CrossRef - Use of natural substances for boar semen decontamination
J. Mazurova, R. Kukla, M. Rozkot, A. Lustykova, E. Slehova, R. Sleha, J. Lipensky, L. Opletal
Veterinární medicína.2015; 60(5): 235. CrossRef - Green synthesis of gallic acid-coated silver nanoparticles with high antimicrobial activity and low cytotoxicity to normal cells
Dan Li, Zuojia Liu, Ye Yuan, Yawen Liu, Fenglan Niu
Process Biochemistry.2015; 50(3): 357. CrossRef - Dietary Polyphenols in Prevention and Treatment of Prostate Cancer
Rahul Lall, Deeba Syed, Vaqar Adhami, Mohammad Khan, Hasan Mukhtar
International Journal of Molecular Sciences.2015; 16(2): 3350. CrossRef - Anti-carious Effects ofGalla chinensis: A Systematic Review
Tieting Zhang, Jinpu Chu, Xuedong Zhou
Phytotherapy Research.2015; 29(12): 1837. CrossRef - Optimization of metronidazole sustained-release films using D-optimal design
Jomjai Peerapattana, Teeraphat Ngamsupsiri, Nopadol Cheucharoenvasuchai, Charnnarong Saikaew
International Journal of Pharmaceutics.2015; 484(1-2): 1. CrossRef - Isolation and characterization of gallic acid and methyl gallate from the seed coats of Givotia rottleriformis Griff. and their anti-proliferative effect on human epidermoid carcinoma A431 cells
Samuel Kamatham, Naresh Kumar, Padmaja Gudipalli
Toxicology Reports.2015; 2: 520. CrossRef - Synthesis, Antiproliferative Activity and Molecular Properties Predictions of Galloyl Derivatives
Marciane Maximo da Silva, Marina Comin, Thiago Santos Duarte, Mary Foglio, João De Carvalho, Maria Do Carmo Vieira, Anelise Nazari Formagio
Molecules.2015; 20(4): 5360. CrossRef - Molecular adaptation of Lactobacillus plantarum WCFS1 to gallic acid revealed by genome-scale transcriptomic signature and physiological analysis
Inés Reverón, Blanca de las Rivas, Ruth Matesanz, Rosario Muñoz, Félix López de Felipe
Microbial Cell Factories.2015;[Epub] CrossRef - Inhibition of Gallic Acid on the Growth and Biofilm Formation of Escherichia coli and Streptococcus mutans
Dongyan Shao, Jing Li, Ji Li, Ruihua Tang, Liu Liu, Junling Shi, Qingsheng Huang, Hui Yang
Journal of Food Science.2015;[Epub] CrossRef - Phenolic Compounds from Liquidambar formosana Fruits as Monoamine Oxidase Inhibitors
Zhong-duo Yang, Ji-bei Liang, Wei-Wei Xue, Jie Sheng, Yin Shi, Xiao-Jun Yao, Jin Ren, Lian Liu
Chemistry of Natural Compounds.2014; 50(6): 1118. CrossRef - Design and straightforward synthesis of novel galloyl phytosterols with excellent antioxidant activity
Yuanqing Fu, Yan Zhang, Huiying Hu, Ying Chen, Rong Wang, Duo Li, Songbai Liu
Food Chemistry.2014; 163: 171. CrossRef - Polyphenol-rich extract of Nelumbo nucifera leaves inhibits alcohol-induced steatohepatitis via reducing hepatic lipid accumulation and anti-inflammation in C57BL/6J mice
Chang-Chieh Tang, Wea-Lung Lin, Yi-Ju Lee, Yu-Chi Tang, Chau-Jong Wang
Food & Function.2014; 5(4): 678. CrossRef - Isolation and characterization of antimicrobial compounds from Terminalia phanerophlebia Engl. & Diels leaf extracts
B. Madikizela, M.A. Aderogba, J.F. Finnie, J. Van Staden
Journal of Ethnopharmacology.2014; 156: 228. CrossRef - Sucrose supplementation during traditional carob syrup processing affected its chemical characteristics and biological activities
Karima Dhaouadi, Manel Belkhir, Ismail Akinocho, Faten Raboudi, David Pamies, Enrique Barrajón, Carmen Estevan, Sami Fattouch
LWT - Food Science and Technology.2014; 57(1): 1. CrossRef - Antimicrobial Activity of Antrodia camphorata Extracts against Oral Bacteria
Hsiu-Man Lien, Chin-Jui Tseng, Chao-Lu Huang, Yu-Ting Lin, Chia-Chang Chen, Ya-Yun Lai, Yuan-Soon Ho
PLoS ONE.2014; 9(8): e105286. CrossRef - Inhibitory effect of the carnosine-gallic acid synthetic peptide on MMP-2 and MMP-9 in human fibrosarcoma HT1080 cells
Sung-Rae Kim, Tae-Kil Eom, Hee-Guk Byun
Journal of Peptide Science.2014; 20(9): 716. CrossRef - Topical application of Gallic acid suppresses the 7,12-DMBA/Croton oil induced two-step skin carcinogenesis by modulating anti-oxidants and MMP-2/MMP-9 in Swiss albino mice
Vimala Subramanian, Balaji Venkatesan, Anusha Tumala, Elangovan Vellaichamy
Food and Chemical Toxicology.2014; 66: 44. CrossRef - Gallic Acid Tailoring Surface Functionalities of Plasma-Polymerized Allylamine-Coated 316L SS to Selectively Direct Vascular Endothelial and Smooth Muscle Cell Fate for Enhanced Endothelialization
Zhilu Yang, Kaiqin Xiong, Pengkai Qi, Ying Yang, Qiufen Tu, Jin Wang, Nan Huang
ACS Applied Materials & Interfaces.2014; 6(4): 2647. CrossRef - Antibacterial mechanisms of methyl gallate against Ralstonia solanacearum
Wan-Wan Fan, Gao-Qing Yuan, Qi-Qin Li, Wei Lin
Australasian Plant Pathology.2014; 43(1): 1. CrossRef - Antiadherent activity of Schinus terebinthifolius and Croton urucurana extracts on in vitro biofilm formation of Candida albicans and Streptococcus mutans
Dicler S.V. Barbieri, Fabiana Tonial, Patricia V.A. Lopez, Beatriz H.L.N. Sales Maia, Germana D. Santos, Marina O. Ribas, Chirlei Glienke, Vania A. Vicente
Archives of Oral Biology.2014; 59(9): 887. CrossRef - Antibacterial and Antidiarrheal Activities of Plant Products against Enterotoxinogenic Escherichia coli
J. Dubreuil
Toxins.2013; 5(11): 2009. CrossRef - Anti-Depressant Like Effect of Methyl Gallate Isolated fromAcer barbinervein Mice
Jin-Koo Lee
The Korean Journal of Physiology & Pharmacology.2013; 17(5): 441. CrossRef - Gallic acid provokes DNA damage and suppresses DNA repair gene expression in human prostate cancer PC‐3 cells
Kuo‐Ching Liu, Heng‐Chien Ho, An‐Cheng Huang, Bin‐Chuan Ji, Hui‐Yi Lin, Fu‐Shin Chueh, Jai‐Sing Yang, Chi‐Cheng Lu, Jo‐Hua Chiang, Menghsiao Meng, Jing‐Gung Chung
Environmental Toxicology.2013; 28(10): 579. CrossRef - Antibacterial Effects of Galla Rhois Extract against Streptococcus suis Infection in Mice
Chun-Nam Cha, Eun-Ah Yu, Eun-Kee Park, Hyunju Choi, Suk Kim, Hu Jang Lee
Journal of Food Hygiene and Safety.2013; 28(2): 95. CrossRef - Effect of Gallotannins Derived from Sedum takesimense on Tomato Bacterial Wilt
Thuy Thu Vu, Jin-Cheol Kim, Yong Ho Choi, Gyung Ja Choi, Kyoung Soo Jang, Tae Ho Choi, Tae Mi Yoon, Seon-Woo Lee
Plant Disease.2013; 97(12): 1593. CrossRef - Catechin-incorporated dental copolymers inhibit growth of Streptococcus mutans
Alexandra Mankovskaia, Celine M. Levesque, Anuradha Prakki
Journal of Applied Oral Science.2013; 21(2): 203. CrossRef - MAPK inhibitors augment gallic acid-induced A549 lung cancer cell death through the enhancement of glutathione depletion
WOO HYUN PARK, SUHN HEE KIM
Oncology Reports.2013; 30(1): 513. CrossRef - Biomimetic Formation of Pd and Au-Pd Nanocomposites and their Catalytic Applications
Nazmul H. Sarker, Stacey N. Barnaby, Aaron P. Dowdell, Nako Nakatsuka, Ipsita A. Banerjee
Soft Materials.2013; 11(4): 403. CrossRef - Construction of Polyfunctional Coatings Assisted by Gallic Acid to Facilitate Co-Immobilization of Diverse Biomolecules
Zhilu Yang, Ying Yang, Wei Yan, Qiufen Tu, Jin Wang, Nan Huang
ACS Applied Materials & Interfaces.2013; 5(21): 10495. CrossRef - Antitumor activity of methyl gallate by inhibition of focal adhesion formation and Akt phosphorylation in glioma cells
Sang-Hyun Lee, Jin Kyu Kim, Dae Won Kim, Hyun Sook Hwang, Won Sik Eum, Jinseu Park, Kyu Hyung Han, Joa Sub Oh, Soo Young Choi
Biochimica et Biophysica Acta (BBA) - General Subjects.2013; 1830(8): 4017. CrossRef - Antimetastatic activity and low systemic toxicity of tetradecyl gallate in a preclinical melanoma mouse model
Claudriana Locatelli, Deborah Regina Carvalho, Alessandra Mascarello, Clarissa Amorin Silva de Cordova, Rosendo Augusto Yunes, Ricardo Jose Nunes, Celso Pilati, Tânia Beatriz Creczynski-Pasa
Investigational New Drugs.2012; 30(3): 870. CrossRef - Chemical composition of Galla chinensis extract and the effect of its main component(s) on the prevention of enamel demineralization in vitro
Xue-Lian Huang, Ming-Dong Liu, Ji-Yao Li, Xue-Dong Zhou, Jacob M ten Cate
International Journal of Oral Science.2012; 4(3): 146. CrossRef - Anticoccidial effect of supplemental dietaryGalla Rhoisagainst infection withEimeria tenellain chickens
Jin Ju Lee, Dong Hyeok Kim, Jeong Ju Lim, Dae Geun Kim, Wongi Min, Gon Sup Kim, Hu Jang Lee, Man Hee Rhee, Hyun Park, Sam Churl Kim, Hong Hee Chang, Suk Kim
Avian Pathology.2012; 41(4): 403. CrossRef - In Vitro Antibacterial Activity of Galls ofQuercus infectoriaOlivier against Oral Pathogens
Dayang Fredalina Basri, Liy Si Tan, Zaleha Shafiei, Noraziah Mohamad Zin
Evidence-Based Complementary and Alternative Medicine.2012; 2012: 1. CrossRef - Involvement of reactive oxygen species and glutathione in gallic acid-induced human umbilical vein endothelial cell death
WOO HYUN PARK, SUHN HEE KIM
Oncology Reports.2012; 28(2): 695. CrossRef - Gallic acid inhibits migration and invasion in human osteosarcoma U-2 OS cells through suppressing the matrix metalloproteinase-2/-9, protein kinase B (PKB) and PKC signaling pathways
Ching-Lung Liao, Kuang-Chi Lai, An-Cheng Huang, Jai-Sing Yang, Jen-Jyh Lin, Shin-Hwar Wu, W. Gibson Wood, Jaung-Geng Lin, Jing-Gung Chung
Food and Chemical Toxicology.2012; 50(5): 1734. CrossRef - Gallic acid downregulates matrix metalloproteinase‐2 (MMP‐2) and MMP‐9 in human leukemia cells with expressed Bcr/Abl
Ying‐Jung Chen, Long‐Sen Chang
Molecular Nutrition & Food Research.2012; 56(9): 1398. CrossRef - New hybrid materials based on layered double hydroxides and antioxidant compounds. Preparation, characterization and release kinetic studies
Mihaela Silion, Doina Hritcu, Gabriela Lisa, Marcel Ionel Popa
Journal of Porous Materials.2012; 19(3): 267. CrossRef - The activity of ferulic and gallic acids in biofilm prevention and control of pathogenic bacteria
Anabela Borges, Maria J. Saavedra, Manuel Simões
Biofouling.2012; 28(7): 755. CrossRef - Biomimetic growth of gallic acid–ZnO hybrid assemblies and their applications
Nazmul H. Sarker, Stacey N. Barnaby, Karl R. Fath, Stephen H. Frayne, Nako Nakatsuka, Ipsita A. Banerjee
Journal of Nanoparticle Research.2012;[Epub] CrossRef - Inhibitory Effects of Chinese Medicinal Herbs on Plant-Pathogenic Bacteria and Identification of the Active Components from Gallnuts of Chinese Sumac
C. T. Feng, H. J. Su, C. T. Chen, W. C. Ho, Y. R. Tsou, L. L. Chern
Plant Disease.2012; 96(8): 1193. CrossRef - Effectiveness of egg yolk immunoglobulin (IgY) against periodontal disease-causing Fusobacterium nucleatum
F.X. Xu, Y.P. Xu, L.J. Jin, H. Liu, L.H. Wang, J.S. You, S.Y. Li, X.Y. Li
Journal of Applied Microbiology.2012; 113(4): 983. CrossRef - Enhancement of gallic acid-induced human pulmonary fibroblast cell death by N-acetyl cysteine and L-buthionine sulfoximine
Bo Ra You, Woo Hyun Park
Human & Experimental Toxicology.2011; 30(8): 992. CrossRef - The Effects of Mitogen-Activated Protein Kinase Inhibitors or Small Interfering RNAs on Gallic Acid-Induced HeLa Cell Death in Relation to Reactive Oxygen Species and Glutathione
Bo Ra You, Woo Hyun Park
Journal of Agricultural and Food Chemistry.2011; 59(2): 763. CrossRef - Surface modified dendrimers: Synthesis and characterization for cancer targeted drug delivery
Anupama Sharma, Surya Prakash Gautam, Arun Kumar Gupta
Bioorganic & Medicinal Chemistry.2011; 19(11): 3341. CrossRef - Identification and Quantification of Phenolic Compounds in Bambangan (Mangifera pajang Kort.) Peels and Their Free Radical Scavenging Activity
Fouad Abdulrahman Hassan, Amin Ismail, Azizah Abdulhamid, Azrina Azlan
Journal of Agricultural and Food Chemistry.2011; 59(17): 9102. CrossRef - Inhibition of Nitric Oxide Production by Ethyl Digallates Isolated from Galla Rhois in RAW 264.7 Macrophages
Pil-Hoon Park, Jin Hur, Dong-Sung Lee, Youn-Chul Kim, Gil-Saeng Jeong, Dong-Hwan Sohn
Biomolecules and Therapeutics.2011; 19(4): 419. CrossRef - Gallic acid-induced lung cancer cell death is accompanied by ROS increase and glutathione depletion
Bo Ra You, Sung Zoo Kim, Suhn Hee Kim, Woo Hyun Park
Molecular and Cellular Biochemistry.2011; 357(1-2): 295. CrossRef - Concentration of phenolic compounds in aqueous mate (Ilex paraguariensis A. St. Hil) extract through nanofiltration
Aureanna Nairne Negrão Murakami, Renata Dias de Mello Castanho Amboni, Elane Schwinden Prudêncio, Edna Regina Amante, Laura de Moraes Zanotta, Marcelo Maraschin, José Carlos Cunha Petrus, Reinaldo Francisco Teófilo
LWT - Food Science and Technology.2011; 44(10): 2211. CrossRef - Effect ofWeissella cibariaonFusobacterium nucleatum-induced Interleukin-6 and Interleukin-8 Production in KB Cells
Mi-Sun Kang, Hoi-Soon Lim, Seon-Mi Kim, Hyun-Chul Lee, Jong-Suk Oh
Journal of Bacteriology and Virology.2011; 41(1): 9. CrossRef - Gallic Acid Induces G2/M Phase Arrest of Breast Cancer Cell MCF-7 through Stabilization of p27Kip1 Attributed to Disruption of p27Kip1/Skp2 Complex
Jeng-Dong Hsu, Shao-Hsuan Kao, Ting-Tsz Ou, Yu-Jen Chen, Yi-Ju Li, Chau-Jong Wang
Journal of Agricultural and Food Chemistry.2011; 59(5): 1996. CrossRef - Gallic acid–induced human pulmonary fibroblast cell death is accompanied by increases in ROS level and GSH depletion
Bo Ra You, Woo Hyun Park
Drug and Chemical Toxicology.2011; 34(1): 38. CrossRef - Anticancer property of gallic acid in A549, a human lung adenocarcinoma cell line, and possible mechanisms
Dharmendra K. Maurya, Nivedita Nandakumar, Thomas Paul Asir Devasagayam
Journal of Clinical Biochemistry and Nutrition.2010; 48(1): 85. CrossRef - Cistaceae aqueous extracts containing ellagitannins show antioxidant and antimicrobial capacity, and cytotoxic activity against human cancer cells
Enrique Barrajón-Catalán, Salvador Fernández-Arroyo, Domingo Saura, Emilio Guillén, Alberto Fernández-Gutiérrez, Antonio Segura-Carretero, Vicente Micol
Food and Chemical Toxicology.2010; 48(8-9): 2273. CrossRef - Gallic acid inhibits the growth of HeLa cervical cancer cells via apoptosis and/or necrosis
Bo Ra You, Hwa Jin Moon, Yong Hwan Han, Woo Hyun Park
Food and Chemical Toxicology.2010; 48(5): 1334. CrossRef - Heme oxygenase-1 mediated protective effect of methyl gallate on cadmium-induced cytotoxicity in cultured mouse mesangial cells
Seok Ho Cha, Chang Kook Suh
Molecular & Cellular Toxicology.2010; 6(2): 127. CrossRef - Inhibitory Effect of Gallic Acid and Its Esters on 2,2′-Azobis(2-amidinopropane)hydrochloride (AAPH)-Induced Hemolysis and Depletion of Intracellular Glutathione in Erythrocytes
Valdecir F. Ximenes, Mariana G. Lopes, Maicon Segalla Petrônio, Luis Octavio Regasini, Dulce H. Siqueira Silva, Luiz M. da Fonseca
Journal of Agricultural and Food Chemistry.2010; 58(9): 5355. CrossRef - Gallic acid-induced lung cancer cell death is related to glutathione depletion as well as reactive oxygen species increase
Bo Ra You, Woo Hyun Park
Toxicology in Vitro.2010; 24(5): 1356. CrossRef - Rhus chinensisandGalla Chinensis– folklore to modern evidence: review
Odilon Djakpo, Weirong Yao
Phytotherapy Research.2010; 24(12): 1739. CrossRef - Effects of methyl gallate and gallic acid on the production of inflammatory mediators interleukin-6 and interleukin-8 by oral epithelial cells stimulated with Fusobacterium nucleatum
Mi-Sun Kang, Hee-Sook Jang, Jong-Suk Oh, Kyu-Ho Yang, Nam-Ki Choi, Hoi-Soon Lim, Seon-Mi Kim
The Journal of Microbiology.2009; 47(6): 760. CrossRef - Gallic Acid, an Active Constituent of Grape Seed Extract, Exhibits Anti-proliferative, Pro-apoptotic and Anti-tumorigenic Effects Against Prostate Carcinoma Xenograft Growth in Nude Mice
Manjinder Kaur, Balaiya Velmurugan, Subapriya Rajamanickam, Rajesh Agarwal, Chapla Agarwal
Pharmaceutical Research.2009; 26(9): 2133. CrossRef - Comparative pharmacokinetic study of paeoniflorin after oral administration of pure paeoniflorin, extract of Cortex Moutan and Shuang-Dan prescription to rats
Hao Wu, Zhenyu Zhu, Guoqing Zhang, Liang Zhao, Hai Zhang, Dongliang Zhu, Yifeng Chai
Journal of Ethnopharmacology.2009; 125(3): 444. CrossRef
Review
- REVIEW] Interaction of Candida albicans with host cells: virulence factors, host defense, escape strategies, and the microbiota
-
Sarah Höfs , Selene Mogavero , Bernhard Hube
-
J. Microbiol. 2016;54(3):149-169. Published online February 27, 2016
-
DOI: https://doi.org/10.1007/s12275-016-5514-0
-
-
47
View
-
0
Download
-
154
Crossref
-
Abstract
-
The interaction between Candida albicans and its host cells is
characterized by a complex interplay between the expression
of fungal virulence factors, which results in adherence, invasion
and cell damage, and the host immune system, which
responds by secreting proinflammatory cytokines, activating
antimicrobial activities and killing the fungal pathogen. In
this review we describe this interplay by taking a closer look
at how C. albicans pathogenicity is induced and executed,
how the host responds in order to prevent and clear an infection,
and which mechanisms C. albicans has evolved to
bypass these immune responses to avoid clearance. Furthermore,
we review studies that show how the presence of other
microorganisms affects this interplay.
-
Citations
Citations to this article as recorded by

Journal Article
- UBCG2: Up-to-date bacterial core genes and pipeline for phylogenomic analysis
-
Jihyeon Kim , Seong-In Na , Dongwook Kim , Jongsik Chun
-
J. Microbiol. 2021;59(6):609-615. Published online May 29, 2021
-
DOI: https://doi.org/10.1007/s12275-021-1231-4
-
-
56
View
-
0
Download
-
138
Web of Science
-
138
Crossref
-
Abstract
-
Phylogenomic tree reconstruction has recently become a
routine and critical task to elucidate the evolutionary relationships
among bacterial species. The most widely used method
utilizes the concatenated core genes, universally present in a
single-copy throughout the bacterial domain. In our previous
study, a bioinformatics pipeline termed Up-to-date Bacterial
Core Genes (UBCG) was developed with a set of bacterial core
genes selected from 1,429 species covering 28 phyla. In this
study, we revised a new bacterial core gene set, named UBCG2,
that was selected from the more extensive genome sequence
set belonging to 3,508 species spanning 43 phyla. UBCG2 comprises
81 genes with nine Clusters of Orthologous Groups of
proteins (COGs) functional categories. The new gene set and
complete pipeline are available at http://leb.snu.ac.kr/ubcg2.
-
Citations
Citations to this article as recorded by

- Proposal of Lactococcus intestinalis Sun et al. 2024 as a Later Heterotypic Synonym of Lactococcus muris Afrizal et al. 2023
Xin-Yu Zhu, Chun Tao Gu
Current Microbiology.2025;[Epub] CrossRef - Streptomyces yaizuensis sp. nov., a berninamycin C-producing actinomycete isolated from sponge
Miku Takahashi, Kanata Hoshino, Moriyuki Hamada, Tomohiko Tamura, Ryota Moriuchi, Hideo Dohra, Youji Nakagawa, Susumu Kokubo, Motoyuki Yamazaki, Hiroyuki Nakagawa, Masayuki Hayakawa, Shinya Kodani, Hideki Yamamura
The Journal of Antibiotics.2025; 78(1): 35. CrossRef - Description and genomic characterization of Mangrovibrevibacter kandeliae gen. nov. sp. nov., a novel carotenoid-producing endophytic bacterium isolated from branch of mangrove plants
Chengshao Zan, Zhouqing Zheng, Xiaohui Chen, Mingsheng Chen, Feina Li, Li Tuo
Antonie van Leeuwenhoek.2025;[Epub] CrossRef - Parasalinivibrio latis gen. nov., sp. nov., isolated from the distal gut of healthy farmed Asian Seabass (Lates calcarifer)
Shuan Er, Melissa Soh, Adrian Low, Henning Seedorf
Antonie van Leeuwenhoek.2025;[Epub] CrossRef - Phenotypic and Complete Reference Whole Genome Sequence Analyses of Two Paenibacillus spp. Isolates from a Gray Wolf (Canis lupus) Gastrointestinal Tract
Jessika L. Bryant, Jennifer McCabe, C. Cristoph Klews, MiCayla Johnson, Ariel N. Atchley, Thomas W. Cousins, Maya Barnard-Davidson, Kristina M. Smith, Mark R. Ackermann, Michael Netherland, Nur A. Hasan, Peter A. Jordan, Evan S. Forsythe, Patrick N. Ball,
Veterinary Sciences.2025; 12(1): 51. CrossRef -
Flavobacterium magnesitis sp. nov. and Flavobacterium zubiriense sp. nov., two novel Flavobacterium species isolated from alkaline magnesite residues
Leonor Matos, Lorrie Maccarrio, Ana Paula Chung, Diogo N. Proença, Søren Sørensen, Paula V. Morais, Romeu Francisco
International Journal of Systematic and Evolutionary Microbiology
.2025;[Epub] CrossRef -
Ascidiimonas meishanensis sp. nov. and Leptobacterium meishanense sp. nov., two bacteria isolated from marine sediment in the East China Sea
Hao Wang, Huiting Wang, Xinyu Liu, Dawoon Jung, Eun-Young Seo, Shan He, Weiyan Zhang, Lijian Ding
International Journal of Systematic and Evolutionary Microbiology
.2025;[Epub] CrossRef - Paenibacillus mesotrionivorans sp. nov., a Mesotrione-Degrading Strain Isolated from Soil
Ye Song, Yan Wu, Leyao Chen, Luyao Ruan, Minglai Wan, Bin Liu, Jian He, Baolong Zhang
Current Microbiology.2025;[Epub] CrossRef - Genomic and phenotypic characterisation of Leeuwenhoekiella obamensis sp. nov., a novel marine bacterium isolated from the surface water of a Japanese fishing port
Yuka Machii, Mao Tsukamoto, Takafumi Kataoka, Ryuji Kondo
Antonie van Leeuwenhoek.2025;[Epub] CrossRef -
Comamonas halotolerans sp. nov., isolated from the faecal sample of a zoo animal, Naemorhedus caudatus
Yerim Park, Bitnara Kim, Jihyeon Min, Woojun Park
International Journal of Systematic and Evolutionary Microbiology
.2025;[Epub] CrossRef - Gallibacterium faecale sp. nov., Isolated from Dairy Cow Feces
Seoung Woo Ryu, Jeong Chan Moon, Byeong Seob Oh, Seung Yeob Yu, Jeong Eun Bak, Eun Seo Heo, Seung-Hwan Park, Se Won Kang, Jiyoung Lee, Mi-Kyung Lee, Mooyoung Jung, Yo Han Choi, Hyeun Bum Kim, Jae-Kyung Kim, Ju-Hoon Lee, Ju Huck Lee
Current Microbiology.2025;[Epub] CrossRef - The Isolation and Characterization of a Novel Psychrotolerant Cellulolytic Bacterium, Microbacterium sp. QXD-8T
Peng An, Changjialian Yang, Wei Li, Dahe Zhao, Hua Xiang
Microorganisms.2024; 12(2): 303. CrossRef - Isolation of highly copper-resistant bacteria from deep-sea hydrothermal fields and description of a novel species Marinobacter metalliresistant sp. nov
Tong Yu, Meng Qin, Zongze Shao, Yuemei Zhao, Xiang Zeng
Frontiers in Microbiology.2024;[Epub] CrossRef - Phenazines are involved in the antagonism of a novel subspecies of Pseudomonas chlororaphis strain S1Bt23 against Pythium ultimum
Sylvia I. Chi, Mercy Akuma, Renlin Xu, Véronique Plante, Mehri Hadinezhad, James T. Tambong
Scientific Reports.2024;[Epub] CrossRef - Isoptericola haloaureus sp. nov., a dimorphic actinobacterium isolated from mangrove sediments of southeast India, implicating biosaline agricultural significance through nitrogen fixation and salt tolerance genes
Munisamy Prathaban, Ragothaman Prathiviraj, Mythili Ravichandran, Sharmila Devi Natarajan, Murugesan Sobanaa, S. Hari Krishna Kumar, Varadharaju Chandrasekar, Joseph Selvin
Antonie van Leeuwenhoek.2024;[Epub] CrossRef - Azotosporobacter soli gen. nov., sp. nov., a novel nitrogen-fixing bacterium isolated from paddy soil
Cheng-Jie Xie, Ling Yao, Rong Tang, Shuang Han, Shang Yang, Hend Alwathnani, Christopher Rensing, Guo-Hong Liu, Shun-Gui Zhou
Antonie van Leeuwenhoek.2024;[Epub] CrossRef - Veillonella faecalis sp. nov., a propionic acid-producing bacterium isolated from the faeces of an infant
Haneol Yang, Hana Jo, Seung Hyun Kim, Chan-Seok Yun, Seung-Hwan Park, Doo-Sang Park
Antonie van Leeuwenhoek.2024;[Epub] CrossRef - Rhizobium hidalgonense and Rhizobium redzepovicii as faba bean (Vicia faba L.) microsymbionts in Mexican soils
Flor N. Rivera Ortuña, Joseph Guevara-Luna, Jun Yan, Eloisa Lopez Amezcua, Ivan Arroyo-Herrera, Yan Li, Maria Soledad Vásquez-Murrieta, Danae Rojas Arellano, En Tao Wang
Archives of Microbiology.2024;[Epub] CrossRef -
Chitiniphilus purpureus sp. nov., a novel chitin-degrading bacterium isolated from crawfish pond sediment
Kaiyang Li, Xiong Luo, Rongrong Fan, Zhuoran Ding, Shixue Zheng, Zhengjun Chen
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Augmenting bacterial similarity measures using a graph-based genome representation
Vivek Ramanan, Indra Neil Sarkar, Sergio Baranzini
mSystems.2024;[Epub] CrossRef - Flavobacterium rivulicola sp. nov., Isolated from a Freshwater Stream
Sumin Kim, Miri S. Park, Ilnam Kang, Jang-Cheon Cho
Current Microbiology.2024;[Epub] CrossRef - The genome of a new Halorubrum distributum strain ICIS4 isolated from the culture of a microalga Dunaliella salina
Е. А. Selivanova, А. S. Balkin, Yu. А. Khlopko, V. Ya. Kataev, А. О. Plotnikov
Microbiology.2024; 93(4): 444. CrossRef - Biological Control of Streptomyces sp. PR69 Against Phytophthora capsici and Its Growth-Promoting Effects on Plants
Perla Karina López-Reyes, Susana De la Torre-Zavala, María Mercedes Cortés-González, Luis Jesús Galán-Wong, Hamlet Avilés-Arnaut
Horticulturae.2024; 10(12): 1365. CrossRef - Pectobacterium punjabense Causing Blackleg and Soft Rot of Potato: The First Report in the Russian Federation
Anna A. Vasilyeva, Peter V. Evseev, Alexandr N. Ignatov, Fevzi S.-U. Dzhalilov
Plants.2024; 13(15): 2144. CrossRef - Taxonogenomic analysis of the Xanthomonas translucens complex leads to the descriptions of Xanthomonas cerealis sp. nov. and Xanthomonas graminis sp. nov.
James T. Tambong, Renlin Xu, Maria Constanza Fleitas, Randy Kutcher
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Parendozoicomonas callyspongiae sp. nov. Isolated from a Marine Sponge, Callyspongia elongate, and Reclassification of Sansalvadorimonas verongulae as Parendozoicomonas verongulae comb. nov.
Soo-Bin Kim, Kyung Hyun Kim, Jin-Sook Park
Current Microbiology.2024;[Epub] CrossRef - Congregibacter variabilis sp. nov. and Congregibacter brevis sp. nov. Within the OM60/NOR5 Clade, Isolated from Seawater, and Emended Description of the Genus Congregibacter
Hyeonsu Tak, Miri S. Park, Hyerim Cho, Yeonjung Lim, Jang-Cheon Cho
Journal of Microbiology.2024; 62(9): 739. CrossRef - Analysis of Whole-Genome facilitates rapid and precise identification of fungal species
Guihong Qi, Lijun Hao, Tianyi Xin, Yutong Gan, Qian Lou, Wenjie Xu, Jingyuan Song
Frontiers in Microbiology.2024;[Epub] CrossRef - Transformation of hydroxylated polychlorinated biphenyls by bacterial 2-hydroxybiphenyl 3-monooxygenase
Jachym Suman, Kamila Sredlova, Serena Fraraccio, Martina Jerabkova, Michal Strejcek, Hana Kabickova, Tomas Cajthaml, Ondrej Uhlik
Chemosphere.2024; 349: 140909. CrossRef -
Commensalibacter nepenthis sp. nov. and Commensalibacter oyaizuii sp. nov., from fluid in a Nepenthes pitcher cup and a butterfly (Junonia lemonias) in Thailand
Pattaraporn Yukphan, Piyanat Charoenyingcharoen, Supattra Muangham, Wuttichai Mhuantong, Yuzo Yamada
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Lapidilactobacillus salsurivasis sp. nov., Secundilactobacillus muriivasis sp. nov., and Streptococcus parasalivarius sp. nov., isolated from Traditional Chinese Pickle
Ting-Yu Wang, Chun Yan Li, Hao Wang, Chun Tao Gu
Current Microbiology.2024;[Epub] CrossRef - Comparative pangenome analysis of Enterococcus faecium and Enterococcus lactis provides new insights into the adaptive evolution by horizontal gene acquisitions
Dae Gyu Choi, Ju Hye Baek, Dong Min Han, Shehzad Abid Khan, Che Ok Jeon
BMC Genomics.2024;[Epub] CrossRef - Staphylococcus hsinchuensis sp. nov., Isolated from Soymilk
Yu-Ting Wang, Yu-Chun Lin, Yi-Huei Hsieh, Yu-Tzu Lin, Moriyuki Hamada, Chih-Chieh Chen, Jong-Shian Liou, Ai-Yun Lee, Wei-Ling Zhang, Yung-Tsung Chen, Chien-Hsun Huang
Pathogens.2024; 13(4): 343. CrossRef - Update on the proposed minimal standards for the use of genome data for the taxonomy of prokaryotes
Raúl Riesco, Martha E. Trujillo
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef -
Rhizobium aouanii sp. nov., efficient nodulating rhizobia isolated from Acacia saligna roots in Tunisia
Jihed Hsouna, Takwa Gritli, Houda Ilahi, Jia-Cheng Han, Walid Ellouze, Xiao Xia Zhang, Maroua Mansouri, Praveen Rahi, Mustapha Missbah El Idrissi, Mouad Lamrabet, Pierre Emmanuel Courty, Daniel Wipf, Abdelkader Bekki, James T. Tambong, Bacem Mnasri
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef -
Paralimibaculum aggregatum gen. nov. sp. nov. and Biformimicrobium ophioploci gen. nov. sp. nov., two novel heterotrophs from brittle star Ophioplocus japonicus
Keisuke Kawano, Tatsuya Awano, Arata Yoshinaga, Junji Sugiyama, Shigeki Sawayama, Satoshi Nakagawa
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Characterization and Genomic Analysis of Affinirhizobium gouqiense sp. nov. Isolated from Seawater of Gouqi Island Located in the East China Sea and Reclassification of Rhizobium lemnae to the Genus Affinirhizobium as Affinirhizobium lemnae comb. nov.
Min He, Gen Chen, Ke-Jing Li, Xing-Xing Tang, Xiao-Xiao Liu, Chang-Bin Ren, Hou-Hong Liu, Hai Luo, Sanjit Chandra Debnath, Pin-Mei Wang, Hai-Xin Chen, Dao-Qiong Zheng
Current Microbiology.2024;[Epub] CrossRef -
Eubacterium album sp. nov., a butyrate-producing bacterium isolated from faeces of a healthy human
Feng-Lan Liu, Rashidin Abdugheni, Cong-Guo Ran, Nan Zhou, Shuang-Jiang Liu
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef -
Lentzea sokolovensis sp. nov., Lentzea kristufekii sp. nov. and Lentzea miocenica sp. nov., rare actinobacteria from Miocene lacustrine sediment of the Sokolov Coal Basin, Czech Republic
Ana Catalina Lara, Lucie Kotrbová, Moritz Keller, Imen Nouioui, Meina Neumann-Schaal, Yvonne Mast, Alica Chroňáková
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef -
Rhodoferax potami sp. nov. and Rhodoferax mekongensis sp. nov., isolated from the Mekong River in Thailand
Supattra Kitikhun, Piyanat Charoenyingcharoen, Paopit Siriarchawatana, Somsak Likhitrattanapisal, Thanyakorn Nilsakha, Amonwan Chanpet, Sukanya Jeennor, Pattaraporn Yukphan, Supawadee Ingsriswang
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Thalassotalea aquiviva sp. nov., and Thalassotalea maritima sp. nov., Isolated from Seawater of the Coast in South Korea
Jina Lee, Seung-Hui Song, Kira Moon, Nakyeong Lee, Sangdon Ryu, Hye Seon Song, Sung Moon Lee, Yun Ji Kim, Se Won Chun, Kyung-Min Choi, Aslan Hwanhwi Lee
Journal of Microbiology.2024; 62(12): 1099. CrossRef - Genome Sequencing Unveils Nomadic Traits of Lactiplantibacillus plantarum in Japanese Post-Fermented Tea
Kyoka Sato, Yuichiro Ikagawa, Ryo Niwa, Hiroki Nishioka, Masanori Horie, Hitoshi Iwahashi
Current Microbiology.2024;[Epub] CrossRef - Effects of Limosilactobacillus reuteri strains PTA-126787 and PTA-126788 on intestinal barrier integrity and immune homeostasis in an alcohol-induced leaky gut model
Dharanesh Gangaiah, Min Gu, Aline Zaparte, Olaf Will, Laurie C. Dolan, Anthony Goering, Jason Pillai, Shrinivasrao P. Mane, German Plata, Emily B. Helmes, David A. Welsh, Arvind Kumar Mahajan
Scientific Reports.2024;[Epub] CrossRef - Genomic insights into drug resistance and virulence determinants in rare pyomelanin-producing clinical isolates of Acinetobacter baumannii
Lipsa Panda, Krishnapriya GK, Ajit Ramesh Sawant, Santosh Kumar Singh, Minakshi Gupta, Sheela Devi C, P Shashikala, K Prashanth
European Journal of Clinical Microbiology & Infectious Diseases.2024;[Epub] CrossRef - Genome-guided isolation of the hyperthermophilic aerobe Fervidibacter sacchari reveals conserved polysaccharide metabolism in the Armatimonadota
Nancy O. Nou, Jonathan K. Covington, Dengxun Lai, Xavier Mayali, Cale O. Seymour, Juliet Johnston, Jian-Yu Jiao, Steffen Buessecker, Damon Mosier, Alise R. Muok, Nicole Torosian, Allison M. Cook, Ariane Briegel, Tanja Woyke, Emiley Eloe-Fadrosh, Nicole Sh
Nature Communications.2024;[Epub] CrossRef - Isolation of Sphingopyxis kveilinensis sp. nov., a Potential Antibiotic-Degrading Bacterium, from a Karst Wetland
Ying Chen, Jie Deng, Chengjian Yu
Current Microbiology.2024;[Epub] CrossRef - Transmission and Persistence of Infant Gut-Associated Bifidobacteria
Margaret A. Hilliard, David A. Sela
Microorganisms.2024; 12(5): 879. CrossRef - The Type Strain of Bifidobacterium indicum Scardovi and Trovatelli 1969 (Approved Lists 1980) is ATCC 25912, not DSM 20214, and Rejection to Reclassify Bifidobacterium coryneforme as Bifidobacterium indicum
Cheng-Shan Jiang, Chun Yan Li, Chun Tao Gu
Current Microbiology.2024;[Epub] CrossRef - Cultivation of deep-sea bacteria from the Northwest Pacific Ocean and characterization of Limnobacter profundi sp. nov., a phenol-degrading bacterium
Mirae Kim, Jaeho Song, Seung Yeol Shin, Kazuhiro Kogure, Ilnam Kang, Jang-Cheon Cho
Frontiers in Marine Science.2024;[Epub] CrossRef -
Faecalibacterium taiwanense sp. nov., isolated from human faeces
Jong-Shian Liou, Wei-Ling Zhang, Li-Wen Hsu, Chih-Chieh Chen, Yu-Ting Wang, Koji Mori, Kohei Hidaka, Moriyuki Hamada, Lina Huang, Koichi Watanabe, Chien-Hsun Huang
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef -
Mesorhizobium retamae sp. nov., a novel non-nodulating and non-nitrogen-fixing species isolated from the root nodules of Retama raetam sampled in Tunisia
Roukaya Ben Gaied, Imed Sbissi, Mohamed Tarhouni, Katharina Huber, Jacqueline Wolf, Meina Neumann-Schaal, Imen Nouioui, Faten Ghodhbane-Gtari, Maher Gtari
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Genomic and phenotypic characterization of 26 novel marine bacterial strains with relevant biogeochemical roles and widespread presence across the global ocean
Xavier Rey-Velasco, Teresa Lucena, Ana Belda, Josep M. Gasol, Olga Sánchez, David R. Arahal, María J. Pujalte
Frontiers in Microbiology.2024;[Epub] CrossRef - Lacticaseibacillus jixiensis sp. nov., Isolated from Traditional Chinese Pickle
Si-Tong Song, Chun Yan Li, Chun Tao Gu
Current Microbiology.2024;[Epub] CrossRef -
Paracoccus spongiarum sp. nov., isolated from the marine sponge, Phakellia elegans
Soo-Bin Kim, Kyung Hyun Kim, Jin-Sook Park
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Taxonomic and genomic characterization of a siderophore-producing bacterium, Rhodoligotrophos ferricapiens sp. nov isolated from lettuce cultivation soil
Yu-Jin Kim, Yong-Seok Kim, Chang-Jun Cha
Antonie van Leeuwenhoek.2024;[Epub] CrossRef - Saccharopolyspora mangrovi sp. nov., a novel mangrove soil actinobacterium with distinct metabolic potential revealed by comparative genomic analysis
Yi-Ting Lu, Yi-Yi Wu, Ya-Nan Li, Wei-Yi Zheng, Wen-Zheng Liu
Archives of Microbiology.2024;[Epub] CrossRef - The Genome of a New Halorubrum distributum Strain ICIS4 Isolated from the Culture of a Microalga Dunaliella salina
E. A. Selivanova, A. S. Balkin, Yu. A. Khlopko, V. Ya. Kataev, A. O. Plotnikov
Microbiology.2024; 93(4): 482. CrossRef - Luteibacter sahnii sp. nov., A Novel Yellow-Colored Xanthomonadin Pigment Producing Probiotic Bacterium from Healthy Rice Seed Microbiome
Gagandeep Jaiswal, Rekha Rana, Praveen Kumar Nayak, Rekha Chouhan, Sumit G. Gandhi, Hitendra K. Patel, Prabhu B. Patil
Current Microbiology.2024;[Epub] CrossRef - Genomic analysis of the class Phycisphaerae reveals a versatile group of complex carbon-degrading bacteria
Wouter B. Lenferink, Theo A. van Alen, Mike S. M. Jetten, Huub J. M. Op den Camp, Maartje A. H. J. van Kessel, Sebastian Lücker
Antonie van Leeuwenhoek.2024;[Epub] CrossRef - Analysis of Whole-Genome for Identification of Seven Penicillium Species with Significant Economic Value
Yuanhao Huang, Lianguo Fu, Yutong Gan, Guihong Qi, Lijun Hao, Tianyi Xin, Wenjie Xu, Jingyuan Song
International Journal of Molecular Sciences.2024; 25(15): 8172. CrossRef - Jatrophihabitans cynanchi sp. nov., isolated from rhizosphere soil of Cynanchum wilfordii
Min Kuk Suh, Ji-Sun Kim, Mi Kyung Eom, Han Sol Kim, Hyo Eun Do, Yong Kook Shin, Jung- Sook Lee
Antonie van Leeuwenhoek.2024;[Epub] CrossRef - Proposal of Crystallibacter gen. nov., Crystallibacter permensis sp. nov. and Crystallibacter degradans sp. nov. for the salt-tolerant and aromatics degrading actinobacteria, and reclassification of Arthrobacter crystallopoietes as Crystallibacter crystal
Elena G. Plotnikova, Elena V. Ariskina, Olga V. Yastrebova, Natalia V. Potekhina, Alexander N. Avtukh, Sergey V. Tarlachkov, Irina P. Starodumova, Lyubov V. Dorofeeva, Lyudmila I. Evtushenko
Antonie van Leeuwenhoek.2024;[Epub] CrossRef - Helicovermis profundi gen. nov., sp. nov., a novel mesophilic, asporogenous bacterium within the Clostridia isolated from a deep-sea hydrothermal vent chimney
Urara Miyazaki, Daiki Mizutani, Yurina Hashimoto, Akihiro Tame, Shigeki Sawayama, Junichi Miyazaki, Ken Takai, Satoshi Nakagawa
Antonie van Leeuwenhoek.2024;[Epub] CrossRef - Patterns of Change in Nucleotide Diversity Over Gene Length
Farhan Ali, Brian Golding
Genome Biology and Evolution.2024;[Epub] CrossRef - SeqCode facilitates naming of South African rhizobia left in limbo
Melandré van Lill, Stephanus N. Venter, Esther K. Muema, Marike Palmer, Wai Y. Chan, Chrizelle W. Beukes, Emma T. Steenkamp
Systematic and Applied Microbiology.2024; 47(2-3): 126504. CrossRef - Bifidobacterium apicola sp. nov., isolated from the gut of honeybee (Apis mellifera)
Ting-Yu Wang, Hao Wang, Chun Tao Gu
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Detecting horizontal gene transfer among microbiota: an innovative pipeline for identifying co-shared genes within the mobilome through advanced comparative analysis
Jana Schwarzerova, Michal Zeman, Vladimir Babak, Katerina Jureckova, Marketa Nykrynova, Margaret Varga, Wolfram Weckwerth, Monika Dolejska, Valentine Provaznik, Ivan Rychlik, Darina Cejkova, Feng Gao, Johannes Wöstemeyer, Shay Tal, Alejandro Piña-Iturbe,
Microbiology Spectrum.2024;[Epub] CrossRef - Host genetic regulation of human gut microbial structural variation
Daria V. Zhernakova, Daoming Wang, Lei Liu, Sergio Andreu-Sánchez, Yue Zhang, Angel J. Ruiz-Moreno, Haoran Peng, Niels Plomp, Ángela Del Castillo-Izquierdo, Ranko Gacesa, Esteban A. Lopera-Maya, Godfrey S. Temba, Vesla I. Kullaya, Sander S. van Leeuwen, R
Nature.2024; 625(7996): 813. CrossRef - Uncovering the lignin-degrading potential of Serratia quinivorans AORB19: insights from genomic analyses and alkaline lignin degradation
Nadia Sufdar Ali, Subarna Thakur, Mengwei Ye, Fanny Monteil-Rivera, Youlian Pan, Wensheng Qin, Trent Chunzhong Yang
BMC Microbiology.2024;[Epub] CrossRef - Taxonomic note on Kocuria and Rothia: taxogenomic insights for addressing misidentifications and proposing new combinations and new subspecies
Faten Ghodhbane-Gtari, Mohamed Aziz Haj Nasr, Rafik Gatri, Maher Gtari
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Chengkuizengella axinellae sp. nov., a symbiotic bacterium isolated from a marine sponge of the genus Axinella
Yea-Lin Moon, Kyung Hyun Kim, Jin-Sook Park
Antonie van Leeuwenhoek.2024;[Epub] CrossRef - Adlercreutzia faecimuris sp. nov., producing propionate and acetate isolated from mouse feces
Min Kuk Suh, Jong- Sik Jin, Hyo Eun Do, Ji-Sun Kim, Mi Kyung Eom, Han Sol Kim, Jung- Sook Lee
Antonie van Leeuwenhoek.2024;[Epub] CrossRef - Xanthomonas chitinilytica sp. nov., a novel chitinolytic bacterium isolated from a microbial fermentation bed material
Xiaodong Liu, Xin Liu, Zhenshan Deng, Xiaolong He, Yingying Jiang
Antonie van Leeuwenhoek.2024;[Epub] CrossRef - Kribbella caucasensis sp. nov. from the Soil of the North Caucasus Mountains
A. N. Avtukh, E. V. Ariskina, L. M. Baryshnikova, N. V. Prisyazhnaya, L. V. Dorofeeva, L. I. Evtushenko
Microbiology.2024; 93(6): 730. CrossRef -
Peptostreptococcus equinus sp. nov., isolated from horse faeces
Hye Su Jung, Jeong Ui Yun, Mi-Ja Jung, Hye Seon Song, Yeon Bee Kim, Yujin Kim, Min Ji Lee, Jisu Lee, Che Ok Jeon, Seong Woon Roh, Tae Woong Whon, Joon-Gyu Kim, Se Hee Lee
International Journal of Systematic and Evolutionary Microbiology
.2024;[Epub] CrossRef - Aurantiacibacter poecillastricola sp. nov., Isolated from the Marine Sponge, Poecillastra wondoensis, and Reclassification of Erythrobacter alti as Aurantiacibacter alti comb. nov.
Soo-Bin Kim, Kyung Hyun Kim, Jin-Sook Park
Journal of Microbiology and Biotechnology.2024;[Epub] CrossRef - Philodulcilactobacillus myokoensis gen. nov., sp. nov., a fructophilic, acidophilic, and agar-phobic lactic acid bacterium isolated from fermented vegetable extracts
Tomoaki Kouya, Yohei Ishiyama, Shota Ohashi, Ryota Kumakubo, Takeshi Yamazaki, Toshiki Otaki, Guadalupe Virginia Nevárez-Moorillón
PLOS ONE.2023; 18(6): e0286677. CrossRef - Comparative Genomic Analysis and BTEX Degradation Pathways of a Thermotolerant Cupriavidus cauae PHS1
Chandran Sathesh-Prabu, Jihoon Woo, Yuchan Kim, Suk Min Kim, Sun Bok Lee, Che Ok Jeon, Donghyuk Kim, Sung Kuk Lee
Journal of Microbiology and Biotechnology.2023; 33(7): 875. CrossRef -
Complete genome sequence of the emerging pathogen
Cysteiniphilum
spp. and comparative genomic analysis with genus
Francisella
: Insights into its genetic diversity and potential virulence traits
Changrui Qian, Mengxin Xu, Zeyu Huang, Miran Tan, Cheng Fu, Tieli Zhou, Jianming Cao, Cui Zhou
Virulence.2023;[Epub] CrossRef -
Psychroserpens ponticola sp. nov. and Marinomonas maritima sp. nov., isolated from seawater
Sylvia Kristyanto, Jaejoon Jung, Jeong Min Kim, Byeong Jun Choi, Dong Min Han, Sung Chul Lee, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Atopomonas sediminilitoris sp. nov., isolated from beach sediment of Zhairuo Island, China
Kejing Li, Zhenbo Ye, Gen Chen, Kaiwen Zheng, Jun Yin, Sanjit Chandra Debnath, Cen Yan, Yi Hong, Zhen Guo, Pinmei Wang, Fabai Wu, Daoqiong Zheng
Antonie van Leeuwenhoek.2023; 116(2): 97. CrossRef - Chryseobacterium paludis sp. nov. and Chryseobacterium foetidum sp. nov. Isolated from the Aquatic Environment, South Korea
Miryung Kim, Yong-Seok Kim, Chang-Jun Cha
Journal of Microbiology.2023; 61(1): 37. CrossRef -
Paenibacillus soyae sp. nov., isolated from the rhizosphere of soya bean
Hui Zhao, Yue Su, Qihui Gu, Jumei Zhang, Xinqiang Xie, Qingping Wu
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Geothrix oryzisoli sp. nov., a ferric iron-reducing bacterium isolated from paddy soil
Shuang Han, Rong Tang, Shang Yang, Cheng-Jie Xie, Manik Prabhu Narsing Rao, Christopher Rensing, Guo-Hong Liu, Shun-Gui Zhou
Antonie van Leeuwenhoek.2023; 116(5): 477. CrossRef - Description of Luteibacter aegosomatis sp. nov., Luteibacter aegosomaticola sp. nov., and Luteibacter aegosomatissinici sp. nov. isolated from the Intestines of Aegosoma sinicum Larvae
Hae-In Joe, Jee-Won Choi, June-Young Lee, Hojun Sung, Su-Won Jeong, Yun-Seok Jeong, Jae-Yun Lee, Jin-Woo Bae
Journal of Microbiology.2023; 61(6): 603. CrossRef -
Hoeflea algicola sp. nov. and Hoeflea ulvae sp. nov., isolated from phycosphere of marine algae
Ju Hye Baek, Sylvia Kristyanto, Jeong Min Kim, Dong Min Han, Zhe-Xue Quan, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Muricauda myxillae sp. nov., isolated from a marine sponge (Myxilla rosacea), and reclassification of Flagellimonas hymeniacidonis as Muricauda symbiotica nom. nov.
Yea-Lin Moon, Kyung-Hyun Kim, Jin-Sook Park
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Description and Genomic Characteristics of Weissella fermenti sp. nov., Isolated from Kimchi
Jae Kyeong Lee, Ju Hye Baek, Dong Min Han, Se Hee Lee, So Young Kim, Che Ok Jeon
Journal of Microbiology and Biotechnology.2023; 33(11): 1448. CrossRef -
Dyadobacter pollutisoli sp. nov., isolated from plastic waste landfill soil
Kyeong Ryeol Kim, Jeong Min Kim, Jae Kyeong Lee, Dong Min Han, Lujiang Hao, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - UFCG: database of universal fungal core genes and pipeline for genome-wide phylogenetic analysis of fungi
Dongwook Kim, Cameron L M Gilchrist, Jongsik Chun, Martin Steinegger
Nucleic Acids Research.2023; 51(D1): D777. CrossRef - Ancient Rapid Radiation Explains Most Conflicts Among Gene Trees and Well-Supported Phylogenomic Trees of Nostocalean Cyanobacteria
Carlos J Pardo-De la Hoz, Nicolas Magain, Bryan Piatkowski, Luc Cornet, Manuela Dal Forno, Ignazio Carbone, Jolanta Miadlikowska, François Lutzoni, Claudia Lemus-Solis
Systematic Biology.2023; 72(3): 694. CrossRef - Zwartia vadi sp. nov., a Novel Species of the GKS98 Cluster Isolated from a Stream, and the Reclassification of ‘Achromobacter Panacis’ as Zwartia panacis comb. nov
Miri S. Park, Ilnam Kang, Jang-Cheon Cho
Microorganisms.2023; 11(9): 2150. CrossRef - Comparative genomics reveals environmental adaptability and antimicrobial activity of a novel Streptomyces isolated from soil under black Gobi rocks
Ying Wen, Binglin Zhang, Gaosen Zhang, Minghui Wu, Ximing Chen, Tuo Chen, Guangxiu Liu, Wei Zhang
Antonie van Leeuwenhoek.2023; 116(12): 1407. CrossRef - Phylogenomic Insights on the Xanthomonas translucens Complex, and Development of a TaqMan Real-Time Assay for Specific Detection of pv. translucens on Barley
James T. Tambong, Renlin Xu, Maria Constanza Fleitas, Lipu Wang, Keith Hubbard, Randy Kutcher
Phytopathology®.2023; 113(11): 2091. CrossRef - Microvirga terrae sp. nov., Isolated from Soil
Kyung Hyun Kim, Ju Hye Baek, Sang Eun Jeong, Lujiang Hao, Che Ok Jeon
Current Microbiology.2023;[Epub] CrossRef - Incidence, genetic diversity, and antimicrobial resistance profiles of Vibrio parahaemolyticus in seafood in Bangkok and eastern Thailand
Chartchai Changsen, Somsak Likhitrattanapisal, Kamonwan Lunha, Wiyada Chumpol, Surasak Jiemsup, Anuphap Prachumwat, Darin Kongkasuriyachai, Supawadee Ingsriswang, Soraya Chaturongakul, Aekarin Lamalee, Suganya Yongkiettrakul, Sureemas Buates
PeerJ.2023; 11: e15283. CrossRef - Streptomonospora mangrovi sp. nov., isolated from mangrove soil showing similar metabolic capabilities, but distinct secondary metabolites profiles
Cheng Zhen, Xin-Kai Chen, Xian-Feng Ge, Wen-Zheng Liu
Archives of Microbiology.2023;[Epub] CrossRef -
Alkalicoccobacillus porphyridii sp. nov., isolated from a marine red alga, reclassification of Shouchella plakortidis and Shouchella gibsonii as Alkalicoccobacillus plakortidis comb. nov. and Alkalicoccobacillus gibsonii comb. nov., and emend
Kyung Hyun Kim, Dong Min Han, Jae Kyeong Lee, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - UACG: Up-to-Date Archaeal Core Genes and Software for Phylogenomic Tree Reconstruction
Seong-In Na, Michael James Bailey, Mauricio Chalita, Jae Hyoung Cho, Jongsik Chun
Journal of Microbiology.2023; 61(7): 683. CrossRef -
Alishewanella maricola sp. nov., isolated from seawater of the Yellow Sea
Kyung Hyun Kim, Jeong Min Kim, Hyun Mi Jin, Lujiang Hao, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Cutibacterium equinum sp. nov., isolated from horse faeces
Jeong Ui Yun, Hye Su Jung, Mi-Ja Jung, Hye Seon Song, Yeon Bee Kim, Yujin Kim, Joon-Gyu Kim, Seong Woon Roh, Se Hee Lee, Jun Sik Lee, Tae Woong Whon
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Sugar Concentration, Nitrogen Availability, and Phylogenetic Factors Determine the Ability of Acinetobacter spp. and Rosenbergiella spp. to Grow in Floral Nectar
José R. Morales-Poole, Clara de Vega, Kaoru Tsuji, Hans Jacquemyn, Robert R. Junker, Carlos M. Herrera, Chris Michiels, Bart Lievens, Sergio Álvarez-Pérez
Microbial Ecology.2023; 86(1): 377. CrossRef -
Silvimonas soli sp. nov., a new member of Chromobacteriaceae isolated from soil in Norrbyskär island, Sweden
Martina Jerabkova, Tereza Smrhova, Eglantina Lopez-Echartea, Jiri Dresler, Jachym Suman, Gabriela Kapinusova, Tomas Cajthaml, Zdena Skrob, Robin Kyclt, Jonas Fagerman, Michal Strejcek, Ondrej Uhlik
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Actinophytocola gossypii sp. nov. and Streptomyces gossypii sp. nov., two novel actinomycetes isolated from rhizosphere soil of cotton
Xianfeng Ge, Shenrong Yang, Cheng Zhen, Wenzheng Liu
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Phylogenomic analysis of the genus Rosenbergiella and description of Rosenbergiella gaditana sp. nov., Rosenbergiella metrosideri sp. nov., Rosenbergiella epipactidis subsp. epipactidis subsp. nov., Rosenbergiella epipactidis subsp. californiensis subsp.
Sergio Álvarez-Pérez, Clara de Vega, Kristof Vanoirbeek, Kaoru Tsuji, Hans Jacquemyn, Tadashi Fukami, Chris Michiels, Bart Lievens
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Thermomonas mangrovi sp. nov., isolated from soil of a mangrove nature reserve
Shanshan Xu, Junpeng Chen, Si Chen, Qiliang Lai, Zengzhi Liu, Ying Xu
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Tahibacter soli sp. nov., isolated from soil and Tahibacter amnicola sp. nov., isolated from freshwater
Ju Hye Baek, Dong Min Han, Jeong Min Kim, Baolei Jia, Ji Young Jung, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Phylogenomic reappraisal of the family Rhizobiaceae at the genus and species levels, including the description of Ectorhizobium quercum gen. nov., sp. nov.
Tengfei Ma, Han Xue, Chungen Piao, Ning Jiang, Yong Li
Frontiers in Microbiology.2023;[Epub] CrossRef -
Antarcticirhabdus aurantiaca gen. nov., sp. nov., isolated from Antarctic gravel soil
Jie Du, Ying Zhang, Di Xin, Yuhua Xin, Jianli Zhang
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Caldimonas mangrovi sp. nov., Isolated from Mangrove Soil
S. R. Yang, Y. Y. Liu, X. F. Ge, W. Z. Liu
Microbiology.2023; 92(4): 500. CrossRef - Chitinophaga horti sp. nov., Isolated from Garden Soil
Dong Min Han, Ju Hye Baek, Dae Gyu Choi, Myeong Seo Jin, Che Ok Jeon
Current Microbiology.2023;[Epub] CrossRef - Streptomyces pacificus sp. nov., a novel spongiicolazolicin-producing actinomycete isolated from a coastal sediment
Miku Takahashi, Shoya Shinohara, Moriyuki Hamada, Tomohiko Tamura, Hideo Dohra, Shinya Kodani, Youji Nakagawa, Susumu Kokubo, Masayuki Hayakawa, Hideki Yamamura
The Journal of Antibiotics.2023; 76(2): 93. CrossRef - MALDI-TOF MS analysis of Burkholderia pseudomallei and closely related species isolated from soils and water in Khon Kaen, Thailand
Nut Nithimongkolchai, Yothin Hinwan, Benjawan Kaewseekhao, Pisit Chareonsudjai, Pipat Reungsang, Ratthaphol Kraiklang, Sorujsiri Chareonsudjai, Lumyai Wonglakorn, Ploenchan Chetchotisakd, Auttawit Sirichoat, Arnone Nithichanon, Kiatichai Faksri
Infection, Genetics and Evolution.2023; 116: 105532. CrossRef - Flavobacterium psychrotrophum sp. nov. and Flavobacterium panacagri sp. nov., Isolated from Freshwater and Soil
Yong-Seok Kim, Eun-Mi Hwang, Chang-Myeong Jeong, Chang-Jun Cha
Journal of Microbiology.2023; 61(10): 891. CrossRef - VBCG: 20 validated bacterial core genes for phylogenomic analysis with high fidelity and resolution
Renmao Tian, Behzad Imanian
Microbiome.2023;[Epub] CrossRef - tilS and rpoB: New Molecular Markers for Phylogenetic and Biodiversity Studies of the Genus Thiothrix
Nikolai V. Ravin, Dmitry D. Smolyakov, Nikita D. Markov, Alexey V. Beletsky, Andrey V. Mardanov, Tatyana S. Rudenko, Margarita Yu. Grabovich
Microorganisms.2023; 11(10): 2521. CrossRef -
Thermomonas paludicola sp. nov., isolated from a lotus wetland
Mirae Kim, Miri S. Park, Ilnam Kang, Jang-Cheon Cho
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef -
Octadecabacter algicola sp. nov. and Octadecabacter dasysiphoniae sp. nov., isolated from a marine red alga and emended description of the genus Octadecabacter
Myeong Seo Jin, Kyung Hyun Kim, Ju Hye Baek, Jeong Min Kim, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology
.2023;[Epub] CrossRef - Flavihumibacter fluminis sp. nov. and Flavihumibacter rivuli sp. nov., isolated from a freshwater stream
Miri S. Park, Hyeonuk Sa, Ilnam Kang, Jang-Cheon Cho
Journal of Microbiology.2022; 60(8): 806. CrossRef - Exploring the genome of Lactobacillaceae spp. Sy-1 isolated from Heterotrigona itama honey
Syariffah Nuratiqah Syed Yaacob, Fahrul Huyop, Mailin Misson, Roswanira Abdul Wahab, Nurul Huda
PeerJ.2022; 10: e13053. CrossRef - Micrococcus porci sp. nov., Isolated from Feces of Black Pig (Sus scrofa)
Ai-Yun Lee, Chia-Hsuan Chen, Jong-Shian Liou, Yu-Chun Lin, Moriyuki Hamada, Yu-Ting Wang, Lin-Liang Peng, Shen-Chang Chang, Chih-Chieh Chen, Chuen-Fu Lin, Lina Huang, Chien-Hsun Huang
Life.2022; 12(11): 1749. CrossRef - Pseudonocardia humida sp. nov., an Actinomycete Isolated from Mangrove Soil Showing Distinct Distribution Pattern of Biosynthetic Gene Clusters
Zhen-Yu Zan, Xian-Feng Ge, Rui-Rui Huang, Wen-Zheng Liu
Current Microbiology.2022;[Epub] CrossRef -
Occultella gossypii sp. nov., an alkali-resistant isolate from soil sampled in a cotton field
Xianfeng Ge, Ruirui Huang, Wenzheng Liu
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Rhodococcus oxybenzonivorans sp. nov., a benzophenone-3-degrading bacterium, isolated from stream sediment
Ju Hye Baek, Woonhee Baek, Sang Eun Jeong, Sung Chul Lee, Hyun Mi Jin, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology.2022;[Epub] CrossRef - Pedobacter aquae sp. nov., a multi-drug resistant bacterium isolated from fresh water
Le Tran Tien Chau, Yong-Seok Kim, Chang-Jun Cha
Antonie van Leeuwenhoek.2022; 115(3): 445. CrossRef - Amsterdam urban canals contain novel niches for methane‐cycling microorganisms
Koen A. J. Pelsma, Michiel H. in 't Zandt, Huub J. M. Op den Camp, Mike S. M. Jetten, Joshua F. Dean, Cornelia U. Welte
Environmental Microbiology.2022; 24(1): 82. CrossRef -
Roseovarius carneus sp. nov., a novel bacterium isolated from a coastal phytoplankton bloom in Xiamen
Xueqiong Sun, Dan Lin, Yu Han, Jia Sun, Jianing Ye, Beihan Chen, Kai Tang
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
Tenacibaculum aquimarinum sp. nov., isolated from a marine alga and seawater
Sylvia Kristyanto, Kyeong Ryeol Kim, Jaejoon Jung, Hyung Min Kim, Keunpil Kim, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
Rheinheimera maricola sp. nov., isolated from seawater of the Yellow Sea
Kyung Hyun Kim, Ju Hye Baek, Ruan Wenting, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
Apilactobacillus apisilvae sp. nov., Nicolia spurrieriana gen. nov. sp. nov., Bombilactobacillus folatiphilus sp. nov. and Bombilactobacillus thymidiniphilus sp. nov., four new lactic acid bacterial isolates from stingless bees Tetragonula ca
Scott A. Oliphant, Nathan S. Watson-Haigh, Krista M. Sumby, Jennifer Gardner, Scott Groom, Vladimir Jiranek
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Description of Polaribacter batillariae sp. nov., Polaribacter cellanae sp. nov., and Polaribacter pectinis sp. nov., novel bacteria isolated from the gut of three types of South Korean shellfish
Su-Won Jeong, Jeong Eun Han, June-Young Lee, Ji-Ho Yoo, Do-Yeon Kim, In Chul Jeong, Jee-Won Choi, Yun-Seok Jeong, Jae-Yun Lee, So-Yeon Lee, Euon Jung Tak, Hojun Sung, Hyun Sik Kim, Pil Soo Kim, Dong-Wook Hyun, Jin-Woo Bae
Journal of Microbiology.2022; 60(6): 576. CrossRef -
Neokomagataea anthophila sp. nov., an osmotolerant acetic acid bacterium isolated in Thailand and emended description of the genus Neokomagataea
Piyanat Charoenyingcharoen, Pattaraporn Yukphan, Sukunphat Malimas, Somsak Likhitrattanapisal, Somboon Tanasupawat, Yuzo Yamada
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
Massilia soli sp. nov., isolated from soil
Ju Hye Baek, Woonhee Baek, Wenting Ruan, Hye Su Jung, Sung Chul Lee, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
Parasphingorhabdus cellanae sp. nov., isolated from the gut of a Korean limpet, Cellana toreuma
Ji-Ho Yoo, Jeong Eun Han, June-Young Lee, Su-Won Jeong, Yun-Seok Jeong, Jae-Yun Lee, So-Yeon Lee, Hojun Sung, Euon Jung Tak, Hyun Sik Kim, Pil Soo Kim, Jee-Won Choi, Do-Yeon Kim, In Chul Jeong, Do-Hun Gim, Seo Min Kang, Jin-Woo Bae
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
Actinotalea soli sp. nov., isolated from Kubuqi Desert soil
Jie Du, Weiwei Ping, Ya Chen, Huancheng Pang, Pengze Bai, Siqi Cui, Jianli Zhang
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef -
Arsenicicoccus cauae sp. nov., isolated from the blood of a pediatric gastroenteritis patient
Oh Joo Kweon, Kyung Hyun Kim, Hyung Min Kim, Shehzad Abid Khan, Ji Hun Jeong, Yong Kwan Lim, Hye Ryoun Kim, Che Ok Jeon, Mi-Kyung Lee
International Journal of Systematic and Evolutionary Microbiology
.2022;[Epub] CrossRef - Ramlibacter terrae sp. nov. and Ramlibacter montanisoli sp. nov., Isolated from Soil
Shehzad Abid Khan, Hyung Min Kim, Ju Hye Baek, Hye Su Jung, Che Ok Jeon
Journal of Microbiology and Biotechnology.2021; 31(9): 1210. CrossRef -
Ramlibacter algicola sp. nov., isolated from a freshwater alga Cryptomonas obovoidea
Hyung Min Kim, Dong Min Han, Byung Hee Chun, Hye Su Jung, Kyung Hyun Kim, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology
.2021;[Epub] CrossRef
Reviews
- REVIEW] Mind-altering with the gut: Modulation of the gut-brain axis with probiotics
-
Namhee Kim , Misun Yun , Young Joon Oh , Hak-Jong Choi
-
J. Microbiol. 2018;56(3):172-182. Published online February 28, 2018
-
DOI: https://doi.org/10.1007/s12275-018-8032-4
-
-
46
View
-
0
Download
-
134
Crossref
-
Abstract
-
It is increasingly evident that bidirectional interactions exist
among the gastrointestinal tract, the enteric nervous system,
and the central nervous system. Recent preclinical and clinical
trials have shown that gut microbiota plays an important role
in these gut-brain interactions. Furthermore, alterations in gut
microbiota composition may be associated with pathogenesis
of various neurological disorders, including stress, autism, depression,
Parkinson’s disease, and Alzheimer’s disease. Therefore,
the concepts of the microbiota-gut-brain axis is emerging.
Here, we review the role of gut microbiota in bidirectional
interactions between the gut and the brain, including
neural, immune-mediated, and metabolic mechanisms. We
highlight recent advances in the understanding of probiotic
modulation of neurological and neuropsychiatric disorders
via the gut-brain axis.
-
Citations
Citations to this article as recorded by

- Psychobiotic potential of Lactiplantibacillus plantarum: Current perspective in neurodegeneration and geriatric therapies
Nishant Gupta, Ashok Kumar Agarwal, M. Al-Dossari, N.S. Abd EL-Gawaad
Brain Behavior and Immunity Integrative.2024; 5: 100038. CrossRef - Glyphosate: Hepatotoxicity, Nephrotoxicity, Hemotoxicity, Carcinogenicity, and Clinical Cases of Endocrine, Reproductive, Cardiovascular, and Pulmonary System Intoxication
Jarosław Mazuryk, Katarzyna Klepacka, Włodzimierz Kutner, Piyush Sindhu Sharma
ACS Pharmacology & Translational Science.2024; 7(5): 1205. CrossRef - The intersection of microbiome and autoimmunity in long COVID-19: Current insights and future directions
Altijana Hromić-Jahjefendić, Lejla Mahmutović, Abas Sezer, Tea Bećirević, Alberto Rubio-Casillas, Elrashdy M. Redwan, Vladimir N. Uversky
Cytokine & Growth Factor Reviews.2024;[Epub] CrossRef - The Postbiotic Properties of Butyrate in the Modulation of the Gut Microbiota: The Potential of Its Combination with Polyphenols and Dietary Fibers
Jessica Maiuolo, Rosa Maria Bulotta, Stefano Ruga, Saverio Nucera, Roberta Macrì, Federica Scarano, Francesca Oppedisano, Cristina Carresi, Micaela Gliozzi, Vincenzo Musolino, Rocco Mollace, Carolina Muscoli, Vincenzo Mollace
International Journal of Molecular Sciences.2024; 25(13): 6971. CrossRef - Exploring the Multifaceted Therapeutic Potential of Probiotics: A Review of Current Insights and Applications
Kashyapi Chakravarty, Smriti Gaur, Rohit Kumar, Niraj Kumar Jha, Piyush Kumar Gupta
Probiotics and Antimicrobial Proteins.2024;[Epub] CrossRef - A Narrative Review of Intestinal Microbiota’s Impact on Migraine with Psychopathologies
Miriam Francavilla, Sara Facchetti, Chiara Demartini, Anna Maria Zanaboni, Chiara Amoroso, Sara Bottiroli, Cristina Tassorelli, Rosaria Greco
International Journal of Molecular Sciences.2024; 25(12): 6655. CrossRef - M3HOGAT: A Multi-View Multi-Modal Multi-Scale High-Order Graph Attention Network for Microbe-Disease Association Prediction
Shuang Wang, Jin-Xing Liu, Feng Li, Juan Wang, Ying-Lian Gao
IEEE Journal of Biomedical and Health Informatics.2024; 28(10): 6259. CrossRef - The importance of the gut microbiome and its signals for a healthy nervous system and the multifaceted mechanisms of neuropsychiatric disorders
Lydia Riehl, Johannes Fürst, Michaela Kress, Nadiia Rykalo
Frontiers in Neuroscience.2024;[Epub] CrossRef - The gut microbiome and the brain
Nadiia Rykalo, Lydia Riehl, Michaela Kress
Current Opinion in Supportive & Palliative Care.2024; 18(4): 282. CrossRef - An Updated View of the Effect of Probiotic Supplement on Sports Performance: A Detailed Review
Miray Nur Aykut, Esma Nur Erdoğan, Menşure Nur Çelik, Murat Gürbüz
Current Nutrition Reports.2024; 13(2): 251. CrossRef - Efficacy and Safety of Bacillus coagulans LBSC in Drug Induced Constipation Associated With Functional Gastrointestinal Disorder: A Double-Blind, Randomized, Interventional, Parallel, Controlled Trial a Clinical Study on Bacillus coagulans LBSC for Drug I
Ankit Rathi, Ravikiran Pagare
Global Advances in Integrative Medicine and Health.2024;[Epub] CrossRef - The Gut Microbiota’s Role in Neurological, Psychiatric, and Neurodevelopmental Disorders
Ioannis Alexandros Charitos, Angelo Michele Inchingolo, Laura Ferrante, Francesco Inchingolo, Alessio Danilo Inchingolo, Francesca Castellaneta, Antonella Cotoia, Andrea Palermo, Salvatore Scacco, Gianna Dipalma
Nutrients.2024; 16(24): 4404. CrossRef - Gut-Brain Axis a Key Player to Control Gut Dysbiosis in Neurological Diseases
Ieshita Pan, Praveen Kumar Issac, Md. Mostafizur Rahman, Ajay Guru, Jesu Arockiaraj
Molecular Neurobiology.2024; 61(12): 9873. CrossRef - Glyphosate: Impact on the microbiota-gut-brain axis and the immune-nervous system, and clinical cases of multiorgan toxicity
Jarosław Mazuryk, Katarzyna Klepacka, Włodzimierz Kutner, Piyush Sindhu Sharma
Ecotoxicology and Environmental Safety.2024; 271: 115965. CrossRef - Functional metabolites of probiotic lactic acid bacteria in fermented dairy products
T. Jayasree Joshi, Salini S.V, Lakshmi Mohan, P. Nandagopal, Jobil J. Arakal
Food and Humanity.2024; 3: 100341. CrossRef - Psychobiotic Properties of Lactiplantibacillus plantarum in Neurodegenerative Diseases
Mariagiovanna Di Chiano, Fabio Sallustio, Daniela Fiocco, Maria Teresa Rocchetti, Giuseppe Spano, Paola Pontrelli, Antonio Moschetta, Loreto Gesualdo, Raffaella Maria Gadaleta, Anna Gallone
International Journal of Molecular Sciences.2024; 25(17): 9489. CrossRef - Co-administration of probiotics and vitamin D reduced disease severity and complications in patients with Parkinson’s disease: a randomized controlled clinical trial
Alireza Zali, Shirin Hajyani, Mehri Salari, Maryam Tajabadi-Ebrahimi, Amir M. Mortazavian, Bahareh Pakpour
Psychopharmacology.2024; 241(9): 1905. CrossRef - The History and Prediction of Prebiotics and Postbiotics: A Patent Analysis
Tao Zang, Lu Han, Zhaoxiang Lu, Lulu Tan, Dunsheng Liang, Xiaofan Shen, Xiaoping Liao, Yahong Liu, Hao Ren, Jian Sun
Nutrients.2024; 16(3): 380. CrossRef - Economic microbiology: exploring microbes as agents in economic systems
Nicola Luigi Bragazzi, Woldegebriel Assefa Woldegerima, Anna Siri
Frontiers in Microbiology.2024;[Epub] CrossRef - Electroacupuncture remodels gut microbiota and metabolites in mice with perioperative neurocognitive impairment
Lu Tang, Xiaojia Zhang, Binsen Zhang, Tianren Chen, Zhongying Du, Wenjing Song, Wenqiang Chen, Chunai Wang
Experimental Gerontology.2024; 194: 112507. CrossRef - Unlocking the Potential of Probiotics: A Comprehensive Review on Research, Production, and Regulation of Probiotics
Tales Fernando da Silva, Rafael de Assis Glória, Monique Ferrary Americo, Andria dos Santos Freitas, Luis Claudio Lima de Jesus, Fernanda Alvarenga Lima Barroso, Juliana Guimarães Laguna, Nina Dias Coelho-Rocha, Laisa Macedo Tavares, Yves le Loir, Gwénaël
Probiotics and Antimicrobial Proteins.2024; 16(5): 1687. CrossRef - A computational model for potential microbe–disease association detection based on improved graph convolutional networks and multi-channel autoencoders
Chuyi Zhang, Zhen Zhang, Feng Zhang, Bin Zeng, Xin Liu, Lei Wang
Frontiers in Microbiology.2024;[Epub] CrossRef - OGNNMDA: a computational model for microbe-drug association prediction based on ordered message-passing graph neural networks
Jiabao Zhao, Linai Kuang, An Hu, Qi Zhang, Dinghai Yang, Chunxiang Wang
Frontiers in Genetics.2024;[Epub] CrossRef - Nutritional Modulation of the Gut–Brain Axis: A Comprehensive Review of Dietary Interventions in Depression and Anxiety Management
Mariana Merino del Portillo, Vicente Javier Clemente-Suárez, Pablo Ruisoto, Manuel Jimenez, Domingo Jesús Ramos-Campo, Ana Isabel Beltran-Velasco, Ismael Martínez-Guardado, Alejandro Rubio-Zarapuz, Eduardo Navarro-Jiménez, José Francisco Tornero-Aguilera
Metabolites.2024; 14(10): 549. CrossRef - Graph Convolutional Neural Network with Multi-Layer Attention Mechanism for Predicting Potential Microbe-Disease Associations
Lei Wang, Xiaoyu Yang, Linai Kuang, Zhen Zhang, Bin Zeng, Zhiping Chen
Current Bioinformatics.2023; 18(6): 497. CrossRef - Evaluation of the Effects of Instant Cascara Beverage on the Brain-Gut Axis of Healthy Male and Female Rats
Paula Gallego-Barceló, Ana Bagues, David Benítez-Álvarez, Yolanda López-Tofiño, Carlos Gálvez-Robleño, Laura López-Gómez, María Dolores del Castillo, Raquel Abalo
Nutrients.2023; 16(1): 65. CrossRef - MADGAN:A microbe-disease association prediction model based on generative adversarial networks
Weixin Hu, Xiaoyu Yang, Lei Wang, Xianyou Zhu
Frontiers in Microbiology.2023;[Epub] CrossRef - Inflammation, Lifestyle Factors, and the Microbiome‐Gut‐Brain Axis: Relevance to Depression and Antidepressant Action
Francisco Donoso, John F. Cryan, Loreto Olavarría‐Ramírez, Yvonne M. Nolan, Gerard Clarke
Clinical Pharmacology & Therapeutics.2023; 113(2): 246. CrossRef - Probiotics as functional foods: How probiotics can alleviate the symptoms of neurological disabilities
Shadi Aghamohammad, Asal Hafezi, Mahdi Rohani
Biomedicine & Pharmacotherapy.2023; 163: 114816. CrossRef - Analysis of the spinal and vagal afferent innervation of the mouse colon using neuronal retrograde tracers
Samira Osman, Ayssar Tashtush, David E. Reed, Alan E. Lomax
Cell and Tissue Research.2023; 392(3): 659. CrossRef - Impact of probiotics on cognition and constipation in the elderly: A meta-analysis
Neeraja Recharla, Jihee Choi, Pradeep Puligundla, Seon-Joo Park, Hae-Jeung Lee
Heliyon.2023; 9(7): e18306. CrossRef - Microbial Reprogramming in Obsessive–Compulsive Disorders: A Review of Gut–Brain Communication and Emerging Evidence
Ghizlane Bendriss, Ross MacDonald, Clare McVeigh
International Journal of Molecular Sciences.2023; 24(15): 11978. CrossRef - Lactic acid bacteria in relieving constipation: mechanism, clinical application, challenge, and opportunity
Tong Zhang, Wenxu Liu, Huimin Lu, Ting Cheng, Linlin Wang, Gang Wang, Hao Zhang, Wei Chen
Critical Reviews in Food Science and Nutrition.2023; : 1. CrossRef - The Role of Bifidobacterium bifidum novaBBF7, Bifidobacterium longum novaBLG2 and Lactobacillus paracasei TJB8 to Improve Mechanisms Linked to Neuronal Cells Protection against Oxidative Condition in a Gut-Brain Axis Model
Sara Ferrari, Rebecca Galla, Simone Mulè, Giorgia Rosso, Arianna Brovero, Valentina Macchi, Sara Ruga, Francesca Uberti
International Journal of Molecular Sciences.2023; 24(15): 12281. CrossRef - A Review on the Protective Effects of Probiotics against Alzheimer’s Disease
Vibhuti Mishra, Dhananjay Yadav, Kavita Singh Solanki, Bhupendra Koul, Minseok Song
Biology.2023; 13(1): 8. CrossRef - Ingestion of Lacticaseibacillus rhamnosus Fmb14 prevents depression-like behavior and brain neural activity via the microbiota–gut–brain axis in colitis mice
Hongyuan Zhao, Xiaoyu Chen, Li Zhang, Chao Tang, Fanqiang Meng, Libang Zhou, Ping Zhu, Zhaoxin Lu, Yingjian Lu
Food & Function.2023; 14(4): 1909. CrossRef - Intake of Lactiplantibacillus plantarum HEAL9 Improves Cognition in Moderately Stressed Subjects: A Randomized Controlled Study
Gunilla Önning, Caroline Montelius, Magnus Hillman, Niklas Larsson
Nutrients.2023; 15(15): 3466. CrossRef - Gut microbiota in perioperative neurocognitive disorders: current evidence and future directions
Yan Sun, Kexin Wang, Weiliang Zhao
Frontiers in Immunology.2023;[Epub] CrossRef -
Lactiplantibacillus plantarum
as a promising adjuvant for neurological disorders therapy through the brain-gut axis and related action pathways
Josilaene Duarte Luiz, Cynthia Manassi, Marciane Magnani, Adriano Gomes da Cruz, Tatiana Colombo Pimentel, Silvani Verruck
Critical Reviews in Food Science and Nutrition.2023; : 1. CrossRef - 'The Mecca of the Economist Lies in Economic Microbiology': Microbes as Economic Agents and Decision-Makers
Nicola Luigi Bragazzi, Anna Siri
SSRN Electronic Journal.2023;[Epub] CrossRef - Protective effects of enzymatic hydrolysis products of pomelo peel cellulose on Lactobacillus plantarum during freeze-drying process
Congcong Peng, Bingjie Liu, Zhong Chen
Applied Food Research.2023; 3(1): 100301. CrossRef - IgA-Biome Profiles Correlate with Clinical Parkinson’s Disease Subtypes
Eric L. Brown, Heather T. Essigmann, Kristi L. Hoffman, Ashley S. Alexander, Michael Newmark, Zhi-Dong Jiang, Jessika Suescun, Mya C. Schiess, Craig L. Hanis, Herbert L. DuPont
Journal of Parkinson’s Disease.2023; 13(4): 501. CrossRef - Psychobiotics: Are they the future intervention for managing depression and anxiety? A literature review
Kim Ross
EXPLORE.2023; 19(5): 669. CrossRef - Potential associations between organic dairy products, gut microbiome, and gut health: A review
Anna Elizabeth Wittwer, Simon Gardner Lee, Chaminda Senaka Ranadheera
Food Research International.2023; 172: 113195. CrossRef -
Bifidobacterium
spp. as functional foods: A review of current status, challenges, and strategies
Bao-Lin He, Yong Xiong, Teng-Gen Hu, Min-Hua Zong, Hong Wu
Critical Reviews in Food Science and Nutrition.2023; 63(26): 8048. CrossRef - Probiotics in Periodontal and Peri-Implant Health Management: Biofilm Control, Dysbiosis Reversal, and Host Modulation
Massimo Amato, Federica Di Spirito, Francesco D’Ambrosio, Giovanni Boccia, Giuseppina Moccia, Francesco De Caro
Microorganisms.2022; 10(11): 2289. CrossRef - Targeting the MGBA with -biotics in epilepsy: New insights from preclinical and clinical studies
Antonella Riva, Elisa Pozzati, Mattia Grasso, Carmen De Caro, Emilio Russo, Alberto Verrotti, Pasquale Striano
Neurobiology of Disease.2022; 170: 105758. CrossRef - Folate and vitamin B-12 deficiencies additively impaire memory function and disturb the gut microbiota in amyloid-β infused rats
Sunmin Park, Sunna Kang, Da Sol Kim
International Journal for Vitamin and Nutrition Research.2022; 92(3-4): 169. CrossRef - Intestinal Barrier Function and Immune Homeostasis Are Missing Links in Obesity and Type 2 Diabetes Development
Sylvia Riedel, Carmen Pheiffer, Rabia Johnson, Johan Louw, Christo J. F. Muller
Frontiers in Endocrinology.2022;[Epub] CrossRef - Are We What We Eat? Impact of Diet on the Gut–Brain Axis in Parkinson’s Disease
Margherita Alfonsetti, Vanessa Castelli, Michele d’Angelo
Nutrients.2022; 14(2): 380. CrossRef - Role of Gut Microbiome in Autism Spectrum Disorder and Its Therapeutic Regulation
Masuma Afrin Taniya, Hea-Jong Chung, Abdullah Al Mamun, Safaet Alam, Md. Abdul Aziz, Nazim Uddin Emon, Md. Minarul Islam, Seong-T shool Hong, Bristy Rani Podder, Anjuman Ara Mimi, Suzia Aktar Suchi, Jian Xiao
Frontiers in Cellular and Infection Microbiology.2022;[Epub] CrossRef - Fate of dietary phytochemicals in human gut and interaction with intestinal flora
Bin Du, Zilong Ma, Guang Xin, Yuedong Yang, Baojun Xu
Journal of Food Bioactives.2022; : 43. CrossRef - Expression of the Antimicrobial Peptide Piscidin 1 and Neuropeptides in Fish Gill and Skin: A Potential Participation in Neuro-Immune Interaction
Giacomo Zaccone, Gioele Capillo, Jorge Manuel Oliveira Fernandes, Viswanath Kiron, Eugenia Rita Lauriano, Alessio Alesci, Patrizia Lo Cascio, Maria Cristina Guerrera, Michal Kuciel, Krystyna Zuwala, Jose Manuel Icardo, Atsushi Ishimatsu, Ryosuke Murata, T
Marine Drugs.2022; 20(2): 145. CrossRef - Impact of protectant uptake on the shelf-life of dried Lacticaseibacillus rhamnosus
Sarah Priour, Alan Welman, Harjinder Singh, Ashling Ellis
LWT.2022; 153: 112394. CrossRef - What do experimental animal models of mood disorders tell clinicians about influence of probiotics on the gut-brain axis?
Natasza Staniak, Ewa Piaseczna-Spitaleri, Grażyna Biała
Postępy Higieny i Medycyny Doświadczalnej.2022; 76(1): 380. CrossRef - Memory improvement in senile rats after prebiotic and probiotic supplementation is not induced by GLP‐1
Gabriela Andrea Servín‐Casas, Alejandra Romo‐Araiza, Gabriela Gutierrez‐Salmean, Enrique Martinez‐Solis, Andrea Paola Ibarra‐García, Yolanda Cruz‐Martinez, Roxana Rodriguez‐Barrera, Elisa García, Diego Incontri‐Abraham, Antonio Ibarra
CNS Neuroscience & Therapeutics.2022; 28(12): 1986. CrossRef - Microbiota alteration and modulation in Alzheimer's disease by gerobiotics: The gut-health axis for a good mind
Duygu Ağagündüz, Betül Kocaadam-Bozkurt, Osman Bozkurt, Heena Sharma, Renata Esposito, Fatih Özoğul, Raffaele Capasso
Biomedicine & Pharmacotherapy.2022; 153: 113430. CrossRef - Influence of 2′-Fucosyllactose and Bifidobacterium longum Subspecies infantis Supplementation on Cognitive and Structural Brain Development in Young Pigs
Loretta T. Sutkus, Sangyun Joung, Johanna Hirvonen, Henrik Max Jensen, Arthur C. Ouwehand, Ratna Mukherjea, Sharon M. Donovan, Ryan N. Dilger
Frontiers in Neuroscience.2022;[Epub] CrossRef - Lactobacillus plantarum-derived postbiotics prevent Salmonella-induced neurological dysfunctions by modulating gut–brain axis in mice
Yanping Wu, Yan Wang, Aixin Hu, Xin Shu, Wenxia Huang, Jinsong Liu, Baikui Wang, Ruiqiang Zhang, Min Yue, Caimei Yang
Frontiers in Nutrition.2022;[Epub] CrossRef - THE NEGATIVE EFFECT OF PARKINSON'S DISEASE ON THE PATIENT'S PSYCHOLOGICAL AND SOCIAL WELL-BEING
Jana Lauková, Mária Šupínová, Zuzana Frčová, Elena Janiczeková, Denisa Ivaničová, Júlia Jankovičová
Ošetřovatelské perspektivy.2022; 5(2): 97. CrossRef - Effects of different probiotic strains B. lactis, L. rhamnosus and L. reuteri on brain-intestinal axis immunomodulation in an endotoxin-induced inflammation
Monique Michels, Gabriel Fernandes Alves Jesus, Mariane Rocha Abatti, Emily Córneo, Luana Cucker, Heloisa de Medeiros Borges, Natan da Silva Matos, Luana Bezerra Rocha, Rodrigo Dias, Carla Sasso Simon, Ana Paula Lorenzen Voytena, Marina Rossetto, Fernanda
Molecular Neurobiology.2022; 59(8): 5168. CrossRef - The Therapeutic Role of Ketogenic Diet in Neurological Disorders
Diana Pietrzak, Kamila Kasperek, Paweł Rękawek, Iwona Piątkowska-Chmiel
Nutrients.2022; 14(9): 1952. CrossRef - Gut biofilms:Bacteroidesas model symbionts to study biofilm formation by intestinal anaerobes
Nathalie Béchon, Jean-Marc Ghigo
FEMS Microbiology Reviews.2022;[Epub] CrossRef - Gut microbiota in anxiety and depression: Pathogenesis and therapeutics
Stefano Bibbò, Salvatore Fusco, Gianluca Ianiro, Carlo Romano Settanni, Daniele Ferrarese, Claudio Grassi, Giovanni Cammarota, Antonio Gasbarrini
Frontiers in Gastroenterology.2022;[Epub] CrossRef - The Efficacy of S-Adenosyl Methionine and Probiotic Supplementation on Depression: A Synergistic Approach
Hammad Ullah, Ayesha Khan, Kannan R. R. Rengasamy, Alessandro Di Minno, Roberto Sacchi, Maria Daglia
Nutrients.2022; 14(13): 2751. CrossRef - Recent Advances in Understanding the Structure and Function of the Human Microbiome
Walaa K. Mousa, Fadia Chehadeh, Shannon Husband
Frontiers in Microbiology.2022;[Epub] CrossRef - Does Multi-Strain Probiotic Supplementation Impact the Effort Capacity of Competitive Road Cyclists?
Paulina Mazur-Kurach, Barbara Frączek, Andrzej T. Klimek
International Journal of Environmental Research and Public Health.2022; 19(19): 12205. CrossRef - Horizons in Human Aging Neuroscience: From Normal Neural Aging to Mental (Fr)Agility
K. Richard Ridderinkhof, Harm J. Krugers
Frontiers in Human Neuroscience.2022;[Epub] CrossRef - Intestinal microbiome and modern methods of its study in children
G. V. Volynets, A. V. Nikitin, T. A. Skvortsova
Rossiyskiy Vestnik Perinatologii i Pediatrii (Russian Bulletin of Perinatology and Pediatrics).2022; 67(4): 5. CrossRef - Active Machine learning for formulation of precision probiotics
Laura E. McCoubrey, Nidhi Seegobin, Moe Elbadawi, Yiling Hu, Mine Orlu, Simon Gaisford, Abdul W. Basit
International Journal of Pharmaceutics.2022; 616: 121568. CrossRef - INTERVENÇÃO COM PROBIÓTICOS EM CRIANÇAS COM AUTISMO ASSOCIADO À SINTOMAS GASTROINTESTINAIS
Pedro Ferreira Paiva Filho, Tiago Bezerra de Sá de Sousa Nogueira, Raquel Bezerra de Sá de Sousa Nogueira
Revista Contemporânea.2022; 2(3): 287. CrossRef - Changes in Gut Microbiota by the Lactobacillus casei Anchoring the K88 Fimbrial Protein Prevented Newborn Piglets From Clinical Diarrhea
Da Qin, Yongfei Bai, Yan Li, Yanmei Huang, Liyang Li, Guihua Wang, Yi Qu, Jiabin Wang, Li-Yun Yu, Xilin Hou
Frontiers in Cellular and Infection Microbiology.2022;[Epub] CrossRef - The gut microbiota as a biomarker in epilepsy
Emilio Russo
Neurobiology of Disease.2022; 163: 105598. CrossRef - Eating Fermented: Health Benefits of LAB-Fermented Foods
Vincenzo Castellone, Elena Bancalari, Josep Rubert, Monica Gatti, Erasmo Neviani, Benedetta Bottari
Foods.2021; 10(11): 2639. CrossRef - Interactions between probiotic and oral pathogenic strains
Noémi N. Gönczi, Orsolya Strang, Zoltán Bagi, Gábor Rákhely, Kornél L. Kovács
Biologia Futura.2021; 72(4): 461. CrossRef - Knowledge, patterns of consumption, and attitudes of patients with major depression disorders toward probiotics
Abdulrahman Ismaeel Janahi, Iman Fahmi Mahmoud, Ibrahim Mohammed Al Alhareth, Alaa Yousef Alnakhli, Sara Nasser Almisrea, Hadel Mohammed Aljohani, Omar A. Alhaj, Adla Bakri Hassan, Haitham Jahrami
Nutrition & Food Science
.2021; 51(8): 1258. CrossRef - The brain–gut axis, inflammatory bowel disease and bioelectronic medicine
Michael Eberhardson, Yaakov A Levine, Laura Tarnawski, Peder S Olofsson
International Immunology.2021; 33(6): 349. CrossRef - Identifying Microbe-Disease Association Based on a Novel Back-Propagation Neural Network Model
Hao Li, Yuqi Wang, Zhen Zhang, Yihong Tan, Zhiping Chen, Xiangyi Wang, Tingrui Pei, Lei Wang
IEEE/ACM Transactions on Computational Biology and Bioinformatics.2021; 18(6): 2502. CrossRef - The Murine Reg3a Stimulated by Lactobacillus casei Promotes Intestinal Cell Proliferation and Inhibits the Multiplication of Porcine Diarrhea Causative Agent in vitro
Yongfei Bai, Yanmei Huang, Ying Li, Bingbing Zhang, Cuihong Xiao, Xilin Hou, Liyun Yu
Frontiers in Microbiology.2021;[Epub] CrossRef - Probiotics: Not just good for the gut but for the brain too
Sanjiv Mahadeva
JGH Open.2021; 5(4): 413. CrossRef - Impact of Gut Microbiome Lactobacillus spp. in Brain Function and its Medicament towards Alzheimer’s Disease Pathogenesis
Shani Kunjamma John, Vani Chandrapragasam, Pinaki Dey
Journal of Pure and Applied Microbiology.2021; 15(3): 1029. CrossRef - A Randomized Controlled Trial of the Efficacy of Systemic Enzymes and Probiotics in the Resolution of Post-COVID Fatigue
Abhijit Rathi, Swati B. Jadhav, Neha Shah
Medicines.2021; 8(9): 47. CrossRef - Microbiota shaping — the effects of probiotics, prebiotics, and fecal microbiota transplant on cognitive functions: A systematic review
Simone Baldi, Tiziana Mundula, Giulia Nannini, Amedeo Amedei
World Journal of Gastroenterology.2021; 27(39): 6715. CrossRef - New Avenues for Parkinson’s Disease Therapeutics: Disease-Modifying Strategies Based on the Gut Microbiota
Marina Lorente-Picón, Ariadna Laguna
Biomolecules.2021; 11(3): 433. CrossRef - Probiotics for Parkinson's disease: Current evidence and future directions
Ai Huey Tan, Jia Wei Hor, Chun Wie Chong, Shen‐Yang Lim
JGH Open.2021; 5(4): 414. CrossRef - The emerging role of probiotics in neurodegenerative diseases: new hope for Parkinson’s disease?
Vanessa Castelli, Michele d'Angelo, Massimiliano Quintiliani, Elisabetta Benedetti, MariaGrazia Cifone, Annamaria Cimini
Neural Regeneration Research.2021; 16(4): 628. CrossRef - Gut mucosal and adipose tissues as health targets of the immunomodulatory mechanisms of probiotics
Tolulope Joshua Ashaolu, Samuel Fernández-Tomé
Trends in Food Science & Technology.2021; 112: 764. CrossRef - Microbiota intestinal: el órgano olvidado
José Alfonso Merino Rivera, Santiago Taracena Pacheco, Enrique Juan Díaz Greene, Federico Leopoldo Rodríguez Weber
Acta Médica Grupo Ángeles.2021; 19(1): 92. CrossRef - Gut microbiota–brain axis in depression: The role of neuroinflammation
Anelise S. Carlessi, Laura A. Borba, Alexandra I. Zugno, João Quevedo, Gislaine Z. Réus
European Journal of Neuroscience.2021; 53(1): 222. CrossRef - Dietary strategies may influence human nerves and emotions by regulating intestinal microbiota: an interesting hypothesis
Mengyu Hong, Chi‐Tang Ho, Xin Zhang, Ruilin Zhang, Yanan Liu
International Journal of Food Science & Technology.2021; 56(7): 3311. CrossRef - Probiotics Regulate Gut Microbiota: An Effective Method to Improve Immunity
Xinzhou Wang, Peng Zhang, Xin Zhang
Molecules.2021; 26(19): 6076. CrossRef - CBC‐Clock Theory of Life – Integration of cellular circadian clocks and cellular sentience is essential for cognitive basis of life
František Baluška, Arthur S. Reber
BioEssays.2021;[Epub] CrossRef - Gut-Derived Protein-Bound Uremic Toxins
Amanda L. Graboski, Matthew R. Redinbo
Toxins.2020; 12(9): 590. CrossRef - CD103 Deficiency Promotes Autism (ASD) and Attention-Deficit Hyperactivity Disorder (ADHD) Behavioral Spectra and Reduces Age-Related Cognitive Decline
Michelle Jhun, Akanksha Panwar, Ryan Cordner, Dwain K. Irvin, Lucia Veiga, Nicole Yeager, Robert N. Pechnick, Hanna Schubloom, Keith L. Black, Christopher J. Wheeler
Frontiers in Neurology.2020;[Epub] CrossRef - Gut Microbiota, Probiotics and Physical Performance in Athletes and Physically Active Individuals
Maija Marttinen, Reeta Ala-Jaakkola, Arja Laitila, Markus J. Lehtinen
Nutrients.2020; 12(10): 2936. CrossRef - Association of chronic spinal pain with diet quality
Suzanna Maria Zick, Susan Lynn Murphy, Justin Colacino
PAIN Reports.2020; 5(5): e837. CrossRef - The Gut Microbiota and Its Implication in the Development of Atherosclerosis and Related Cardiovascular Diseases
Estefania Sanchez-Rodriguez, Alejandro Egea-Zorrilla, Julio Plaza-Díaz, Jerónimo Aragón-Vela, Sergio Muñoz-Quezada, Luis Tercedor-Sánchez, Francisco Abadia-Molina
Nutrients.2020; 12(3): 605. CrossRef - The potential role of interventions impacting on gut-microbiota in epilepsy
Luigi F Iannone, Maria Gómez-Eguílaz, Rita Citaro, Emilio Russo
Expert Review of Clinical Pharmacology.2020; 13(4): 423. CrossRef - Parkinson’s disease and the gastrointestinal microbiome
Michal Lubomski, Ai Huey Tan, Shen-Yang Lim, Andrew J. Holmes, Ryan L. Davis, Carolyn M. Sue
Journal of Neurology.2020; 267(9): 2507. CrossRef - Nutraceuticals as modulators of gut microbiota: Role in therapy
Eamonn M.M. Quigley
British Journal of Pharmacology.2020; 177(6): 1351. CrossRef - Effects of the probiotic formulation SLAB51 in in vitro and in vivo Parkinson’s disease models
Vanessa Castelli, Michele d’Angelo, Francesca Lombardi, Margherita Alfonsetti, Andrea Antonosante, Mariano Catanesi, Elisabetta Benedetti, Paola Palumbo, Maria Grazia Cifone, Antonio Giordano, Giovambattista Desideri, Annamaria Cimini
Aging.2020; 12(5): 4641. CrossRef - Recent advances in modulating the microbiome
Eamonn M.M Quigley, Prianka Gajula
F1000Research.2020; 9: 46. CrossRef - Protease‐dependent excitation of nodose ganglion neurons by commensal gut bacteria
Sabindra Pradhananga, Ayssar A. Tashtush, Emma Allen‐Vercoe, Elaine O. Petrof, Alan E. Lomax
The Journal of Physiology.2020; 598(11): 2137. CrossRef - Probiotics Alleviate the Progressive Deterioration of Motor Functions in a Mouse Model of Parkinson’s Disease
Tsung-Hsun Hsieh, Chi-Wei Kuo, Kai-Hsuan Hsieh, Meng-Jyh Shieh, Chih-Wei Peng, Yen-Chien Chen, Ying-Ling Chang, Ying-Zu Huang, Chih-Chung Chen, Pi-Kai Chang, Kai-Yun Chen, Hsin-Yung Chen
Brain Sciences.2020; 10(4): 206. CrossRef - Activity of five antimicrobial peptides against periodontal as well as non-periodontal pathogenic strains
Katharina Enigk, Holger Jentsch, Arne C. Rodloff, Klaus Eschrich, Catalina-Suzana Stingu
Journal of Oral Microbiology.2020; 12(1): 1829405. CrossRef - Fermentation revival in the classroom: investigating ancient human practices as CUREs for modern diseases
Jennifer K Lyles, Monika Oli
FEMS Microbiology Letters.2020;[Epub] CrossRef - Behavioural and brain ultrastructural changes following the systemic administration of propionic acid in adolescent male rats. Further development of a rodent model of autism
Giorgi Lobzhanidze, Nadezhda Japaridze, Tamar Lordkipanidze, Fuad Rzayev, Derrick MacFabe, Mzia Zhvania
International Journal of Developmental Neuroscience.2020; 80(2): 139. CrossRef - Possible links between gut–microbiota and attention-deficit/hyperactivity disorders in children and adolescents
Nonglak Boonchooduang, Orawan Louthrenoo, Nipon Chattipakorn, Siriporn C. Chattipakorn
European Journal of Nutrition.2020; 59(8): 3391. CrossRef - Bacillus Subtilis Delays Neurodegeneration and Behavioral Impairment in the Alzheimer’s Disease Model Caenorhabditis Elegans
Sebastián Cogliati, Victoria Clementi, Marcos Francisco, Cira Crespo, Federico Argañaraz, Roberto Grau
Journal of Alzheimer's Disease.2020; 73(3): 1035. CrossRef - Urinary carboxylic acids (UCAs) in subjects with autism spectrum disorder and their association with bacterial overgrowth
Paulina Gątarek, Jagoda Jóźwik-Pruska, Geir Bjørklund, Salvatore Chirumbolo, Joanna Kałużna-Czaplińska
Reviews in Analytical Chemistry.2020; 39(1): 78. CrossRef - Intake of Lactiplantibacillus plantarum HEAL9 reduces the inflammatory markers soluble fractalkine and CD163 during acute stress: A randomized, double blind, placebo-controlled study
Gunilla Önning, Magnus Hillman, Maria Hedin, Caroline Montelius, Joakim Eriksson, Siv Ahrné, Peter Jönsson
Physiology & Behavior.2020; 225: 113083. CrossRef - Non-alcoholic fatty liver disease (NAFLD) as a neglected metabolic companion of psychiatric disorders: common pathways and future approaches
Óscar Soto-Angona, Gerard Anmella, María José Valdés-Florido, Nieves De Uribe-Viloria, Andre F. Carvalho, Brenda W. J. H. Penninx, Michael Berk
BMC Medicine.2020;[Epub] CrossRef - Exploiting the gut microbiota’s fermentation capabilities towards disease prevention
Thomas Gurry, Leonardo Scapozza
Journal of Pharmaceutical and Biomedical Analysis.2020; 189: 113469. CrossRef - The Promising Role of Probiotics in Managing the Altered Gut in Autism Spectrum Disorders
Basma Abdellatif, Clare McVeigh, Ghizlane Bendriss, Ali Chaari
International Journal of Molecular Sciences.2020; 21(11): 4159. CrossRef - Gut feeling: randomized controlled trials of probiotics for the treatment of clinical depression: Systematic review and meta-analysis
Viktoriya Nikolova, Syed Yawar Zaidi, Allan H. Young, Anthony J. Cleare, James M. Stone
Therapeutic Advances in Psychopharmacology.2019;[Epub] CrossRef - Probiotics and prebiotics in intestinal health and disease: from biology to the clinic
Mary Ellen Sanders, Daniel J. Merenstein, Gregor Reid, Glenn R. Gibson, Robert A. Rastall
Nature Reviews Gastroenterology & Hepatology.2019; 16(10): 605. CrossRef - Probiotics mixture increases butyrate, and subsequently rescues the nigral dopaminergic neurons from MPTP and rotenone-induced neurotoxicity
Sunil Srivastav, Sabita Neupane, Sunil Bhurtel, Nikita Katila, Sailesh Maharjan, Hyukjae Choi, Jin Tae Hong, Dong-Young Choi
The Journal of Nutritional Biochemistry.2019; 69: 73. CrossRef - Lactobacillus plantarum PS128 ameliorates 2,5-Dimethoxy-4-iodoamphetamine-induced tic-like behaviors via its influences on the microbiota–gut-brain-axis
Jian-Fu Liao, Yun-Fang Cheng, Shiao-Wen Li, Wang-Tso Lee, Chih-Chieh Hsu, Chien-Chen Wu, One-Jang Jeng, Sabrina Wang, Ying-Chieh Tsai
Brain Research Bulletin.2019; 153: 59. CrossRef - Gut microbiota in ALS: possible role in pathogenesis?
Pamela A. McCombe, Robert D. Henderson, Aven Lee, John D. Lee, Trent M. Woodruff, Restuadi Restuadi, Allan McRae, Naomi R. Wray, Shyuan Ngo, Frederik J. Steyn
Expert Review of Neurotherapeutics.2019; 19(9): 785. CrossRef - Could probiotics be the panacea alternative to the use of antimicrobials in livestock diets?
A. Cameron, T.A. McAllister
Beneficial Microbes.2019; 10(7): 773. CrossRef - Probiotic mixture of Lactobacillus helveticus R0052 and Bifidobacterium longum R0175 attenuates hippocampal apoptosis induced by lipopolysaccharide in rats
Ghazaleh Mohammadi, Leila Dargahi, Taghi Naserpour, Yazdan Mirzanejad, Safar Ali Alizadeh, Amir Peymani, Marjan Nassiri-Asl
International Microbiology.2019; 22(3): 317. CrossRef - Purging and the body in the therapeutic use of ayahuasca
Evgenia Fotiou, Alex K. Gearin
Social Science & Medicine.2019; 239: 112532. CrossRef - Nutritional Modulation of Immune and Central Nervous System Homeostasis: The Role of Diet in Development of Neuroinflammation and Neurological Disease
José Antonio Estrada, Irazú Contreras
Nutrients.2019; 11(5): 1076. CrossRef - Ice cream as a carrier of Lactobacillus acidophilus
Светлана Рябцева, Svetlana Ryabtseva, Валида Ахмедова, Valida Akhmedova, Георгий Анисимов, Georgiy Anisimov
Food Processing: Techniques and Technology.2019; 48(2): 5. CrossRef - Impact of Gut Dysbiosis on Neurohormonal Pathways in Chronic Kidney Disease
Nima H. Jazani, Javad Savoj, Michael Lustgarten, Wei Ling Lau, Nosratola D. Vaziri
Diseases.2019; 7(1): 21. CrossRef - Social amoebae establish a protective interface with their bacterial associates by lectin agglutination
Timothy Farinholt, Christopher Dinh, Adam Kuspa
Science Advances.2019;[Epub] CrossRef - Probiotics in Food Systems: Significance and Emerging Strategies Towards Improved Viability and Delivery of Enhanced Beneficial Value
Antonia Terpou, Aikaterini Papadaki, Iliada Lappa, Vasiliki Kachrimanidou, Loulouda Bosnea, Nikolaos Kopsahelis
Nutrients.2019; 11(7): 1591. CrossRef - Gut–brain axis in the executive function of austism spectrum disorder
Pablo Roman, Lola Rueda-Ruzafa, Diana Cardona, Alda Cortes-Rodríguez
Behavioural Pharmacology.2018; 29(7): 654. CrossRef - One Health, Fermented Foods, and Gut Microbiota
Victoria Bell, Jorge Ferrão, Lígia Pimentel, Manuela Pintado, Tito Fernandes
Foods.2018; 7(12): 195. CrossRef - Gut microbiomes and their metabolites shape human and animal health
Woojun Park
Journal of Microbiology.2018; 56(3): 151. CrossRef - Microbiota in the Gastrointestinal Tract
Walburga Dieterich, Monic Schink, Yurdagül Zopf
Medical Sciences.2018; 6(4): 116. CrossRef - What Is the Evidence that Parkinson’s Disease Is a Prion Disorder, Which Originates in the Gut?
Małgorzata Kujawska, Jadwiga Jodynis-Liebert
International Journal of Molecular Sciences.2018; 19(11): 3573. CrossRef - Early Disruption of the Microbiome Leading to Decreased Antioxidant Capacity and Epigenetic Changes: Implications for the Rise in Autism
Rebecca S. Eshraghi, Richard C. Deth, Rahul Mittal, Mayank Aranke, Sae-In S. Kay, Baharak Moshiree, Adrien A. Eshraghi
Frontiers in Cellular Neuroscience.2018;[Epub] CrossRef - The intestinal microbiome and Alzheimer's disease: A review
Zhuo Li, Hua Zhu, Ling Zhang, Chuan Qin
Animal Models and Experimental Medicine.2018; 1(3): 180. CrossRef
- REVIEW] Mechanisms of Synergy in Polymicrobial Infections
-
Justine L. Murray , Jodi L. Connell , Apollo Stacy , Keith H. Turner , Marvin Whiteley
-
J. Microbiol. 2014;52(3):188-199. Published online March 1, 2014
-
DOI: https://doi.org/10.1007/s12275-014-4067-3
-
-
49
View
-
0
Download
-
124
Crossref
-
Abstract
-
Communities of microbes can live almost anywhere and contain many different species. Interactions between members of these communities often determine the state of the habitat in which they live. When these habitats include sites on the human body, these interactions can affect health and disease. Polymicrobial synergy can occur during infection, in which the combined effect of two or more microbes on disease is worse than seen with any of the individuals alone.
Powerful genomic methods are increasingly used to study microbial communities, including metagenomics to reveal the members and genetic content of a community and metatranscriptomics to describe the activities of community members. Recent efforts focused toward a mechanistic understanding of these interactions have led to a better appreciation of the precise bases of polymicrobial synergy in communities
containing bacteria, eukaryotic microbes, and/or viruses. These studies have benefited from advances in the development of in vivo models of polymicrobial infection and modern techniques to profile the spatial and chemical bases of intermicrobial communication. This review describes the breadth of mechanisms microbes use to interact in ways that impact pathogenesis and techniques to study polymicrobial communities.
-
Citations
Citations to this article as recorded by

- Lethal synergistic infections by two concurrent respiratory pathogens
Kevin Roe
Archives of Medical Research.2025; 56(1): 103101. CrossRef - Microbial interactions impact stress tolerance in a model oral community
Gina R. Lewin, Emma R. Evans, Marvin Whiteley, Varsha Singh
Microbiology Spectrum.2024;[Epub] CrossRef - Interactions between Pseudomonas aeruginosa and six opportunistic pathogens cover a broad spectrum from mutualism to antagonism
Clémentine Laffont, Tobias Wechsler, Rolf Kümmerli
Environmental Microbiology Reports.2024;[Epub] CrossRef - Convergent evolution in toxin detection and resistance provides evidence for conserved bacterial–fungal interactions
Stephen K. Dolan, Ashley T. Duong, Marvin Whiteley
Proceedings of the National Academy of Sciences.2024;[Epub] CrossRef - From Global to Nano: A Geographical Perspective of Aggregatibacter actinomycetemcomitans
Mark I. Ryder, Daniel H. Fine, Annelise E. Barron
Pathogens.2024; 13(10): 837. CrossRef - Maggots in Medicine: A Narrative Review Discussing the Barriers to Maggot Debridement Therapy and Its Utilisation in the Treatment of Chronic Wounds
Zoe Mumford, Yamni Nigam
Journal of Clinical Medicine.2024; 13(22): 6746. CrossRef - The exometabolome as a hidden driver of bacterial virulence and pathogenesis
Saurabh Chugh, Fabien Létisse, Olivier Neyrolles
Trends in Microbiology.2024;[Epub] CrossRef - Relationship between vaginal and oral microbiome in patients of human papillomavirus (HPV) infection and cervical cancer
Wei Zhang, Yanfei Yin, Yisha Jiang, Yangyang Yang, Wentao Wang, Xiaoya Wang, Yan Ge, Bin Liu, Lihe Yao
Journal of Translational Medicine.2024;[Epub] CrossRef - Interplay of virulence factors shapes ecology and treatment outcomes in polymicrobial infections
C. Herzberg, E.N. van Meegen, J.G.C. van Hasselt
Mathematical Biosciences.2024; 377: 109293. CrossRef -
Ultrastructural polymicrobial
Staphylococcus aureus–Pseudomonas aeruginosa
interactions and antimicrobial resistance in
ex vivo
cornea model
Sanchita Mitra, Nagapriya Banka, Soumyava Basu, Tirupathi Rao
Future Microbiology.2024; : 1. CrossRef - Competitive inhibition and mutualistic growth in co-infections: deciphering Staphylococcus aureus–Acinetobacter baumannii interaction dynamics
Sandra Timme, Sindy Wendler, Tilman E Klassert, Joao Pedro Saraiva, Ulisses Nunes da Rocha, Manuel Wittchen, Sareda Schramm, Ralf Ehricht, Stefan Monecke, Birgit Edel, Jürgen Rödel, Bettina Löffler, Maria Soledad Ramirez, Hortense Slevogt, Marc Thilo Figg
ISME Communications.2024;[Epub] CrossRef - Bacterial community diversity, abundance, and composition of rearing water and red tilapia gills from open river cages and earthen ponds in Central Thailand
Geraldine B. Dayrit, Mahmoud Mabrok, Sage Chaiyapechara, Channarong Rodkhum
Aquaculture International.2024; 32(6): 7509. CrossRef - Molecular commensalism—how to investigate underappreciated health-associated polymicrobial communities
Alex Labossiere, Matthew Ramsey, Justin Merritt, Jens Kreth, Jacob Yount, Jessica A. Scoffield
mBio.2023;[Epub] CrossRef - Larval Therapy and Larval Excretions/Secretions: A Potential Treatment for Biofilm in Chronic Wounds? A Systematic Review
Daniel Morris, Micah Flores, Llinos Harris, John Gammon, Yamni Nigam
Microorganisms.2023; 11(2): 457. CrossRef - A core of functional complementary bacteria infects oysters in Pacific Oyster Mortality Syndrome
Camille Clerissi, Xing Luo, Aude Lucasson, Shogofa Mortaza, Julien de Lorgeril, Eve Toulza, Bruno Petton, Jean-Michel Escoubas, Lionel Dégremont, Yannick Gueguen, Delphine Destoumieux-Garzόn, Annick Jacq, Guillaume Mitta
Animal Microbiome.2023;[Epub] CrossRef - Pylephlebitis: A Systematic Review on Etiology, Diagnosis, and Treatment of Infective Portal Vein Thrombosis
Lisa Fusaro, Stefano Di Bella, Paola Martingano, Lory Saveria Crocè, Mauro Giuffrè
Diagnostics.2023; 13(3): 429. CrossRef - Responses of microbial interactions and functional genes to sulfamethoxazole in anammox consortia
Meina Hu, Xiaojing Liu, Shidi Liu, Tao Ya, Minglu Zhang, Tingting Zhang, Xiaoping Gao, Xiaohui Wang
Journal of Environmental Management.2023; 348: 119408. CrossRef - The interactions of SARS-CoV-2 with cocirculating pathogens: Epidemiological implications and current knowledge gaps
Anabelle Wong, Laura Andrea Barrero Guevara, Elizabeth Goult, Michael Briga, Sarah C. Kramer, Aleksandra Kovacevic, Lulla Opatowski, Matthieu Domenech de Cellès, Tom C. Hobman
PLOS Pathogens.2023; 19(3): e1011167. CrossRef - Effect of extracellular levanase SacC from Bacillus subtillis on two–species Staphylococcus aureus – Pseudomonas aeruginosa biofilms
Guzel Mutallapova, Daria Zhuravleva, Airat Kayumov, Elena Trizna, I. Abdullayev, V. Kukhar, E. Akhmetshin, D. Bekjanov, A. Carballo-Penela
E3S Web of Conferences.2023; 449: 07016. CrossRef - Cross-protection and cross-feeding between Klebsiella pneumoniae and Acinetobacter baumannii promotes their co-existence
Lucie Semenec, Amy K. Cain, Catherine J. Dawson, Qi Liu, Hue Dinh, Hannah Lott, Anahit Penesyan, Ram Maharjan, Francesca L. Short, Karl A. Hassan, Ian T. Paulsen
Nature Communications.2023;[Epub] CrossRef - Microbiota and fungal-bacterial interactions in the cystic fibrosis lung
Eneko Santos-Fernandez, Leire Martin-Souto, Aitziber Antoran, Maialen Areitio, Leire Aparicio-Fernandez, Jean-Philippe Bouchara, Carsten Schwarz, Aitor Rementeria, Idoia Buldain, Andoni Ramirez-Garcia
FEMS Microbiology Reviews.2023;[Epub] CrossRef - Defining microbial community functions in chronic human infection with metatranscriptomics
Aanuoluwa E. Adekoya, Hoody A. Kargbo, Carolyn B. Ibberson, Rachel Poretsky
mSystems.2023;[Epub] CrossRef - Illuminating the oral microbiome and its host interactions: tools and approaches for molecular microbiology studies
Justin Merritt, Jens Kreth
FEMS Microbiology Reviews.2023;[Epub] CrossRef - Cooperation and cheating orchestrate Vibrio assemblages and polymicrobial synergy in oysters infected with OsHV-1 virus
Daniel Oyanedel, Arnaud Lagorce, Maxime Bruto, Philippe Haffner, Amandine Morot, Yannick Labreuche, Yann Dorant, Sébastien de La Forest Divonne, François Delavat, Nicolas Inguimbert, Caroline Montagnani, Benjamin Morga, Eve Toulza, Cristian Chaparro, Jean
Proceedings of the National Academy of Sciences.2023;[Epub] CrossRef - Influence of the Type of Bone Cement Used in Two-Stage Exchange Arthroplasty for Chronic Periarticular Joint Infection on the Spacer Replacement and Reinfection Rate
Meng-Wei Chang, Cheng-Ta Wu, Shih-Hsiang Yen, Timothy L. Tan, Po-Chun Lin, Feng-Chih Kuo
Journal of Clinical Medicine.2023; 12(2): 600. CrossRef - Fusobacterium nucleatum Metabolically Integrates Commensals and Pathogens in Oral Biofilms
Akito Sakanaka, Masae Kuboniwa, Shuichi Shimma, Samar A. Alghamdi, Shota Mayumi, Richard J. Lamont, Eiichiro Fukusaki, Atsuo Amano, Heather D. Bean
mSystems.2022;[Epub] CrossRef - Suppurative Thrombosis of the Portal Vein (Pylephlebits): A Systematic Review of Literature
Dorde Jevtic, Tatjana Gavrancic, Ivana Pantic, Terri Nordin, Charles W. Nordstrom, Marina Antic, Nikola Pantic, Marija Kaljevic, Bojan Joksimovic, Milan Jovanovic, Emilia Petcu, Mladen Jecmenica, Tamara Milovanovic, Lawrence Sprecher, Igor Dumic
Journal of Clinical Medicine.2022; 11(17): 4992. CrossRef -
Effect of Polymicrobial Interactions on Antimicrobial Resistance: An
in vitro
Analysis in Human Ocular Infections
Sanchita Mitra, Aparajita Mallick, Shilpa Priyadarshini
Future Microbiology.2022; 17(7): 491. CrossRef -
Precise spatial structure impacts antimicrobial susceptibility of
S. aureus
in polymicrobial wound infections
Carolyn B. Ibberson, Juan P. Barraza, Avery L. Holmes, Pengbo Cao, Marvin Whiteley
Proceedings of the National Academy of Sciences.2022;[Epub] CrossRef - PECULIARITIES OF DISTRIBUTION OF ANTIBIOTIC RESISTANT STRAINS OF E. COLI - E. FAECALIS ASSOCIATION IN THE UROGENITAL TRACT OF PREGNANT WOMEN
Olha S. Voronkova, Maksym V. Lusta, Yuliia S. Voronkova, Yelyzaveta S. Fawzy, Tetiana H. Ostanina
Wiadomości Lekarskie.2022; 75(2): 462. CrossRef - Corncob structures in dental plaque reveal microhabitat taxon specificity
Viviana Morillo-Lopez, Alexandra Sjaarda, Imon Islam, Gary G. Borisy, Jessica L. Mark Welch
Microbiome.2022;[Epub] CrossRef - Polymicrobial Infections and Biofilms: Clinical Significance and Eradication Strategies
V T Anju, Siddhardha Busi, Madangchanok Imchen, Ranjith Kumavath, Mahima S. Mohan, Simi Asma Salim, Pattnaik Subhaswaraj, Madhu Dyavaiah
Antibiotics.2022; 11(12): 1731. CrossRef - Potential Facilitation Between a Commensal and a Pathogenic Microbe in a Wildlife Disease
Franziska C. Sandmeier, Kendra L. Leonard, Chava L. Weitzman, C. Richard Tracy
EcoHealth.2022; 19(3): 427. CrossRef - Increasing the Efficacy of Treatment of Staphylococcus aureus–Candida albicans Mixed Infections with Myrtenol
Ruba Y. Mahmoud, Elena Y. Trizna, Rand K. Sulaiman, Roman S. Pavelyev, Ilmir R. Gilfanov, Svetlana A. Lisovskaya, Olga V. Ostolopovskaya, Larisa L. Frolova, Alexander V. Kutchin, Galina B. Guseva, Elena V. Antina, Mikhail B. Berezin, Liliya E. Nikitina, A
Antibiotics.2022; 11(12): 1743. CrossRef - Bacteriological Studies of Venomous Snakebite Wounds in Hangzhou, Southeast China
Sipin Hu, Zhengqing Lou, Yuchen Shen, Mengyun Tu
The American Journal of Tropical Medicine and Hygiene.2022; 107(4): 925. CrossRef - Environment Constrains Fitness Advantages of Division of Labor in Microbial Consortia Engineered for Metabolite Push or Pull Interactions
Ashley E. Beck, Kathryn Pintar, Diana Schepens, Ashley Schrammeck, Timothy Johnson, Alissa Bleem, Martina Du, William R. Harcombe, Hans C. Bernstein, Jeffrey J. Heys, Tomas Gedeon, Ross P. Carlson, Alejandra Rodríguez-Verdugo, Davide Ciccarese
mSystems.2022;[Epub] CrossRef - Porphyromonas gingivalis Tyrosine Kinase Is a Fitness Determinant in Polymicrobial Infections
John D. Perpich, Lan Yakoumatos, Kendall S. Stocke, Gina R. Lewin, Anayancy Ramos, Deborah R. Yoder-Himes, Marvin Whiteley, Richard J. Lamont, Andreas J. Bäumler
Infection and Immunity.2022;[Epub] CrossRef - Priority effects dictate community structure and alter virulence of fungal-bacterial biofilms
J Z Alex Cheong, Chad J Johnson, Hanxiao Wan, Aiping Liu, John F Kernien, Angela L F Gibson, Jeniel E Nett, Lindsay R Kalan
The ISME Journal.2021; 15(7): 2012. CrossRef - A Pseudomonas aeruginosa Antimicrobial Affects the Biogeography but Not Fitness of Staphylococcus aureus during Coculture
Juan P. Barraza, Marvin Whiteley, Dominique H. Limoli, Michael S. Gilmore
mBio.2021;[Epub] CrossRef - Pseudomonas aeruginosa biofilms and their partners in crime
Maria del Mar Cendra, Eduard Torrents
Biotechnology Advances.2021; 49: 107734. CrossRef - Pseudomonas aeruginosa reverse diauxie is a multidimensional, optimized, resource utilization strategy
S. Lee McGill, Yeni Yung, Kristopher A. Hunt, Michael A. Henson, Luke Hanley, Ross P. Carlson
Scientific Reports.2021;[Epub] CrossRef - Effect of co-positivity for brucellosis and tuberculosis on milk yield and fertility of Holstein cows
M. Mellado, N. Treviño, F. G. Véliz, U. Macías-Cruz, L. Avendaño-Reyes, A. de Santiago, J. E. García
Tropical Animal Health and Production.2021;[Epub] CrossRef - Detection of bacterial fluorescence from in vivo wound biofilms using a point‐of‐care fluorescence imaging device
Andrea J. Lopez, Laura M. Jones, Landrye Reynolds, Rachel C. Diaz, Isaiah K. George, William Little, Derek Fleming, Anna D'souza, Monique Y. Rennie, Kendra P. Rumbaugh, Allie Clinton Smith
International Wound Journal.2021; 18(5): 626. CrossRef - Ditylenchus dipsaci and Fusarium oxysporum on garlic: one plus one does not equal two
Mary Ruth McDonald, Lilieth Ives, Kwasi Adusei-Fosu, Katerina S. Jordan
Canadian Journal of Plant Pathology.2021; 43(5): 749. CrossRef - Effects of inflammatory stimuli on responses of macrophages to Mycoplasma bovis infection
Monica Baquero, Ksenia Vulikh, Cassidy Wong, Meghan Domony, DeLenn Burrows, David Marom, Jose Perez-Casal, Hugh Y. Cai, Jeff L. Caswell
Veterinary Microbiology.2021; 262: 109235. CrossRef - Polymicrobial Interactions in the Urinary Tract: Is the Enemy of My Enemy My Friend?
Jordan R. Gaston, Alexandra O. Johnson, Kirsten L. Bair, Ashley N. White, Chelsie E. Armbruster, Karen M. Ottemann
Infection and Immunity.2021;[Epub] CrossRef - Clinical Implications of Polymicrobial Synergism Effects on Antimicrobial Susceptibility
William Little, Caroline Black, Allie Clinton Smith
Pathogens.2021; 10(2): 144. CrossRef - Bacterial Interactions with Aspergillus fumigatus in the Immunocompromised Lung
Anatte Margalit, James C. Carolan, Kevin Kavanagh
Microorganisms.2021; 9(2): 435. CrossRef - Characterization of Polybacterial versus Monobacterial Conjunctivitis Infections in Pediatric Subjects Across Multiple Studies and Microbiological Outcomes with Besifloxacin Ophthalmic Suspension 0.6%
Joseph M Blondeau, Howard M Proskin, Christine M Sanfilippo, Heleen H DeCory
Clinical Ophthalmology.2021; Volume 15: 4419. CrossRef - Prospective assessment of catheter-associated bacteriuria clinical presentation, epidemiology, and colonization dynamics in nursing home residents
Chelsie E. Armbruster, Aimee L. Brauer, Monica S. Humby, Jiahui Shao, Saptarshi Chakraborty
JCI Insight.2021;[Epub] CrossRef - Burns and biofilms: priority pathogens and in vivo models
Evgenia Maslova, Lara Eisaiankhongi, Folke Sjöberg, Ronan R. McCarthy
npj Biofilms and Microbiomes.2021;[Epub] CrossRef - Genetically Programmable Microbial Assembly
Mark T. Kozlowski, Bradley R. Silverman, Christopher P. Johnstone, David A. Tirrell
ACS Synthetic Biology.2021; 10(6): 1351. CrossRef - Hormones Can Influence Antibiotic Susceptibilities Even in Mono- and Co-Culture Conditions
Fatma Kalaycı-Yüksek, Defne Gümüş, Mine Anğ-Küçüker
Acta Biologica Marisiensis.2021; 4(2): 39. CrossRef - Synergistic Cues from Diverse Bacteria Enhance Multicellular Development in a Choanoflagellate
Ella V. Ireland, Arielle Woznica, Nicole King, Eric V. Stabb
Applied and Environmental Microbiology.2020;[Epub] CrossRef - Cooperation and Conflict Within the Microbiota and Their Effects On Animal Hosts
Alexandre R. T. Figueiredo, Jos Kramer
Frontiers in Ecology and Evolution.2020;[Epub] CrossRef - Weakest-Link Dynamics Predict Apparent Antibiotic Interactions in a Model Cross-Feeding Community
Elizabeth M. Adamowicz, William R. Harcombe
Antimicrobial Agents and Chemotherapy.2020;[Epub] CrossRef - Pseudomonad reverse carbon catabolite repression, interspecies metabolite exchange, and consortial division of labor
Heejoon Park, S. Lee McGill, Adrienne D. Arnold, Ross P. Carlson
Cellular and Molecular Life Sciences.2020; 77(3): 395. CrossRef - Strain Background, Species Frequency, and Environmental Conditions Are Important in Determining Pseudomonas aeruginosa and Staphylococcus aureus Population Dynamics and Species Coexistence
Selina Niggli, Rolf Kümmerli, Donald W. Schaffner
Applied and Environmental Microbiology.2020;[Epub] CrossRef - Molecular characteristics and risk factors associated with linezolid-resistant Enterococcus faecalis infection in Southwest China
Jiaqi Zou, Yun Xia
Journal of Global Antimicrobial Resistance.2020; 22: 504. CrossRef - From Nursery to Nursing Home: Emerging Concepts in Clostridioides difficile Pathogenesis
Alexander B. Smith, Joshua Soto Ocana, Joseph P. Zackular, Anthony R. Richardson
Infection and Immunity.2020;[Epub] CrossRef - Successful treatment of a unique chronic multi-bacterial scalp infection with N-chlorotaurine, N-bromotaurine and bromamine T
Anthony M. Kyriakopoulos, Markus Nagl, Dorothea Orth-Höller, Janusz Marcinkiewicz, Stella Baliou, Vassilis Zoumbourlis
Access Microbiology
.2020;[Epub] CrossRef - The social life of microbes in chronic infection
Carolyn B Ibberson, Marvin Whiteley
Current Opinion in Microbiology.2020; 53: 44. CrossRef - Polymicrobial Biofilm Interaction Between Histophilus somni and Pasteurella multocida
Briana Petruzzi, Allan Dickerman, Kevin Lahmers, William K. Scarratt, Thomas J. Inzana
Frontiers in Microbiology.2020;[Epub] CrossRef -
Quantitative Framework for Model Evaluation in Microbiology Research Using
Pseudomonas aeruginosa
and Cystic Fibrosis Infection as a Test Case
Daniel M. Cornforth, Frances L. Diggle, Jeffrey A. Melvin, Jennifer M. Bomberger, Marvin Whiteley, Arturo Casadevall
mBio.2020;[Epub] CrossRef - Harnessing bacterial interactions to manage infections: a review on the opportunistic pathogen Pseudomonas aeruginosa as a case example
Chiara Rezzoagli, Elisa T. Granato, Rolf Kümmerli
Journal of Medical Microbiology.2020; 69(2): 147. CrossRef - Comparison of sTREM‐1 and associated periodontal and bacterial factors before/after periodontal therapy, and impact of psychosocial factors
Marie Dubar, Jean‐Pol Frippiat, Thomas Remen, Amir Boufenzer, Corentine Alauzet, Cedric Baumann, Sebastien Gibot, Catherine Bisson
Journal of Clinical Periodontology.2020; 47(9): 1064. CrossRef -
Cooperative Interactions between
Trichomonas vaginalis
and Associated Bacteria Enhance Paracellular Permeability of the Cervicovaginal Epithelium by Dysregulating Tight Junctions
Annabel S. Hinderfeld, Niha Phukan, Ann-Katrein Bär, Anthony M. Roberton, Augusto Simoes-Barbosa, De'Broski R. Herbert
Infection and Immunity.2019;[Epub] CrossRef - The Structure of Dental Plaque Microbial Communities in the Transition from Health to Dental Caries and Periodontal Disease
Alex M. Valm
Journal of Molecular Biology.2019; 431(16): 2957. CrossRef - 2018 international consensus meeting on musculoskeletal infection: Summary from the biofilm workgroup and consensus on biofilm related musculoskeletal infections
Kordo Saeed, Alex C. McLaren, Edward M. Schwarz, Valentin Antoci, William V. Arnold, Antonia F. Chen, Martin Clauss, Jaime Esteban, Vanya Gant, Edward Hendershot, Noreen Hickok, Carlos A. Higuera, Débora C. Coraça‐Huber, Hyonmin Choe, Jessica A. Jennings,
Journal of Orthopaedic Research.2019; 37(5): 1007. CrossRef - Antimicrobial resistance three ways: healthcare crisis, major concepts and the relevance of biofilms
Paula Jorge, Andreia Patrícia Magalhães, Tânia Grainha, Diana Alves, Ana Margarida Sousa, Susana Patrícia Lopes, Maria Olívia Pereira
FEMS Microbiology Ecology.2019;[Epub] CrossRef - Optimal environmental and culture conditions allow the in vitro coexistence of Pseudomonas aeruginosa and Staphylococcus aureus in stable biofilms
Maria del Mar Cendra, Núria Blanco-Cabra, Lucas Pedraz, Eduard Torrents
Scientific Reports.2019;[Epub] CrossRef - In vitro and ex vivo systems at the forefront of infection modeling and drug discovery
Di Shi, Gujie Mi, Mian Wang, Thomas J. Webster
Biomaterials.2019; 198: 228. CrossRef - Microbiome Dependent Regulation of Tregs and Th17 Cells in Mucosa
Pushpa Pandiyan, Natarajan Bhaskaran, Mangge Zou, Elizabeth Schneider, Sangeetha Jayaraman, Jochen Huehn
Frontiers in Immunology.2019;[Epub] CrossRef - Porphyromonas gingivalis Tyrosine Phosphatase Php1 Promotes Community Development and Pathogenicity
Young-Jung Jung, Daniel P. Miller, John D. Perpich, Zackary R. Fitzsimonds, Daonan Shen, Jun Ohshima, Richard J. Lamont, Indranil Biswas
mBio.2019;[Epub] CrossRef - Coinfection with Leishmania major and Staphylococcus aureus enhances the pathologic responses to both microbes through a pathway involving IL-17A
Tiffany Y. Borbón, Breanna M. Scorza, Gwendolyn M. Clay, Fellipe Lima Nobre de Queiroz, Alan J. Sariol, Jayden L. Bowen, Yani Chen, Bayan Zhanbolat, Corey P. Parlet, Diogo G. Valadares, Suzanne L. Cassel, William M. Nauseef, Alexander R. Horswill, Fayyaz
PLOS Neglected Tropical Diseases.2019; 13(5): e0007247. CrossRef -
A Rare Opportunist,
Morganella morganii
, Decreases Severity of Polymicrobial Catheter-Associated Urinary Tract Infection
Brian S. Learman, Aimee L. Brauer, Kathryn A. Eaton, Chelsie E. Armbruster, Marvin Whiteley
Infection and Immunity.2019;[Epub] CrossRef -
Streptococcus gordonii
programs epithelial cells to resist ZEB2 induction by
Porphyromonas gingivalis
Jun Ohshima, Qian Wang, Zackary R. Fitzsimonds, Daniel P. Miller, Maryta N. Sztukowska, Young-Jung Jung, Mikako Hayashi, Marvin Whiteley, Richard J. Lamont
Proceedings of the National Academy of Sciences.2019; 116(17): 8544. CrossRef - The oral microbiota: dynamic communities and host interactions
Richard J. Lamont, Hyun Koo, George Hajishengallis
Nature Reviews Microbiology.2018; 16(12): 745. CrossRef - Role of Short Chain Fatty Acids in Controlling Tregs and Immunopathology During Mucosal Infection
Natarajan Bhaskaran, Cheriese Quigley, Clarissa Paw, Shivani Butala, Elizabeth Schneider, Pushpa Pandiyan
Frontiers in Microbiology.2018;[Epub] CrossRef - Cross-feeding modulates antibiotic tolerance in bacterial communities
Elizabeth M Adamowicz, Jeffrey Flynn, Ryan C Hunter, William R Harcombe
The ISME Journal.2018; 12(11): 2723. CrossRef - Molecular Identification of Bacteria in Intra-abdominal Abscesses Using Deep Sequencing
Andrew Kozlov, Lorenzo Bean, Emilie V Hill, Lisa Zhao, Eric Li, Gary P Wang
Open Forum Infectious Diseases.2018;[Epub] CrossRef - Options and Limitations in Clinical Investigation of Bacterial Biofilms
Maria Magana, Christina Sereti, Anastasios Ioannidis, Courtney A. Mitchell, Anthony R. Ball, Emmanouil Magiorkinis, Stylianos Chatzipanagiotou, Michael R. Hamblin, Maria Hadjifrangiskou, George P. Tegos
Clinical Microbiology Reviews.2018;[Epub] CrossRef - Mutations in bacterial genes induce unanticipated changes in the relationship between bacterial pathogens in experimental otitis media
Vinal Lakhani, Li Tan, Sayak Mukherjee, William C. L. Stewart, W. Edward Swords, Jayajit Das
Royal Society Open Science.2018; 5(11): 180810. CrossRef - Acclimation of Culturable Bacterial Communities under the Stresses of Different Organic Compounds
Hui Wang, Shuangfei Zhang, Amit Pratush, Xueying Ye, Jinli Xie, Huan Wei, Chongran Sun, Zhong Hu
Frontiers in Microbiology.2018;[Epub] CrossRef - Effects of Growth Surface Topography on Bacterial Signaling in Coculture Biofilms
Arunima Bhattacharjee, Mughees Khan, Maya Kleiman, Allon I. Hochbaum
ACS Applied Materials & Interfaces.2017; 9(22): 18531. CrossRef - In vitro microbicidal, anti‐biofilm and cytotoxic effects of different commercial antiseptics
Silvestre Ortega‐Peña, Christian Hidalgo‐González, Martin C Robson, Edgar Krötzsch
International Wound Journal.2017; 14(3): 470. CrossRef - Pseudomonas aeruginosa Contact-Dependent Growth Inhibition Plays Dual Role in Host-Pathogen Interactions
Jeffrey A. Melvin, Jordan R. Gaston, Shawn N. Phillips, Michael J. Springer, Christopher W. Marshall, Robert M. Q. Shanks, Jennifer M. Bomberger, Sarah E. F. D'Orazio
mSphere.2017;[Epub] CrossRef - Fungal Biofilms and Polymicrobial Diseases
Caroline Costa-Orlandi, Janaina Sardi, Nayla Pitangui, Haroldo De Oliveira, Liliana Scorzoni, Mariana Galeane, Kaila Medina-Alarcón, Wanessa Melo, Mônica Marcelino, Jaqueline Braz, Ana Fusco-Almeida, Maria Mendes-Giannini
Journal of Fungi.2017; 3(2): 22. CrossRef - Discovery of Small Molecules as Multi-Toll-like Receptor Agonists with Proinflammatory and Anticancer Activities
Lei Zhang, Varun Dewan, Hang Yin
Journal of Medicinal Chemistry.2017; 60(12): 5029. CrossRef - Potentiation and tolerance of toll-like receptor priming in human endothelial cells
Stephen R. Koch, Fred S. Lamb, Judith Hellman, Edward R. Sherwood, Ryan J. Stark
Translational Research.2017; 180: 53. CrossRef - Albumin Inhibits Pseudomonas aeruginosa Quorum Sensing and Alters Polymicrobial Interactions
Allie Clinton Smith, Anne Rice, Bryan Sutton, Rebecca Gabrilska, Aimee K. Wessel, Marvin Whiteley, Kendra P. Rumbaugh, Beth McCormick
Infection and Immunity.2017;[Epub] CrossRef - Microbiota Analysis of Biofilms on Experimental Abutments Mimicking Dental Implants: An In Vivo Model
Berta Cortés‐Acha, Rui Figueiredo, Ramón Seminago, Francisco J. Roig, Carlos Llorens, Eduard Valmaseda‐Castellón
Journal of Periodontology.2017; 88(10): 1090. CrossRef - Identification by highly sensitive 16S metagenomic sequencing of an unusual case of polymicrobial bacteremia
Benjamin Lelouvier, Florence Servant, Pierre Delobel, Michael Courtney, Meyer Elbaz, Jacques Amar
Journal of Infection.2017; 75(3): 278. CrossRef - Metabolic crosstalk regulates Porphyromonas gingivalis colonization and virulence during oral polymicrobial infection
Masae Kuboniwa, John R. Houser, Erik L. Hendrickson, Qian Wang, Samar A. Alghamdi, Akito Sakanaka, Daniel P. Miller, Justin A. Hutcherson, Tiansong Wang, David A. C. Beck, Marvin Whiteley, Atsuo Amano, Huizhi Wang, Edward M. Marcotte, Murray Hackett, Rich
Nature Microbiology.2017; 2(11): 1493. CrossRef - Rapid susceptibility profiling of carbapenem-resistant Klebsiella pneumoniae
K. T. Mulroney, J. M. Hall, X. Huang, E. Turnbull, N. M. Bzdyl, A. Chakera, U. Naseer, E. M. Corea, M. J. Ellington, K. L. Hopkins, A. L. Wester, O. Ekelund, N. Woodford, T. J. J. Inglis
Scientific Reports.2017;[Epub] CrossRef - Dancing with the Stars: How Choreographed Bacterial Interactions Dictate Nososymbiocity and Give Rise to Keystone Pathogens, Accessory Pathogens, and Pathobionts
George Hajishengallis, Richard J. Lamont
Trends in Microbiology.2016; 24(6): 477. CrossRef - Resource limitation drives spatial organization in microbial groups
Sara Mitri, Ellen Clarke, Kevin R Foster
The ISME Journal.2016; 10(6): 1471. CrossRef - Hydrogen peroxide is a central determinant of oral polymicrobial synergy
Richard J. Lamont
Environmental Microbiology.2016; 18(11): 3609. CrossRef - Interactions between Pseudomonas aeruginosa and Staphylococcus aureus during co-cultivations and polymicrobial infections
Angela T. Nguyen, Amanda G. Oglesby-Sherrouse
Applied Microbiology and Biotechnology.2016; 100(14): 6141. CrossRef - Cyanide Toxicity to Burkholderia cenocepacia Is Modulated by Polymicrobial Communities and Environmental Factors
Steve P. Bernier, Matthew L. Workentine, Xiang Li, Nathan A. Magarvey, George A. O'Toole, Michael G. Surette
Frontiers in Microbiology.2016;[Epub] CrossRef - 16S rRNA analysis provides evidence of biofilms on all components of three infected periprosthetic knees including permanent braided suture
Matthew C. Swearingen, Alex C. DiBartola, Devendra Dusane, Jeffrey Granger, Paul Stoodley, Thomas Bjarnsholt
Pathogens and Disease.2016; 74(7): ftw083. CrossRef - A Commensal Bacterium Promotes Virulence of an Opportunistic Pathogen via Cross-Respiration
Apollo Stacy, Derek Fleming, Richard J. Lamont, Kendra P. Rumbaugh, Marvin Whiteley, Michael S. Gilmore, Vanessa Sperandio, Donald Demuth
mBio.2016;[Epub] CrossRef - Fusobacterium nucleatum infections: clinical spectrum and bacteriological features of 78 cases
E. Denes, O. Barraud
Infection.2016; 44(4): 475. CrossRef - The biogeography of polymicrobial infection
Apollo Stacy, Luke McNally, Sophie E. Darch, Sam P. Brown, Marvin Whiteley
Nature Reviews Microbiology.2016; 14(2): 93. CrossRef - Do Polymicrobial Intra-Abdominal Infections Have Worse Outcomes than Monomicrobial Intra-Abdominal Infections?
Puja M. Shah, Brandy L. Edwards, Zachary C. Dietch, Christopher A. Guidry, Stephen W. Davies, Sara A. Hennessy, Therese M. Duane, Patrick J. O'Neill, Raul Coimbra, Charles H. Cook, Reza Askari, Kimberly Popovsky, Robert G. Sawyer
Surgical Infections.2016; 17(1): 27. CrossRef - Stochastic Assembly of Bacteria in Microwell Arrays Reveals the Importance of Confinement in Community Development
Ryan H. Hansen, Andrea C. Timm, Collin M. Timm, Amber N. Bible, Jennifer L. Morrell-Falvey, Dale A. Pelletier, Michael L. Simpson, Mitchel J. Doktycz, Scott T. Retterer, Xiangzhen Li
PLOS ONE.2016; 11(5): e0155080. CrossRef - Study of the growth of Enterococcus faecalis, Escherichia coli and their mixtures by microcalorimetry
C. Vazquez, N. Lago, M. M. Mato, L. Esarte, J. L. Legido
Journal of Thermal Analysis and Calorimetry.2016; 125(2): 739. CrossRef - Let there be bioluminescence: development of a biophotonic imaging platform for in situ analyses of oral biofilms in animal models
Justin Merritt, Hidenobu Senpuku, Jens Kreth
Environmental Microbiology.2016; 18(1): 174. CrossRef - The cystic fibrosis microbiome in an ecological perspective and its impact in antibiotic therapy
Andreia P. Magalhães, Nuno F. Azevedo, Maria O. Pereira, Susana P. Lopes
Applied Microbiology and Biotechnology.2016; 100(3): 1163. CrossRef - Individuality, phenotypic differentiation, dormancy and ‘persistence’ in culturable bacterial systems: commonalities shared by environmental, laboratory, and clinical microbiology
Douglas Kell, Marnie Potgieter, Etheresia Pretorius
F1000Research.2015; 4: 179. CrossRef - Iron-Mediated Control of Pseudomonas aeruginosa-Staphylococcus aureus Interactions in the Cystic Fibrosis Lung
Patricia M. Barnabie, Marvin Whiteley, V. J. DiRita
Journal of Bacteriology.2015; 197(14): 2250. CrossRef - Polymicrobial Infective Endocarditis
Pablo Elpidio García-Granja, Javier López, Isidre Vilacosta, Carlos Ortiz-Bautista, Teresa Sevilla, Carmen Olmos, Cristina Sarriá, Carlos Ferrera, Itziar Gómez, José Alberto San Román
Medicine.2015; 94(49): e2000. CrossRef - Mass spectrometry tools and workflows for revealing microbial chemistry
Tal Luzzatto-Knaan, Alexey V. Melnik, Pieter C. Dorrestein
The Analyst.2015; 140(15): 4949. CrossRef - Solving the etiology of dental caries
Aurea Simón-Soro, Alex Mira
Trends in Microbiology.2015; 23(2): 76. CrossRef - Individuality, phenotypic differentiation, dormancy and ‘persistence’ in culturable bacterial systems: commonalities shared by environmental, laboratory, and clinical microbiology
Douglas Kell, Marnie Potgieter, Etheresia Pretorius
F1000Research.2015; 4: 179. CrossRef - Pseudomonas aeruginosa adaptation to human hosts
Evan S Snitkin, Julia A Segre
Nature Genetics.2015; 47(1): 2. CrossRef - Biofilm Models of Polymicrobial Infection
Rebecca A Gabrilska, Kendra P Rumbaugh
Future Microbiology.2015; 10(12): 1997. CrossRef - The Limitations of In Vitro Experimentation in Understanding Biofilms and Chronic Infection
Aled E.L. Roberts, Kasper N. Kragh, Thomas Bjarnsholt, Stephen P. Diggle
Journal of Molecular Biology.2015; 427(23): 3646. CrossRef - Mass spectrometric metabolomic imaging of biofilms on corroding steel surfaces using laser ablation and solvent capture by aspiration
Jonathan I. Brauer, Zakari Makama, Vincent Bonifay, Egemen Aydin, Eric D. Kaufman, Iwona B. Beech, Jan Sunner
Biointerphases.2015;[Epub] CrossRef - Spoils of war: iron at the crux of clinical and ecological fitness of Pseudomonas aeruginosa
Angela T. Nguyen, Amanda G. Oglesby-Sherrouse
BioMetals.2015; 28(3): 433. CrossRef - Biotic inactivation of the Pseudomonas aeruginosa quinolone signal molecule
Eliza Ye‐Chen Soh, Siri R. Chhabra, Nigel Halliday, Stephan Heeb, Christine Müller, Franziska S. Birmes, Susanne Fetzner, Miguel Cámara, Kok‐Gan Chan, Paul Williams
Environmental Microbiology.2015; 17(11): 4352. CrossRef - The Upper Respiratory Tract as a Microbial Source for Pulmonary Infections in Cystic Fibrosis. Parallels from Island Biogeography
Katrine L. Whiteson, Barbara Bailey, Megan Bergkessel, Douglas Conrad, Laurence Delhaes, Ben Felts, J. Kirk Harris, Ryan Hunter, Yan Wei Lim, Heather Maughan, Robert Quinn, Peter Salamon, James Sullivan, Brandie D. Wagner, Paul B. Rainey
American Journal of Respiratory and Critical Care Medicine.2014; 189(11): 1309. CrossRef - Molecular microbiology in antibacterial research
You-Hee Cho
Journal of Microbiology.2014; 52(3): 185. CrossRef - Reducing the bioactivity of Tannerella forsythia lipopolysaccharide by Porphyromonas gingivalis
Young-Jae Kim, Sung-Hoon Lee
Journal of Microbiology.2014; 52(8): 702. CrossRef
Journal Article
- Soil pH and electrical conductivity are key edaphic factors shaping bacterial communities of greenhouse soils in Korea
-
Jeong Myeong Kim , An-Sung Roh , Seung-Chul Choi , Eun-Jeong Kim , Moon-Tae Choi , Byung-Koo Ahn , Sun-Kuk Kim , Young-Han Lee , Jae-Ho Joa , Seong-Soo Kang , Shin Ae Lee , Jae-Hyung Ahn , Jaekyeong Song , Hang-Yeon Weon
-
J. Microbiol. 2016;54(12):838-845. Published online November 26, 2016
-
DOI: https://doi.org/10.1007/s12275-016-6526-5
-
-
46
View
-
0
Download
-
122
Crossref
-
Abstract
-
Soil microorganisms play an essential role in soil ecosystem
processes such as organic matter decomposition, nutrient
cycling, and plant nutrient availability. The land use for greenhouse
cultivation has been increasing continuously, which
involves an intensive input of agricultural materials to enhance
productivity; however, relatively little is known about
bacterial communities in greenhouse soils. To assess the effects
of environmental factors on the soil bacterial diversity
and community composition, a total of 187 greenhouse soil
samples collected across Korea were subjected to bacterial
16S rRNA gene pyrosequencing analysis. A total of 11,865
operational taxonomic units at a 97% similarity cutoff level
were detected from 847,560 sequences. Among nine soil factors
evaluated; pH, electrical conductivity (EC), exchangeable
cations (Ca2+, Mg2+, Na+, and K+), available P2O5, organic
matter, and NO3-N, soil pH was most strongly correlated
with bacterial richness (polynomial regression, pH: R2 =
0.1683, P < 0.001) and diversity (pH: R2 = 0.1765, P < 0.001).
Community dissimilarities (Bray-Curtis distance) were positively
correlated with Euclidean distance for pH and EC
(Mantel test, pH: r = 0.2672, P < 0.001; EC: r = 0.1473, P < 0.001). Among dominant phyla (> 1%), the relative abundances
of Proteobacteria, Gemmatimonadetes, Acidobacteria,
Bacteroidetes, Chloroflexi, and Planctomycetes were also more
strongly correlated with pH and EC values, compared with
other soil cation contents, such as Ca2+, Mg2+, Na+, and K+.
Our results suggest that, despite the heterogeneity of various
environmental variables, the bacterial communities of
the intensively cultivated greenhouse soils were particularly
influenced by soil pH and EC. These findings therefore shed
light on the soil microbial ecology of greenhouse cultivation,
which should be helpful for devising effective management
strategies to enhance soil microbial diversity and improving
crop productivity.
-
Citations
Citations to this article as recorded by

- Regulating facility soil microbial community and reducing cadmium enrichment in lettuce by reductive soil disinfestation
Kaining Sun, Shu Zhang, Junfeng Wang
Frontiers in Environmental Science.2024;[Epub] CrossRef - Growth Disturbance, Mineral Nutrient Imbalance, Specific Symptoms and Leaf Characteristics Changes in Two Pomegranate Cultivars Induced by Deficiencies and Excess of Ca, Mg, Zn and Fe
Azhar Ouni, Samia Abboud, Darine Tlili, Sahar Ben Abdelwaheb, Mourad Jellali, Wafaa Bousetta, Messaoud Mars, Soumaya Dbara
Journal of Soil Science and Plant Nutrition.2024; 24(4): 8291. CrossRef - Intermediate irrigation with low fertilization promotes soil nutrient cycling and reduces CO2 and CH4 emissions via regulating fungal communities in arid agroecosystems
Wancai Wang, Zhencheng Ye, Jing Li, Guobin Liu, Qixiao Wu, Zhaoyang Wang, Guoqin He, Wende Yan, Chao Zhang
Journal of Environmental Management.2024; 351: 119688. CrossRef - Alpine wetlands degradation leads to soil nutrient imbalances that affect plant growth and microbial diversity
Ganjun Xu, Xiaoming Kang, Fei Wang, Weirong Zhuang, Wende Yan, Kerou Zhang
Communications Earth & Environment.2024;[Epub] CrossRef - Continuous cropping obstacles of medicinal plants: Focus on the plant-soil-microbe interaction system in the rhizosphere
Jiameng Liao, Pengguo Xia
Scientia Horticulturae.2024; 328: 112927. CrossRef - Agricultural ecosystems rather than fertilization strategies drives structure and composition of the ureolytic microbial functional guilds
Na Lv, Ping Gong, Hao Sun, Xiangxin Sun, Zhiguang Liu, Xueshi Xie, Yan Xue, Yuchao Song, Kaikuo Wu, Tingting Wang, Zhijie Wu, Lili Zhang
Journal of Environmental Management.2024; 372: 123148. CrossRef - Effects of reductive soil disinfestation combined with different types of organic materials on the microbial community and functions
Yu Zhan, Yi Zhou, Ergang Wang, Xinyue Miao, Tingting Zhou, Ning Yan, Changbao Chen, Qiong Li, Wenli Chen
Microbiology Spectrum.2024;[Epub] CrossRef - Monitoring of indicators and bacterial succession in organic-amended technosols for the restoration of semiarid ecosystems
Rocío Soria, Raúl Ortega, Nicolás Valiente, Natalia Rodríguez-Berbel, Manuel Esteban Lucas-Borja, Isabel Miralles
Science of The Total Environment.2024; 954: 176302. CrossRef - Contrasting responses of α- and β-multifunctionality to aboveground plant community in the Qinghai-Tibet Plateau
Xia Zhao, Hanwen Cui, Hongxian Song, Jingwei Chen, Jiajia Wang, Ziyang Liu, Izhar Ali, Zi Yang, Xiao Hou, Xianhui Zhou, Sa Xiao, Shuyan Chen
Science of The Total Environment.2024; 917: 170464. CrossRef - Vermicompost Supply Enhances Fragrant-Rice Yield by Improving Soil Fertility and Eukaryotic Microbial Community Composition under Environmental Stress Conditions
Anas Iqbal, Quaid Hussain, Zhaowen Mo, Tian Hua, Abd El-Zaher M. A. Mustafa, Xiangru Tang
Microorganisms.2024; 12(6): 1252. CrossRef - Substation of vermicompost mitigates Cd toxicity, improves rice yields and restores bacterial community in a Cd-contaminated soil in Southern China
Anas Iqbal, Jiang Ligeng, Zhaowen Mo, Muhammad Adnan, Rattan Lal, Maid Zaman, Sayed Usman, Tian Hua, Muhammad Imran, Sheng-Gang Pan, Jian-Ying Qi, Meiyang Duan, Qichang Gu, Xiangru Tang
Journal of Hazardous Materials.2024; 465: 133118. CrossRef - Assembly of root-associated bacterial community and soil health in cadmium-contaminated soil affected by nano/bulk-biochar compost associations
Qizhen Liu, Zhiqin Chen, Dan He, Ancao Pan, Jie yuan, Yaru Liu, Lukuan Huang, Ying Feng
Environmental Pollution.2024; 360: 124619. CrossRef - Unravelling the influence of microplastics with/without additives on radish (Raphanus sativus) and microbiota in two agricultural soils differing in pH
Jun Meng, Chengmei Diao, Zhonghua Cui, Zhangtao Li, Jiayi Zhao, Haibo Zhang, Minjun Hu, Jun Xu, Yugen Jiang, Ghulam Haider, Dong Yang, Shengdao Shan, Huaihai Chen
Journal of Hazardous Materials.2024; 478: 135535. CrossRef - Unveiling soil bacterial ecosystems in andean citrus orchards of Santander, Colombia
Genis Andrés Castillo-Villamizar, Valentina Tapia-Perdomo, Julieth Maldonado-Pava, Pedro Santamaría-Gálvis, Lizbeth Sayavedra, Jorge Hernandez-Torres, Edinson Puentes-Cala
Frontiers in Ecology and Evolution.2024;[Epub] CrossRef - Analysis of microbial communities in wheat, alfalfa, and oat crops after Tilletia laevis Kühn infection
Yuyang Shen, Chen Delai, Taiguo Liu, Wanquan Chen, Guangkuo Li, Haifeng Gao, Li Gao
Frontiers in Microbiology.2024;[Epub] CrossRef - Uptake and translocation of fungicide picarbutrazox in greenhouse cabbage: the significance of translocation factors and home processing
Ye-Jin Heo, Se-Yeon Kwak, Aniruddha Sarker, Sang-Hyeob Lee, Jae-Won Choi, Ji-Eun Oh, Lawal Abdulkareem, Jang-Eok Kim
Environmental Science and Pollution Research.2023; 30(14): 40919. CrossRef - Limitations of biofertilizers and their revitalization through nanotechnology
Pradeep Kumar Rai, Anuradha Rai, Naveen Kumar Sharma, Tarunendu Singh, Yogendra Kumar
Journal of Cleaner Production.2023; 418: 138194. CrossRef - New interactive functional indicator approach for river health assessment in an Asian temperate river: Comprehensive analysis of water chemistry, physical habitat, land use, and the biological disturbance of invasive alien species
Namsrai Jargal, Jeong-Eun Kim, Kwang-Guk An
Ecological Indicators.2023; 157: 111212. CrossRef - Response of the Soil Fungal Community and Its Function during the Conversion of Forestland to Tea Plantations: A Case Study in Southeast China
Feng Wang, Yuzhen Chen, Xiaomin Yu, Wenquan Yu, Zhiming You, Zhenbiao Yang
Forests.2023; 14(2): 209. CrossRef - Differences in bacterial community composition, structure and function between sediments in waterways and non-navigable channels in a plain river network area
Yixin Ma, Zulin Hua, Peng Wang, Liang Yu, Ying Lu, Yifan Wang, Yueyang Dong
Environmental Science and Pollution Research.2023; 30(16): 45910. CrossRef - Depth-Dependent Distribution of Prokaryotes in Sediments of the Manganese Crust on Nazimov Guyots of the Magellan Seamounts
Jianxing Sun, Hongbo Zhou, Haina Cheng, Zhu Chen, Jichao Yang, Yuguang Wang, Chunlei Jing
Microbial Ecology.2023; 86(4): 3027. CrossRef - Predicting microbial responses to changes in soil physical and chemical properties under different land management
Sara Sadeghi, Billi Jean Petermann, Joshua J. Steffan, Eric C. Brevik, Csongor Gedeon
Applied Soil Ecology.2023; 188: 104878. CrossRef - Bacterial and archaeal communities in saline soils from a Los Negritos geothermal area in Mexico
Joseph GUEVARA-LUNA, Mario HERNÁNDEZ-GUZMÁN, Nina MONTOYA-CIRIACO, Luc DENDOOVEN, Marina Olivia FRANCO-HERNÁNDEZ, Paulina ESTRADA-DE LOS SANTOS, María Soledad VÁSQUEZ-MURRIETA
Pedosphere.2023; 33(2): 312. CrossRef - Heavy Metal Distribution and Microbial Diversity of the Surrounding Soil and Tailings of Two Cu Mines in China
Yu Xia, Jing Liu, Jie Chang, Weijia Li, Kaiyu Xia, Zilong Liu, Yizhen Liu, Xuwen He
Water, Air, & Soil Pollution.2023;[Epub] CrossRef - Phosphorus addition modifies the bacterial community structure in rhizosphere of Achnatherum inebrians by influencing the soil properties and modulates the Epichloë gansuensis-mediated root exudate profiles
Chao Wang, Jianfeng Wang, Xueli Niu, Yang Yang, Kamran Malik, Jie Jin, Chengzhou Zhao, Rong Tang, Rong Zheng, Rong Huang
Plant and Soil.2023; 491(1-2): 543. CrossRef - Effects of 13C isotope-labeled allelochemicals on the growth of the invasive plant Alternanthera philoxeroides
Zexun Hua, Qingsong Xie, Yue Li, Mengying He, Yan Wang, Hongmiao Wu, Zhen Zhang
Scientific Reports.2023;[Epub] CrossRef - Development of rapid and precise approach for quantification of bacterial taxa correlated with soil health
Taghreed Khaled Abdelmoneim, Mahmoud S. M. Mohamed, Ismail Abdelshafy Abdelhamid, Sara Fareed Mohamed Wahdan, Mohamed A. M. Atia
Frontiers in Microbiology.2023;[Epub] CrossRef - Plant ash prevents acid mine drainage from sulfur-bearing tailings through multiple actions — A low-cost alkaline material
Jun Zeng, Jinrong Qiu, Jun Zhang, Yuqi Qi, Rentao Liu, Chuanqi Jian, Na Liu, Yaoming Su
Applied Geochemistry.2023; 155: 105702. CrossRef - Natural restoration alters soil microbial community structure, but has contrasting effects on the diversity of bacterial and fungal assemblages in salinized grasslands
Weina Wang, Huanjun Liu, Lifei Chen, Kadri Koorem, Yingchao Hu, Liang-Jun Hu
Science of The Total Environment.2023; 891: 164726. CrossRef - Spatial controls of methane uptake in upland soils across climatic and geological regions in Greenland
Ludovica D’Imperio, Bing-Bing Li, James M. Tiedje, Youmi Oh, Jesper Riis Christiansen, Sebastian Kepfer-Rojas, Andreas Westergaard-Nielsen, Kristian Koefoed Brandt, Peter E. Holm, Peiyan Wang, Per Ambus, Bo Elberling
Communications Earth & Environment.2023;[Epub] CrossRef - Comparative Analysis of Microbial Community Characteristic of Acidic and Neutral Soils in Korean Orchards
Do-Hyun Kim, Ji Yong Moon, Soo Young Hong, Hyeonmo Ahn, Yeo Wook Yoon, Hyo Jin Kim, So Youn Lee, Ji Won Kim, Eun-heui Han, Sang Yoon Kim, Eunjin Lee, Hang-Yeon Weon, Ho-Jong Ju
Korean Journal of Soil Science and Fertilizer.2023; 56(4): 449. CrossRef - Application of bovine bone meal and oyster shell meal to heavy metals polluted soil: Vegetable safety and bacterial community
Xiongkai Zheng, Bowen Zhang, Weibin Lai, Mengting Wang, Xueqin Tao, Mengyao Zou, Jiangmin Zhou, Guining Lu
Chemosphere.2023; 313: 137501. CrossRef - Soil Bacterial Community Structure and Physicochemical Influencing Factors of Artificial Haloxylon ammodendron Forest in the Sand Blocking and Fixing Belt of Minqin, China
Anlin Wang, Rui Ma, Yanjun Ma, Danni Niu, Teng Liu, Yongsheng Tian, Zhenghu Dong, Qiaodi Chai
Forests.2023; 14(11): 2244. CrossRef - Relationships between Rhizosphere Environments and Growth of 10-Year-Old Wild-Simulated Ginseng
Yeong-Bae Yun, Kiyoon Kim, Jeong-Hoon Huh, Yurry Um
Agronomy.2023; 13(5): 1313. CrossRef - Effect comparisons of different conditioners and microbial agents on the degradation of estrogens during dairy manure composting
Yan Li, Dong Zeng, Xiao-Lu Jiang, De-Chun He, Jia-Wu Hu, Zi-Wei Liang, Jia-Cheng Wang, Wang-Rong Liu
Chemosphere.2023; 345: 140312. CrossRef - Effects of continuous cropping Jiashi muskmelon on rhizosphere microbial community
Jilian Wang, Mingyuan Li, Qian Zhou, Tian Zhang
Frontiers in Microbiology.2023;[Epub] CrossRef - Does biochar addition improve soil physicochemical properties, bacterial community and alfalfa growth for saline soils?
Yang Chen, Yuan Qiu, Xinmei Hao, Ling Tong, Sien Li, Shaozhong Kang
Land Degradation & Development.2023; 34(11): 3314. CrossRef - The Response of Soil Bacterial Communities to Cropping Systems in Saline–Alkaline Soil in the Songnen Plain
Xiaoqian Liu, Junnan Ding, Jingyang Li, Dan Zhu, Bin Li, Bohan Yan, Lina Mao, Guangyu Sun, Lei Sun, Xin Li
Agronomy.2023; 13(12): 2984. CrossRef - Evaluation of a subtropical maize-rice rotation system maintained under long-term fertilizer inputs for sustainable intensification of agriculture
Asif Hameed, Yu-Pei Chen, Fo-Ting Shen, Shih-Yao Lin, Hsin-I Huang, Yu-Wen Lin, Chiu-Chung Young
Applied Soil Ecology.2023; 184: 104772. CrossRef - Metagenomic analysis displays the potential predictive biodegradation pathways of the persistent pesticides in agricultural soil with a long record of pesticide usage
Muneer Ahmad Malla, Anamika Dubey, Ashwani Kumar, Shweta Yadav
Microbiological Research.2022; 261: 127081. CrossRef - Soil microbial community responses to the application of a combined amendment in a historical zinc smelting area
Chuanjiang Tan, Youfa Luo, Tianling Fu
Environmental Science and Pollution Research.2022; 29(9): 13056. CrossRef - Elevated CO2 affects the rhizosphere microbial community and the growth of two invader plant species differently in semiarid Mediterranean soils
Fuensanta Caravaca, Pilar Torres, Gisela Díaz, Antonio Roldán
Land Degradation & Development.2022; 33(1): 117. CrossRef - Selective Enrichment Method for Isolation of Efficient Phosphate Solubilizing Bacteria from Soil
Patel HK, Vyas RV, Shelat HN
Communications in Soil Science and Plant Analysis.2022; 53(12): 1532. CrossRef - Impact of hexachlorocyclohexane addition on the composition and potential functions of the bacterial community in red and purple paddy soil
Jian Wang, Kaidi Tang, Xiaojie Hu, Hefei Wang, Fredrick Owino Gudda, Emmanuel Stephen Odinga, Hassan El-Ramady, Wanting Ling
Environmental Pollution.2022; 297: 118795. CrossRef - Remediation of Cd-, Pb-, Cu-, and Zn-contaminated soil using cow bone meal and oyster shell meal
Xiongkai Zheng, Mengyao Zou, Bowen Zhang, Weibin Lai, Xianming Zeng, Siyuan Chen, Mengting Wang, Xiaoyun Yi, Xueqin Tao, Guining Lu
Ecotoxicology and Environmental Safety.2022; 229: 113073. CrossRef - The spatio-chronological distribution of Achnatherum splendens influences soil bacterial communities in degraded grasslands
Chao Yang, Kangjia Li, Jipeng Sun, Weiyi Ye, Hao Lin, Yuze Yang, Yiran Zhao, Guofeng Yang, Zengyu Wang, Guihe Liu, Guomin Yu, Juan Sun
CATENA.2022; 209: 105828. CrossRef - Metagenomic analysis of bacterial communities of Wadi Namar Lake, Riyadh, Saudi Arabia
Modhi O. Alotaibi, Afrah E. Mohammed, Kamal H. Eltom
Saudi Journal of Biological Sciences.2022; 29(5): 3749. CrossRef - In situ restoration of soil ecological function in a coal gangue reclamation area after 10 years of elm/poplar phytoremediation
Dong-sheng Bai, Xu Yang, Jin-long Lai, Yi-wang Wang, Yu Zhang, Xue-gang Luo
Journal of Environmental Management.2022; 305: 114400. CrossRef - Antibiotic resistance genes alternation in soils modified with neutral and alkaline salts: interplay of salinity stress and response strategies of microbes
Yi Xu, Guoxiang You, Mairan Zhang, Dengyun Peng, Zewei Jiang, Suting Qi, Shihong Yang, Jun Hou
Science of The Total Environment.2022; 809: 152246. CrossRef - Hiệu quả của phân hữu cơ phối trộn tươi từ bèo hoa dâu (Azolla carolinian) và các vật liệu hữu cơ khác lên sinh trưởng và năng suất lúa trên nền đất nhiễm mặn ở điều kiện nhà lưới
Cao Thơ Nguyễn, Võ Hải Đường Trần, Khởi Nghĩa Nguyễn
Can Tho University Journal of Science.2022; 58(4): 143. CrossRef - Distribution of Burkholderia pseudomallei within a 300-cm deep soil profile: implications for environmental sampling
Khemngeun Pongmala, Alain Pierret, Priscia Oliva, Anne Pando, Viengmon Davong, Sayaphet Rattanavong, Norbert Silvera, Manophab Luangraj, Laurie Boithias, Khampaseuth Xayyathip, Ludovic Menjot, Melina Macouin, Emma Rochelle-Newall, Henri Robain, Amphone Vo
Scientific Reports.2022;[Epub] CrossRef - Influence of Rosaceous Species and Driving Factors on Differentiation of Rhizospheric Bacteria in a Deciduous Broad-Leaved Forest
Yukun Wang, Yuran He, Mao Ding, Zhi Wang, Shoubiao Zhou
Current Microbiology.2022;[Epub] CrossRef - The Deterioration of Agronomical Traits of the Continuous Cropping of Stevia Is Associated With the Dynamics of Soil Bacterial Community
Xinjuan Xu, Qingyun Luo, Qichao Wei, Shangtao Jiang, Caixia Dong, Mohammad Omar Faruque, Zhongwen Huang, Zhenghua Xu, Changxi Yin, Zaibiao Zhu, Xuebo Hu
Frontiers in Microbiology.2022;[Epub] CrossRef - Cu and Zn exert a greater influence on antibiotic resistance and its transfer than doxycycline in agricultural soils
Na Li, Jianguo Chen, Chong Liu, Jiaxun Yang, Changxiong Zhu, Hongna Li
Journal of Hazardous Materials.2022; 423: 127042. CrossRef - Assessment of Fertilizer Quality in Horse Waste-Based Bokashi Fertilizer Formulations
Auwalu Garba Gashua, Zulkefly Sulaiman, Martini Mohammad Yusoff, Mohd Yusoff Abd Samad, Mohd Fauzi Ramlan, Monsuru Adekunle Salisu
Agronomy.2022; 12(4): 937. CrossRef - Effects of earthworms and arbuscular mycorrhizal fungi on improvement of fertility and microbial communities of soils heavily polluted by cadmium
Gen Wang, Li Wang, Fang Ma
Chemosphere.2022; 286: 131567. CrossRef - Bacterial Community with Plant Growth-Promoting Potential Associated to Pioneer Plants from an Active Mexican Volcanic Complex
Clara Ivette Rincón-Molina, Esperanza Martínez-Romero, José Luis Aguirre-Noyola, Luis Alberto Manzano-Gómez, Adalberto Zenteno-Rojas, Marco Antonio Rogel, Francisco Alexander Rincón-Molina, Víctor Manuel Ruíz-Valdiviezo, Reiner Rincón-Rosales
Microorganisms.2022; 10(8): 1568. CrossRef - Influences of land reclamation on soil bacterial communities of abandoned salt pans in the Yellow River Delta
Yihao Zhu, Xiliang Song, Xiaoli Liu, Weifeng Chen, Xuchang Niu, Weizhi Zhou
Land Degradation & Development.2022; 33(16): 3231. CrossRef - Physico-Chemical and microbiological analysis of the loopspruit river, north west province: A metagenomic approach
Lohan Bredenhann, Daniel La Grange, Carlos Bezuidenhout, Lesego Molale-Tom
Water Supply.2022;[Epub] CrossRef - Long-Term Effect of Alkali and Partially Neutralized Irrigation Water on Soil Quality
Awtar Singh, Arvind Kumar, Rajender Kumar Yadav, Paramjit Singh Minhas, Upasana Saini
Journal of Soil Science and Plant Nutrition.2022; 22(2): 1252. CrossRef - Impacts of disinfected wastewater irrigation on soil characteristics, microbial community composition, and crop yield
Lays Paulino Leonel, Ariane Bize, Mahendra Mariadassou, Cédric Midoux, Jerusa Schneider, Adriano Luiz Tonetti
Blue-Green Systems.2022; 4(2): 247. CrossRef - Reduced Chemical Fertilizer Combined With Bio-Organic Fertilizer Affects the Soil Microbial Community and Yield and Quality of Lettuce
Ning Jin, Li Jin, Shuya Wang, Jinwu Li, Fanhong Liu, Zeci Liu, Shilie Luo, Yue Wu, Jian Lyu, Jihua Yu
Frontiers in Microbiology.2022;[Epub] CrossRef - Optimization of carriers and packaging for effective biofertilizers to enhance Oryza sativa L. growth in paddy soil
Jakkapan Sakpirom, Tomorn Nunkaew, Eakalak Khan, Duangporn Kantachote
Rhizosphere.2021; 19: 100383. CrossRef - Improved immobilization of soil cadmium by regulating soil characteristics and microbial community through reductive soil disinfestation
Xin Li, Xuefeng Li, Yueyue Li, Xiongze Dai, Qingzhuang Zhang, Mi Zhang, Zhuqing Zhang, Yu Tao, Wenchao Chen, Mingxing Zhang, Xiangyu Zhou, Sha Yang, Yanqing Ma, Mostafa Zhran, Xuexiao Zou
Science of The Total Environment.2021; 778: 146222. CrossRef - Soil bacterial community functions and distribution after mining disturbance
Enzong Xiao, Zengping Ning, Tangfu Xiao, Weimin Sun, Shiming Jiang
Soil Biology and Biochemistry.2021; 157: 108232. CrossRef - Pilot Study of Eco-Physiological Pepper Responses to Starfish-Based Organic Soil Amendments in Open-Field and Greenhouse Cultivations
Hyun-Sug Choi
Horticulturae.2021; 7(10): 344. CrossRef - Effects of the Denitrification Inhibitor “Procyanidins” on the Diversity, Interactions, and Potential Functions of Rhizosphere-Associated Microbiome
Mylène Hugoni, William Galland, Solène Lecomte, Maxime Bruto, Mohamed Barakat, Florence Piola, Wafa Achouak, Feth el Zahar Haichar
Microorganisms.2021; 9(7): 1406. CrossRef - Prospective usage of magnesium potassium phosphate cement combined with Bougainvillea alba derived biochar to reduce Pb bioavailability in soil and its uptake by Spinacia oleracea L
Iqbal Naeem, Nasir Masood, Veysel Turan, Muhammad Iqbal
Ecotoxicology and Environmental Safety.2021; 208: 111723. CrossRef - Impacto ambiental del vertimiento de aguas servidas en aglomerados urbanos ilegales del municipio de Villavicencio, Colombia
Fabián Dario Cuadros Segura, Alvaro Javier Moyano Salcedo, Adrian Mateo Pabon Laverde, Jassbleydi Valentina Trujillo Arias
Tecnura.2021; 25(68): 43. CrossRef - Efficacy of chitosan-coated textile waste biochar applied to Cd-polluted soil for reducing Cd mobility in soil and its distribution in moringa (Moringa oleifera L.)
Muhammad Zubair, Pia Muhammad Adnan Ramzani, Bilal Rasool, Muhammad Asaf Khan, Mahmood ur-Rahman, Imran Akhtar, Veysel Turan, Hafiz Muhammad Tauqeer, Muniba Farhad, Shahbaz Ali Khan, Javed Iqbal, Muhammad Iqbal
Journal of Environmental Management.2021; 284: 112047. CrossRef - The effects of vermicompost and shell powder addition on Cd bioavailability, enzyme activity and bacterial community in Cd-contaminated soil: A field study
Feng Wang, Weiwen Zhang, Lijuan Miao, Tianwei Ji, Yifan Wang, Hangjun Zhang, Ying Ding, Weiqin Zhu
Ecotoxicology and Environmental Safety.2021; 215: 112163. CrossRef - Diversity, structure, and composition of plant growth-promoting bacteria in soil from Brazilian Cerrado
Jailson do Nascimento Silva, Lucas William Mendes, Jadson Emanuel Lopes Antunes, Vania Maria Maciel Melo, Francisca Andrea da Silva Oliveira, Angela Celis de Almeida Lopes, Veronica Brito da Silva, Arthur Prudêncio de Araujo Pereira, Sergio Emilio Santos
Rhizosphere.2021; 20: 100435. CrossRef - Bioaccumulation of heavy metals in Stachys inflata and Scariola orientalis affected by particulate matters of a cement factory in central Iran
Hossein Moradi, Mohammad Abbasi, Mohsen Soleimani
Environmental Science and Pollution Research.2021; 28(32): 44098. CrossRef - Changes in rhizosphere microbial diversity and composition due to NaCl addition to the soil modify the outcome of maize-weed interactions
Larissa Cassemiro Pacheco Monteiro, Christiano da Conceição de Matos, Amarilson de Oliveira Cândido, Tiago Antônio de Oliveira Mendes, Mateus Ferreira Santana, Maurício Dutra Costa
Applied Soil Ecology.2021; 159: 103818. CrossRef - Different Responses of Soil Environmental Factors, Soil Bacterial Community, and Root Performance to Reductive Soil Disinfestation and Soil Fumigant Chloropicrin
Yu Zhan, Ning Yan, Xinyue Miao, Qiong Li, Changbao Chen
Frontiers in Microbiology.2021;[Epub] CrossRef - Farmer Friendly Options for Sterilizing Farm Tools for the Control of Xanthomonas Wilt Disease of Banana
Walter Ocimati, Anthony Fredrick Tazuba, Guy Blomme
Frontiers in Agronomy.2021;[Epub] CrossRef - Green Fluorescent Protein-Tagged Bacillus axarquiensis TUBP1 Reduced Cotton Verticillium Wilt Incidence by Altering Soil Rhizosphere Microbial Communities
Chang Gao, Bo Wang, Guo-cai Ma, Hong Zeng
Current Microbiology.2021; 78(9): 3562. CrossRef - Effect of Bacillus mesonae H20-5 Treatment on Rhizospheric Bacterial Community of Tomato Plants under Salinity Stress
Shin Ae Lee, Hyeon Su Kim, Mee Kyung Sang, Jaekyeong Song, Hang-Yeon Weon
The Plant Pathology Journal.2021; 37(6): 662. CrossRef - Study on the Rhizosphere Soil Microbial Community Structure Associated with Five Land Use Types in Jinchuan Mining Area
Tian-Peng Gao, Jing-Wen Fu, Ming-Bo Zuo, Yu-Bing Liu, Dang-Hui Xu, Guo-Hua Chang, Xi-Sheng Tai, Bing Yue, Zhuo-Xin Yin, Qing Zhang, R. Weerasinghe, C. Fang
E3S Web of Conferences.2021; 237: 01010. CrossRef - Chemical fertilizer reduction with organic fertilizer effectively improve soil fertility and microbial community from newly cultivated land in the Loess Plateau of China
Jianqiao Han, Yunyun Dong, Man Zhang
Applied Soil Ecology.2021; 165: 103966. CrossRef - Rhizosphere Microbiome Regulates the Growth of Mustard under Organic Greenhouse Cultivation
Ting-Chung Liu, Hui-Mei Peng, Seth Wollney, Chang-Hui Shen
Agriculture.2021; 11(10): 987. CrossRef - Culture-dependent and culture-independent characterization of bacterial community diversity in different types of sandy lands: the case of Minqin County, China
Yali Wei, Fang Wang, Jiangli Gao, Yaolong Huang, Wei Ren, Hongmei Sheng
BMC Microbiology.2021;[Epub] CrossRef - Application of wood ash leads to strong vertical gradients in soil pH changing prokaryotic community structure in forest top soil
Toke Bang-Andreasen, Mette Peltre, Lea Ellegaard-Jensen, Lars Hestbjerg Hansen, Morten Ingerslev, Regin Rønn, Carsten Suhr Jacobsen, Rasmus Kjøller
Scientific Reports.2021;[Epub] CrossRef - Effects of an additive (hydroxyapatite–bentonite–biochar) on Cd and Pb stabilization and microbial community composition in contaminated vegetable soil
Di Zhang, Ting Li, Aifang Ding, Xiaoxia Wu
RSC Advances.2021; 11(20): 12200. CrossRef - The effect of Soil properties on the Biological Diversity of Fungi in Soil University of Anbar.
Wijdan Ahmed Ali, Rahaf Haineed Hussein, Wafaa Tali Radef
Journal of Physics: Conference Series.2021; 2114(1): 012068. CrossRef - Effects of continuous cropping of Pinellia ternata (Thunb.) Breit. on soil physicochemical properties, enzyme activities, microbial communities and functional genes
Yuan Zhao, Xiao–Meng Qin, Xue–Ping Tian, Tao Yang, Rong Deng, Jun Huang
Chemical and Biological Technologies in Agriculture.2021;[Epub] CrossRef - Effects of microbial bio-fertilizers on soil physicochemical properties under different soil water regimes in greenhouse grown eggplant (Solanum Melongena L.)
Zeynep Demir
Communications in Soil Science and Plant Analysis.2020; 51(14): 1888. CrossRef - Rare rather than abundant microbial communities drive the effects of long-term greenhouse cultivation on ecosystem functions in subtropical agricultural soils
Mengdi Xue, Zhiying Guo, Xinyun Gu, Hailun Gao, Shimei Weng, Jing Zhou, Daguo Gu, Huixiang Lu, Xiaoqi Zhou
Science of The Total Environment.2020; 706: 136004. CrossRef - Electrophysical and geoinformational methods of mapping the biological properties of peats
Antonina D. Pozdnyakova, Lev A. Pozdnyakov
Dokuchaev Soil Bulletin.2020; (103): 149. CrossRef - Chitosan with Bentonite and Biochar in Ni-Affected Soil Reduces Grain Ni Concentrations, Improves Soil Enzymes and Grain Quality in Lentil
Hafiz Syed Tanzeem-ul-Haq, Bilal Rasool, Syed Ehtisham-ul-Haque, Sadia Saif, Sadia Zafar, Tahira Younis, Imran Akhtar, Laila Jafri, Naeem Iqbal, Nasir Masood, Karolina Lewińska, Muhammad Iqbal
Minerals.2020; 11(1): 11. CrossRef - Structural and functional responses of bacterial and fungal communities to multiple heavy metal exposure in arid loess
Xiao-Ying Zeng, Shi-Weng Li, Yan Leng, Xiao-Hu Kang
Science of The Total Environment.2020; 723: 138081. CrossRef - Role of biochar and organic substrates in enhancing the functional characteristics and microbial community in a saline soil
M.R.K. Manasa, Naveen Reddy Katukuri, Sree Sankar Darveekaran Nair, Yang Haojie, Zhiman Yang, Rong bo Guo
Journal of Environmental Management.2020; 269: 110737. CrossRef - Differences of the microbial community structures and predicted metabolic potentials in the lake, river, and wetland sediments in Dongping Lake Basin
Jiaohui Fang, Ruirui Yang, Qingqing Cao, Junyu Dong, Changchao Li, Quan Quan, Miansong Huang, Jian Liu
Environmental Science and Pollution Research.2020; 27(16): 19661. CrossRef - Utilization of marigold (Tagetes erecta) flower fermentation wastewater as a fertilizer and its effect on microbial community structure in maize rhizosphere and non-rhizosphere soil
Hongwei Liu, Yana Wang, Cong Liang, Qingxia Yang, Shuai Wang, Buqing Wang, Feiyan Zhang, Liping Zhang, Huicai Cheng, Shuishan Song, Liping Zhang
Biotechnology & Biotechnological Equipment.2020; 34(1): 522. CrossRef - Responses of a semi-natural grassland community of tropical region to elevated ozone: An assessment of soil dynamics and biomass accumulation
Tsetan Dolker, Arideep Mukherjee, Shashi Bhushan Agrawal, Madhoolika Agrawal
Science of The Total Environment.2020; 718: 137141. CrossRef - Analysis of bacterial and fungal communities in continuous-cropping ramie (Boehmeria nivea L. Gaud) fields in different areas in China
Yanzhou Wang, Xiaomin Xu, Touming Liu, Hongwu Wang, Yan Yang, Xiaorong Chen, Siyuan Zhu
Scientific Reports.2020;[Epub] CrossRef - Diversity of rhizosphere and endophytic fungi in Atractylodes macrocephala during continuous cropping
Bo Zhu, Jianjun Wu, Qingyong Ji, Wei Wu, Shihui Dong, Jiayan Yu, Qiaoyan Zhang, Luping Qin
PeerJ.2020; 8: e8905. CrossRef - The invader Carpobrotus edulis promotes a specific rhizosphere microbiome across globally distributed coastal ecosystems
G. Rodríguez-Caballero, F. Caravaca, G. Díaz, P. Torres, A. Roldán
Science of The Total Environment.2020; 719: 137347. CrossRef - Variation in the composition of the microbial community in the rhizosphere of potato plants depending on cropping season, cultivar type, and plant development stage
Rania AYDİ BEN ABDALLAH, Hayfa JABNOUN-KHİAREDDİNE, Mejda DAAMİ-REMADİ
International Journal of Agriculture Environment and Food Sciences.2020; 4(3): 319. CrossRef - Different types of agricultural land use drive distinct soil bacterial communities
Shin Ae Lee, Jeong Myeong Kim, Yiseul Kim, Jae-Ho Joa, Seong-Soo Kang, Jae-Hyung Ahn, Mincheol Kim, Jaekyeong Song, Hang-Yeon Weon
Scientific Reports.2020;[Epub] CrossRef - Total RNA sequencing reveals multilevel microbial community changes and functional responses to wood ash application in agricultural and forest soil
Toke Bang-Andreasen, Muhammad Zohaib Anwar, Anders Lanzén, Rasmus Kjøller, Regin Rønn, Flemming Ekelund, Carsten Suhr Jacobsen
FEMS Microbiology Ecology.2020;[Epub] CrossRef - Changes in soil microbial communities at Jinsha earthen site are associated with earthen site deterioration
Jing Li, Xiaoyue Zhang, Lin Xiao, Ke Liu, Yue Li, Ziwei Zhang, Qiang Chen, Xiaolin Ao, Decong Liao, Yunfu Gu, Menggen Ma, Xiumei Yu, Quanju Xiang, Ji Chen, Xiaoping Zhang, Tao Yang, Petri Penttinen, Ke Zhao
BMC Microbiology.2020;[Epub] CrossRef - Microbial Diversity of Some Sabkha and Desert Sites in Saudi Arabia
Modhi O. Alotaibi, Hana S. Sonbol, Suaad S. Alwakeel, Rasha S. Suliman, Ramy A. Fodah, Ahmad S. Abu Jaffal, Nouf I. AlOthman, Afrah E. Mohammed
Saudi Journal of Biological Sciences.2020; 27(10): 2778. CrossRef - Responses of the rhizosphere bacterial community in acidic crop soil to pH: Changes in diversity, composition, interaction, and function
Wenjie Wan, Jiadan Tan, Yi Wang, Yin Qin, Huangmei He, Huiqin Wu, Wenlong Zuo, Donglan He
Science of The Total Environment.2020; 700: 134418. CrossRef - Decrease in diversity and shift in composition of the soil bacterial community were closely related to high available phosphorus in agricultural Fluvisols of North China
Chenxu Liu, Xiaorong Zhao, Qimei Lin, Guitong Li
Acta Agriculturae Scandinavica, Section B — Soil & Plant Science.2019; 69(7): 618. CrossRef - Soil aggregates regulate the impact of soil bacterial and fungal communities on soil respiration
Chao Yang, Nan Liu, Yingjun Zhang
Geoderma.2019; 337: 444. CrossRef - Bacterial community variations in paddy soils induced by application of veterinary antibiotics in plant-soil systems
Misbah Uddin, Jingwen Chen, Xianliang Qiao, Run Tian, Yasir Arafat, Xiaojing Yang
Ecotoxicology and Environmental Safety.2019; 167: 44. CrossRef - Effects of recent fire on soil conditions and nutrient use of a native and an invasive grass in the Brazilian savanna
Erico Fernando Lopes Pereira-Silva, Elisa Hardt, Murilo Bellato Biral, Victor Camargo Keller, Welington Braz Carvalho Delitti
Écoscience.2019; 26(4): 359. CrossRef - Identification of Microbial Profiles in Heavy-Metal-Contaminated Soil from Full-Length 16S rRNA Reads Sequenced by a PacBio System
Moonsuk Hur, Soo-Je Park
Microorganisms.2019; 7(9): 357. CrossRef - Effects of Pretreatment Methods of Wheat Straw on Adsorption of Cd(II) from Waterlogged Paddy Soil
Mengjie Wu, Hongyu Liu, Chunping Yang
International Journal of Environmental Research and Public Health.2019; 16(2): 205. CrossRef - A preliminary examination of bacterial, archaeal, and fungal communities inhabiting different rhizocompartments of tomato plants under real-world environments
Shin Ae Lee, Yiseul Kim, Jeong Myeong Kim, Bora Chu, Jae-Ho Joa, Mee Kyung Sang, Jaekyeong Song, Hang-Yeon Weon
Scientific Reports.2019;[Epub] CrossRef - Soil Salinity and pH Drive Soil Bacterial Community Composition and Diversity Along a Lateritic Slope in the Avon River Critical Zone Observatory, Western Australia
Flora J. M. O’Brien, Maya Almaraz, Melissa A. Foster, Alice F. Hill, David P. Huber, Elizabeth K. King, Harry Langford, Mary-Anne Lowe, Bede S. Mickan, Valerie S. Miller, Oliver W. Moore, Falko Mathes, Deirdre Gleeson, Matthias Leopold
Frontiers in Microbiology.2019;[Epub] CrossRef - Effect of aridity and dune type on rhizosphere soil bacterial communities of Caragana microphylla in desert regions of northern China
Jiangli Gao, Yang Luo, Yali Wei, Yaolong Huang, Hua Zhang, Wenliang He, Hongmei Sheng, Lizhe An, Marie-Joelle Virolle
PLOS ONE.2019; 14(10): e0224195. CrossRef - Temporal variation of Q 10 values in response to changes in soil physiochemical properties caused by fairy rings
Chao Yang, Yingjun Zhang, Yuping Rong, Yixian Bei, Yuqi Wei, Nan Liu
European Journal of Soil Biology.2018; 86: 42. CrossRef - Soil productivity and structure of bacterial and fungal communities in unfertilized arable soil
Boxi Wang, Yoichi Adachi, Shuichi Sugiyama, Lorenzo Brusetti
PLOS ONE.2018; 13(9): e0204085. CrossRef - Effect of reclamation of abandoned salinized farmland on soil bacterial communities in arid northwest China
Zhibo Cheng, Yun Chen, Fenghua Zhang
Science of The Total Environment.2018; 630: 799. CrossRef - Composition and diversity of cyanobacteria-associated and free-living bacterial communities during cyanobacterial blooms
Leighannah N. Akins, Paul Ayayee, Laura G. Leff
Annals of Microbiology.2018; 68(8): 493. CrossRef - Modeling soil acidification in typical Chinese cropping systems
Qichao Zhu, Xuejun Liu, Tianxiang Hao, Mufan Zeng, Jianbo Shen, Fusuo Zhang, Wim De Vries
Science of The Total Environment.2018; 613-614: 1339. CrossRef - Macro and Microelements Drive Diversity and Composition of Prokaryotic and Fungal Communities in Hypersaline Sediments and Saline–Alkaline Soils
Kaihui Liu, Xiaowei Ding, Xiaofei Tang, Jianjun Wang, Wenjun Li, Qingyun Yan, Zhenghua Liu
Frontiers in Microbiology.2018;[Epub] CrossRef - Shift of soil bacterial community and decrease of metals bioavailability after immobilization of a multi-metal contaminated acidic soil by inorganic-organic mixed amendments: A field study
Li-min Huang, Guang-wei Yu, Fu-zhen Zou, Xin-xian Long, Qi-tang Wu
Applied Soil Ecology.2018; 130: 104. CrossRef - Wood Ash Induced pH Changes Strongly Affect Soil Bacterial Numbers and Community Composition
Toke Bang-Andreasen, Jeppe T. Nielsen, Jana Voriskova, Janine Heise, Regin Rønn, Rasmus Kjøller, Hans C. B. Hansen, Carsten S. Jacobsen
Frontiers in Microbiology.2017;[Epub] CrossRef - Comparisons of Soil Properties, Enzyme Activities and Microbial Communities in Heavy Metal Contaminated Bulk and Rhizosphere Soils of Robinia pseudoacacia L. in the Northern Foot of Qinling Mountain
Yurong Yang, Miao Dong, Yaping Cao, Jinlong Wang, Ming Tang, Yihui Ban
Forests.2017; 8(11): 430. CrossRef
Reviews
- REVIEW] When a Virus is not a Parasite: The Beneficial Effects of Prophages
-
Joseph Bondy-Denomy , Alan R. Davidson
-
J. Microbiol. 2014;52(3):235-242. Published online March 1, 2014
-
DOI: https://doi.org/10.1007/s12275-014-4083-3
-
-
48
View
-
0
Download
-
120
Crossref
-
Abstract
-
Most organisms on the planet have viruses that infect them. Viral infection may lead to cell death, or to a symbiotic relationship where the genomes of both virus and host replicate together. In the symbiotic state, both virus and cell potentially experience increased fitness as a result of the other. The viruses that infect bacteria, called bacteriophages (or phages), well exemplify the symbiotic relationships that can develop between viruses and their host. In this review, we will discuss the many ways that prophages, which are phage genomes integrated into the genomes of their hosts, influence bacterial behavior and virulence.
-
Citations
Citations to this article as recorded by

- Phage against the Machine: The SIE-ence of Superinfection Exclusion
Michael J. Bucher, Daniel M. Czyż
Viruses.2024; 16(9): 1348. CrossRef -
Molecular characteristics, fitness, and virulence of high-risk and non-high-risk clones of carbapenemase-producing
Klebsiella pneumoniae
Anni-Maria Örmälä-Tiznado, Lisa Allander, Makaoui Maatallah, Muhammad Humaun Kabir, Sylvain Brisse, Linus Sandegren, Sheetal Patpatia, Maarten Coorens, Christian G. Giske, Daria Van Tyne
Microbiology Spectrum.2024;[Epub] CrossRef - Lytic/Lysogenic Transition as a Life-History Switch
Joan Roughgarden
Virus Evolution.2024;[Epub] CrossRef - Presence of phage-plasmids in multiple serovars of Salmonella enterica
Satheesh Nair, Clare R. Barker, Matthew Bird, David R. Greig, Caitlin Collins, Anaïs Painset, Marie Chattaway, Derek Pickard, Lesley Larkin, Saheer Gharbia, Xavier Didelot, Paolo Ribeca
Microbial Genomics
.2024;[Epub] CrossRef - Snow viruses and their implications on red snow algal blooms
Adam R. Barno, Kevin Green, Forest Rohwer, Cynthia B. Silveira, Katrine Whiteson
mSystems.2024;[Epub] CrossRef - Prophages carrying Zot toxins on different Vibrio genomes: A comprehensive assessment using multilayer networks
Esteban F. Soto, Melissa Alegría, Felipe Sepúlveda, Katherine García, Gastón Higuera, Daniel Castillo, Francisco E. Fontúrbel, Roberto Bastías
Environmental Microbiology.2024;[Epub] CrossRef - Investigating the viral ecology and contribution to the microbial ecology in full-scale mesophilic anaerobic digesters
Bishav Bhattarai, Ananda Shankar Bhattacharjee, Felipe H. Coutinho, Ramesh Goel
Chemosphere.2024; 349: 140743. CrossRef - Soybean Bradyrhizobium spp. Spontaneously Produce Abundant and Diverse Temperate Phages in Culture
Vanessa A. Richards, Barbra D. Ferrell, Shawn W. Polson, K. Eric Wommack, Jeffry J. Fuhrmann
Viruses.2024; 16(11): 1750. CrossRef - Diverse Prophage Elements of Salmonella enterica Serovars Show Potential Roles in Bacterial Pathogenicity
Kirstie Andrews, Toby Landeryou, Thomas Sicheritz-Pontén, Janet Yakubu Nale
Cells.2024; 13(6): 514. CrossRef - The prophage-encoded transcriptional regulator AppY has pleiotropic effects on E. coli physiology
Naoual Derdouri, Nicolas Ginet, Yann Denis, Mireille Ansaldi, Aurélia Battesti, Melanie Blokesch
PLOS Genetics.2023; 19(3): e1010672. CrossRef - Improving phage therapy by evasion of phage resistance mechanisms
Inés Bleriot, Olga Pacios, Lucia Blasco, Laura Fernández-García, María López, Concha Ortiz-Cartagena, Antonio Barrio-Pujante, Rodolfo García-Contreras, Jean-Paul Pirnay, Thomas K Wood, María Tomás
JAC-Antimicrobial Resistance.2023;[Epub] CrossRef - A systematic analysis of marine lysogens and proviruses
Yi Yi, Shunzhang Liu, Yali Hao, Qingyang Sun, Xinjuan Lei, Yecheng Wang, Jiahua Wang, Mujie Zhang, Shan Tang, Qingxue Tang, Yue Zhang, Xipeng Liu, Yinzhao Wang, Xiang Xiao, Huahua Jian
Nature Communications.2023;[Epub] CrossRef - Investigation of Potassium Tetraborate Resistance in Dickeya spp.
Alice Lou
Cornell Undergraduate Research Journal.2023; 2(1): 28. CrossRef - Competition between lysogenic and sensitive bacteria is determined by the fitness costs of the different emerging phage-resistance strategies
Olaya Rendueles, Jorge AM de Sousa, Eduardo PC Rocha
eLife.2023;[Epub] CrossRef - Two novel Bartonella (sub)species isolated from edible dormice (Glis glis): hints of cultivation stress-induced genomic changes
Oldřich Bartoš, Běla Klimešová, Karolina Volfová, Martin Chmel, Jiří Dresler, Petr Pajer, Hana Kabíčková, Peter Adamík, David Modrý, Alena Myslivcová Fučíková, Jan Votýpka
Frontiers in Microbiology.2023;[Epub] CrossRef - Systematic analysis of prophage elements in actinobacterial genomes reveals a remarkable phylogenetic diversity
Vikas Sharma, Max Hünnefeld, Tom Luthe, Julia Frunzke
Scientific Reports.2023;[Epub] CrossRef - Occurrence and genetic diversity of prophage sequences identified in the genomes of L. casei group bacteria
Piotr Jarocki, Elwira Komoń-Janczara, Agata Młodzińska, Jan Sadurski, Kinga Kołodzińska, Łukasz Łaczmański, Jacek Panek, Magdalena Frąc
Scientific Reports.2023;[Epub] CrossRef - Novel virulent and temperate cyanophages predicted to infect Microcoleus associated with anatoxin‐producing benthic mats
Cecilio Valadez‐Cano, Adrian Reyes‐Prieto, Janice Lawrence
Environmental Microbiology.2023; 25(12): 3319. CrossRef - Bio-informatic analysis of CRISPR protospacer adjacent motifs (PAMs) in T4 genome
Omar Rawashdeh, Rabeah Y. Rawashdeh, Temesgen Kebede, David Kapp, Anca Ralescu
BMC Genomic Data.2022;[Epub] CrossRef - Insights into Gene Transcriptional Regulation of Kayvirus Bacteriophages Obtained from Therapeutic Mixtures
Sara Arroyo-Moreno, Colin Buttimer, Francesca Bottacini, Nina Chanishvili, Paul Ross, Colin Hill, Aidan Coffey
Viruses.2022; 14(3): 626. CrossRef - Prevalence, Diversity and UV-Light Inducibility Potential of Prophages in Bacillus subtilis and Their Possible Roles in Host Properties
Haftom Baraki Abraha, Youbin Choi, Woobin Hyun, Jae-Won Lee, Hai Seong Kang, Min Seo So, Donghyun Shin, Jong-Hyun Jung, Desta Berhe Sbhatu, Kwang-Pyo Kim
Viruses.2022; 14(3): 483. CrossRef - The Life Cycle Transitions of Temperate Phages: Regulating Factors and Potential Ecological Implications
Menghui Zhang, Tianyou Zhang, Meishun Yu, Yu-Lei Chen, Min Jin
Viruses.2022; 14(9): 1904. CrossRef - Accelerated Evolution by Diversity-Generating Retroelements
Benjamin R. Macadangdang, Sara K. Makanani, Jeff F. Miller
Annual Review of Microbiology.2022; 76(1): 389. CrossRef - Prophage: a crucial catalyst in infectious disease modulation
Roshan Nepal, Ghais Houtak, Peter-John Wormald, Alkis James Psaltis, Sarah Vreugde
The Lancet Microbe.2022; 3(3): e162. CrossRef -
Isolation of a virus causing a chronic infection in the archaeal model organism
Haloferax volcanii
reveals antiviral activities of a provirus
Tomas Alarcón-Schumacher, Adit Naor, Uri Gophna, Susanne Erdmann
Proceedings of the National Academy of Sciences.2022;[Epub] CrossRef - Anti-CRISPR proteins as a therapeutic agent against drug-resistant bacteria
Pallavi Vyas, Harish
Microbiological Research.2022; 257: 126963. CrossRef - Detection of an IMI-2 carbapenemase-producing Enterobacter asburiae at a Swedish feed mill
Stefan Börjesson, Michael S. M. Brouwer, Emma Östlund, Jenny Eriksson, Josefine Elving, Oskar Karlsson Lindsjö, Linda I. Engblom
Frontiers in Microbiology.2022;[Epub] CrossRef - Host life-history traits influence the distribution of prophages and the genes they carry
Tyler Pattenden, Christine Eagles, Lindi M. Wahl
Philosophical Transactions of the Royal Society B: Biological Sciences.2022;[Epub] CrossRef - Killing the competition: a theoretical framework for liver-stage malaria
Clemente F. Arias, Francisco J. Acosta, Cristina Fernandez-Arias
Open Biology.2022;[Epub] CrossRef - Analysis of intact prophages in genomes of Paenibacillus larvae: An important pathogen for bees
Henrique G. Ribeiro, Anna Nilsson, Luís D. R. Melo, Ana Oliveira
Frontiers in Microbiology.2022;[Epub] CrossRef - Landscape of mobile genetic elements and their antibiotic resistance cargo in prokaryotic genomes
Supriya Khedkar, Georgy Smyshlyaev, Ivica Letunic, Oleksandr M Maistrenko, Luis Pedro Coelho, Askarbek Orakov, Sofia K Forslund, Falk Hildebrand, Mechthild Luetge, Thomas S B Schmidt, Orsolya Barabas, Peer Bork
Nucleic Acids Research.2022; 50(6): 3155. CrossRef - Comparative genome analysis of Vagococcus fluvialis reveals abundance of mobile genetic elements in sponge-isolated strains
Ana Rodriguez Jimenez, Nadège Guiglielmoni, Lise Goetghebuer, Etienne Dechamps, Isabelle F. George, Jean-François Flot
BMC Genomics.2022;[Epub] CrossRef - Higher phage virulence accelerates the evolution of host resistance
Carolin C. Wendling, Janina Lange, Heiko Liesegang, Michael Sieber, Anja Poehlein, Boyke Bunk, Jelena Rajkov, Henry Goehlich, Olivia Roth, Michael A. Brockhurst
Proceedings of the Royal Society B: Biological Sciences.2022;[Epub] CrossRef - An overview on Vibrio temperate phages: Integration mechanisms, pathogenicity, and lysogeny regulation
Zaatout Nawel, Ouchene Rima, Bouaziz Amira
Microbial Pathogenesis.2022; 165: 105490. CrossRef - Selective Isolation of Eggerthella lenta from Human Faeces and Characterisation of the Species Prophage Diversity
Colin Buttimer, Francesca Bottacini, Andrey N. Shkoporov, Lorraine A. Draper, Paul Ross, Colin Hill
Microorganisms.2022; 10(1): 195. CrossRef - Mutualistic interplay between bacteriophages and bacteria in the human gut
Andrey N. Shkoporov, Christopher J. Turkington, Colin Hill
Nature Reviews Microbiology.2022; 20(12): 737. CrossRef - Competition Between Phage-Resistance Mechanisms Determines the Outcome of Bacterial Co-Existence
Olaya Rendueles, Jorge A.M. de Sousa, Eduardo P.C. Rocha
SSRN Electronic Journal .2022;[Epub] CrossRef - Viruses in Subsurface Environments
Jennifer Wirth, Mark Young
Annual Review of Virology.2022; 9(1): 99. CrossRef - Genomic Analysis Unveils the Pervasiveness and Diversity of Prophages Infecting Erwinia Species
Tulio Morgan, Rafael Reis de Rezende, Thamylles Thuany Mayrink Lima, Flávia de Oliveira Souza, Poliane Alfenas-Zerbini
Pathogens.2022; 12(1): 44. CrossRef - Engineered Bacteriophage Therapeutics: Rationale, Challenges and Future
Małgorzata Łobocka, Krystyna Dąbrowska, Andrzej Górski
BioDrugs.2021; 35(3): 255. CrossRef - Fitness benefits to bacteria of carrying prophages and prophage‐encoded antibiotic‐resistance genes peak in different environments
Carolin C. Wendling, Dominik Refardt, Alex R. Hall
Evolution.2021; 75(2): 515. CrossRef - Towards the Characterization and Engineering of Bacteriophages in the Gut Microbiome
Bryan B. Hsu
mSystems.2021;[Epub] CrossRef - Bacteriophages as drivers of bacterial virulence and their potential for biotechnological exploitation
Kaat Schroven, Abram Aertsen, Rob Lavigne
FEMS Microbiology Reviews.2021;[Epub] CrossRef - Temperate Bacteriophages—The Powerful Indirect Modulators of Eukaryotic Cells and Immune Functions
Martyna Cieślik, Natalia Bagińska, Ewa Jończyk-Matysiak, Alicja Węgrzyn, Grzegorz Węgrzyn, Andrzej Górski
Viruses.2021; 13(6): 1013. CrossRef - Extending the natural adaptive capacity of coral holobionts
Christian R. Voolstra, David J. Suggett, Raquel S. Peixoto, John E. Parkinson, Kate M. Quigley, Cynthia B. Silveira, Michael Sweet, Erinn M. Muller, Daniel J. Barshis, David G. Bourne, Manuel Aranda
Nature Reviews Earth & Environment.2021; 2(11): 747. CrossRef - Revisiting the rules of life for viruses of microorganisms
Adrienne M. S. Correa, Cristina Howard-Varona, Samantha R. Coy, Alison Buchan, Matthew B. Sullivan, Joshua S. Weitz
Nature Reviews Microbiology.2021; 19(8): 501. CrossRef - The landscape of lysogeny across microbial community density, diversity and energetics
Cynthia B. Silveira, Antoni Luque, Forest Rohwer
Environmental Microbiology.2021; 23(8): 4098. CrossRef - Exploring Codon Adjustment Strategies towards Escherichia coli-Based Production of Viral Proteins Encoded by HTH1, a Novel Prophage of the Marine Bacterium Hypnocyclicus thermotrophus
Hasan Arsın, Andrius Jasilionis, Håkon Dahle, Ruth-Anne Sandaa, Runar Stokke, Eva Nordberg Karlsson, Ida Helene Steen
Viruses.2021; 13(7): 1215. CrossRef - Stable Neutralization of a Virulence Factor in Bacteria Using Temperate Phage in the Mammalian Gut
Bryan B. Hsu, Jeffrey C. Way, Pamela A. Silver, Jack A. Gilbert
mSystems.2020;[Epub] CrossRef - RETRACTED ARTICLE: Cryptic prophages in a blaNDM-1-bearing plasmid increase bacterial survival against high NaCl concentration, high and low temperatures, and oxidative and immunological stressors
So Yeon Kim, Kwan Soo Ko
Journal of Microbiology.2020; 58(6): 483. CrossRef - The Russian Doll Model: How Bacteria Shape Successful and Sustainable Inter-Kingdom Relationships
Enrica Pessione
Frontiers in Microbiology.2020;[Epub] CrossRef - In situ reprogramming of gut bacteria by oral delivery
Bryan B. Hsu, Isaac N. Plant, Lorena Lyon, Frances M. Anastassacos, Jeffrey C. Way, Pamela A. Silver
Nature Communications.2020;[Epub] CrossRef - Genetically similar temperate phages form coalitions with their shared host that lead to niche-specific fitness effects
Jonelle T R Basso, Nana Y D Ankrah, Matthew J Tuttle, Alex S Grossman, Ruth-Anne Sandaa, Alison Buchan
The ISME Journal.2020; 14(7): 1688. CrossRef - The enemy from within: a prophage of Roseburia intestinalis systematically turns lytic in the mouse gut, driving bacterial adaptation by CRISPR spacer acquisition
Jeffrey K Cornuault, Elisabeth Moncaut, Valentin Loux, Aurélie Mathieu, Harry Sokol, Marie-Agnès Petit, Marianne De Paepe
The ISME Journal.2020; 14(3): 771. CrossRef - A Biological Inventory of Prophages in A. baumannii Genomes Reveal Distinct Distributions in Classes, Length, and Genomic Positions
Belinda Loh, Jiayuan Chen, Prasanth Manohar, Yunsong Yu, Xiaoting Hua, Sebastian Leptihn
Frontiers in Microbiology.2020;[Epub] CrossRef - Quantifying the forces that maintain prophages in bacterial genomes
Amjad Khan, Lindi M. Wahl
Theoretical Population Biology.2020; 133: 168. CrossRef - Anti-CRISPRs: Protein Inhibitors of CRISPR-Cas Systems
Alan R. Davidson, Wang-Ting Lu, Sabrina Y. Stanley, Jingrui Wang, Marios Mejdani, Chantel N. Trost, Brian T. Hicks, Jooyoung Lee, Erik J. Sontheimer
Annual Review of Biochemistry.2020; 89(1): 309. CrossRef - Lysogeny in the oceans: Lessons from cultivated model systems and a reanalysis of its prevalence
Matthew J. Tuttle, Alison Buchan
Environmental Microbiology.2020; 22(12): 4919. CrossRef - The Principles, Mechanisms, and Benefits of Unconventional Agents in the Treatment of Biofilm Infection
Jasminka Talapko, Ivana Škrlec
Pharmaceuticals.2020; 13(10): 299. CrossRef - Looking for the hidden: Characterization of lysogenic phages in potential pathogenic Vibrio species from the North Sea
Ale Garin-Fernandez, Antje Wichels
Marine Genomics.2020; 51: 100725. CrossRef - Phage integration alters the respiratory strategy of its host
Jeffrey N Carey, Erin L Mettert, Daniel R Fishman-Engel, Manuela Roggiani, Patricia J Kiley, Mark Goulian
eLife.2019;[Epub] CrossRef - Mining, analyzing, and integrating viral signals from metagenomic data
Tingting Zheng, Jun Li, Yueqiong Ni, Kang Kang, Maria-Anna Misiakou, Lejla Imamovic, Billy K. C. Chow, Anne A. Rode, Peter Bytzer, Morten Sommer, Gianni Panagiotou
Microbiome.2019;[Epub] CrossRef - Mobilome and Resistome Reconstruction from Genomes Belonging to Members of the Bifidobacterium Genus
Walter Mancino, Gabriele Andrea Lugli, Douwe van Sinderen, Marco Ventura, Francesca Turroni
Microorganisms.2019; 7(12): 638. CrossRef - Viral Regulation on Bacterial Community Impacted by Lysis-Lysogeny Switch: A Microcosm Experiment in Eutrophic Coastal Waters
Xiaowei Chen, Ruijie Ma, Yunlan Yang, Nianzhi Jiao, Rui Zhang
Frontiers in Microbiology.2019;[Epub] CrossRef - Prophages enhance resistance to antibiotic stress in a blaNDM-1-carrying bacterial host: authors’ reply
So Yeon Kim, Kwan Soo Ko
International Journal of Antimicrobial Agents.2019; 54(2): 267. CrossRef - The prevalence and impact of lysogeny among oral isolates ofEnterococcus faecalis
Roy H. Stevens, Hongming Zhang, Christine Sedgley, Adam Bergman, Anil Reddy Manda
Journal of Oral Microbiology.2019; 11(1): 1643207. CrossRef - Genomic and Proteomic Characterization of Bacteriophage BH1 Spontaneously Released from Probiotic Lactobacillus rhamnosus Pen
Piotr Jarocki, Elwira Komoń-Janczara, Marcin Podleśny, Oleksandr Kholiavskyi, Monika Pytka, Monika Kordowska-Wiater
Viruses.2019; 11(12): 1163. CrossRef - Impact of Xenogeneic Silencing on Phage–Host Interactions
Eugen Pfeifer, Max Hünnefeld, Ovidiu Popa, Julia Frunzke
Journal of Molecular Biology.2019; 431(23): 4670. CrossRef - Biotransformation of 2,4-dinitrotoluene by the beneficial association of engineered Pseudomonas putida with Arabidopsis thaliana
Özlem Akkaya, Ebru Arslan
3 Biotech.2019;[Epub] CrossRef - Prophages in Lactobacillus reuteri Are Associated with Fitness Trade-Offs but Can Increase Competitiveness in the Gut Ecosystem
Jee-Hwan Oh, Xiaoxi B. Lin, Shenwei Zhang, Stephanie L. Tollenaar, Mustafa Özçam, Case Dunphy, Jens Walter, Jan-Peter van Pijkeren, Maia Kivisaar
Applied and Environmental Microbiology.2019;[Epub] CrossRef - Big Impact of the Tiny: Bacteriophage–Bacteria Interactions in Biofilms
Mads Frederik Hansen, Sine Lo Svenningsen, Henriette Lyng Røder, Mathias Middelboe, Mette Burmølle
Trends in Microbiology.2019; 27(9): 739. CrossRef -
Cryptic-Prophage-Encoded Small Protein DicB Protects
Escherichia coli
from Phage Infection by Inhibiting Inner Membrane Receptor Proteins
Preethi T. Ragunathan, Carin K. Vanderpool, George O'Toole
Journal of Bacteriology.2019;[Epub] CrossRef - Bacteriophages benefit from generalized transduction
Alfred Fillol-Salom, Ahlam Alsaadi, Jorge A. Moura de Sousa, Li Zhong, Kevin R. Foster, Eduardo P. C. Rocha, José R. Penadés, Hanne Ingmer, Jakob Haaber, Michael Otto
PLOS Pathogens.2019; 15(7): e1007888. CrossRef - Optimality of the spontaneous prophage induction rate
Michael G. Cortes, Jonathan Krog, Gábor Balázsi
Journal of Theoretical Biology.2019; 483: 110005. CrossRef - Characterization of a Highly Virulent Edwardsiella anguillarum Strain Isolated From Greek Aquaculture, and a Spontaneously Induced Prophage Therein
Pantelis Katharios, Panos G. Kalatzis, Constantina Kokkari, Michail Pavlidis, Qiyao Wang
Frontiers in Microbiology.2019;[Epub] CrossRef - The dual lifestyle of genome‐integrating virophages in protists
Mónica Berjón‐Otero, Anna Koslová, Matthias G. Fischer
Annals of the New York Academy of Sciences.2019; 1447(1): 97. CrossRef - A Viral Ecogenomics Framework To Uncover the Secrets of Nature’s “Microbe Whisperers”
Simon Roux
mSystems.2019;[Epub] CrossRef - RETRACTED: Effects of prophage regions in a plasmid carrying a carbapenemase gene on survival against antibiotic stress
So Yeon KIM, Kwan Soo KO
International Journal of Antimicrobial Agents.2019; 53(1): 89. CrossRef - May the Phage be With You? Prophage-Like Elements in the Genomes of Soft Rot Pectobacteriaceae: Pectobacterium spp. and Dickeya spp.
Robert Czajkowski
Frontiers in Microbiology.2019;[Epub] CrossRef - Evolution of Immune Systems From Viruses and Transposable Elements
Felix Broecker, Karin Moelling
Frontiers in Microbiology.2019;[Epub] CrossRef - Can a Symbiont (Also) Be Food?
Kim L. Hoang, Levi T. Morran, Nicole M. Gerardo
Frontiers in Microbiology.2019;[Epub] CrossRef - Bacteriophage Interactions with Marine Pathogenic Vibrios: Implications for Phage Therapy
Panos Kalatzis, Daniel Castillo, Pantelis Katharios, Mathias Middelboe
Antibiotics.2018; 7(1): 15. CrossRef - Cupriavidus metallidurans Strains with Different Mobilomes and from Distinct Environments Have Comparable Phenomes
Rob Van Houdt, Ann Provoost, Ado Van Assche, Natalie Leys, Bart Lievens, Kristel Mijnendonckx, Pieter Monsieurs
Genes.2018; 9(10): 507. CrossRef - Food Spoilage-Associated Leuconostoc, Lactococcus, and Lactobacillus Species Display Different Survival Strategies in Response to Competition
Margarita Andreevskaya, Elina Jääskeläinen, Per Johansson, Anne Ylinen, Lars Paulin, Johanna Björkroth, Petri Auvinen, Harold L. Drake
Applied and Environmental Microbiology.2018;[Epub] CrossRef - Close Encounters of Three Kinds: Bacteriophages, Commensal Bacteria, and Host Immunity
Eric C. Keen, Gautam Dantas
Trends in Microbiology.2018; 26(11): 943. CrossRef - Pathogenomics of Virulence Traits of Plesiomonas shigelloides That Were Deemed Inconclusive by Traditional Experimental Approaches
Temitope C. Ekundayo, Anthony I. Okoh
Frontiers in Microbiology.2018;[Epub] CrossRef - Metagenomic Analysis of Bacteria, Fungi, Bacteriophages, and Helminths in the Gut of Giant Pandas
Shengzhi Yang, Xin Gao, Jianghong Meng, Anyun Zhang, Yingmin Zhou, Mei Long, Bei Li, Wenwen Deng, Lei Jin, Siyue Zhao, Daifu Wu, Yongguo He, Caiwu Li, Shuliang Liu, Yan Huang, Hemin Zhang, Likou Zou
Frontiers in Microbiology.2018;[Epub] CrossRef - Spontaneously induced prophages are abundant in a naturally evolved bacterial starter culture and deliver competitive advantage to the host
Svetlana Alexeeva, Jesús Adrián Guerra Martínez, Maciej Spus, Eddy J. Smid
BMC Microbiology.2018;[Epub] CrossRef - Characterization of redundant tRNAIles with CAU and UAU anticodons in Lactobacillus plantarum
Chie Tomikawa, Sylvie Auxilien, Vincent Guérineau, Yuya Yoshioka, Kiyo Miyoshi, Hiroyuki Hori, Dominique Fourmy, Kazuyuki Takai, Satoko Yoshizawa
The Journal of Biochemistry.2018; 163(3): 233. CrossRef - Habitat Alterations by Viruses: Strategies by Tupanviruses and Others
Hiroyuki Ogata
Microbes and Environments.2018; 33(2): 117. CrossRef - Phages infecting Faecalibacterium prausnitzii belong to novel viral genera that help to decipher intestinal viromes
Jeffrey K. Cornuault, Marie-Agnès Petit, Mahendra Mariadassou, Leandro Benevides, Elisabeth Moncaut, Philippe Langella, Harry Sokol, Marianne De Paepe
Microbiome.2018;[Epub] CrossRef -
Whole-Genome Sequence of the Novel Temperate
Enterobacter
Bacteriophage Tyrion, Isolated from the Gut of the Formosan Subterranean Termite
Chinmay Vijay Tikhe, Chris R. Gissendanner, Claudia Husseneder
Genome Announcements.2018;[Epub] CrossRef - Metavirome Sequencing of the Termite Gut Reveals the Presence of an Unexplored Bacteriophage Community
Chinmay V. Tikhe, Claudia Husseneder
Frontiers in Microbiology.2018;[Epub] CrossRef - The Discovery, Mechanisms, and Evolutionary Impact of Anti-CRISPRs
Adair L. Borges, Alan R. Davidson, Joseph Bondy-Denomy
Annual Review of Virology.2017; 4(1): 37. CrossRef - Genome-Wide Abolishment of Mobile Genetic Elements Using Genome Shuffling and CRISPR/Cas-Assisted MAGE Allows the Efficient Stabilization of a Bacterial Chassis
Kinga Umenhoffer, Gábor Draskovits, Ákos Nyerges, Ildikó Karcagi, Balázs Bogos, Edit Tímár, Bálint Csörgő, Róbert Herczeg, István Nagy, Tamás Fehér, Csaba Pál, György Pósfai
ACS Synthetic Biology.2017; 6(8): 1471. CrossRef - Embracing the enemy: the diversification of microbial gene repertoires by phage-mediated horizontal gene transfer
Marie Touchon, Jorge A Moura de Sousa, Eduardo PC Rocha
Current Opinion in Microbiology.2017; 38: 66. CrossRef - Assessing Species Diversity Using Metavirome Data: Methods and Challenges
Damayanthi Herath, Duleepa Jayasundara, David Ackland, Isaam Saeed, Sen-Lin Tang, Saman Halgamuge
Computational and Structural Biotechnology Journal.2017; 15: 447. CrossRef - Microbial processes driving coral reef organic carbon flow
Cynthia B. Silveira, Giselle S. Cavalcanti, Juline M. Walter, Arthur W. Silva-Lima, Elizabeth A. Dinsdale, David G. Bourne, Cristiane C. Thompson, Fabiano L. Thompson
FEMS Microbiology Reviews.2017; 41(4): 575. CrossRef - Prophages of the genus Bifidobacterium as modulating agents of the infant gut microbiota
Gabriele Andrea Lugli, Christian Milani, Francesca Turroni, Denise Tremblay, Chiara Ferrario, Leonardo Mancabelli, Sabrina Duranti, Doyle V. Ward, Maria Cristina Ossiprandi, Sylvain Moineau, Douwe van Sinderen, Marco Ventura
Environmental Microbiology.2016; 18(7): 2196. CrossRef - Global repositioning of transcription start sites in a plant-fermenting bacterium
Magali Boutard, Laurence Ettwiller, Tristan Cerisy, Adriana Alberti, Karine Labadie, Marcel Salanoubat, Ira Schildkraut, Andrew C. Tolonen
Nature Communications.2016;[Epub] CrossRef - Uncovering Earth’s virome
David Paez-Espino, Emiley A. Eloe-Fadrosh, Georgios A. Pavlopoulos, Alex D. Thomas, Marcel Huntemann, Natalia Mikhailova, Edward Rubin, Natalia N. Ivanova, Nikos C. Kyrpides
Nature.2016; 536(7617): 425. CrossRef - Identification and Initial Characterization of Prophages in Vibrio campbellii
Nicola Lorenz, Matthias Reiger, Mauricio Toro-Nahuelpan, Andreas Brachmann, Lisa Poettinger, Laure Plener, Jürgen Lassak, Kirsten Jung, Baochuan Lin
PLOS ONE.2016; 11(5): e0156010. CrossRef - Bacterial viruses enable their host to acquire antibiotic resistance genes from neighbouring cells
Jakob Haaber, Jørgen J. Leisner, Marianne T. Cohn, Arancha Catalan-Moreno, Jesper B. Nielsen, Henrik Westh, José R. Penadés, Hanne Ingmer
Nature Communications.2016;[Epub] CrossRef - Toxins go viral: phage‐encoded lysis releases group B colicins
Katrina van Raay, Benjamin Kerr
Environmental Microbiology.2016; 18(5): 1308. CrossRef - Temperate phages promote colicin‐dependent fitness of Salmonella enterica serovar Typhimurium
Lubov P. Nedialkova, Maja Sidstedt, Martin B. Koeppel, Stefanie Spriewald, Diana Ring, Roman G. Gerlach, Lionello Bossi, Bärbel Stecher
Environmental Microbiology.2016; 18(5): 1591. CrossRef - The Significance of Mutualistic Phages for Bacterial Ecology and Evolution
Nancy Obeng, Akbar Adjie Pratama, Jan Dirk van Elsas
Trends in Microbiology.2016; 24(6): 440. CrossRef - Experimental Evolution as an Underutilized Tool for Studying Beneficial Animal–Microbe Interactions
Kim L. Hoang, Levi T. Morran, Nicole M. Gerardo
Frontiers in Microbiology.2016;[Epub] CrossRef - Carriage of λ Latent Virus Is Costly for Its Bacterial Host due to Frequent Reactivation in Monoxenic Mouse Intestine
Marianne De Paepe, Laurent Tournier, Elisabeth Moncaut, Olivier Son, Philippe Langella, Marie-Agnès Petit, Diarmaid Hughes
PLOS Genetics.2016; 12(2): e1005861. CrossRef - Piggyback-the-Winner in host-associated microbial communities
Cynthia B Silveira, Forest L Rohwer
npj Biofilms and Microbiomes.2016;[Epub] CrossRef - The role of temperate bacteriophages in bacterial infection
Emily V. Davies, Craig Winstanley, Joanne L. Fothergill, Chloe E. James, Andrew Millard
FEMS Microbiology Letters.2016; 363(5): fnw015. CrossRef - Phages in the global fruit and vegetable industry
M. Żaczek, B. Weber-Dąbrowska, A. Górski
Journal of Applied Microbiology.2015; 118(3): 537. CrossRef - Absence of lysogeny in wild populations of Erwinia amylovora and Pantoea agglomerans
Dwayne R. Roach, David R. Sjaarda, Calvin P. Sjaarda, Carlos Juarez Ayala, Brittany Howcroft, Alan J. Castle, Antonet M. Svircev
Microbial Biotechnology.2015; 8(3): 510. CrossRef - Helicobacter pullorum Isolated from Fresh Chicken Meat: Antibiotic Resistance and Genomic Traits of an Emerging Foodborne Pathogen
Vítor Borges, Andrea Santos, Cristina Belo Correia, Margarida Saraiva, Armelle Ménard, Luís Vieira, Daniel A. Sampaio, Miguel Pinheiro, João Paulo Gomes, Mónica Oleastro, C. M. Dozois
Applied and Environmental Microbiology.2015; 81(23): 8155. CrossRef - A standardized protocol for the UV induction of Sulfolobus spindle-shaped virus 1
Salvatore Fusco, Martina Aulitto, Simonetta Bartolucci, Patrizia Contursi
Extremophiles.2015; 19(2): 539. CrossRef - Live cell imaging of SOS and prophage dynamics in isogenic bacterial populations
Stefan Helfrich, Eugen Pfeifer, Christina Krämer, Christian Carsten Sachs, Wolfgang Wiechert, Dietrich Kohlheyer, Katharina Nöh, Julia Frunzke
Molecular Microbiology.2015; 98(4): 636. CrossRef - When Competing Viruses Unify: Evolution, Conservation, and Plasticity of Genetic Identities
Luis P. Villarreal, Guenther Witzany
Journal of Molecular Evolution.2015; 80(5-6): 305. CrossRef - Impact of Spontaneous Prophage Induction on the Fitness of Bacterial Populations and Host-Microbe Interactions
Arun M. Nanda, Kai Thormann, Julia Frunzke, W. Margolin
Journal of Bacteriology.2015; 197(3): 410. CrossRef - Genome-Based Identification of Active Prophage Regions by Next Generation Sequencing in Bacillus licheniformis DSM13
Robert Hertel, David Pintor Rodríguez, Jacqueline Hollensteiner, Sascha Dietrich, Andreas Leimbach, Michael Hoppert, Heiko Liesegang, Sonja Volland, Raymond Schuch
PLOS ONE.2015; 10(3): e0120759. CrossRef - Molecular microbiology in antibacterial research
You-Hee Cho
Journal of Microbiology.2014; 52(3): 185. CrossRef - The chromosomal accommodation and domestication of mobile genetic elements
Marie Touchon, Louis-Marie Bobay, Eduardo PC Rocha
Current Opinion in Microbiology.2014; 22: 22. CrossRef
- [Minireview] Antibiofilm agents: A new perspective for antimicrobial strategy
-
Xi-Hui Li , Joon-Hee Lee
-
J. Microbiol. 2017;55(10):753-766. Published online September 28, 2017
-
DOI: https://doi.org/10.1007/s12275-017-7274-x
-
-
47
View
-
0
Download
-
118
Crossref
-
Abstract
-
Biofilms are complex microbial architectures that attach to
surfaces and encase microorganisms in a matrix composed
of self-produced hydrated extracellular polymeric substances
(EPSs). In biofilms, microorganisms become much more
resistant to antimicrobial treatments, harsh environmental
conditions, and host immunity. Biofilm formation by microbial
pathogens greatly enhances survival in hosts and causes
chronic infections that result in persistent inflammation and
tissue damages. Currently, it is believed over 80% of chronic
infectious diseases are mediated by biofilms, and it is known
that conventional antibiotic medications are inadequate at
eradicating these biofilm-mediated infections. This situation
demands new strategies for biofilm-associated infections,
and currently, researchers focus on the development of antibiofilm
agents that are specific to biofilms, but are nontoxic,
because it is believed that this prevents the development of
drug resistance. Here, we review the most promising antibiofilm
agents undergoing intensive research and development.
-
Citations
Citations to this article as recorded by

- Quinic acid enhances kanamycin efficacy against methicillin-resistant Staphylococcus aureus biofilms
Borel Ndezo Bisso, Humera Jahan, Jean Paul Dzoyem, M. Iqbal Choudhary
Microbial Pathogenesis.2025; 198: 107145. CrossRef - Customized Lanthanide Nanobiohybrids for Noninvasive Precise Phototheranostics of Pulmonary Biofilm Infection
Zhuo Li, Shan Lu, Wenzhen Liu, Zhuo Chen, Yunmei Huang, Xingjun Li, Jiacheng Gong, Xueyuan Chen
ACS Nano.2024; 18(18): 11837. CrossRef - Investigation of Pseudomonas aeruginosa bacteria in a number of Baghdad schools and extent of their resistance to disinfectants and sterilizers
Shaimaa Hadi Al-Dulaimi, Miyada Kh Hassan
Arab Gulf Journal of Scientific Research.2024; 42(4): 1805. CrossRef - Role of small molecules and nanoparticles in effective inhibition of microbial biofilms: A ray of hope in combating microbial resistance
Rohith Gattu, Sanjay S. Ramesh, Suhas Ramesh
Microbial Pathogenesis.2024; 188: 106543. CrossRef - Synthesis, Structural Characterization, and Biological Activities of 1,3,4‐ Thiadiazole Derivatives Containing Sulfonylpiperazine Structures
You‐hua Liu, Fa‐li Wang, Xiao‐li Ren, Chang‐kun Li, Lin‐hong Jin, Xia Zhou
Chemistry & Biodiversity.2024;[Epub] CrossRef - Electrochemical biosensors on microfluidic chips as promising tools to study microbial biofilms: a review
Adei Abouhagger, Raimonda Celiešiūtė-Germanienė, Neringa Bakute, Arunas Stirke, Wanessa C. M. A. Melo
Frontiers in Cellular and Infection Microbiology.2024;[Epub] CrossRef - Revolution of artificial intelligence in antimicrobial, anti-biofilm, and anti-inflammatory techniques: Smart photo-sonodynamic appliance in the internet of dental things (IoDT)
Maryam Pourhajibagher, Rashin Bahrami, Abbas Bahador
Medical Hypotheses.2024; 184: 111270. CrossRef - Phage-Derived Endolysins Against Resistant Staphylococcus spp.: A Review of Features, Antibacterial Activities, and Recent Applications
Mina Golban, Javad Charostad, Hossein Kazemian, Hamid Heidari
Infectious Diseases and Therapy.2024;[Epub] CrossRef - Medical Scope of Biofilm and Quorum Sensing during Biofilm Formation: Systematic Review
Mulat Erkihun, Zelalem Asmare, Kirubel Endalamew, Birhanu Getie, Teklehaimanot Kiros, Ayenew Berhan
Bacteria.2024; 3(3): 118. CrossRef - A Gas Therapy Strategy for Intestinal Flora Regulation and Colitis Treatment by Nanogel‐Based Multistage NO Delivery Microcapsules
Ya‐Jun Fu, Xing Zhao, Li‐Ya Wang, Kai Li, Niu Jiang, Shu‐Ting Zhang, Rao‐Kaijuan Wang, Yi‐Fan Zhao, Wei Yang
Advanced Materials.2024;[Epub] CrossRef - Controlling Staphylococcus aureus biofilm on food contact surfaces: the efficacy of Oliveria decumbens essential oil and its implications on biofilm-related genes
Mahshad Javid Moghadam, Siavash Maktabi, Mehdi Zarei, Pezhman Mahmoodi
Journal of Applied Microbiology.2024;[Epub] CrossRef - Isolation of 2,2′-azoxybisbenzyl alcohol from Agaricus subrutilescens and its inhibitory activity against bacterial biofilm formation
Jewel C De Padua, Tomoya Tanaka, Kotomi Ueno, Thomas Edison E dela Cruz, Atsushi Ishihara
Bioscience, Biotechnology, and Biochemistry.2024; 88(9): 983. CrossRef - Control of Staphylococcus epidermidis biofilm by surfactins of an endophytic bacterium Bacillus sp. 15 F
Marwa Jardak, Raphaël Lami, Oumaima Saadaoui, Hajer Jlidi, Didier Stien, Sami Aifa, Sami Mnif
Enzyme and Microbial Technology.2024; 180: 110477. CrossRef - A concise review of the effect of efflux pump on biofilm intensity in bacteria with a special view to Mycobacterium
Marjan Darbani Fouladi, Saeid Besharati, Parissa Farnia, Adnan Khosravi
Journal of Preventive, Diagnostic and Treatment Strategies in Medicine.2024; 3(1): 1. CrossRef - Translating bacteriophage-derived depolymerases into antibacterial therapeutics: Challenges and prospects
Honglan Wang, Yannan Liu, Changqing Bai, Sharon Shui Yee Leung
Acta Pharmaceutica Sinica B.2024; 14(1): 155. CrossRef - Modulation of proteins by rare earth elements as a biotechnological tool
Azam Bakhti, Zahra Shokouhi, Fatemeh Mohammadipanah
International Journal of Biological Macromolecules.2024; 258: 129072. CrossRef - Antibiofilm Strategies in Neonatal and Pediatric Infections
Chrysoula Kosmeri, Vasileios Giapros, Anastasios Serbis, Foteini Balomenou, Maria Baltogianni
Antibiotics.2024; 13(6): 509. CrossRef - In vitro anti-bactrical activity and its preliminary mechanism of action of the non-medicinal parts of Sanguisorba officinalis L. against Helicobacter pylori infection
Pengting Chen, Meiyun Chen, Chang Peng, Jiahui Yan, Xue Shen, Weijia Zhang, Yuemei Yuan, Guoxing Gan, Xiaojun Luo, Weixing Zhu, Meicun Yao
Journal of Ethnopharmacology.2024; 318: 116981. CrossRef - Delving into the Mechanisms of Sponge-Associated Enterobacter against Staphylococcal Biofilms
Anna Luiza Bauer Canellas, Bruno Francesco Rodrigues de Oliveira, Suzanne de Oliveira Nunes, Camila Adão Malafaia, Ana Claudia F. Amaral, Daniel Luiz Reis Simas, Ivana Correa Ramos Leal, Marinella Silva Laport
Molecules.2023; 28(12): 4843. CrossRef - A new approach to overcoming antibiotic-resistant bacteria: Traditional Chinese medicine therapy based on the gut microbiota
Peng Xue, Rui Sang, Nan Li, Siyuan Du, Xiuwen Kong, Mingliang Tai, Zhihao Jiang, Ying Chen
Frontiers in Cellular and Infection Microbiology.2023;[Epub] CrossRef - Molybdenum oxide nanotube caps decorated with ultrafine Ag nanoparticles: Synthesis and antimicrobial activity
Shabnam Yavari, Kayode Olaifa, Darya Shafiee, Reza Rasuli, Mehdi Shafiee
International Journal of Pharmaceutics.2023; 647: 123528. CrossRef - Bacterial biofilm inhibitors: An overview
Vipin Chandra Kalia, Sanjay K.S. Patel, Jung-Kul Lee
Ecotoxicology and Environmental Safety.2023; 264: 115389. CrossRef -
Better together–
Salmonella
biofilm-associated antibiotic resistance
Adrianna Aleksandrowicz, Ewa Carolak, Agata Dutkiewicz, Aleksandra Błachut, Wiktoria Waszczuk, Krzysztof Grzymajlo
Gut Microbes.2023;[Epub] CrossRef - Natural Medicine a Promising Candidate in Combating Microbial Biofilm
Athar Shamim, Asgar Ali, Zeenat Iqbal, Mohd Aamir Mirza, Mohd Aqil, S. M. Kawish, Ayesha Siddiqui, Vijay Kumar, Punnoth Poonkuzhi Naseef, Abdulkhaliq Ali F. Alshadidi, Mohamed Saheer Kuruniyan
Antibiotics.2023; 12(2): 299. CrossRef - Antibiotic Resistance and Biofilm Infections in the NICUs and Methods to Combat It
Maria Baltogianni, Vasileios Giapros, Chrysoula Kosmeri
Antibiotics.2023; 12(2): 352. CrossRef -
In vitro
activity of sanitizers against mono- and polymicrobial biofilms of
C. parapsilosis
and
S. aureus
Vitor de Paula Castro, Danilo Yamamoto Thomaz, Kayro de Lima Vieira, Leonardo Guedes Lopes, Flavia Rossi, Gilda M. B. Del Negro, Gil Benard, Regina Helena Pires, Andreas H. Groll
Antimicrobial Agents and Chemotherapy.2023;[Epub] CrossRef - Inhibition of bacterial biofilms by the snake venom proteome
Neyaz A. Khan, Fernanda G. Amorim, John P. Dunbar, Dayle Leonard, Damien Redureau, Loïc Quinton, Michel M. Dugon, Aoife Boyd
Biotechnology Reports.2023; 39: e00810. CrossRef - Compounds That Have an Anti-Biofilm Effect against Common Bacteria at Very Low Concentrations and Their Antibiotic Combination Effect
Hyeon-Ji Hwang, Dan-dan Li, Jieun Lee, Min Kyung Kang, Hyung Ryong Moon, Joon-Hee Lee
Antibiotics.2023; 12(5): 853. CrossRef - Biofilm-Producing Ability of Staphylococcus aureus Obtained from Surfaces and Milk of Mastitic Cows
Mária Vargová, František Zigo, Jana Výrostková, Zuzana Farkašová, Ibrahim F. Rehan
Veterinary Sciences.2023; 10(6): 386. CrossRef - Utilization of Existing Human Kinase Inhibitors as Scaffolds in the Development of New Antimicrobials
Monika I. Konaklieva, Balbina J. Plotkin
Antibiotics.2023; 12(9): 1418. CrossRef - Synergistic action of phages and lytic proteins with antibiotics: a combination strategy to target bacteria and biofilms
Han Lu, Zong Li, Amro Elbaz, Shou-Qing Ni
BMC Microbiology.2023;[Epub] CrossRef - Consolidated knowledge-guided computational pipeline for therapeutic intervention against bacterial biofilms - a review
Reetika Debroy, Sudha Ramaiah
Biofouling.2023; 39(9-10): 928. CrossRef - Molecular identification of a novel antimicrobial peptide in giant Triton snail Charonia tritonis: mRNA profiles for tissues and its potential antibacterial activity
Xitong Cen, Bing Liu, Gege Zhang, Huiru Liu, Gaoyou Yao, Maoxian He, Wenguang Liu
Fish & Shellfish Immunology.2023; 136: 108734. CrossRef - Effect of a Depolymerase Encoded by Phage168 on a Carbapenem-Resistant Klebsiella pneumoniae and Its Biofilm
Xu Sun, Bingchun Pu, Jinhong Qin, Jun Xiang
Pathogens.2023; 12(12): 1396. CrossRef - In Vitro Antibiofilm Activity of Resveratrol against Aeromonas hydrophila
Ting Qin, Kai Chen, Bingwen Xi, Liangkun Pan, Jun Xie, Liushen Lu, Kai Liu
Antibiotics.2023; 12(4): 686. CrossRef - Sodium Octanoate–Functionalized Chitosan Coating Reduces Dry Rot Caused by Fusarium Sambucinum (AUC-TZ-1) in Potato Minitubers in Storage
Rafael Jiménez-Mejía, Mariana Corona-Márquez, Jessica G. Zepeda-García, Cristina Rodríguez-Cárdenas, Gustavo Santoyo, Luzmaría R. Morales-Cedeño, Ricardo I. Medina-Estrada, Mónica G. Sánchez-Ceja, Pedro D. Loeza-Lara
Potato Research.2023; 66(4): 1059. CrossRef -
Combined antimicrobial effect of phage-derived endolysin and depolymerase against biofilm-forming
Salmonella
Typhimurium
Junhwan Kim, Jun Wang, Juhee Ahn
Biofouling.2023; 39(7): 763. CrossRef - Influences of flavonoids from Sedum aizoon L. on biofilm formation of Pseudomonas fragi
Haoxia Wang, Qingqing Ge, Xingfeng Shao, Yingying Wei, Xin Zhang, Hongfei Wang, Feng Xu
Applied Microbiology and Biotechnology.2023; 107(11): 3687. CrossRef - Antibacterial and antibiofilm potential of Lacticaseibacillus rhamnosus YT and its cell-surface extract
Chengran Guan, Wenjuan Zhang, Jianbo Su, Feng Li, Dawei Chen, Xia Chen, Yujun Huang, Ruixia Gu, Chenchen Zhang
BMC Microbiology.2023;[Epub] CrossRef - From Antibacterial to Antibiofilm Targeting: An Emerging Paradigm Shift in the Development of Quaternary Ammonium Compounds (QACs)
Evgeniya A. Saverina, Nikita A. Frolov, Olga A. Kamanina, Vyacheslav A. Arlyapov, Anatoly N. Vereshchagin, Valentine P. Ananikov
ACS Infectious Diseases.2023; 9(3): 394. CrossRef - Acinetobacter baumannii biofilm and its potential therapeutic targets
Eman Abdelbaset Mohamed, Marwa M. Raafat, Reham Samir Mohamed, Amal Emad Eldin Ali
Future Journal of Pharmaceutical Sciences.2023;[Epub] CrossRef - Control of pathogenic bacteria using marine actinobacterial extract with antiquorum sensing and antibiofilm activity
Marco Wijaya, Dea Delicia, Diana Elizabeth Waturangi
BMC Research Notes.2023;[Epub] CrossRef - Synthetic non-toxic anti-biofilm agents as a strategy in combating bacterial resistance
Rasha Mohamed Hassan, Mohamed Samir Abd El-Maksoud, Iman Ahmed Youssef Ghannam, Aida Abdel- Sattar El-Azzouny, Mohamed Nabil Aboul-Enein
European Journal of Medicinal Chemistry.2023; 262: 115867. CrossRef - Isolation and characterization of SGF3, a novel Microviridae phage infecting Shigella flexneri
Han Lu, Wenbin Xiong, Zong Li, Peihan Yan, Ruyin Liu, Xinchun Liu
Molecular Genetics and Genomics.2022; 297(4): 935. CrossRef - Phytocompound Mediated Blockage of Quorum Sensing Cascade in ESKAPE Pathogens
Sreejita Ghosh, Dibyajit Lahiri, Moupriya Nag, Ankita Dey, Soumya Pandit, Tanmay Sarkar, Siddhartha Pati, Zulhisyam Abdul Kari, Ahmad Razali Ishak, Hisham Atan Edinur, Rina Rani Ray
Antibiotics.2022; 11(1): 61. CrossRef - Enhanced sunlight-absorption of Fe2O3 covered by PANI for the photodegradation of organic pollutants and antimicrobial inactivation
Faisal Mukhtar, Tauseef Munawar, Muhammad Shahid Nadeem, Shoukat Alim Khan, Muammer Koc, Sana Batool, Murtaza Hasan, Faisal Iqbal
Advanced Powder Technology.2022; 33(8): 103708. CrossRef - Borrelia burgdorferi Co-Localizing with Amyloid Markers in Alzheimer’s Disease Brain Tissues
Alireza G. Senejani, Jasmin Maghsoudlou, Dina El-Zohiry, Gauri Gaur, Keith Wawrzeniak, Cristina Caravaglia, Vishwa A. Khatri, Alan MacDonald, Eva Sapi
Journal of Alzheimer's Disease.2022; 85(2): 889. CrossRef - Advanced Strategies of Enzyme Activity Regulation for Biomedical Applications
Zihan Chen, Yu Zhao, Yang Liu
ChemBioChem.2022;[Epub] CrossRef - Mode of action of elasnin as biofilm formation eradicator of methicillin-resistant Staphylococcus aureus
Lexin Long, Jordy Evan Sulaiman, Yao Xiao, Aifang Cheng, Ruojun Wang, Jessie James Malit, Wai Chuen Wong, Wenchao Liu, Yong-Xin Li, Feng Chen, Henry Lam, Pei-Yuan Qian
Frontiers in Microbiology.2022;[Epub] CrossRef - In silico disrupting quorum sensing of porphyromonas gingivalis via essential oils and coumarin derivatives
Al-Madhagi Haitham Ahmed, Tahan Zaher Samman
Annals of Proteomics and Bioinformatics.2022; 6(1): 001. CrossRef - Nitric oxide-releasing L-Tryptophan and L-Phenylalanine based Poly(ester urea)s electrospun composite mats as antibacterial and antibiofilm dressing for wound healing
Mengna Li, Weiwang Qiu, Qian Wang, Na Li, Xueli Wang, Jianyong Yu, Xiaoran Li, Faxue Li, Dequn Wu
Composites Part B: Engineering.2022; 229: 109484. CrossRef - Nitric Oxide-Releasing Tryptophan-Based Poly(ester urea)s Electrospun Composite Nanofiber Mats with Antibacterial and Antibiofilm Activities for Infected Wound Healing
Mengna Li, Weiwang Qiu, Qian Wang, Na Li, Lu Liu, Xueli Wang, Jianyong Yu, Xiaoran Li, Faxue Li, Dequn Wu
ACS Applied Materials & Interfaces.2022; 14(14): 15911. CrossRef - Recent Strategies to Combat Biofilms Using Antimicrobial Agents and Therapeutic Approaches
Looniva Shrestha, Hai-Ming Fan, Hui-Ren Tao, Jian-Dong Huang
Pathogens.2022; 11(3): 292. CrossRef - Activity of Antibiotics and Potential Antibiofilm Agents against Biofilm-Producing Mycobacterium avium-intracellulare Complex Causing Chronic Pulmonary Infections
Elena Portell-Buj, Cecibel González-Criollo, Alexandre López-Gavín, Mariana Fernández-Pittol, Maria Antònia Busquets, Joan Estelrich, Montserrat Garrigó, Marc Rubio, Griselda Tudó, Julian Gonzalez-Martin
Antibiotics.2022; 11(5): 589. CrossRef - Supermagnetic halloysite nanotubes surface-tuned with aminosilane for protease immobilization and applied for eradication of bacterial biofilm
Min Kim, Min Kyoung Shin, Jung-Suk Sung, Avinash A. Kadam
Applied Surface Science.2022; 593: 153469. CrossRef - Biofilms as a microbial hazard in the food industry: A scoping review
Manjeet Sharan, Deepthi Vijay, Pankaj Dhaka, Jasbir Singh Bedi, Jatinder Paul Singh Gill
Journal of Applied Microbiology.2022; 133(4): 2210. CrossRef - Enhanced inactivation of Salmonella enterica Enteritidis biofilms on the stainless steel surface by proteinase K in the combination with chlorine
Min-Jeong Kim, Joo-Sung Kim
Food Control.2022; 132: 108519. CrossRef - Phylogenetic identification of fungi isolated from strawberry and papaya fruits and their susceptibility to fatty acids
Leticia Robles-Yerena, Johan Rodríguez-Mendoza, Gustavo Santoyo, Xavier Iván Ochoa-Alvarado, Ricardo Ivan Medina-Estrada, Rafael Jiménez-Mejía, Pedro Damián Loeza-Lara
Canadian Journal of Plant Pathology.2022; 44(6): 828. CrossRef - New insights into the inhibitory roles and mechanisms of D-amino acids in bacterial biofilms in medicine, industry, and agriculture
Saeed Niazi Vahdati, Hossein Behboudi, Sepideh Aliniaye Navasatli, Sara Tavakoli, Maliheh Safavi
Microbiological Research.2022; 263: 127107. CrossRef - Synergistic combination of malic acid with sodium hypochlorite impairs biofilm of Cronobacter sakazakii
Rajni Chauhan, Savita Kumari, Gunjan Goel, Wamik Azmi
LWT.2022; 155: 112902. CrossRef - Marine natural products and their synthetic analogs as promising antibiofilm agents for antibiotics discovery and development
Yueting Deng, Yang Liu, Juan Li, Xiao Wang, Shan He, Xiaojun Yan, Yutong Shi, Weiyan Zhang, Lijian Ding
European Journal of Medicinal Chemistry.2022; 239: 114513. CrossRef - Antimicrobial activities of 1-phenyl-3-methyl-4-trichloroacetyl-pyrazolone: Experimental, DFT studies, and molecular docking investigation
Ededet A. Eno, Justina I. Mbonu, Hitler Louis, Faith S. Patrick-Inezi, Terkumbur E. Gber, Tomsmith O. Unimuke, Emmanuel E.D. Okon, Innocent Benjamin, Offiong E. Offiong
Journal of the Indian Chemical Society.2022; 99(7): 100524. CrossRef - Antibiofilm Effects of Bacteriocin BMP32r on Listeria monocytogenes
Zhu Qiao, Leshan Zhang, Xin Wang, Bianfang Liu, Yuanyuan Shan, Yanglei Yi, Yuan Zhou, Xin Lü
Probiotics and Antimicrobial Proteins.2022; 14(6): 1067. CrossRef - NO donors and NO delivery methods for controlling biofilms in chronic lung infections
Yu-Ming Cai, Ying-Dan Zhang, Liang Yang
Applied Microbiology and Biotechnology.2021; 105(10): 3931. CrossRef - Enzyme Therapy: Current Challenges and Future Perspectives
Miguel de la Fuente, Laura Lombardero, Alfonso Gómez-González, Cristina Solari, Iñigo Angulo-Barturen, Arantxa Acera, Elena Vecino, Egoitz Astigarraga, Gabriel Barreda-Gómez
International Journal of Molecular Sciences.2021; 22(17): 9181. CrossRef - Antibiofilm Activity of Gallium(III) Complexed Anionic Polymers in Combination with Antibiotics
Jielin Ma, Shuai Hou, Mary B. Chan‐Park, Hongwei Duan
Macromolecular Rapid Communications.2021;[Epub] CrossRef - Pseudomonas aeruginosa Biofilm Formation and Its Control
Aishwarya Vetrivel, Monica Ramasamy, Preethi Vetrivel, Santhi Natchimuthu, Shobana Arunachalam, Gon-Sup Kim, Rajeswari Murugesan
Biologics.2021; 1(3): 312. CrossRef - Dynamic Constitutional Frameworks as Antibacterial and Antibiofilm Agents
Andrei Diaconu, Tom Coenye, Mihail Barboiu, Stéphane P. Vincent
Angewandte Chemie International Edition.2021; 60(41): 22505. CrossRef - Identification of Bioactive Compounds and Evaluation of the Antimicrobial and Anti-biofilm Effect of Psammocinia sp. and Hyattella sp. Sponges from the Persian Gulf
Homa Hamayeli, Mehdi Hassanshahian, Majid Askari Hesni
Thalassas: An International Journal of Marine Sciences.2021; 37(1): 357. CrossRef - Antibacterial peptides from seafood: A promising weapon to combat bacterial hazards in food
Jinrong Tong, Zhaohuan Zhang, Qian Wu, Zhenhua Huang, Pradeep K. Malakar, Liangbiao Chen, Haiquan Liu, Yingjie Pan, Yong Zhao
Food Control.2021; 125: 108004. CrossRef - Discovery of Polyvalent Myovirus (vB_STM-2) Phage as a Natural Antimicrobial System to Lysis and Biofilm Removal of Salmonella Typhimurium Isolates from Various Food Sources
Iman M. A. Abdelhadi, Ahmed R. Sofy, Ahmed A. Hmed, Ehab E. Refaey, Hany E. Soweha, Mohamed A. Abbas
Sustainability.2021; 13(21): 11602. CrossRef - Phytochemical Composition, Antibacterial, and Antibiofilm Activity of Malva sylvestris Against Human Pathogenic Bacteria
Mahmoud Fathi, Maryam Ghane, Leila Pishkar
Jundishapur Journal of Natural Pharmaceutical Products.2021;[Epub] CrossRef - Bacteriophage-Derived Depolymerases against Bacterial Biofilm
Gracja Topka-Bielecka, Aleksandra Dydecka, Agnieszka Necel, Sylwia Bloch, Bożena Nejman-Faleńczyk, Grzegorz Węgrzyn, Alicja Węgrzyn
Antibiotics.2021; 10(2): 175. CrossRef - Inhibitory Effects of Cinnamaldehyde Derivatives on Biofilm Formation and Virulence Factors in Vibrio Species
Olajide Sunday Faleye, Ezhaveni Sathiyamoorthi, Jin-Hyung Lee, Jintae Lee
Pharmaceutics.2021; 13(12): 2176. CrossRef - In Vitro Effect of Copper (I) Complex [Cu(NN1)2](ClO4) on Vibrio harveyi BB170 Biofilm Formation
Sarita Soto-Aguilera, Brenda Modak, Maialen Aldabaldetrecu, Carla P. Lozano, Juan Guerrero, Claudia Lefimil, Mick Parra
Microorganisms.2021; 9(11): 2273. CrossRef - Dynamic Constitutional Frameworks as Antibacterial and Antibiofilm Agents
Andrei Diaconu, Tom Coenye, Mihail Barboiu, Stéphane P. Vincent
Angewandte Chemie.2021; 133(41): 22679. CrossRef - Antibacterial, anti-biofilm and anti-quorum sensing activities of Artemisia dracunculus essential oil (EO): a study against Salmonella enterica serovar Typhimurium and Staphylococcus aureus
Shima Mohammadi Pelarti, Leila Karimi Zarehshuran, Laleh Babaeekhou, Maryam Ghane
Archives of Microbiology.2021; 203(4): 1529. CrossRef - Bacterial Biofilm Destruction: A Focused Review On The Recent Use of Phage-Based Strategies With Other Antibiofilm Agents
Stephen Amankwah, Kedir Abdusemed, Tesfaye Kassa
Nanotechnology, Science and Applications.2021; Volume 14: 161. CrossRef - The Chemistry of Antibiofilm Phytocompounds
Dibyajit Lahiri, Moupriya Nag, Sayantani Garai, Rina Rani Ray
Mini-Reviews in Medicinal Chemistry.2021; 21(9): 1034. CrossRef - Synergistic Activity of Equol and Meropenem against Carbapenem-Resistant Escherichia coli
Hye-Rim Kim, Yong-Bin Eom
Antibiotics.2021; 10(2): 161. CrossRef - Microbial biofilm: formation, architecture, antibiotic resistance, and control strategies
Muzamil Ahmad Rather, Kuldeep Gupta, Manabendra Mandal
Brazilian Journal of Microbiology.2021; 52(4): 1701. CrossRef - Synthesis and antimicrobial evaluation of a pyrazoline-pyridine silver(I) complex: DNA-interaction and anti-biofilm activity
Dimitris Matiadis, Maria Karagiaouri, Barbara Mavroidi, Katarzyna E. Nowak, Georgios Katsipis, Maria Pelecanou, Anastasia Pantazaki, Marina Sagnou
BioMetals.2021; 34(1): 67. CrossRef - Multi-purpose Disinfecting Solutions only Partially Inhibit the Development of Ocular Microbes Biofilms in Contact Lens Storage Cases
Fabiano B.M. de Araújo, Vinicius C. Morais, Bianca T.M. de Oliveira, Kaíque Y.G. de Lima, Victor T. Gomes, Ian P.G. do Amaral, Ulrich Vasconcelos
Middle East African Journal of Ophthalmology.2021; 28(2): 116. CrossRef - Activity of Liquid and Volatile Fractions of Essential Oils against Biofilm Formed by Selected Reference Strains on Polystyrene and Hydroxyapatite Surfaces
Ruth Dudek-Wicher, Justyna Paleczny, Beata Kowalska-Krochmal, Patrycja Szymczyk-Ziółkowska, Natalia Pachura, Antoni Szumny, Malwina Brożyna
Pathogens.2021; 10(5): 515. CrossRef - Antibacterial and antibiofilm activities of diphyllin against fish pathogens
Suman Thamburaj, Elangomathavan Ramaraj, Sivasamy Sethupathy, Chakkaravarthi Kamalanathan, Atchudan Raji, Satish Kumar Rajasekharan
Microbial Pathogenesis.2020; 145: 104232. CrossRef - The Role of Bacterial Biofilm in Antibiotic Resistance and Food Contamination
Gedif Meseret Abebe
International Journal of Microbiology.2020; 2020: 1. CrossRef - The use of papain for the removal of biofilms formed by pathogenic Staphylococcus aureus and Campylobacter jejuni
Ye Ji Song, Hwan Hee Yu, Yeon Jin Kim, Na-Kyoung Lee, Hyun-Dong Paik
LWT.2020; 127: 109383. CrossRef - Biofilm inhibition and mode of action of epigallocatechin gallate against Vibrio mimicus
Rui Li, Jieyuan Lu, Hebo Duan, Jun Yang, Changbo Tang
Food Control.2020; 113: 107148. CrossRef - Structural approaches to pathway-specific antimicrobial agents
Michael E. Johnson, Leslie W.-M. Fung
Translational Research.2020; 220: 114. CrossRef - Study on the effects of different dimerization positions on biological activity of partial d-Amino acid substitution analogues of Anoplin
Chao Zhong, Sanhu Gou, Tianqi Liu, Yuewen Zhu, Ningyi Zhu, Hui Liu, Yun Zhang, Junqiu Xie, Xiaomin Guo, Jingman Ni
Microbial Pathogenesis.2020; 139: 103871. CrossRef - Thiazoles, Their Benzofused Systems, and Thiazolidinone Derivatives: Versatile and Promising Tools to Combat Antibiotic Resistance
Stella Cascioferro, Barbara Parrino, Daniela Carbone, Domenico Schillaci, Elisa Giovannetti, Girolamo Cirrincione, Patrizia Diana
Journal of Medicinal Chemistry.2020; 63(15): 7923. CrossRef -
Alterocin, an Antibiofilm Protein Secreted by
Pseudoalteromonas
sp. Strain 3J6
Albane Jouault, Angélique Gobet, Marjolaine Simon, Emilie Portier, Morgan Perennou, Erwan Corre, Fanny Gaillard, David Vallenet, Gurvan Michel, Yannick Fleury, Alexis Bazire, Alain Dufour, Andrew J. McBain
Applied and Environmental Microbiology.2020;[Epub] CrossRef -
Thermoregulation of
Pseudomonas aeruginosa
Biofilm Formation
Suran Kim, Xi-Hui Li, Hyeon-Ji Hwang, Joon-Hee Lee, Danilo Ercolini
Applied and Environmental Microbiology.2020;[Epub] CrossRef - Scientific evidence in antimicrobial photodynamic therapy: An alternative approach for reducing cariogenic bacteria
Ana Catarina Martins Reis, Wanessa Fernandes Matias Regis, Lidiany Karla Azevedo Rodrigues
Photodiagnosis and Photodynamic Therapy.2019; 26: 179. CrossRef - Triterpene Derivatives as Relevant Scaffold for New Antibiofilm Drugs
Gloria Narjara Santos da Silva, Muriel Primon-Barros, Alexandre José Macedo, Simone Cristina Baggio Gnoatto
Biomolecules.2019; 9(2): 58. CrossRef - Characterization and Genome Analysis of Staphylococcus aureus Podovirus CSA13 and Its Anti-Biofilm Capacity
Yoyeon Cha, Jihwan Chun, Bokyung Son, Sangryeol Ryu
Viruses.2019; 11(1): 54. CrossRef - Effective removal of staphylococcal biofilms on various food contact surfaces by Staphylococcus aureus phage endolysin LysCSA13
Yoyeon Cha, Bokyung Son, Sangryeol Ryu
Food Microbiology.2019; 84: 103245. CrossRef - Bacteria‐Targeted Supramolecular Photosensitizer Delivery Vehicles for Photodynamic Ablation Against Biofilms
Yifan Gao, Jing Wang, Dengfeng Hu, Yongyan Deng, Tingting Chen, Qiao Jin, Jian Ji
Macromolecular Rapid Communications.2019;[Epub] CrossRef - The Varied Role of Efflux Pumps of the MFS Family in the Interplay of Bacteria with Animal and Plant Cells
Martina Pasqua, Milena Grossi, Alessandro Zennaro, Giulia Fanelli, Gioacchino Micheli, Frederic Barras, Bianca Colonna, Gianni Prosseda
Microorganisms.2019; 7(9): 285. CrossRef - Developing natural products as potential anti-biofilm agents
Lan Lu, Wei Hu, Zeru Tian, Dandan Yuan, Guojuan Yi, Yangyang Zhou, Qiang Cheng, Jie Zhu, Mingxing Li
Chinese Medicine.2019;[Epub] CrossRef - A Synthetic Derivative of Antimicrobial Peptide Holothuroidin 2 from Mediterranean Sea Cucumber (Holothuria tubulosa) in the Control of Listeria monocytogenes
Maria Grazia Cusimano, Angelo Spinello, Giampaolo Barone, Domenico Schillaci, Stella Cascioferro, Alessandra Magistrato, Barbara Parrino, Vincenzo Arizza, Maria Vitale
Marine Drugs.2019; 17(3): 159. CrossRef - A Consideration of Antibacterial Agent Efficacies in the Treatment and Prevention of Formation of Staphylococcus aureus Biofilm
Zahra Sedarat, Andrew W. Taylor-Robinson
Journal of Microbiology and Infectious Diseases.2019; : 167. CrossRef - Biofilm Disruption Utilizing α/β Chimeric Polypeptide Molecular Brushes
Si Zhang, Xi-Mian Xiao, Fan Qi, Peng-Cheng Ma, Wei-Wei Zhang, Cheng-Zhi Dai, Dan-Feng Zhang, Run-Hui Liu
Chinese Journal of Polymer Science.2019; 37(11): 1105. CrossRef - Perspectives towards antibiotic resistance: from molecules to population
Joon-Hee Lee
Journal of Microbiology.2019; 57(3): 181. CrossRef - Nanoantibiotics: A Novel Rational Approach to Antibiotic Resistant Infections
Ayse Basak Engin, Atilla Engin
Current Drug Metabolism.2019; 20(9): 720. CrossRef - Targeting the Pseudomonas quinolone signal quorum sensing system for the discovery of novel anti-infective pathoblockers
Christian Schütz, Martin Empting
Beilstein Journal of Organic Chemistry.2018; 14: 2627. CrossRef - Interdependence between iron acquisition and biofilm formation in Pseudomonas aeruginosa
Donghoon Kang, Natalia V. Kirienko
Journal of Microbiology.2018; 56(7): 449. CrossRef - Intrapulmonary percussive ventilation improves lung function in cystic fibrosis patients chronically colonized with Pseudomonas aeruginosa: a pilot cross-over study
Jozef Dingemans, Hanneke Eyns, Julie Willekens, Pieter Monsieurs, Rob Van Houdt, Pierre Cornelis, Anne Malfroot, Aurélie Crabbé
European Journal of Clinical Microbiology & Infectious Diseases.2018; 37(6): 1143. CrossRef - Dysbiosis, small intestinal bacterial overgrowth and biofilms in autism and chronic illness
Anju Usman Singh
AIMS Molecular Science.2018; 5(2): 160. CrossRef - Antibiofilm effect of biofilm-dispersing agents on clinical isolates of Pseudomonas aeruginosa with various biofilm structures
Soo-Kyoung Kim, Xi-Hui Li, Hyeon-Ji Hwang, Joon-Hee Lee
Journal of Microbiology.2018; 56(12): 902. CrossRef - Control of Biofilm Formation in Healthcare: Recent Advances Exploiting Quorum-Sensing Interference Strategies and Multidrug Efflux Pump Inhibitors
Bindu Subhadra, Dong Ho Kim, Kyungho Woo, Surya Surendran, Chul Hee Choi
Materials.2018; 11(9): 1676. CrossRef - Printing of Patterned, Engineered E. coli Biofilms with a Low-Cost 3D Printer
Dominik T. Schmieden, Samantha J. Basalo Vázquez, Héctor Sangüesa, Marit van der Does, Timon Idema, Anne S. Meyer
ACS Synthetic Biology.2018; 7(5): 1328. CrossRef - Thinking Outside the Box—Novel Antibacterials To Tackle the Resistance Crisis
Markus Lakemeyer, Weining Zhao, Franziska A. Mandl, Peter Hammann, Stephan A. Sieber
Angewandte Chemie International Edition.2018; 57(44): 14440. CrossRef - Über bisherige Denkweisen hinaus – neue Wirkstoffe zur Überwindung der Antibiotika‐Krise
Markus Lakemeyer, Weining Zhao, Franziska A. Mandl, Peter Hammann, Stephan A. Sieber
Angewandte Chemie.2018; 130(44): 14642. CrossRef - Diabetic foot infection: A critical complication
Jennifer J Hurlow, Gavin J Humphreys, Frank L Bowling, Andrew J McBain
International Wound Journal.2018; 15(5): 814. CrossRef - Bacterial Biofilm Inhibition in the Development of Effective Anti-Virulence Strategy
Barbara Parrino, Patrizia Diana, Girolamo Cirrincione, Stella Cascioferro
The Open Medicinal Chemistry Journal.2018; 12(1): 84. CrossRef - Alkyl-guanidine Compounds as Potent Broad-Spectrum Antibacterial Agents: Chemical Library Extension and Biological Characterization
Carolina Pasero, Ilaria D’Agostino, Filomena De Luca, Claudio Zamperini, Davide Deodato, Giuseppina I. Truglio, Filomena Sannio, Rosita Del Prete, Teresa Ferraro, Daniela Visaggio, Arianna Mancini, Mario B. Guglielmi, Paolo Visca, Jean-Denis Docquier, Mau
Journal of Medicinal Chemistry.2018; 61(20): 9162. CrossRef - Potent effects of amino acid scanned antimicrobial peptide Feleucin-K3 analogs against both multidrug-resistant strains and biofilms of Pseudomonas aeruginosa
Junqiu Xie, Yao Li, Jing Li, Zhibin Yan, Dan Wang, Xiaomin Guo, Jianfeng Zhang, Bangzhi Zhang, Lingyun Mou, Wenle Yang, Xianxing Jiang
Amino Acids.2018; 50(10): 1471. CrossRef
- REVIEW] Transcriptional Regulatory Elements in Fungal Secondary Metabolism
-
Wenbing Yin , Nancy P. Keller
-
J. Microbiol. 2011;49(3):329-339. Published online June 30, 2011
-
DOI: https://doi.org/10.1007/s12275-011-1009-1
-
-
50
View
-
0
Download
-
112
Crossref
-
Abstract
-
Filamentous fungi produce a variety of secondary metabolites of diverse beneficial and detrimental activities to humankind. The genes required for a given secondary metabolite are typically arranged in a gene cluster. There is considerable evidence that secondary metabolite gene regulation is, in part, by transcriptional control through hierarchical levels of transcriptional regulatory elements involved in secondary metabolite cluster regulation. Identification of elements regulating secondary metabolism could potentially provide a means of increasing production of beneficial metabolites, decreasing production of detrimental metabolites, aid in the identification of ‘silent’ natural products and also contribute to a broader understanding of molecular mechanisms by which secondary metabolites are produced. This review summarizes regulation of secondary metabolism associated with transcriptional regulatory elements from a broad view as well as the tremendous advances in discovery of cryptic or novel secondary metabolites by genomic mining.
-
Citations
Citations to this article as recorded by

- Spray-Induced Gene Silencing (SIGS) as a Tool for the Management of Pine Pitch Canker Forest Disease
Irene Teresa Bocos-Asenjo, Huma Amin, Sandra Mosquera, Sergio Díez-Hermano, Mireille Ginésy, Julio Javier Diez, Jonatan Niño-Sánchez
Plant Disease.2025;[Epub] CrossRef - Developing filamentous fungal chassis for natural product production
Jie Fan, Peng-Lin Wei, Yuanyuan Li, Shengquan Zhang, Zedong Ren, Wei Li, Wen-Bing Yin
Bioresource Technology.2025; 415: 131703. CrossRef - Epigenetic Regulation of Fungal Secondary Metabolism
Yufei Zhang, Wenbin Yu, Yi Lu, Yichuan Wu, Zhiwei Ouyang, Yayi Tu, Bin He
Journal of Fungi.2024; 10(9): 648. CrossRef - Genome and metabolome analysis of Bacillus sp. Hex-HIT36: A newly screened functional microorganism for the degradation of 1-hexadecene in industrial wastewater
Lei Yang, Chuan Chen, Xijun Xu, Xue-Ting Wang, Defeng Xing, Nanqi Ren, Duu-Jong Lee
Environmental Research.2024; 260: 119594. CrossRef - Discovery of penicillic acid as a chemical probe against tau aggregation in Alzheimer's disease
Jennifer Shyong, Jinliang Wang, Quoc-Dung Tran Huynh, Marina Fayzullina, Bo Yuan, Ching-Kuo Lee, Thomas Minehan, Paul M. Seidler, Clay C. C. Wang
Chemical Science.2024; 15(48): 20467. CrossRef - Transcriptomic Screening of Alternaria oxytropis Isolated from Locoweed Plants for Genes Involved in Mycotoxin Swaisonine Production
Shuangjie Yuan, Qingmei Zhao, Kun Yu, Ying Gao, Zhengbing Ma, Huanyu Li, Yongtao Yu
Journal of Fungi.2024; 10(1): 88. CrossRef -
Phylogenomics of the psychoactive mushroom genus
Psilocybe
and evolution of the psilocybin biosynthetic gene cluster
Alexander J. Bradshaw, Virginia Ramírez-Cruz, Ali R. Awan, Giuliana Furci, Laura Guzmán-Dávalos, Bryn T. M. Dentinger
Proceedings of the National Academy of Sciences.2024;[Epub] CrossRef - Effects of temperature on the production of ochratoxin A by Aspergillus niger
Yige Zhang, Zhihui Zhang, Qianru Xu, Yangyong Lv, Shuaibing Zhang, Huanchen Zhai, Yuansen Hu, Shan Wei
LWT.2024; 191: 115684. CrossRef - Unraveling the Gene Regulatory Networks of the Global Regulators VeA and LaeA in Aspergillus nidulans
Heungyun Moon, Mi-Kyung Lee, Ilhan Bok, Jin Woo Bok, Nancy P. Keller, Jae-Hyuk Yu, Gustavo H. Goldman
Microbiology Spectrum.2023;[Epub] CrossRef - Discovery of pyranonaphthoquinones and an eighteen-membered ring macrolide from the rhizospheric soil-derived fungus Phialocephala sp. YUD18001 by OSMAC strategy
Fei Xie, Yue Sun, Zhi-Feng Zi, Wen-Jing Wang, Dai-Yu Wan, Hao Zhou, Zhong-Tao Ding
Fitoterapia.2023; 171: 105690. CrossRef - Editorial: Gene regulation of fungal secondary metabolism
Pinmei Wang, Hee-Soo Park, Wenjie Wang, Wen-Bing Yin
Frontiers in Microbiology.2023;[Epub] CrossRef - Construction of RNA silencing system of Penicillium brevicompactum and genetic manipulation of the regulator pbpcz in mycophenolic acid production
TingTing Hu, Jingjing Wang, Mianhui Chen, Lin Lin, Wei Wei, Dongzhi Wei
Fungal Genetics and Biology.2023; 169: 103843. CrossRef - Quantitative characterization of filamentous fungal promoters on a single-cell resolution to discover cryptic natural products
Peng-Lin Wei, Jie Fan, Jingwen Yu, Zihui Ma, Xian Guo, Nancy P. Keller, Erwei Li, Chunbo Lou, Wen-Bing Yin
Science China Life Sciences.2023; 66(4): 848. CrossRef - Fungal BGCs for Production of Secondary Metabolites: Main Types, Central Roles in Strain Improvement, and Regulation According to the Piano Principle
Alexander A. Zhgun
International Journal of Molecular Sciences.2023; 24(13): 11184. CrossRef - Fungal secondary metabolism is governed by an RNA-binding protein CsdA/RsdA complex
Zili Song, Shuang Zhou, Hongjiao Zhang, Nancy P. Keller, Berl R. Oakley, Xiao Liu, Wen-Bing Yin
Nature Communications.2023;[Epub] CrossRef - Eco-Friendly Biocontrol Strategies of Alternaria Phytopathogen Fungus: A Focus on Gene-Editing Techniques
Domingo Cesar Carrascal-Hernández, Edwin Flórez-López, Yeimmy Peralta-Ruiz, Clemencia Chaves-López, Carlos David Grande-Tovar
Agriculture.2022; 12(10): 1722. CrossRef - Nitrogen source as a modulator of the metabolic activity of Pedobacter lusitanus NL19: a transcriptomic approach
Covas C., Vaz A., Almeida B., Lourenço J., Figueiredo G., Franco O. L., Mendo S., Caetano T.
Applied Microbiology and Biotechnology.2022; 106(4): 1583. CrossRef - Antarctic fungi with antibiotic potential isolated from Fort William Point, Antarctica
Eunice Ordóñez-Enireb, Roberto V. Cucalón, Diana Cárdenas, Nadia Ordóñez, Santiago Coello, Paola Elizalde, Washington B. Cárdenas
Scientific Reports.2022;[Epub] CrossRef - Whole-Genome Sequence Analysis of an Endophytic Fungus Alternaria sp. SPS-2 and Its Biosynthetic Potential of Bioactive Secondary Metabolites
Jianyun Tao, Xuelian Bai, Mingyuan Zeng, Mengshi Li, Zhe Hu, Yunfen Hua, Huawei Zhang
Microorganisms.2022; 10(9): 1789. CrossRef - Transcriptome Analysis Identifies a Gene Cluster for the Biosynthesis of Biruloquinone, a Rare Phenanthraquinone, in a Lichen-Forming Fungus Cladonia macilenta
Wonyong Kim, Min-Hye Jeong, Sung-Hwan Yun, Jae-Seoun Hur
Journal of Fungi.2021; 7(5): 398. CrossRef - Fungal Secondary Metabolism
Javier Avalos, M. Carmen Limón
Encyclopedia.2021; 2(1): 1. CrossRef - Presence, Mode of Action, and Application of Pathway Specific Transcription Factors in Aspergillus Biosynthetic Gene Clusters
Wenjie Wang, Yuchao Yu, Nancy P. Keller, Pinmei Wang
International Journal of Molecular Sciences.2021; 22(16): 8709. CrossRef - Involvement of BbTpc1, an important Zn(II)2Cys6 transcriptional regulator, in chitin biosynthesis, fungal development and virulence of an insect mycopathogen
Lei Qiu, Jing Zhang, Ji-Zheng Song, Shun-Juan Hu, Tong-Sheng Zhang, Ze Li, Juan-Juan Wang, Wen Cheng
International Journal of Biological Macromolecules.2021; 166: 1162. CrossRef - Depside and Depsidone Synthesis in Lichenized Fungi Comes into Focus through a Genome-Wide Comparison of the Olivetoric Acid and Physodic Acid Chemotypes of Pseudevernia furfuracea
Garima Singh, Daniele Armaleo, Francesco Dal Grande, Imke Schmitt
Biomolecules.2021; 11(10): 1445. CrossRef - Comparative Transcriptome Analysis of Genes Involved in Sesquiterpene Alkaloid Biosynthesis in Trichoderma longibrachiatum MD33 and UN32
Xu Qian, Hui Jin, Zhuojun Chen, Qingqing Dai, Surendra Sarsaiya, Yitong Qin, Qi Jia, Leilei Jin, Jishuang Chen
Frontiers in Microbiology.2021;[Epub] CrossRef - Activation of biosynthetic gene clusters by the global transcriptional regulator TRI6 in Fusarium graminearum
Kristina Shostak, Christopher Bonner, Amanda Sproule, Indira Thapa, Samuel W. J. Shields, Barbara Blackwell, John Vierula, David Overy, Rajagopal Subramaniam
Molecular Microbiology.2020; 114(4): 664. CrossRef - Diverse bioactive metabolites from Penicillium sp. MMA derived from the red sea: structure identification and biological activity studies
Ann G. Boulis, Ahmed A. Hamed, Mohamed E. El-awady, Attia R. Mohamed, Essam M. Eliwa, Mohsen M. S. Asker, Mohamed Shaaban
Archives of Microbiology.2020; 202(7): 1985. CrossRef - Pullulan biosynthesis in yeast-like fungal cells is regulated by the transcriptional activator Msn2 and cAMP-PKA signaling pathway
Guang Yang, Guang-Lei Liu, Shu-Jun Wang, Zhen-Ming Chi, Zhe Chi
International Journal of Biological Macromolecules.2020; 157: 591. CrossRef - Chemical repertoire and biosynthetic machinery of the Aspergillus flavus secondary metabolome: A review
Valdet Uka, Jeffrey W. Cary, Matthew D. Lebar, Olivier Puel, Sarah De Saeger, José Diana Di Mavungu
Comprehensive Reviews in Food Science and Food Safety.2020; 19(6): 2797. CrossRef - Secondary Metabolites of the Rice Blast Fungus Pyricularia oryzae: Biosynthesis and Biological Function
Takayuki Motoyama
International Journal of Molecular Sciences.2020; 21(22): 8698. CrossRef - Fungal evolution: cellular, genomic and metabolic complexity
Miguel A. Naranjo‐Ortiz, Toni Gabaldón
Biological Reviews.2020; 95(5): 1198. CrossRef - Regulation of Secondary Metabolism in the Penicillium Genus
Christelle El Hajj Assaf, Chrystian Zetina-Serrano, Nadia Tahtah, André El Khoury, Ali Atoui, Isabelle P. Oswald, Olivier Puel, Sophie Lorber
International Journal of Molecular Sciences.2020; 21(24): 9462. CrossRef - Metabolomics Reveals the Response of the Phenylpropanoid Biosynthesis Pathway to Starvation Treatment in the Grape Endophyte Alternaria sp. MG1
Yao Lu, Jinxin Che, Xiaoguang Xu, Bing Pang, Xixi Zhao, Yanlin Liu, Junling Shi
Journal of Agricultural and Food Chemistry.2020; 68(4): 1126. CrossRef - An overview on the biosynthesis and metabolic regulation of monacolin K/lovastatin
Yaru Zhang, Zhiting Chen, Qinyou Wen, Zixiao Xiong, Xiaohua Cao, Zhenghuai Zheng, Yangxin Zhang, Zhiwei Huang
Food & Function.2020; 11(7): 5738. CrossRef - Strategies for Discovering New Antibiotics from Bacteria in the Post-Genomic Era
Jia-Wei Zhu, Si-Jia Zhang, Wen-Guang Wang, Hui Jiang
Current Microbiology.2020; 77(11): 3213. CrossRef - Functional characterization of the sterigmatocystin secondary metabolite gene cluster in the filamentous fungus Podospora anserina: involvement in oxidative stress response, sexual development, pigmentation and interspecific competitions
Ling Shen, François‐Hugues Porée, Thomas Gaslonde, Hervé Lalucque, Florence Chapeland‐Leclerc, Gwenaël Ruprich‐Robert
Environmental Microbiology.2019; 21(8): 3011. CrossRef - Functional characterization of host toxic EcdB transcription factor protein of echinocandin B biosynthetic gene cluster
Arvind Kumar, Vinay Kumar, Antresh Kumar
Biotechnology and Applied Biochemistry.2019; 66(4): 626. CrossRef - Sterol inhibitor “Fluconazole” enhance the Taxol yield and molecular expression of its encoding genes cluster from Aspergillus flavipes
Ashraf S.A. El-Sayed, Dalia M.I. Ali, Marwa A. Yassin, Rawia A. Zayed, Gul Shad Ali
Process Biochemistry.2019; 76: 55. CrossRef - Progress and Challenges: Development and Implementation of CRISPR/Cas9 Technology in Filamentous Fungi
Qiang Wang, Jeffrey J. Coleman
Computational and Structural Biotechnology Journal.2019; 17: 761. CrossRef - Aspergillus flavus NRRL 3251 Growth, Oxidative Status, and Aflatoxins Production Ability In Vitro under Different Illumination Regimes
Tihomir Kovač, Bojan Šarkanj, Biljana Crevar, Marija Kovač, Ante Lončarić, Ivica Strelec, Chibundu N. Ezekiel, Michael Sulyok, Rudolf Krska
Toxins.2018; 10(12): 528. CrossRef - Genomic diversity in ochratoxigenic and non ochratoxigenic strains of Aspergillus carbonarius
Gemma Castellá, M. Rosa Bragulat, Laura Puig, Walter Sanseverino, F. Javier Cabañes
Scientific Reports.2018;[Epub] CrossRef - From genomics to metabolomics, moving toward an integrated strategy for the discovery of fungal secondary metabolites
T. Hautbergue, E. L. Jamin, L. Debrauwer, O. Puel, I. P. Oswald
Natural Product Reports.2018; 35(2): 147. CrossRef - Chromatin‐level regulation of the fragmented dothistromin gene cluster in the forest pathogen Dothistroma septosporum
Pranav Chettri, Pierre‐Yves Dupont, Rosie E. Bradshaw
Molecular Microbiology.2018; 107(4): 508. CrossRef -
Cys
2
His
2
Zinc Finger Transcription Factor BcabaR1 Positively Regulates Abscisic Acid Production in Botrytis cinerea
Yingming Wang, Jinyan Zhou, Juan Zhong, Di Luo, Zhemin Li, Jie Yang, Dan Shu, Hong Tan, Harold L. Drake
Applied and Environmental Microbiology.2018;[Epub] CrossRef - Identification of the decumbenone biosynthetic gene cluster in Penicillium decumbens and the importance for production of calbistrin
Sietske Grijseels, Carsten Pohl, Jens Christian Nielsen, Zahida Wasil, Yvonne Nygård, Jens Nielsen, Jens C. Frisvad, Kristian Fog Nielsen, Mhairi Workman, Thomas Ostenfeld Larsen, Arnold J. M. Driessen, Rasmus John Normand Frandsen
Fungal Biology and Biotechnology.2018;[Epub] CrossRef - Dissimilar pigment regulation in Serpula lacrymans and Paxillus involutus during inter-kingdom interactions
James P. Tauber, Ramses Gallegos-Monterrosa, Ákos T. Kovács, Ekaterina Shelest, Dirk Hoffmeister
Microbiology.2018; 164(1): 65. CrossRef - Enhanced hypocrellin production via coexpression of alpha-amylase and hemoglobin genes in Shiraia bambusicola
Ruijie Gao, Huaxiang Deng, Zhengbing Guan, Xiangru Liao, Yujie Cai
AMB Express.2018;[Epub] CrossRef - Engineering of the Filamentous Fungus Penicillium chrysogenum as Cell Factory for Natural Products
Fernando Guzmán-Chávez, Reto D. Zwahlen, Roel A. L. Bovenberg, Arnold J. M. Driessen
Frontiers in Microbiology.2018;[Epub] CrossRef - Condition‐dependent co‐regulation of genomic clusters of virulence factors in the grapevine trunk pathogen Neofusicoccum parvum
Mélanie Massonnet, Abraham Morales‐Cruz, Rosa Figueroa‐Balderas, Daniel P. Lawrence, Kendra Baumgartner, Dario Cantu
Molecular Plant Pathology.2018; 19(1): 21. CrossRef - Enhanced hypocrellin production of Shiraia sp. SUPER-H168 by overexpression of alpha-amylase gene
Ruijie Gao, Zhecun Xu, Huaxiang Deng, Zhengbing Guan, Xiangru Liao, Ye Zhao, Xiaohui Zheng, Yujie Cai, Marie-Joelle Virolle
PLOS ONE.2018; 13(5): e0196519. CrossRef - Activation of Aflatoxin Biosynthesis Alleviates Total ROS in Aspergillus parasiticus
Gabriel Kenne, Phani Gummadidala, Mayomi Omebeyinje, Ananda Mondal, Dominic Bett, Sandra McFadden, Sydney Bromfield, Nora Banaszek, Michelle Velez-Martinez, Chandrani Mitra, Isabelle Mikell, Saurabh Chatterjee, Josephine Wee, Anindya Chanda
Toxins.2018; 10(2): 57. CrossRef - Strategies to diversify natural products for drug discovery
Gang Li, Hong‐Xiang Lou
Medicinal Research Reviews.2018; 38(4): 1255. CrossRef -
Regulatory cascade and biological activity of
Beauveria bassiana
oosporein that limits bacterial growth after host death
Yanhua Fan, Xi Liu, Nemat O. Keyhani, Guirong Tang, Yan Pei, Wenwen Zhang, Sheng Tong
Proceedings of the National Academy of Sciences.2017;[Epub] CrossRef - The GATA-Type Transcription Factor Csm1 Regulates Conidiation and Secondary Metabolism in Fusarium fujikuroi
Eva-Maria Niehaus, Julia Schumacher, Immo Burkhardt, Patrick Rabe, Martin Münsterkötter, Ulrich Güldener, Christian M. K. Sieber, Jeroen S. Dickschat, Bettina Tudzynski
Frontiers in Microbiology.2017;[Epub] CrossRef - A GATA-type transcription factor AcAREB for nitrogen metabolism is involved in regulation of cephalosporin biosynthesis in Acremonium chrysogenum
Feifei Guan, Yuanyuan Pan, Jinyang Li, Gang Liu
Science China Life Sciences.2017; 60(9): 958. CrossRef - Discovery of McrA, a master regulator of Aspergillus secondary metabolism
C. Elizabeth Oakley, Manmeet Ahuja, Wei‐Wen Sun, Ruth Entwistle, Tomohiro Akashi, Junko Yaegashi, Chun‐Jun Guo, Gustavo C. Cerqueira, Jennifer Russo Wortman, Clay C. C. Wang, Yi‐Ming Chiang, Berl R. Oakley
Molecular Microbiology.2017; 103(2): 347. CrossRef - Tpc1 is an important Zn(II)2Cys6 transcriptional regulator required for polarized growth and virulence in the rice blast fungus
Rita Galhano, Adriana Illana, Lauren S. Ryder, Julio Rodríguez-Romero, Marie Demuez, Muhammad Badaruddin, Ana Lilia Martinez-Rocha, Darren M. Soanes, David J. Studholme, Nicholas J. Talbot, Ane Sesma, Paul Birch
PLOS Pathogens.2017; 13(7): e1006516. CrossRef - Mechanism and regulation of sorbicillin biosynthesis by Penicillium chrysogenum
Fernando Guzmán‐Chávez, Oleksandr Salo, Yvonne Nygård, Peter P. Lankhorst, Roel A. L. Bovenberg, Arnold J. M. Driessen
Microbial Biotechnology.2017; 10(4): 958. CrossRef - Regulatory Mechanism of Mycotoxin Tenuazonic Acid Production in Pyricularia oryzae
Choong-Soo Yun, Takayuki Motoyama, Hiroyuki Osada
ACS Chemical Biology.2017; 12(9): 2270. CrossRef - Transcriptomic and metabolomic profiling of ionic liquid stimuli unveils enhanced secondary metabolism in Aspergillus nidulans
Paula C. Alves, Diego O. Hartmann, Oscar Núñez, Isabel Martins, Teresa L. Gomes, Helga Garcia, Maria Teresa Galceran, Richard Hampson, Jörg D. Becker, Cristina Silva Pereira
BMC Genomics.2016;[Epub] CrossRef - The Genomes of Three Uneven Siblings: Footprints of the Lifestyles of Three Trichoderma Species
Monika Schmoll, Christoph Dattenböck, Nohemí Carreras-Villaseñor, Artemio Mendoza-Mendoza, Doris Tisch, Mario Ivan Alemán, Scott E. Baker, Christopher Brown, Mayte Guadalupe Cervantes-Badillo, José Cetz-Chel, Gema Rosa Cristobal-Mondragon, Luis Delaye, Ed
Microbiology and Molecular Biology Reviews.2016; 80(1): 205. CrossRef - Microbial interactions: ecology in a molecular perspective
Raíssa Mesquita Braga, Manuella Nóbrega Dourado, Welington Luiz Araújo
Brazilian Journal of Microbiology.2016; 47: 86. CrossRef - Development of Genetic Dereplication Strains in Aspergillus nidulans Results in the Discovery of Aspercryptin
Yi‐Ming Chiang, Manmeet Ahuja, C. Elizabeth Oakley, Ruth Entwistle, Anabanadam Asokan, Christoph Zutz, Clay C. C. Wang, Berl R. Oakley
Angewandte Chemie.2016; 128(5): 1694. CrossRef - The botrydial biosynthetic gene cluster of Botrytis cinerea displays a bipartite genomic structure and is positively regulated by the putative Zn(II)2Cys6 transcription factor BcBot6
Antoine Porquier, Guillaume Morgant, Javier Moraga, Bérengère Dalmais, Isabelle Luyten, Adeline Simon, Jean-Marc Pradier, Joëlle Amselem, Isidro González Collado, Muriel Viaud
Fungal Genetics and Biology.2016; 96: 33. CrossRef - Secondary metabolite gene clusters in the entomopathogen fungus Metarhizium anisopliae: genome identification and patterns of expression in a cuticle infection model
Nicolau Sbaraini, Rafael Lucas Muniz Guedes, Fábio Carrer Andreis, Ângela Junges, Guilherme Loss de Morais, Marilene Henning Vainstein, Ana Tereza Ribeiro de Vasconcelos, Augusto Schrank
BMC Genomics.2016;[Epub] CrossRef - Identification of a Halogenase Involved in the Biosynthesis of Ochratoxin A in Aspergillus carbonarius
Massimo Ferrara, Giancarlo Perrone, Lucia Gambacorta, Filomena Epifani, Michele Solfrizzo, Antonia Gallo, A. A. Brakhage
Applied and Environmental Microbiology.2016; 82(18): 5631. CrossRef - Deciphering the Anti-Aflatoxinogenic Properties of Eugenol Using a Large-Scale q-PCR Approach
Isaura Caceres, Rhoda El Khoury, Ángel Medina, Yannick Lippi, Claire Naylies, Ali Atoui, André El Khoury, Isabelle Oswald, Jean-Denis Bailly, Olivier Puel
Toxins.2016; 8(5): 123. CrossRef - Modulation of genetic clusters for synthesis of bioactive molecules in fungal endophytes: A review
V.B. Deepika, T.S. Murali, K. Satyamoorthy
Microbiological Research.2016; 182: 125. CrossRef - The global regulator LaeA controls biosynthesis of host-specific toxins, pathogenicity and development of Alternaria alternata pathotypes
Kazumi Takao, Yasunori Akagi, Takashi Tsuge, Yoshiaki Harimoto, Mikihiro Yamamoto, Motoichiro Kodama
Journal of General Plant Pathology.2016; 82(3): 121. CrossRef - Development of Genetic Dereplication Strains in Aspergillus nidulans Results in the Discovery of Aspercryptin
Yi‐Ming Chiang, Manmeet Ahuja, C. Elizabeth Oakley, Ruth Entwistle, Anabanadam Asokan, Christoph Zutz, Clay C. C. Wang, Berl R. Oakley
Angewandte Chemie International Edition.2016; 55(5): 1662. CrossRef - Regulation and Role of Fungal Secondary Metabolites
Juliane Macheleidt, Derek J. Mattern, Juliane Fischer, Tina Netzker, Jakob Weber, Volker Schroeckh, Vito Valiante, Axel A. Brakhage
Annual Review of Genetics.2016; 50(1): 371. CrossRef - Microbial metabolomics in open microscale platforms
Layla J. Barkal, Ashleigh B. Theberge, Chun-Jun Guo, Joe Spraker, Lucas Rappert, Jean Berthier, Kenneth A. Brakke, Clay C. C. Wang, David J. Beebe, Nancy P. Keller, Erwin Berthier
Nature Communications.2016;[Epub] CrossRef - The Fdb3 transcription factor of the Fusarium Detoxification of Benzoxazolinone gene cluster is required for MBOA but not BOA degradation in Fusarium pseudograminearum
Andrew J. Kettle, Jason Carere, Jacqueline Batley, John M. Manners, Kemal Kazan, Donald M. Gardiner
Fungal Genetics and Biology.2016; 88: 44. CrossRef - Phytotoxin production in Aspergillus terreus is regulated by independent environmental signals
Markus Gressler, Florian Meyer, Daniel Heine, Peter Hortschansky, Christian Hertweck, Matthias Brock
eLife.2015;[Epub] CrossRef - Chromosome-level genome map provides insights into diverse defense mechanisms in the medicinal fungus Ganoderma sinense
Yingjie Zhu, Jiang Xu, Chao Sun, Shiguo Zhou, Haibin Xu, David R. Nelson, Jun Qian, Jingyuan Song, Hongmei Luo, Li Xiang, Ying Li, Zhichao Xu, Aijia Ji, Lizhi Wang, Shanfa Lu, Alice Hayward, Wei Sun, Xiwen Li, David C. Schwartz, Yitao Wang, Shilin Chen
Scientific Reports.2015;[Epub] CrossRef - The global regulator FfSge1 is required for expression of secondary metabolite gene clusters but not for pathogenicity in Fusarium fujikuroi
Caroline B. Michielse, Lena Studt, Slavica Janevska, Christian M. K. Sieber, Birgit Arndt, Jose Juan Espino, Hans‐Ulrich Humpf, Ulrich Güldener, Bettina Tudzynski
Environmental Microbiology.2015; 17(8): 2690. CrossRef - Discovery of microbial natural products by activation of silent biosynthetic gene clusters
Peter J. Rutledge, Gregory L. Challis
Nature Reviews Microbiology.2015; 13(8): 509. CrossRef - Penicyclones A–E, Antibacterial Polyketides from the Deep-Sea-Derived Fungus Penicillium sp. F23-2
Wenqiang Guo, Zhenzhen Zhang, Tianjiao Zhu, Qianqun Gu, Dehai Li
Journal of Natural Products.2015; 78(11): 2699. CrossRef - Synthetic biology of fungal natural products
Derek J. Mattern, Vito Valiante, Shiela E. Unkles, Axel A. Brakhage
Frontiers in Microbiology.2015;[Epub] CrossRef - The bZIP transcription factor PfZipA regulates secondary metabolism and oxidative stress response in the plant endophytic fungus Pestalotiopsis fici
Xiuna Wang, Fan Wu, Ling Liu, Xingzhong Liu, Yongsheng Che, Nancy P. Keller, Liyun Guo, Wen-Bing Yin
Fungal Genetics and Biology.2015; 81: 221. CrossRef - Leucine metabolism regulates TRI6 expression and affects deoxynivalenol production and virulence in Fusarium graminearum
Rajagopal Subramaniam, Swara Narayanan, Sean Walkowiak, Li Wang, Manisha Joshi, Hélène Rocheleau, Thérèse Ouellet, Linda J. Harris
Molecular Microbiology.2015; 98(4): 760. CrossRef - Genetic and metabolic engineering of microorganisms for the development of new flavor compounds from terpenic substrates
Murillo L. Bution, Gustavo Molina, Meissa R.E. Abrahão, Gláucia M. Pastore
Critical Reviews in Biotechnology.2015; 35(3): 313. CrossRef - Recent advances in genome mining of secondary metabolite biosynthetic gene clusters and the development of heterologous expression systems in Aspergillus nidulans
Junko Yaegashi, Berl R Oakley, Clay C C Wang
Journal of Industrial Microbiology and Biotechnology.2014; 41(2): 433. CrossRef - Fungal extrolites as a new source for therapeutic compounds and as building blocks for applications in synthetic biology
Ana Lúcia Leitão, Francisco J. Enguita
Microbiological Research.2014; 169(9-10): 652. CrossRef - Spatial and temporal control of fungal natural product synthesis
Fang Yun Lim, Nancy P. Keller
Nat. Prod. Rep..2014; 31(10): 1277. CrossRef - Strategies for mining fungal natural products
Philipp Wiemann, Nancy P Keller
Journal of Industrial Microbiology and Biotechnology.2014; 41(2): 301. CrossRef - Epigenetic Control of Effector Gene Expression in the Plant Pathogenic Fungus Leptosphaeria maculans
Jessica L. Soyer, Mennat El Ghalid, Nicolas Glaser, Bénédicte Ollivier, Juliette Linglin, Jonathan Grandaubert, Marie-Hélène Balesdent, Lanelle R. Connolly, Michael Freitag, Thierry Rouxel, Isabelle Fudal, Nicholas J. Talbot
PLoS Genetics.2014; 10(3): e1004227. CrossRef - A fungal prenyltransferase catalyzes the regular di-prenylation at positions 20 and 21 of paxilline
Chengwei Liu, Motoyoshi Noike, Atsushi Minami, Hideaki Oikawa, Tohru Dairi
Bioscience, Biotechnology, and Biochemistry.2014; 78(3): 448. CrossRef - Screening of a Botrytis cinerea one-hybrid library reveals a Cys2His2 transcription factor involved in the regulation of secondary metabolism gene clusters
Adeline Simon, Bérengère Dalmais, Guillaume Morgant, Muriel Viaud
Fungal Genetics and Biology.2013; 52: 9. CrossRef - Impact of alg3 gene deletion on growth, development, pigment production, protein secretion, and functions of recombinant Trichoderma reesei cellobiohydrolases in Aspergillus niger
Ziyu Dai, Uma K. Aryal, Anil Shukla, Wei-Jun Qian, Richard D. Smith, Jon K. Magnuson, William S. Adney, Gregg T. Beckham, Roman Brunecky, Michael E. Himmel, Stephen R. Decker, Xiaohui Ju, Xiao Zhang, Scott E. Baker
Fungal Genetics and Biology.2013; 61: 120. CrossRef - Aflatoxins, fumonisins, and trichothecenes: a convergence of knowledge
Charles P. Woloshuk, Won-Bo Shim
FEMS Microbiology Reviews.2013; 37(1): 94. CrossRef - Fine De Novo Sequencing of a Fungal Genome Using only SOLiD Short Read Data: Verification on Aspergillus oryzae RIB40
Myco Umemura, Yoshinori Koyama, Itaru Takeda, Hiroko Hagiwara, Tsutomu Ikegami, Hideaki Koike, Masayuki Machida, Mikael Rørdam Andersen
PLoS ONE.2013; 8(5): e63673. CrossRef - Engineering fungal secondary metabolism: A roadmap to novel compounds
Daniel H. Scharf, Axel A. Brakhage
Journal of Biotechnology.2013; 163(2): 179. CrossRef - Disruption of the nitrogen regulatory gene AcareA in Acremonium chrysogenum leads to reduction of cephalosporin production and repression of nitrogen metabolism
Jinyang Li, Yuanyuan Pan, Gang Liu
Fungal Genetics and Biology.2013; 61: 69. CrossRef - The transport of phenylacetic acid across the peroxisomal membrane is mediated by the PaaT protein in Penicillium chrysogenum
Marta Fernández-Aguado, Ricardo V. Ullán, Fernando Teijeira, Raquel Rodríguez-Castro, Juan F. Martín
Applied Microbiology and Biotechnology.2013; 97(7): 3073. CrossRef - Isolation and Characterization of Double Deletion Mutants of nsdD and veA or nsdC, the Genes Positive Regulating Sexual Development of Aspergillus nidulans
Lee-Han Kim, Ha-Eun Kim, Dong-Min Han
The Korean Journal of Microbiology.2013; 49(4): 419. CrossRef - Regulation of fungal secondary metabolism
Axel A. Brakhage
Nature Reviews Microbiology.2013; 11(1): 21. CrossRef - VeA and MvlA repression of the cryptic orsellinic acid gene cluster in Aspergillus nidulans involves histone 3 acetylation
Jin Woo Bok, Alexandra A. Soukup, Elizabeth Chadwick, Yi‐Ming Chiang, Clay C. C. Wang, Nancy P. Keller
Molecular Microbiology.2013; 89(5): 963. CrossRef - Distinct Amino Acids of Histone H3 Control Secondary Metabolism in Aspergillus nidulans
Hans-Wilhelm Nützmann, Juliane Fischer, Kirstin Scherlach, Christian Hertweck, Axel A. Brakhage
Applied and Environmental Microbiology.2013; 79(19): 6102. CrossRef - Strategies for strain improvement in Fusarium fujikuroi: overexpression and localization of key enzymes of the isoprenoid pathway and their impact on gibberellin biosynthesis
Sabine Albermann, Pia Linnemannstöns, Bettina Tudzynski
Applied Microbiology and Biotechnology.2013; 97(7): 2979. CrossRef - MIDDAS-M: Motif-Independent De Novo Detection of Secondary Metabolite Gene Clusters through the Integration of Genome Sequencing and Transcriptome Data
Myco Umemura, Hideaki Koike, Nozomi Nagano, Tomoko Ishii, Jin Kawano, Noriko Yamane, Ikuko Kozone, Katsuhisa Horimoto, Kazuo Shin-ya, Kiyoshi Asai, Jiujiang Yu, Joan W. Bennett, Masayuki Machida, Kap-Hoon Han
PLoS ONE.2013; 8(12): e84028. CrossRef - FcStuA from Fusarium culmorum Controls Wheat Foot and Root Rot in a Toxin Dispensable Manner
Matias Pasquali, Francesca Spanu, Barbara Scherm, Virgilio Balmas, Lucien Hoffmann, Kim E. Hammond-Kosack, Marco Beyer, Quirico Migheli, Yin-Won Lee
PLoS ONE.2013; 8(2): e57429. CrossRef - The AreA transcription factor in Fusarium graminearum regulates the use of some nonpreferred nitrogen sources and secondary metabolite production
Henriette Giese, Teis Esben Sondergaard, Jens Laurids Sørensen
Fungal Biology.2013; 117(11-12): 814. CrossRef - Recent advances in the biosynthesis of penicillins, cephalosporins and clavams and its regulation
Gulay Ozcengiz, Arnold L. Demain
Biotechnology Advances.2013; 31(2): 287. CrossRef - Segregation of secondary metabolite biosynthesis in hybrids of Fusarium fujikuroi and Fusarium proliferatum
L. Studt, C. Troncoso, F. Gong, P. Hedden, C. Toomajian, J.F. Leslie, H.-U. Humpf, M.C. Rojas, B. Tudzynski
Fungal Genetics and Biology.2012; 49(7): 567. CrossRef - Order in the playground
Ben Field, Anne Osbourn
Mobile Genetic Elements.2012; 2(1): 46. CrossRef - Overexpression of the Aspergillus nidulans histone 4 acetyltransferase EsaA increases activation of secondary metabolite production
Alexandra A. Soukup, Yi‐Ming Chiang, Jin Woo Bok, Yazmid Reyes‐Dominguez, Berl R. Oakley, Clay C. C. Wang, Joseph Strauss, Nancy P. Keller
Molecular Microbiology.2012; 86(2): 314. CrossRef - Advances in Aspergillus secondary metabolite research in the post-genomic era
James F. Sanchez, Amber D. Somoza, Nancy P. Keller, Clay C. C. Wang
Natural Product Reports.2012; 29(3): 351. CrossRef - Identification and Characterization of a Novel Diterpene Gene Cluster in Aspergillus nidulans
Kirsi Bromann, Mervi Toivari, Kaarina Viljanen, Anu Vuoristo, Laura Ruohonen, Tiina Nakari-Setälä, Gustavo Henrique Goldman
PLoS ONE.2012; 7(4): e35450. CrossRef - Fungal endophytes of grasses
Aiko Tanaka, Daigo Takemoto, Tetsuya Chujo, Barry Scott
Current Opinion in Plant Biology.2012; 15(4): 462. CrossRef - NosA, a transcription factor important in Aspergillus fumigatus stress and developmental response, rescues the germination defect of a laeA deletion
Alexandra A. Soukup, Mitra Farnoodian, Erwin Berthier, Nancy P. Keller
Fungal Genetics and Biology.2012; 49(11): 857. CrossRef - An Aspergillus nidulans bZIP response pathway hardwired for defensive secondary metabolism operates through aflR
Wen‐Bing Yin, Saori Amaike, Dana J. Wohlbach, Audrey P. Gasch, Yi‐Ming Chiang, Clay C. C. Wang, Jin Woo Bok, Marko Rohlfs, Nancy P. Keller
Molecular Microbiology.2012; 83(5): 1024. CrossRef