Skip Navigation
Skip to contents

Journal of Microbiology : Journal of Microbiology

OPEN ACCESS
SEARCH
Search

Most cited

Page Path
HOME > Browse Articles > Most cited
2043 Most cited
Filter
Filter
Article category
Keywords
Publication year
Authors
Funded articles
Journal Article
UBCG: Up-to-date bacterial core gene set and pipeline for phylogenomic tree reconstruction
Seong-In Na , Yeong Ouk Kim , Seok-Hwan Yoon , Sung-min Ha , Inwoo Baek , Jongsik Chun
J. Microbiol. 2018;56(4):280-285.   Published online February 28, 2018
DOI: https://doi.org/10.1007/s12275-018-8014-6
  • 2,688 View
  • 0 Download
  • 1,134 Crossref
AbstractAbstract PDF
Genome-based phylogeny plays a central role in the future taxonomy and phylogenetics of Bacteria and Archaea by replacing 16S rRNA gene phylogeny. The concatenated core gene alignments are frequently used for such a purpose. The bacterial core genes are defined as single-copy, homologous genes that are present in most of the known bacterial species. There have been several studies describing such a gene set, but the number of species considered was rather small. Here we present the up-to-date bacterial core gene set, named UBCG, and software suites to accommodate necessary steps to generate and evaluate phylogenetic trees. The method was successfully used to infer phylogenomic relationship of Escherichia and related taxa and can be used for the set of genomes at any taxonomic ranks of Bacteria. The UBCG pipeline and file viewer are freely available at https://www.ezbiocloud.net/ tools/ubcg and https://www.ezbiocloud.net/tools/ubcg_viewer, respectively.

Citations

Citations to this article as recorded by  
  • Genome Sequence Analysis Reveals Polyphyly in the Genus Pseudaestuariivita and Supports Reclassification of the Species Pseudaestuariivita rosea as Parasulfitobacter roseus comb.nov
    Mengdan He, Xiaokun Xu, Qingjie Xue, Ang Liu
    Current Microbiology.2026;[Epub]     CrossRef
  • Argyrolobium legumes from an African centre of endemism associate with novel Bradyrhizobium species harbouring unique sets of symbiosis genes
    Mabodiba M. Maake, Chrizelle W. Beukes, Magriet A. van der Nest, Juanita R. Avontuur, Esther K. Muema, Tomasz Stępkowski, Stephanus N. Venter, Emma T. Steenkamp
    Molecular Phylogenetics and Evolution.2026; 214: 108471.     CrossRef
  • Genome-based reassessment of Sphingobacterium reveals the limitation of the fixed dDDH threshold for prokaryotic species delineation
    Shuai Li, Xin-Ran Wang, Wei Zhang, Wen-Jun Li
    Current Research in Microbial Sciences.2026; 10: 100524.     CrossRef
  • Description of Albimonas marina sp. nov., isolated from sea sand on the Yellow Sea Coast
    Hyunwoo Jung, Young Rok Kim, Eunseo Cho, Jung-Sook Lee, Jung-Hoon Yoon, Ampaitip Sukhoom, Wonyong Kim
    Current Microbiology.2026;[Epub]     CrossRef
  • Unveiling novel antimicrobial peptides from the ruminant gastrointestinal microbiomes: A deep learning-driven approach yields an anti-MRSA candidate
    Hong Shen, Yanru Li, Qingjie Pi, Junru Tian, Xianghan Xu, Zan Huang, Jinhu Huang, Cong Pian, Shengyong Mao
    Journal of Advanced Research.2025; 77: 821.     CrossRef
  • Altererythrobacter arenosus sp. nov., Isolated from Marine Sediment
    Soyeon Ahn, Yunjeong Lee, Veeraya Weerawongwiwat, Jong-Hwa Kim, Jung-Sook Lee, Jung-Hoon Yoon, Ampaitip Sukhoom, Wonyong Kim
    Current Microbiology.2025;[Epub]     CrossRef
  • A metagenomic ‘dark matter’ enzyme catalyses oxidative cellulose conversion
    Clelton A. Santos, Mariana A. B. Morais, Fernanda Mandelli, Evandro A. Lima, Renan Y. Miyamoto, Paula M. R. Higasi, Evandro A. Araujo, Douglas A. A. Paixão, Joaquim M. Junior, Maria L. Motta, Rodrigo S. A. Streit, Luana G. Morão, Claudio B. C. Silva, Luci
    Nature.2025; 639(8056): 1076.     CrossRef
  • Paenibacillus zeirhizosphaerae sp. nov., isolated from surface of the maize (Zea mays) roots in a horticulture field, Hungary
    Dalma Márton, Milán Farkas, Anna Bedics, Erika Tóth, András Táncsics, Károly Bóka, Gergely Maróti, Erzsébet Baka, Balázs Kriszt, Mátyás Cserháti
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Characterisation of Aequorivita ciconiae sp. nov., isolated from oriental stork, Ciconia boyciana
    Jeong-Eun Han, Seomin Kang, So-Yeon Lee, Jin-Woo Bae
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Genomic insights into Marinospirillum alkalitolerans sp. nov., a novel PHB producing bacterium from an Indian impact crater, and an emended description of family Oceanospirillaceae
    Amaraja Joshi, Sonia Thite, Devika Godbole, Dibyajyoti Boruah, Dev Kant Sindhu, Atharva Prabhu, Neetha Joseph, Amit Yadav, Avinash Sharma, Tushar Lodha
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Cerasicoccus fimbriatus sp. nov., isolated from the mid-ridge of the Southwest Indian Ocean
    Xuanyun Qiu, Beihan Chen, Dan Lin, Guohua Liu, Zhiyi Su, Mingzhe Zhang, Kai Tang
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Thiobacillus sedimenti sp. nov., a chemolithoautotrophic sulphur-oxidizing bacterium isolated from freshwater sediment
    Chenming Dai, Guangye Zhang, Weitie Lin, Jianfei Luo
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Arvimicrobium flavum gen. nov., sp. nov., A Novel Genus in the Family Phyllobacteriaceae Isolated From Forest Soil
    Hyosun Lee, Dhiraj Kumar Chaudhary, Ki-Eun Lee, In-Tae Cha, Won-Jae Chi, Sunho Park, Taegun Seo, Dong-Uk Kim
    Current Microbiology.2025;[Epub]     CrossRef
  • Flavobacterium arundinis sp. nov., Flavobacterium calami sp. nov., Flavobacterium helocola sp. nov. and Flavobacterium flavipallidum sp. nov., isolated from stagnant water in a clump of Phragmites japonica Steud
    Sunho Park, Inhyup Kim, Haejin Woo, Hyunji Lee, Subin Yook, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Facivitalis istanbulensis gen. nov., sp. nov., a novel member of the family Sphingomonadaceae with the potential for aromatic-degradation isolated from Jet A1 fuel
    Simge Arkan-Ozdemir, Miray Üstüntürk-Onan, Esra Ilhan-Sungur
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Streptacidiphilus alkalitolerans sp. nov., Streptacidiphilus cavernicola sp. nov. and Streptacidiphilus jeojiensis sp. nov. isolated from a cave, and an emended description of the genus Streptacidiphilus
    Soon Dong Lee, Hong Lim Yang, In Seop Kim
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Brevibacterium litoralis sp. nov., a cellulose-degrading strain isolated from marine surface sediment
    Quan Yang, Aolin Zhao, Haifei Liu, Jiawei Li, Shujing Wu, Ying Huang, Jie Weng, Mingguo Jiang, Yi Jiang
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Microbacterium rhizophilus sp. nov., an indole acetic acid-producing actinobacterium isolated from rhizosphere soil
    Haifei Liu, Quan Yang, Jiawei Li, Lifang Yang, Aolin Zhao, Ying Huang, Hongcun Liu, Shujing Wu, Mingguo Jiang
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Roseobacter sinensis sp. nov., a marine bacterium capable to synthesize arachidonic acid
    Hong-Chuan Wang, Meng-Han Huang, Dan-Yuan Guo, Wen-Li Liu, Zi-Wen Yang, Dao-Feng Zhang, Wen-Jun Li
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Comprehensive genomic and phenotypic characterization of thermophilic bacterium Sinimarinibacterium thermocellulolyticum sp. nov. HSW-8T, a cellulase-producing bacterium isolated from hot spring water in South Korea
    Yue Jiang, Zhun Li
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Mesorhizobium salmacidum sp. nov. and Mesorhizobium argentiipisi sp. nov. are symbionts of the dry-land forage legumes Lessertia diffusa and Calobota sericea
    Esther K. Muema, Melandré van Lill, Stephanus N. Venter, Wai Yin Chan, Ricu Claassens, Emma T. Steenkamp
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Tetrameric PilZ protein stabilizes stator ring in complex flagellar motor and is required for motility in Campylobacter jejuni
    Yuanyuan Chen, Shoichi Tachiyama, Yuqian Li, Xueyin Feng, Hang Zhao, Yanmin Wu, Yu Guo, María Lara-Tejero, Canfeng Hua, Jun Liu, Beile Gao
    Proceedings of the National Academy of Sciences.2025;[Epub]     CrossRef
  • Proposal of Lactococcus intestinalis Sun et al. 2024 as a Later Heterotypic Synonym of Lactococcus muris Afrizal et al. 2023
    Xin-Yu Zhu, Chun Tao Gu
    Current Microbiology.2025;[Epub]     CrossRef
  • Isolation and characterization of a novel lytic phage K14-2 infecting diverse species of the genus Klebsiella and Raoultella
    Seomin Kang, Jeong-Eun Han, Young-Sik Choi, In-Chul Jeong, Jin-Woo Bae
    Frontiers in Microbiology.2025;[Epub]     CrossRef
  • Jannaschia ovalis sp. nov., a marine bacterium isolated from a tidal flat sediment in the Republic of Korea
    Dae Young Kwon, Sang Hyun Lee, Jong Seong Khim, Xiaoyue Xu, Bogun Kim, In-Geol Choi, Yeonjae Yoo, Jae-Jin Kim
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Erwinia aeris sp. nov., A Novel Bacterium Isolated from the Surface of an Ore in Hubei Province, China
    He-Bao Guo, Hong-Tu Zhu, Yi-Fan Zhang, Fu Yang, Xiao-Tong Ma, Shi-Gui Li, Hai-Lei Wei, Xiao-Xia Zhang
    Current Microbiology.2025;[Epub]     CrossRef
  • Assessing hydrocarbon degradation capacity of Isoptericola peretonis sp. nov. and related species: a comparative study
    Àngela Vidal-Verdú, Adriel Latorre-Pérez, Javier Pascual, Ruth Mañes-Collado, Aitana Nevot-Terraes, Manuel Porcar
    Frontiers in Microbiology.2025;[Epub]     CrossRef
  • Physiological and Genomic Elucidation of Cold-Resilient Rhizobacteria Reveals Plant Growth Promotion by Siderophore Optimization and Enhanced Biocontrol Potential Against Fungal Pathogens
    Pallavi Sharma, Girija Kaushal, Shruti Sinai Borker, Ayush Lepcha, Anil Kumar, Rakshak Kumar
    Journal of Plant Growth Regulation.2025; 44(12): 6953.     CrossRef
  • Unveiling root nodulation in Tribulus terrestris and Roystonea regia via metagenomics analysis
    Saleh Rahimlou, Mahdieh S. Hosseyni Moghadam, Romina Gazis, Elena Karlsen-Ayala, Mohammad Bahram, Timothy Y. James, Leho Tedersoo
    Molecular Genetics and Genomics.2025;[Epub]     CrossRef
  • Methylobacterium litchii sp. nov., Methylobacterium guangdongense sp. nov. and Methylorubrum subtropicum sp. nov., isolated from the phyllosphere of litchi
    Ruifeng Gao, Jiali Li, Huaping Li, Xinqiang Xie, Guang-Da Feng, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • The Genomic Characteristics of Potential Probiotics: Two Streptococcus salivarius Isolates from a Healthy Individual in China
    Mingyue Sun, Qian Li, Feiran Zhang, Ding Yao, Wenhua Huang, Qingyu Lv, Hua Jiang, Decong Kong, Yuhao Ren, Shaolong Chen, Yongqiang Jiang, Peng Liu
    Microorganisms.2025; 13(3): 694.     CrossRef
  • High diversity of nitrifying bacteria and archaea in biofilms from a subsea tunnel
    Linnea F M Kop, Hanna Koch, Paula Dalcin Martins, Carolina Suarez, Sabina Karačić, Frank Persson, Britt-Marie Wilén, Per Hagelia, Mike S M Jetten, Sebastian Lücker
    FEMS Microbiology Ecology.2025;[Epub]     CrossRef
  • Novel Gene Clusters for Secondary Metabolite Synthesis in Mesophotic Sponge‐Associated Bacteria
    Nuo Chen, Liwei Liu, Jingxuan Wang, Deqiang Mao, Hongmei Lu, Tânia Keiko Shishido, Shuai Zhi, Hua Chen, Shan He
    Microbial Biotechnology.2025;[Epub]     CrossRef
  • Enterococcus hailinensis sp. nov., Isolated from Traditional Chinese Pickle
    Ting-Yu Wang, Hao Wang, Chun Tao Gu
    Current Microbiology.2025;[Epub]     CrossRef
  • Three Novel Bacterial Species, Roseateles flavus sp. nov., Roseateles paludis sp. nov., and Roseateles hydrophilus sp. nov., Isolated from Various Water-Related Environments
    Haejin Woo, Geeta Chhetri, Inhyup Kim, Sunho Park, Hyunji Lee, Subin Yook, Taegun Seo
    Current Microbiology.2025;[Epub]     CrossRef
  • Genome mining and metabolite profiling illuminate the taxonomy status and the cytotoxic activity of a mangrove-derived Microbacterium alkaliflavum sp. nov
    Wen-Jin Hu, Li-Xian Deng, Yi-Ying Huang, Xiao-Chun Wang, Jin-Ling Qing, Hao-Jun Zhu, Xing Zhou, Xiao-Ying Zhou, Jie-Mei Chu, Xinli Pan
    BMC Microbiology.2025;[Epub]     CrossRef
  • Curvibacter soli sp. nov., Extensimonas soli sp. nov., Pseudarthrobacter naphthalenicus sp. nov. and Terripilifer ovatus gen. nov., sp. nov., four new species isolated from polluted soil
    Ze-Shen Liu, Ke-Huan Wang, Xiao-Kang Wang, Man Cai, Mei-Ling Yang, Wen-Ke Yang, De-Feng Li, Shuang-Jiang Liu
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Inconstantimicrobium mannanitabidum sp. nov., a novel member of the family Clostridiaceae isolated from anoxic soil under the treatment of reductive soil disinfestation
    Atsuko Ueki, Akio Tonouchi, Sachi Honma, Nobuo Kaku, Katsuji Ueki
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Genomic Scale Analysis Foresees Enteroprotective and Butyrogenic Properties in Brazilian Isolates of Lactiplantibacillus plantarum
    Thayra Gomes dos Santos, Karina Araujo Gomes dos Santos, Eddy José Francisco de Oliveira, Bertram Brenig, Elinalva Maciel Paulo, Pedro Henrique Marques, Valbert Nascimento Cardoso, Flávia Figueira Aburjaile, Siomar Castro Soares, Wanderson Marques da Silv
    Probiotics and Antimicrobial Proteins.2025; 17(5): 3713.     CrossRef
  • Comprehensive Phenotypic Characterization and Genomic Analysis Unveil the Probiotic Potential of Bacillus velezensis K12
    Yingying Tang, Tian Li, Yihong Huang, Liangliang Wu, Xiaobo Liu, Ruichao Yue, Jianmin Yuan
    Animals.2025; 15(6): 798.     CrossRef
  • Halomonas pelophila sp. nov., isolated from mud and Halomonas aquatica sp. nov., isolated from marine water
    Subin Yook, Inhyup Kim, Sunho Park, Haejin Woo, Hyunji Lee, Taegun Seo
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Bioremediation of chromium (VI) from mining-contaminated soil using Klebsiella sp. (BH-A1): environmental implications
    Anjali Srivastava, Asha Lata Singh, Aniruddha Kumar, Alok Kumar
    Environmental Geochemistry and Health.2025;[Epub]     CrossRef
  • Superior Resolution Profiling of the Coleofasciculus Microbiome by Amplicon Sequencing of the Complete 16S rRNA Gene and ITS Region
    Pia Marter, Heike M. Freese, Victoria Ringel, Henner Brinkmann, Silke Pradella, Manfred Rohde, Michal Jarek, Cathrin Spröer, Irene Wagner‐Döbler, Jörg Overmann, Boyke Bunk, Jörn Petersen
    Environmental Microbiology Reports.2025;[Epub]     CrossRef
  • Sulfurimonas microaerophilic sp. nov. and Sulfurimonas diazotrophicus sp. nov.: Two Novel Nitrogen-Fixing and Hydrogen- and Sulfur-Oxidizing Chemolithoautotrophs Within the Campylobacteria Isolated from Mangrove Sediments
    Yangsheng Zhong, Yufei Li, Zhaodi Wang, Liang Cui, Shiwei Lv, Han Zhu, Qing Yuan, Qiliang Lai, Shasha Wang, Lijing Jiang
    Microorganisms.2025; 13(4): 713.     CrossRef
  • Uliginosibacterium silvisoli sp. nov., Isolated from Subtropical Forest Soil in Hunan Province, China
    Yu Lv, Qi Zhang, Le Liu, Jian He, Shimei Wang, Qirong Shen
    Current Microbiology.2025;[Epub]     CrossRef
  • Evidence of in vitro mecB -mediated β-lactam antibiotic resistance transfer to Staphylococcus aureus from Macrococcus psychrotolerans sp. nov., a psychrophilic bacterium
    Ivana Mašlaňová, Vojtěch Kovařovic, Tibor Botka, Pavel Švec, Ivo Sedláček, Ondrej Šedo, Adéla Finstrlová, Meina Neumann-Schaal, Sarah Kirstein, Sybille Schwendener, Eva Staňková, Kristína Rovňáková, Petr Petráš, Jiří Doškař, Vincent Perreten, Roman Pantůč
    Applied and Environmental Microbiology.2025;[Epub]     CrossRef
  • Mixotrophic cyanobacteria are critical active diazotrophs in polychlorinated biphenyl-contaminated paddy soil
    Wenbo Hu, Ying Teng, Xiaomi Wang, Yongfeng Xu, Yi Sun, Hongzhe Wang, Yanning Li, Shixiang Dai, Ming Zhong, Yongming Luo
    ISME Communications.2025;[Epub]     CrossRef
  • Meridianimarinicoccus marinus sp. nov., Isolated from Tidal Flat
    Min-Seok Kang, Jae-Yon Yu, Hyung-Seop Kim, Ke Dong, Sathiyaraj Srinivasan, Sang-Seob Lee
    Current Microbiology.2025;[Epub]     CrossRef
  • Metabolomic and genomic insights into Micromonospora carbonacea subsp. caeruleus for anti-colorectal compound
    Tepakorn Kongsaya, Nuttaporn Emthomya, Chananan Ngamcharungchit, Aiyada Aroonsri, Umaporn Uawisetwathana, Thapanee Pruksatrakul, Jirayut Euanorasetr, Bungonsiri Intra
    Applied Microbiology and Biotechnology.2025;[Epub]     CrossRef
  • Marivivens marinum sp. nov., isolated from tidal flat, Gochang, South Korea
    Min-Seok Kang, Hyung-Seop Kim, Jae-yon Yu, Sathiyaraj Srinivasan, Sang-Seob Lee
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Antrihabitans spumae sp. nov., a novel bacterium isolated from stable foams formed in wastewater treatment plants and emended description of the genus Antrihabitans
    Jhon A. Suescún-Sepúlveda, Raúl Riesco, Steve Petrovski, Jacques Soddell, Vartul Sangal, Amanda L. Jones, Fernando Sánchez-Juanes, Robert J. Seviour, Michael Goodfellow, Martha E. Trujillo
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Insights into Leuconostoc-clade as starters in Chinese paocai: Shaping microbial communities for rapid, safe, and flavor-preserving fermentation
    Xinyu Hu, Mengke Cheng, Meng Zhang, Biyue Yang, Rong Wang, Juan Bai, Jiayan Zhang, Wei Wei, Lin Zhu, Xiang Xiao
    Food Bioscience.2025; 68: 106410.     CrossRef
  • Buchananella felis sp. nov. isolated from feline pyothorax
    Simon Feyer, Stephanie Fuss, Natascha Gross, Sandra Zumwald, Isabelle Brodard, Sonja Kittl
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Genome mining reveals the biosynthetic potential of a novel Lysinibacillus zambalensis sp. nov., isolated from a hyperalkaline spring
    Joyce Amarachi Aja, Lawrence Dave Llorin, Kenji Rowel Q. Lim, Jade Joshua Teodosio, Erwin John Sioson, Ron L. Dy, Carlo A. Arcilla, Doralyn S. Dalisay, Jose Enrico Hizon Lazaro
    Archives of Microbiology.2025;[Epub]     CrossRef
  • Genetic and species rearrangements in microbial consortia impact biodegradation potential
    Zaki Saati-Santamaría, Pilar Navarro-Gómez, Juan A Martínez-Mancebo, Maitane Juárez-Mugarza, Amando Flores, Inés Canosa
    The ISME Journal.2025;[Epub]     CrossRef
  • Massilia paldalensis sp. nov., Isolated from Stream Bank Soil
    Nhi Thi Ai Nguyen, Jaisoo Kim
    Diversity.2025; 17(5): 327.     CrossRef
  • Description of Labrys sedimenti sp. nov., isolated from a diclofenac-degrading enrichment culture, and genome-based reclassification of Labrys portucalensis as a later heterotypic synonym of Labrys neptuniae
    Andrea Csépányi, András Táncsics, Márton Pápai, Erzsébet Baka, Erika Tóth, Károly Bóka, Hussein Daood, István Szabó, Balázs Kriszt
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Nocardioides eburneus sp. nov., isolated from commercial soil
    Min-Seok Kang, Jae-yon Yu, Yong Ho Kim, Ke Dong, Sathiyaraj Srinivasan, Sang-Seob Lee
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Gracilibacillus pellucidus sp. nov., a moderately halophilic bacterium isolated from saline soil in Xinjiang province, China
    Zengqin Zhang, Hui Wang, Mengli Xia, Wenjing Li, Pan Zhang, Yanwei Wang, Linpei Liu, Peixin Li, Yong Zhuang, Furong Tan
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Pontibacter rufus sp. nov., Pontibacter humidus sp. nov. and Pontibacter coccineus sp. nov. isolated from UV-irradiated soil in Korea
    Seona Park, Hyang Burm Lee, Sathiyaraj Srinivasan, Myung Kyum Kim
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Insights into the bacterial fraction of sediments from the South China Sea: physiological, chemotaxonomic, and genomic characterization of seven novel members of the Bacillaceae family
    Shu-Tong Ge, Hong Cheng, Ying-Wen Zhong, Jia-Ling Tang, Xin-Yue Huang, Bin Wei, Yue-Hong Wu, Chun-Sheng Wang
    Frontiers in Microbiology.2025;[Epub]     CrossRef
  • A sustainable solution for eucalyptus cultivation under environmental stresses: novel Pseudomonas species with plant growth-promoting traits
    Tian Liu, Yuhan Jiang, Weishan Zhang, Lu Lin, Xinlei Fan
    Plant and Soil.2025;[Epub]     CrossRef
  • Cultivation and metabolic versatility of novel and ubiquitous chemolithoautotrophic Campylobacteria from mangrove sediments
    Liang Cui, Yangsheng Zhong, Yufei Li, Stefan M. Sievert, Zhaobin Huang, Wanpeng Wang, Maxim Rubin-Blum, Xiaxing Cao, Yong Wang, Zongze Shao, Qiliang Lai, Shasha Wang, Lijing Jiang, Weimin Sun
    Microbiology Spectrum.2025;[Epub]     CrossRef
  • Nitrogen fixation in Pampinifervens, a new species-rich genus of Aquificaceae that inhabits a wide pH range in terrestrial hot springs
    Marike Palmer, Nancy O. Nou, Lara A. Turello, Carolyn E. Power, John C. Ong, Jonathan K. Covington, Dengxun Lai, Xavier Mayali, Anna-Louise Reysenbach, Yan-Ling Qi, Jeremy A. Dodsworth, Jian-Yu Jiao, Lan Liu, Zheng-Han Lian, Meng-Meng Li, Yitai Liu, Ranja
    Systematic and Applied Microbiology.2025; 48(5): 126644.     CrossRef
  • Polyphasic taxonomy and genome mining of Desertivibrio insolitus gen. nov., sp. nov., a novel psychrotolerant pectin-degrading actinobacterium isolated from desert soil
    Shuai Li, Jun Liu, Huan-Huan He, Jia-Rui Han, Jie Huang, Wen-Hui Lian, Yong-Hong Liu, Lei Dong, Wen-Jun Li
    Current Research in Microbial Sciences.2025; 9: 100438.     CrossRef
  • Exploring the Biosynthetic Potential of Microorganisms from the South China Sea Cold Seep Using Culture-Dependent and Culture-Independent Approaches
    Gang-Ao Hu, Huai-Ying Sun, Qun-Jian Yin, He Wang, Shi-Yi Liu, Bin-Gui Wang, Hong Wang, Xin Li, Bin Wei
    Marine Drugs.2025; 23(8): 313.     CrossRef
  • Parerythrobacter aurantius sp. nov., a Member of the Family Erythrobacteraceae Isolated from a Coastal Breakwater Stone
    Yang Liu, Tao Pei, Juan Du, Ming-Rong Deng, Honghui Zhu
    Current Microbiology.2025;[Epub]     CrossRef
  • Oryzifoliimicrobium ureilyticus gen. nov., sp. nov., a Novel Phosphate-Solubilizing and Siderophore-Producing Bacterium Within the Family Rhizobiaceae
    Guo-Hong Liu, Ling Yao, Peng Gao, Shu-Qun Zhang, Bing Li, Christopher Rensing, Wen-Qing Li, Shun-Gui Zhou
    Current Microbiology.2025;[Epub]     CrossRef
  • Flavobacterium algoriphilum sp. nov., Flavobacterium arabinosi sp. nov., Flavobacterium cryoconiti sp. nov., Flavobacterium galactosi sp. nov., Flavobacterium melibiosi sp. nov., and Flavobacterium algoris sp. nov., six novel cold-adapted bacteria isolate
    Lei-Lei Yang, Yu-Hua Xin, Qing Liu
    BMC Microbiology.2025;[Epub]     CrossRef
  • Isoptericola rhizosphaerae sp. nov. and Isoptericola aurantiacus sp. nov. two novel bacteria isolated from rhizosphere soil
    Haifei Liu, Quan Yang, Jiawei Li, Fei Yang, Caifei Li, Ding Li, Ying Sun, Lifang Yang, Mingguo Jiang
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • A new nodule-associated bacterium, Cupriavidus consociatus sp. nov. Isolated from the root nodules of Leucaena sp. and Arachis sp. growing in a cacao field in Chiapas, Mexico
    Erika-Yanet Tapia-García, Belén Chávez-Ramírez, Violeta Larios-Serrato, Ivan Arroyo-Herrera, J. Antonio Ibarra, Paulina Estrada-de los Santos, Ying Ma
    PLOS One.2025; 20(5): e0324390.     CrossRef
  • Lacticaseibacillus suihuaensis sp. nov., Isolated from Traditional Chinese Pickle
    Xin-Yu Zhu, Chun Yan Li, Hao Wang, Chun Tao Gu
    Current Microbiology.2025;[Epub]     CrossRef
  • Isolation and characterization of Fibrella aquatica sp. nov. from freshwater, Fibrella musci sp. nov. from moss on soil and Fibrella arboris sp. nov. from moss on a tree
    Chunghwan Baek, Inhyup Kim, Sunho Park, Haejin Woo, Hyunji Lee, Subin Yook, Seunghui Kwak, Jisu Kim, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Coriander borne Salmonella superbug: genomic assessments of chromosomal and plasmid-associated resistance, virulence and MGEs of XDR Salmonella enterica Typhi NH1
    Noor Ul Huda, Khwaja Ali Hasan, Faizan Saleem, Shahida Naz, Saeed Khan, Zulfiqar Ali Mirani, Muhammad Noman Syed, Amal S. Alswat, Muhammad Sohail
    Pathogens and Global Health.2025; 119(5-6): 210.     CrossRef
  • Characterization of known and novel clinically important antibiotic resistance genes and novel microbes from wastewater-impacted high Arctic fjord sediments
    Manish P. Victor, Lise Øvreås, Nachiket P. Marathe
    Science of The Total Environment.2025; 985: 179699.     CrossRef
  • Isolation and characterization of Polaribacter sargassicola sp. nov. and Algibacter ulvanivorans sp. nov.: two novel species with ability to degrade algal polysaccharides
    Jin Li, Aihua Mao, Chao Peng, Linhui Li, Binghan Li, Lijuan Zhou, Yan Xu, Mingqi Zhong, Zhong Hu
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Emergence of a dual-threat ST1322 clinical Isolate: Hypervirulent and carbapenem-resistant Klebsiella pneumoniae revealed by genomic and virulence analysis
    Tianyao Liu, Xinyi Chen, Zhiyun Hao, Min Wang
    Biochemical and Biophysical Research Communications.2025; 779: 152425.     CrossRef
  • Genomic insights into Neopusillimonas aestuarii sp. nov., a novel estuarine bacterium with adaptations for ectoine biosynthesis and stress tolerance
    Kiran Kirdat, Umera Patwekar, Kunal Jain, Malad Mubarak, Pradeep Choudhary, Lucky Thakkar, Vipool Thorat, Datta Madamwar, Tushar Lodha, Amit Yadav
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Robertkochia aurantiaca sp. nov., and Robertkochia flava sp. nov., two potential quinate- and catechol-degrading bacteria isolated from tidal-flat sediments
    Jaincy N. Jayan, Young-Mi Lee, Ye-ji You, Sathiyaraj Srinivasan, Sang-Seob Lee
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Genomic insights into novel predatory myxobacteria isolated from human feces
    Joyasree Das, Shilpee Pal, Anu Negi, Shiva S. Sundharam, Amit Yadav, Srikrishna Subramanian, S. K. Sinha, Jayanta Samanta, Srinivasan Krishnamurthi, Jan Claesen
    Microbiology Spectrum.2025;[Epub]     CrossRef
  • Flavobacterium mekongense sp. nov., isolated from the Mekong River in Thailand
    Chitwadee Phithakrotchanakoon, Supattra Kitikhun, Paopit Siriarchawatana, Piyanat Charoenyingcharoen, Sukanya Jeennor, Thanyakorn Nilsakha, Amonwan Chanpet, Thanat Vorajinda, Sermsiri Mayteeworakoon, Pattaraporn Yukphan, Supawadee Ingsriswang
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Familial Reclassification Within Order Lysobacterales and Proposal of Four Novel Species
    Tengfei Ma, Haijiao Liu, Yafei Chen, Juan Liu, Chungen Piao, Han Xue, Risheng Xu, Yong Li
    Microorganisms.2025; 13(6): 1212.     CrossRef
  • Comparative genome analyses reveal insights into the marine adaptation of a novel bacterium Pontimicrobium maritimus sp. nov., isolated from seawater
    Neak Muhammad, Tien Q. Vuong, Ho Le Han, Song-Gun Kim
    Scientific Reports.2025;[Epub]     CrossRef
  • Lacticaseibacillus salsurae sp. nov. and Levilactobacillus muriae sp. nov., isolated from traditional Chinese pickle
    Si-Tong Song, Ting-Yu Wang, Xin-Yu Zhu, Chun Tao Gu
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Genome analysis reveals diverse novel psychrotolerant Mucilaginibacter species in Arctic tundra soils
    Anil Kumar, Minna K Männistö, Marika Pätsi, Lee J Kerkhof, Max M Häggblom
    ISME Communications.2025;[Epub]     CrossRef
  • Chryseobacterium cupriresistens sp. nov., a copper-resistant bacterium isolated from soil contaminated with heavy metals in Chapala Basin, Mexico
    Ivan Arroyo-Herrera, Ana Laura Reséndiz-Martínez, Brenda Román-Ponce, Joseph Guevara-Luna, Xiaoxia Zhang, Ayixon Sánchez-Reyes, Paulina Estrada-de los Santos, En Tao Wang, María Soledad Vásquez-Murrieta
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Cellvibrio chitinivorans sp. nov., a chitinolytic bacterium isolated from an intertidal mudflat
    Yanzhe Xin, Xing Qin, Honghai Zhang, Tao Dong, Xiaolu Wang, Yaru Wang, Yuan Wang, Tao Tu, Huoqing Huang, Bin Yao, Huiying Luo
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • A virulent phage vB_VpaP_R28Z infecting Vibrio parahaemolyticus with potential for therapeutic application
    Huiying Zhong, Wenjie Huang, Kate Ting Lin, Qian Zhang, Yuchan Deng, Rui Zhang, Ruijie Ma
    BMC Microbiology.2025;[Epub]     CrossRef
  • Curtobacterium phyllosphaerae sp. nov. and Curtobacterium guangdongense sp. nov., isolated from the citrus phyllosphere
    Songzhen Yang, Jiali Li, Xiang Rong, Qingying Chen, Xueying Lu, Jun Zhang, Ming-Rong Deng, Honghui Zhu, Guang-Da Feng
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Genomic insights and biotechnological potential of “Mesobacillus aurantius” strain S13: A canthaxanthin pigment-producing bacterium
    Shankar Karthik, Gurusamy Raman, Arumugam Srinivasan, Syed Gulam Dastager, Vasudev Wagh, Niraikulam Ayyadurai
    Gene Reports.2025; 40: 102287.     CrossRef
  • Ovoidimarina sediminis gen. nov., sp. nov., a novel member of the Roseobacteraceae isolated from tidal flat sediment
    Akila Kathiresan, Jaincy N. Jayan, Hee-Su Kim, Hyung-Seop Kim, Cong Li, Ke Dong, Sathiyaraj Srinivasan, Sang-Seob Lee
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Characterization of Sulfitobacter sediminivivens sp. nov., A Novel Halotolerant, Nitrogen-Assimilating Bacterium from Tidal Flat Sediment
    Akila Kathiresan, Hee-Yeon Park, Hyung-Seop Kim, Cong Li, Ke Dong, Sathiyaraj Srinivasan, Sang-Seob Lee
    Current Microbiology.2025;[Epub]     CrossRef
  • Roseovarius halophilus sp. nov., Roseovarius salis sp. nov. and Roseovarius salincola sp. nov., three novel species of the genus Roseovarius from different saline lakes
    Dildar Wu, Hao-Ran Guo, Lei Gao, Qing-Yu Xu, Tayyiba Habib, Rashidin Abdugheni, Bao-Zhu Fang, Yong-Hong Liu, Wen-Sheng Shu, Xin Li, Wen-Jun Li
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Alicycliphilus soli sp. nov., Isolated from a Plastic Film Greenhouse Soil and the Proposal for the Reclassification of Diaphorobacter limosus as Alicycliphilus limosus comb. nov.
    Xinyu Liu, Hailong Liang, Yingying Liu, Huijun Zhang, Hui Han, Bingyue Xin, Xiaomin Wu, Feng Li, Man Song, Long Zhang
    Current Microbiology.2025;[Epub]     CrossRef
  • Genome Mining of Chromobacterium Genus Reveals a Class of Nonribosomal Lipopeptides with Potent Antifungal Activity
    Qinghong Meng, Yutian Guan, Jinghai Wang, Xingyan Wang, Xiangmei Ren, Haiyan Sui, Bin Wei, Xiaoying Bian
    Journal of Agricultural and Food Chemistry.2025; 73(35): 21920.     CrossRef
  • Microbacterium xanthum sp. nov. Isolated from Seaweed, with the Reclassification of Microbacterium ihumii Yacouba et al. 2023 as a Later Heterotypic Synonym of Microbacterium tenebrionis Lee and Kim 2023
    Soon Dong Lee, Hong Lim Yang, In Seop Kim
    Current Microbiology.2025;[Epub]     CrossRef
  • Guyparkeria halopsychrophila sp. nov., a chemolithoautotrophic polyextremophile isolated from a sub-zero Arctic hypersaline spring
    Matthew W. Quinn, Olivia Blenner-Hassett, Scott Sugden, Lochlan Breckenridge, Lyle G. Whyte
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Comparative genomics of Clostridium butyricum reveals a conserved genome architecture and novel virulence-related gene clusters
    Orlagh H. Anderson, James P. J. Chong, Gavin H. Thomas
    Microbial Genomics .2025;[Epub]     CrossRef
  • Cedecea selenatireducens sp. nov. and Rahnella selenatireducens sp. nov., isolated from the seleniferous soil
    Sasa Zhang, Yi Liu, Haoyang Wang, Jing Peng, Kui Li, Ziwei Jiao, Yanbin Guo
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Methylobacterium alsaeris sp. nov. and Methylobacterium carpenticola sp. nov., isolated from a car air conditioning system
    Jung Pyo Yoon, Tae Hun Kim, So Yoon Park, Ki Young Yoon, Hyung Min Kim
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Emerging probiotics: future therapeutics for human gut health
    Sylvia H Duncan, Carlos Sabater
    FEMS Microbiology Ecology.2025;[Epub]     CrossRef
  • Taxonomic Characterization and Genome Analysis of Polaribacter gochangensis sp. nov., Isolated From a Tidal Clam Farm
    Akila Kathiresan, Hyung-Seop Kim, Ke Dong, Sathiyaraj Srinivasan, Sang-Seob Lee
    Current Microbiology.2025;[Epub]     CrossRef
  • Integrated genome mining and molecular networking uncover the biosynthetic potential of a novel mangrove-derived strain Streptomyces sp. B1866
    Liyuan Jiang, Wenjin Hu, Jinling Qin, Baorui Teng, Siwei Chen, Dan Zhang, Hui Lei, XinLi Pan
    BMC Genomics.2025;[Epub]     CrossRef
  • Efficient degradation of cephalexin by newly isolated strain Brevundimonas sp. CEF1 and its biodegradation mechanisms
    Boxiang Kou, Yujia Wang, Yunyun Dong, Tiantian Wang, Zexun Wang, Junheng Wang, Dan Ma, Sijun Dong
    Chemical Engineering Journal.2025; 522: 167124.     CrossRef
  • Pseudarthrobacter raffinosi sp. nov. and Pseudarthrobacter cellobiosi sp. nov. Two Heavy-Metal-Tolerant and Psychrotolerant Bacteria Isolated from Glaciers
    Lei-Lei Yang, Yu-Hua Xin, Qing Liu
    Current Microbiology.2025;[Epub]     CrossRef
  • Description of Silvibacterium acidisoli sp. nov. and Edaphobacter albus sp. nov. and a Proposal for Taxonomic Rearrangements Within the Family Acidobacteriaceae Based on Comparative Genome Analysis
    Lihong Qiu, Lixiang Cao
    Taxonomy.2025; 5(3): 40.     CrossRef
  • Variovorax atrisoli sp. nov., a novel species isolated from black soil applied with herbicide atrazine in Northeast China
    Jianheng Wang, Yuzhu Chen, Yuxi Yang, Yuxin Fan, Charity Offei, Jing Bai, Yanjie Qi, Yucheng Wu, Dongfei Han
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Agromyces endophyticus sp. nov., isolated from endosphere of garlic
    Seunghwan Kim, Jun Heo, Hyorim Choi, Yunhee Choi, Hang-Yeon Weon, Soon-Wo Kwon, Hanako Naito, Tomomi Yamada, Moriyuki Hamada, Yiseul Kim
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Augmenting microbial phylogenomic signal with tailored marker gene sets
    Henry Secaira-Morocho, Xiaofang Jiang, Qiyun Zhu
    Nature Communications.2025;[Epub]     CrossRef
  • Potential application of MALDI-TOF MS to identify Streptococcus parapneumoniae, an emerging pathogen previously misidentified as Streptococcus pneumoniae
    Yan Zhao, Yuanchao Ma, Hwei Huih Lee, Wing Ho Li, Antonio Hung-Yee Ngan, Jonathan Hon-Kwan Chen, Simon Yung-Chun So, Vincent Chi-Chung Cheng, Kwok-Yung Yuen, Man Lung Yeung, Jade Lee-Lee Teng
    International Journal of Infectious Diseases.2025; 160: 108042.     CrossRef
  • Apilactobacillus intestinapis sp. nov., isolated from the honeybee
    Li-Jyun Tsai, Po-Cheng Chen, Wei-Tsu Lan, Yun-Shien Lee, Yu-Chung Chang, Hui-Chung Wu, Chong-You Lin, Yi-Hsien Liu, Jhih-Ti Teng, Yi-Sheng Chen
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Phylogenomic insights support the merger of the genera Mameliella and Maliponia into the genus Antarctobacter
    Xiaokun Xu, Xiuzhen Li, Qingjie Xue, Ang Liu
    BMC Genomics.2025;[Epub]     CrossRef
  • Hymenobacter cheonanensis sp. nov., and Hymenobacter convexus sp. nov. isolated from the construction site
    Ji-yun Son, Sathiyaraj Srinivasan
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Comparative genomics of ‘Xanthomonas cannabis’ reveals an emerging, diverse pathogen
    Daniel J. E. McKnight, Lauren Clackson, Johanna Wong-Bajracharya, John Webster, Paul Worden, Fridtjof Snijders, Efenaide B. Okoh, Steven P. Djordjevic, Toni A. Chapman, Daniel R. Bogema
    Microbial Genomics .2025;[Epub]     CrossRef
  • Isolation of diverse Undibacterium-related strains from alpine lakes and re-examining the taxonomic status of this genus
    Hui-Bin Lu, Ling-Yang Kong, Li Chen, Guang-Jie Chen, Jian-Jun Wang
    Systematic and Applied Microbiology.2025; 48(6): 126661.     CrossRef
  • Genome-based classification of Halonovum salinarum gen. nov., sp. nov., and Halonovum rutilum sp. nov., two novel halophilic archaea isolated from a solar saltern
    Chi Young Hwang, Eui-Sang Cho, Ki-Eun Lee, Eun-Young Lee, Myung-Ji Seo
    BMC Microbiology.2025;[Epub]     CrossRef
  • Enterococcus infantis sp. nov., isolated from the faeces of an infant with atopic dermatitis
    Chin-Kan Chan, Li-Jyun Tsai, Misa Otoguro, Fujitoshi Yanagida, Yun-Shien Lee, Hui-Chung Wu, Yu-Chung Chang, Yi-Sheng Chen
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Reclassification of Rhizobium panacihumi as Endobacterium panacihumi comb. nov. and emended description of the genus Endobacterium
    Esther Menéndez, José David Flores-Félix, Encarna Velázquez, Alvaro Peix
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Description of Sediminicola litoralis sp. nov. isolated from tidal flat sediment and functional genomic analysis of the genus Sediminicola
    Yang Liu, Juan Du, Xiong Xiong, Xuan Lu, Haofang Wu, Shuai Meng, Liangqiu Li, Ming-Rong Deng, Honghui Zhu
    BMC Microbiology.2025;[Epub]     CrossRef
  • Description of Fulverythrobacter ferritrahens gen. nov., sp. nov., a Siderophore-Producing Bacterium Isolated from Poultry Manure Compost and Reclassification of Caenibius fulvus and Altererythrobacter segetis as Fulverythrobacter fulvus Comb. nov. and Cr
    Shih-Yao Lin, Asif Hameed, Tzu-Yu Lin, Chiu-Chung Young
    Current Microbiology.2025;[Epub]     CrossRef
  • Identification of an antifungal lipopeptide from Bacillus amyloliquefaciens HAU3 inhibiting the growth of Fusarium graminearum using preparative chromatography and 2D-NMR
    Yuxuan Liu, Ziyao Shi, Xianhua Wan, Ruolin Wang, Yang Liu, Yujie Gong, Donghua Li, Yanhua Zhang, Hong Li, Guoxi Li, Xiaojun Liu, Xiangli Sun, Xiangtao Kang, Yanbin Wang, Quan Zeng
    Microbiology Spectrum.2025;[Epub]     CrossRef
  • Nocardioides lacus sp. nov., a novel member of the Actinomycetota isolated from a freshwater pond
    Young Ho Nam, Ji Young Jung, Hye Kyeong Kang, Byung-Gon Ryu, Ye-Ji Hwang, Tae Jin Kim, Mi-Hwa Lee, Hyun Mi Jin, Kook-Il Han
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Estimated timeline for the evolution of symbiotic nitrogen fixing Paraburkholderia
    Lazarus Mavima, Emma T. Steenkamp, Chrizelle W. Beukes, Marike Palmer, Sofie E. De Meyer, Euan K. James, Stephanus N. Venter, Martin P.A. Coetzee
    Molecular Phylogenetics and Evolution.2025; 213: 108447.     CrossRef
  • Actinomadura opuntiae Sp. Nov., Isolated from a Soil of Cactus and the Reclassification of Actinomadura namibiensis Wink Et Al. 2003 as a Later Heterotypic Synonym of Actinomadura kijaniata Horan and Brodsky 1982
    Soon Dong Lee, Hong Lim Yang, In Seop Kim
    Current Microbiology.2025;[Epub]     CrossRef
  • Comparative Genomics and Phylogenomics of Novel Radiation-Resistant Bacterium Paracoccus qomolangmaensis sp. nov. S3-43T, Showing Pyrethroid Degradation
    Yang Liu, Tuo Chen, Yiyang Zhang, Lu Zhang, Xiaowen Cui, Tian Cheng, Guangxiu Liu, Wei Zhang, Gaosen Zhang
    Microorganisms.2025; 13(11): 2441.     CrossRef
  • Nocardioides epinepheli sp. nov., an Epsilon-Poly-l-lysine-Producing Actinobacterium Isolated from the Fish Intestine
    Jiawei Li, Aolin Zhao, Quan Yang, Haifei Liu, Lifang Yang, Ying Huang, Shujing Wu, Mingguo Jiang
    Current Microbiology.2025;[Epub]     CrossRef
  • Paired genomic and metabolomic analysis reveals the secondary metabolome potential of Cystobacter
    Wen-Chao Yu, Shu-Qi Ge, Jia-Lian Huang, Bin Wei, Qihao Wu, Hong Wang, Yanlei Yu
    Journal of Applied Microbiology.2025;[Epub]     CrossRef
  • Strain-specific qPCR assay to track the vaginal colonization of the probiotic Lacticaseibacillus rhamnosus TOM 22.8 strain orally administered
    Amanda Vaccalluzzo, Alessandra Pino, Georgiana Bosco, Cinzia Caggia, Cinzia Lucia Randazzo
    BMC Microbiology.2025;[Epub]     CrossRef
  • Longitudinal gut microbiota tracking reveals the dynamics of horizontal gene transfer
    Haoran Peng, Sergio Andreu-Sanchez, Angel J. Ruiz-Moreno, Asier Fernández-Pato, Jiafei Wu, Ranko Gacesa, Alexandra Zhernakova, Daoming Wang, Jingyuan Fu
    Nature Communications.2025;[Epub]     CrossRef
  • Streptococcus atopica sp. nov., Isolated from the Feces of a Toddler with Atopic Dermatitis
    Chin-Kan Chan, Hui-Shan Wu, Li-Jyun Tsai, Yun-Shien Lee, Yu-Chung Chang, Hui-Chung Wu, Yi-Sheng Chen
    Current Microbiology.2025;[Epub]     CrossRef
  • Caballeronia eucalypticola sp. nov., isolated from the xylem tissues of eucalyptus
    Wenkai Xu, Yong Li, Han Xue, Huiping Li
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Acid tolerance and metabolic potential of comammox and nitrite-oxidizing Nitrospira enriched from soil
    Yu Takahashi, Hirotsugu Fujitani, Itsuki Taniguchi, Yasuhiro Gotoh, Yuta Shimada, Shuto Ikeda, Tetsuya Hayashi, Kanako Tago, Masahito Hayatsu, Satoshi Tsuneda
    ISME Communications.2025;[Epub]     CrossRef
  • Prevalence, diversity, and parasitism of tailed prophages in Vibrio harveyi
    Ruijie Ma, Huiying Zhong, Rui Zhang, Michael J. Imperiale
    mSphere.2025;[Epub]     CrossRef
  • Pantoea phosphatilytica sp. nov. and Pantoea phyllosphaerae sp. nov., two phosphate-solubilizing and siderophore-producing bacteria isolated from citrus phyllosphere
    Songzhen Yang, Jiali Li, Jun Zhang, Haoxiang Luo, Honghong Dong, Ming-Rong Deng, Honghui Zhu, Guang-Da Feng
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Description of high-altitude, cold-adaptive, metabolically versatile Dyadobacter aurulentus sp. nov. isolated from Western Himalayan farmland soils
    Amit Yadav, Kiran Kirdat, Vipool Thorat, Ngangyola Tuikhar, Kirti Chundawat, Tushar Lodha, Bhavesh Tiwarekar, Umera Patwekar, Malad Mubarak, Shuchi Shastri, Saurabh Kumar, Yogesh Shouche, Reeta Goel, Rup Lal
    Microbiology Spectrum.2025;[Epub]     CrossRef
  • First Report of Bacterial Fruit Rot of Banana Caused by Dickeya fangzhongdai in China
    X. T. Liu, C. Ma, Y. M. Zhu, E. X. Zhou
    Plant Disease.2025;[Epub]     CrossRef
  • Flavobacterium movens sp. nov. and Flavobacterium mesophilum sp. nov., two novel bacteria isolated from rhizosphere soil of Litchi (Litchi chinensis Sonn.)
    Yijie Dong, Xing Wang, Yang Liu, Guang-Da Feng, Qing Yao, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Metagenomic Insights Into the Ecology, Taxonomy and Metabolic Capabilities of ‘Candidatus Darwinibacteriales’ Ord. Nov. (Formerly MBA03), a Potential Key Player in Anaerobic Digestion
    Roser Puchol‐Royo, Javier Pascual, Asier Ortega‐Legarreta, Pascal Otto, Jeroen Tideman, Sjoerd‐Jan de Vries, Christian Abendroth, Kristie Tanner, Manuel Porcar, Adriel Latorre‐Perez
    Microbial Biotechnology.2025;[Epub]     CrossRef
  • Microbacterium insectihabitans sp. nov., Isolated from Larvae of Allomyrina dichotoma
    Soon Dong Lee, Hong Lim Yang, In Seop Kim
    Current Microbiology.2025;[Epub]     CrossRef
  • Foliimonas ilicis gen. nov., sp. nov., a carbon monoxide-oxidizing bacterium belonging to a novel genus of the family Phyllobacteriaceae isolated from leaves of Ilex aquifolium
    Sinchan Banerjee, András Táncsics, Zeqin Wu, Tudor Stafioiu, Jiacheng Gao, Erika Tóth, Erzsébet Baka, Gary Bending, Hendrik Schäfer
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Diverse biofilm-forming Sphingomonadaceae represent twelve novel species isolated from glaciers on the Tibetan Plateau
    Dou Han, Yu-Hua Xin, Qing Liu
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Niabella insulamsoli sp. nov., Isolated From Soil and Showing Potential Cosmetic Functions with Flexirubin Extract
    Nhi Thi Ai Nguyen, Jaisoo Kim
    Current Microbiology.2025;[Epub]     CrossRef
  • Aquibaculum arenosum gen. nov., sp. nov., a novel member of the family Rhodovibrionaceae, isolated from sea sand
    Soyeon Ahn, David Hyung-Sun Choi, Veeraya Weerawongwiwat, Jong-Hwa Kim, Ampaitip Sukhoom, Wonyong Kim
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • The analysis of complete genome sequence and comparative genomics of Vibrio parahaemolyticus LF1113 in Hainan
    Linlin Hu, Aiyun Meng, Zhigang Tu, Shuwen Jia, Qingming Liu, Fuxiao Chen
    Infection, Genetics and Evolution.2024; 119: 105574.     CrossRef
  • Organic matter degradation in the deep, sulfidic waters of the Black Sea: insights into the ecophysiology of novel anaerobic bacteria
    Subhash Yadav, Michel Koenen, Nicole J. Bale, Wietse Reitsma, Julia C. Engelmann, Kremena Stefanova, Jaap S. Sinninghe Damsté, Laura Villanueva
    Microbiome.2024;[Epub]     CrossRef
  • Extremely oligotrophic and complex-carbon-degrading microaerobic bacteria from Arabian Sea oxygen minimum zone sediments
    Jagannath Sarkar, Mahamadul Mondal, Sabyasachi Bhattacharya, Subhajit Dutta, Sumit Chatterjee, Nibendu Mondal, Saran N, Aditya Peketi, Aninda Mazumdar, Wriddhiman Ghosh
    Archives of Microbiology.2024;[Epub]     CrossRef
  • Brooklawnia propionicigenes sp. nov., a facultatively anaerobic, propionate-producing bacterium isolated from a methanogenic reactor treating waste from cattle farms
    Yasumitsu Akita, Atsuko Ueki, Akio Tonouchi, Yoshimichi Sugawara, Sachi Honma, Nobuo Kaku, Katsuji Ueki
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Reclassification of Aestuariicella albida as Pseudomaricurvus albidus comb. nov. and Aestuariicella hydrocarbonica as Pseudomaricurvus hydrocarbonicus comb. nov. Based on Comparative Genomics and Molecular Synapomorphies
    Jake Adolf V. Montecillo, Merell P. Billacura, Maria Distressa G. Billacura
    Current Microbiology.2024;[Epub]     CrossRef
  • Advancements in prokaryotic systematics and the role of Bergey's International Society for Microbial Systematicsin addressing challenges in the meta-data era
    Jian-Yu Jiao, Rashidin Abdugheni, Dao-Feng Zhang, Iftikhar Ahmed, Mukhtiar Ali, Maria Chuvochina, Svetlana N Dedysh, Xiuzhu Dong, Markus Göker, Brian P Hedlund, Philip Hugenholtz, Kamlesh Jangid, Shuang-Jiang Liu, Edward R B Moore, Manik Prabhu Narsing Ra
    National Science Review.2024;[Epub]     CrossRef
  • Terrirubrum flagellatum gen. nov., sp. nov. of Terrirubraceae fam. nov. and Lichenibacterium dinghuense sp. nov. from forest soil and proposal of Rhodoblastaceae fam. nov.
    Xiu-yin Guo, Qiu-mei Zhang, Jia-cheng Fu, Li-hong Qiu
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Shewanella goraebulensis sp. nov., isolated from sea water
    Yong-Suk Lee, Hae-Rin Jeong, Eun-Jung Hwang, Maheshkumar Prakash Patil, Yong Bae Seo, Gun-Do Kim
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Acidovorax benzenivorans sp. nov., a novel aromatic hydrocarbon-degrading bacterium isolated from a xylene-degrading enrichment culture
    Anna Bedics, András Táncsics, Sinchan Banerjee, Erika Tóth, Péter Harkai, Gerda Georgina Gottschall, Károly Bóka, Balázs Kriszt
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Halosquirtibacter laminarini gen. nov., sp. nov. and Halosquirtibacter xylanolyticus sp. nov., marine anaerobic laminarin and xylan degraders in the phylum Bacteroidota
    Tra T. H. Nguyen, Tien Q. Vuong, Ho Le Han, Song-Gun Kim
    Scientific Reports.2024;[Epub]     CrossRef
  • Improving plant salt tolerance through Algoriphagus halophytocola sp. nov., isolated from the halophyte Salicornia europaea
    Yuxin Peng, Dong Hyun Cho, Zalfa Humaira, Yu Lim Park, Ki Hyun Kim, Cha Young Kim, Jiyoung Lee
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • Microbacterium abyssi sp. nov. and Microbacterium limosum sp. nov., two new species of the genus Microbacterium, isolated from deep-sea sediment samples
    Yihan Ding, Xiaorui Ding, Yiting Chen, Shiping Wei, Gaiyun Zhang
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Terrihabitans rhizophilus sp. nov., isolated from the rhizosphere soil of plant in temperate semi-arid steppe
    Runze Bao, Huiling Guo, Yungang Liang, Kai Tang, Fuying Feng, Jianyu Meng
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Fictibacillus fluitans sp. nov., isolated from freshwater pond
    Amit Yadav, Akanksha Maurya, Yash Bhavsar, Ruchi Teware, Agrima Bhatt, Elaine DaCosta, Vipool Thorat, Kiran Kirdat, Syed G. Dastager
    Archives of Microbiology.2024;[Epub]     CrossRef
  • Microbial acidification by N, S, Fe and Mn oxidation as a key mechanism for deterioration of subsea tunnel sprayed concrete
    Sabina Karačić, Carolina Suarez, Per Hagelia, Frank Persson, Oskar Modin, Paula Dalcin Martins, Britt-Marie Wilén
    Scientific Reports.2024;[Epub]     CrossRef
  • Xanthomonas rydalmerensis sp. nov., a non-pathogenic member of Group 1 Xanthomonas
    Daniel J. E. McKnight, Johanna Wong-Bajracharya, Efenaide B. Okoh, Fridtjof Snijders, Fiona Lidbetter, John Webster, Mathew Haughton, Aaron E. Darling, Steven P. Djordjevic, Daniel R. Bogema, Toni A. Chapman
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Adaptation mechanisms of Alcanivorax facilitating its predominance in marine environments
    Zhen Chen, Shizheng Xiang, Yao Lu, Qiliang Lai, Chunming Dong, Jianyang Li, Guizhen Li, Zongze Shao
    Frontiers in Marine Science.2024;[Epub]     CrossRef
  • Genomic Functional Analysis of Novel Radiation-Resistant Species of Knollia sp. nov. S7-12T from the North Slope of Mount Everest
    Xinyue Wang, Yang Liu, Zhiyuan Chen, Kexin Wang, Guangxiu Liu, Tuo Chen, Binglin Zhang
    Microorganisms.2024; 12(9): 1748.     CrossRef
  • Massilia litorea sp. nov., Marinobacter salinisoli sp. nov. and Rhodobacter xanthinilyticus sp. nov., isolated from coastal environments
    Banseok Lee, Donghoon Shin, Juseong Kim, Su-Kyoung Shin, Hana Yi, Min-gyung Baek
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Unveiling unique microbial nitrogen cycling and nitrification driver in coastal Antarctica
    Ping Han, Xiufeng Tang, Hanna Koch, Xiyang Dong, Lijun Hou, Danhe Wang, Qian Zhao, Zhe Li, Min Liu, Sebastian Lücker, Guitao Shi
    Nature Communications.2024;[Epub]     CrossRef
  • Auxin production and plant growth promotion by Microbacterium albopurpureum sp. nov. from the rhizoplane of leafless Chiloschista parishii Seidenf. orchid
    Elena A. Tsavkelova, Elena A. Volynchikova, Natalia V. Potekhina, Konstantin V. Lavrov, Alexander N. Avtukh
    Frontiers in Plant Science.2024;[Epub]     CrossRef
  • Paenibacillus suaedae sp. nov. and Paenibacillus violae sp. nov., isolated from the roots of Suaeda japonica Makino and Viola mandshurica W. Becker with plant growth-promoting potential
    Inhyup Kim, Sunho Park, Yonghee Jung, Haejin Woo, Hyunji Lee, Subin Yook, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Vagococcus jeotgali sp. nov., isolated from cutlassfish jeotgal, a traditional Korean fermented seafood
    Sung-Hong Joe, Ah-In Yang, Bora Kim, Hae-In Joe, Yeongjin Hong, Na-Ri Shin
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Sphingomonas rustica sp. nov. and Sphingomonas agrestis sp. nov., novel carotenoid-producing bacterial species isolated from farm soil
    Hyunji Lee, Inhyup Kim, Sunho Park, Haejin Woo, Subin Yook, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Lapidilactobacillus salsurivasis sp. nov., Secundilactobacillus muriivasis sp. nov., and Streptococcus parasalivarius sp. nov., isolated from Traditional Chinese Pickle
    Ting-Yu Wang, Chun Yan Li, Hao Wang, Chun Tao Gu
    Current Microbiology.2024;[Epub]     CrossRef
  • Unprecedented N 2 O production by nitrate-ammonifying Geobacteraceae with distinctive N 2 O isotopocule signatures
    Zhenxing Xu, Shohei Hattori, Yoko Masuda, Sakae Toyoda, Keisuke Koba, Pei Yu, Naohiro Yoshida, Zong-Jun Du, Keishi Senoo, Derek R. Lovley, Daniel R Bond
    mBio.2024;[Epub]     CrossRef
  • Pseudomonas hefeiensis sp. nov., isolated from the rhizosphere of multiple cash crops in China
    Kaiji Liao, Qiang Li, Jun-Zhou Li, Hai-Lei Wei
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Speluncibacter jeojiensis gen. nov. sp. nov., a novel bacterium of the order Mycobacteriales isolated from a cave and a proposal of Speluncibacteraceae fam. nov.
    Soon Dong Lee, Hong-Lim Yang, Jong-Heon Han, In Seop Kim
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • A rare urinary tract infection of multidrug-resistant Chryseobacterium urinae sp. nov. isolated from a diabetic, non-catheterized patient
    Agrima Bhatt, Sujata Pujari, Shailesh Mantri, Kiran Kirdat, Lucky Thakkar, Reshma Poojary, Sunil Kuyare, Kritika Patil, Amit Yadav
    Archives of Microbiology.2024;[Epub]     CrossRef
  • Roseihalotalea indica gen. nov., sp. nov., a halophilic Bacteroidetes from mesopelagic Southwest Indian Ocean with higher carbohydrate metabolic potential
    Beihan Chen, Mingzhe Zhang, Dan Lin, Jianing Ye, Kai Tang
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Phytopathogenic Curtobacterium flaccumfaciens Strains Circulating on Leguminous Plants, Alternative Hosts and Weeds in Russia
    Anna D. Tokmakova, Rashit I. Tarakanov, Anna A. Lukianova, Peter V. Evseev, Lyubov V. Dorofeeva, Alexander N. Ignatov, Fevzi S.-U. Dzhalilov, Sergei A. Subbotin, Konstantin A. Miroshnikov
    Plants.2024; 13(5): 667.     CrossRef
  • Genomic and functional insights of a mucin foraging Rhodopirellula halodulae sp. nov.
    PK Sreya, Atham Hari Naga Papa Rao, Gandham Suresh, Chintalapati Sasikala, Chintalapati Venkata Ramana
    Systematic and Applied Microbiology.2024; 47(4): 126523.     CrossRef
  • Dyadobacter helix sp. nov. and Dyadobacter linearis sp. nov., from drinking water
    Teresa Lucena, María J. Pujalte, David R. Arahal
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Preliminary comparative genomics analysis among Corynebacterium kroppenstedtii complex necessitates a reassessment of precise species associated with mastitis
    Ying Huang, Ming-Hui Song, Shun-Guang Li, Hong- Yu Shen, Ping-Hua Qu, Dao-Feng Zhang
    Journal of Applied Microbiology.2024;[Epub]     CrossRef
  • Ruicaihuangia caeni gen. nov., sp. nov., a novel taxon within the family Microbacteriaceae isolated from sludge
    Le Liu, Keke Geng, Yu Lv, Qi Zhang, Gang Chen, Dan Cheng, Jiahui Shao, Jian He, Qirong Shen
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Isolation and characterization of two new species, Hymenobacter mellowenesis sp. nov. and Hymenobacter aranciens sp. nov., from soil
    Seonjae Kim, Sathiyaraj Srinivasan, Myung Kyum Kim
    Archives of Microbiology.2024;[Epub]     CrossRef
  • Characteristics of a lipase ArEstA with lytic activity against drug-resistant pathogen from a novel myxobacterium, Archangium lipolyticum sp. nov.
    Yang Zhou, Haixin Chen, Hongxia Jiang, Qing Yao, Honghui Zhu
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • Lineage-specific evolution of Aquibium , a close relative of Mesorhizobium , during habitat adaptation
    Minkyung Kim, Wonjae Kim, Yerim Park, Jaejoon Jung, Woojun Park, Arpita Bose
    Applied and Environmental Microbiology.2024;[Epub]     CrossRef
  • Speciation Features of Ferdinandcohnia quinoae sp. nov to Adapt to the Plant Host
    Zaki Saati-Santamaría, José David Flores-Félix, José M. Igual, Encarna Velázquez, Paula García-Fraile, Eustoquio Martínez-Molina
    Journal of Molecular Evolution.2024; 92(2): 169.     CrossRef
  • Novel microbiota Mesosutterella faecium sp. nov. has a protective effect against inflammatory bowel disease
    Seung Yeob Yu, Byeong Seob Oh, Seoung Woo Ryu, Jeong Eun Bak, Eun Seo Heo, Jeong Chan Moon, Jae-Ho Jeong, Ju Huck Lee
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • Isoptericola haloaureus sp. nov., a dimorphic actinobacterium isolated from mangrove sediments of southeast India, implicating biosaline agricultural significance through nitrogen fixation and salt tolerance genes
    Munisamy Prathaban, Ragothaman Prathiviraj, Mythili Ravichandran, Sharmila Devi Natarajan, Murugesan Sobanaa, S. Hari Krishna Kumar, Varadharaju Chandrasekar, Joseph Selvin
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Isolation and Characterization of Paracoccus maritimus sp. nov., from Intertidal Sediment
    Libo Yu, Guangxin Xu, Shiping Wei, Qiliang Lai, Zongze Shao
    Current Microbiology.2024;[Epub]     CrossRef
  • Gilvirhabdus luticola gen. nov., sp. nov., a mesophilic and halophilic bacterium isolated from tidal flat sediment
    Jaincy N. Jayan, Hee-Su Kim, Sathiyaraj Srinivasan, Hyung-Seop Kim, Jae-Yon Yu, Sang-Seob Lee
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Leuconostoc koreense sp. nov., isolated from kimchi, a fermented vegetable
    Min Ji Lee, Jeong Ui Yun, Sohee Nam, Mi-Ja Jung, Yeon Bee Kim, Yujin Kim, Jisu Lee, Dae Gyu Choi, Dae Seung Lee, Seong Woon Roh, Tae Woong Whon, Che Ok Jeon, Se Hee Lee
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Aerobic anoxygenic phototrophs play important roles in nutrient cycling within cyanobacterial Microcystis bloom microbiomes
    Haiyuan Cai, Christopher J. McLimans, Helong Jiang, Feng Chen, Lee R. Krumholz, K. David Hambright
    Microbiome.2024;[Epub]     CrossRef
  • Arthrobacter horti sp. nov., isolated from mountain soil
    Mingyeong Park, Jaisoo Kim
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Sphingomicrobium clamense sp. nov., Isolated from Sediment of Clam Island Beach in China
    Xing Li, Lulu Mu, Yanfeng Zhang, Zimu Zhu, Yazhong Xiao, Zemin Fang
    Current Microbiology.2024;[Epub]     CrossRef
  • Pseudomonas fortuita sp. nov., isolated from the endosphere of a wild yam
    Aurelien Carlier, Marine Beaumel, Sandra Moreau, Tessa Acar, Thibault Géry Sana, Margo Cnockaert, Peter Vandamme
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Azospirillum isscasi sp. nov., a bacterium isolated from rhizosphere soil of rice
    Hui Wang, Haiyang Jin, Zhe Chen, Wenjun Li, Jing Ma, Tianlong Hu, Qi Liu, Yanhui Zhang, Xingwu Lin, Zubin Xie
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Genome Mining Analysis Uncovers the Previously Unknown Biosynthetic Capacity for Secondary Metabolites in Verrucomicrobia
    Xue Di, Peng Li, Jingxuan Wang, Vincent Nowak, Shuai Zhi, Meiling Jin, Liwei Liu, Shan He
    Marine Biotechnology.2024; 26(6): 1324.     CrossRef
  • Metabolic and phylogenetic diversity in the phylum Nitrospinota revealed by comparative genome analyses
    Linnea F M Kop, Hanna Koch, Mike S M Jetten, Holger Daims, Sebastian Lücker
    ISME Communications.2024;[Epub]     CrossRef
  • Key bacteria decomposing animal and plant detritus in deep sea revealed via long-term in situ incubation in different oceanic areas
    Jianyang Li, Chunming Dong, Shizheng Xiang, Huiyang Wei, Qiliang Lai, Guangshan Wei, Linfeng Gong, Zhaobin Huang, Donghui Zhou, Guangyi Wang, Zongze Shao
    ISME Communications.2024;[Epub]     CrossRef
  • Xiashengella succiniciproducens gen. nov., sp. nov., a succinate-producing bacterium isolated from an anaerobic digestion tank in the family Marinilabiliaceae of the order Bacteroidales
    Hao-Jie Huang, Xi Zhang, Xin-Wei Sun, Biao Chen, Xiu-Tong Li, Nan Zhou, Rashidin Abdugheni, Qiu-Yin Cheng, Tie-Jun Zhang, Yao Liu, Yong Jiang, Ye Deng, Shuang-Jiang Liu, Cheng-Ying Jiang
    Archives of Microbiology.2024;[Epub]     CrossRef
  • Comparative genome analysis of the genus Marivirga and proposal of two novel marine species: Marivirga arenosa sp. nov., and Marivirga salinae sp. nov.
    Neak Muhammad, Forbes Avila, Song-Gun Kim
    BMC Microbiology.2024;[Epub]     CrossRef
  • Lacticaseibacillus pabuli sp. nov., isolated from fermented cattle feed
    Hyorim Choi, Yiseul Kim, Seunghwan Kim, Soon-Wo Kwon, Daseul Lee, Byeong-Hak Han, Seung-Beom Hong, Hanako Naito, Tomomi Yamada, Moriyuki Hamada, Jun Heo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Resolving the metabolism of monolignols and other lignin-related aromatic compounds in Xanthomonas citri
    Damaris B. Martim, Anna J. V. C. Brilhante, Augusto R. Lima, Douglas A. A. Paixão, Joaquim Martins-Junior, Fernanda M. Kashiwagi, Lucia D. Wolf, Mariany S. Costa, Fabrícia F. Menezes, Rafaela Prata, Matheus C. Gazolla, Juliana A. Aricetti, Gabriela F. Per
    Nature Communications.2024;[Epub]     CrossRef
  • Pedobacter rhodius sp. nov. and Pedobacter punctiformis sp. nov., isolated from soil
    Haejin Woo, Geeta Chhetri, Inhyup Kim, Yoonseop So, Sunho Park, Yonghee Jung, Taegun Seo
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • A comparative genomic study of a hydrocarbon-degrading marine bacterial consortium
    Jorge Rojas-Vargas, Eria A. Rebollar, Alejandro Sanchez-Flores, Liliana Pardo-López, Pankaj Kumar Arora
    PLOS ONE.2024; 19(8): e0303363.     CrossRef
  • Gemmobacter denitrificans sp. nov., a denitrifying bacterium, isolated from pond water for Litopenaeus vannamei
    Mingxia Zhang, Yulian Zhang, Fan Yang, Qing Yao, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Janibacter alittae sp. nov., an actinobacterium isolated from the gut of marine sandworm (Alitta virens)
    Bora Kim, Min Ok Jun, Ah-In Yang, Sung-Hong Joe, Hae-In Joe, Hojun Sung, Ki Hyun Kim, Hyun Jung Kim, Na-Ri Shin
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Sporosarcina jeotgali sp. nov., Sporosarcina oncorhynchi sp. nov., and Sporosarcina trichiuri sp. nov., Isolated from Jeotgal, a Traditional Korean Fermented Seafood
    Ah-In Yang, Bora Kim, Sung-Hong Joe, Hae-In Joe, Hanna Choe, Ki Hyun Kim, Min Ok Jun, Na-Ri Shin
    Journal of Microbiology.2024; 62(4): 285.     CrossRef
  • Characterization of Bacillus velezensis TJS119 and its biocontrol potential against insect pathogens
    Kook-Il Han, Young Ho Nam, Byung Su Hwang, Jeong Tae Kim, Jum Oc Jung, Eunsun Kim, Mi-Hwa Lee
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • Altererythrobacter litoralis sp. nov., a New Carotenoid-Producing Member of the Family Erythrobacteraceae, Isolated from a Tidal Flat Sediment
    Yang Liu, Tao Pei, Juan Du, Mingxia Zhang, Honghui Zhu
    Current Microbiology.2024;[Epub]     CrossRef
  • Pengzhenrongella frigida sp. nov., isolated from a glacier
    Qing Liu, Lei-Lei Yang, Yu-Hua Xin
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Isolation and identification of uric acid-dependent Aciduricibacillus chroicocephali gen. nov., sp. nov. from seagull feces and implications for hyperuricemia treatment
    Wenxuan Liu, Fulong Nan, Fengjun Liu, Xiaoli Yang, Zonghui Li, Shasha Jiang, Xianjuan Zhang, Jun Li, Meng Yu, Yunyang Wang, Bin Wang, Vincent B. Young
    mSphere.2024;[Epub]     CrossRef
  • Ciceribacter sichuanensis sp. nov., a plant growth promoting rhizobacterium isolated from root nodules of soybean in Sichuan, China
    Yanqin Zhang, Yuanxue Chen, Petri Penttinen, Xing Wang, Ying Quan, Licheng Wen, Miao Yang, Xiaoping Zhang, Qiang Chen, Lingzi Zhang, Junjie Zhang, Xiaoxia Zhang, Kaiwei Xu
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Clostridium lapidicellarium sp. nov. and Clostridium moutaii sp. nov., two species isolated from fermentation cellar-producing sauce-flavour Chinese baijiu
    Fan Yang, Hui Wang, Liang-Qiang Chen, Nan Zhou, Jian-Jun Lu, Xiu-Xin Pu, Bo Wan, Li Wang, Shuang-Jiang Liu
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Paracoccus actinidiae sp.nov., a novel bacterium isolated from kiwi tree rhizosphere soil
    Chenqi Xu, Han Peng, He Li, Xinran Xie, Siwei Chen, Junhao Dai, Hong Ren
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • The Type Strain of Bifidobacterium indicum Scardovi and Trovatelli 1969 (Approved Lists 1980) is ATCC 25912, not DSM 20214, and Rejection to Reclassify Bifidobacterium coryneforme as Bifidobacterium indicum
    Cheng-Shan Jiang, Chun Yan Li, Chun Tao Gu
    Current Microbiology.2024;[Epub]     CrossRef
  • Actinomadura monticuli sp. nov., isolated from Darangshi Oreum (a volcanic cone), and the reclassification of Actinomadura glauciflava Lu et al. 2003 as a later heterotypic synonym of Actinomadura luteofluorescens (Shinobu 1962) Preobrazhensk
    Soon Dong Lee, Hong Lim Yang, In Seop Kim
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Streptococcus taoyuanensis sp. nov., a Novel Species Isolated from a Patient with Bacteremia
    Chien-Yu Lee, Chin-Kan Chan, Yi-Sheng Chen, Yun-Shien Lee, Shih-Ting Lin, Yu-Chung Chang, Hui-Chung Wu, Jia-rong Zhang, Hong-yu Chen, Li-Ting Wang
    Current Microbiology.2024;[Epub]     CrossRef
  • Difference in gut microbial dysbiotic patterns between body-first and brain-first Parkinson's disease
    Don Gueu Park, Woorim Kang, In-Ja Shin, Mauricio Chalita, Hyun-Seok Oh, Dong-Wook Hyun, Hyun Kim, Jongsik Chun, Young-Sil An, Eun Jeong Lee, Jung Han Yoon
    Neurobiology of Disease.2024; 201: 106655.     CrossRef
  • Acidithiobacillus acidisediminis sp. nov., an acidophilic sulphur-oxidizing chemolithotroph isolated from acid mine drainage sediment
    Xiu-Tong Li, Zong-Lin Liang, Ye Huang, Zhen Jiang, Zhen-Ni Yang, Nan Zhou, Ying Liu, Shuang-Jiang Liu, Cheng-Ying Jiang
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Sphingomonas Immobilis sp. nov., and Sphingomonas natans sp. nov. bacteria isolated from soil
    Inyoung Choi, Sathiyaraj Srinivasan, Myung Kyum Kim
    Archives of Microbiology.2024;[Epub]     CrossRef
  • Roseateles agri sp. nov., a New Species Isolated from Fresh Soil in Uiwang, South Korea
    Yelim You, Jaisoo Kim
    Diversity.2024; 16(5): 279.     CrossRef
  • Description of Roseibium sediminicola sp. nov. Isolated from Sediment of a Tidal Flat on the Yellow Sea Coast
    Soyeon Ahn, Veeraya Weerawongwiwat, Yunjeong Lee, David Hyung-Sun Choi, Jong-Hwa Kim, Jung-Hoon Yoon, Jung-Sook Lee, Ampaitip Sukhoom, Wonyong Kim
    Current Microbiology.2024;[Epub]     CrossRef
  • Chemolithoautotrophic diazotrophs dominate dark nitrogen fixation in mangrove sediments
    Shasha Wang, Lijing Jiang, Zhuoming Zhao, Zhen Chen, Jun Wang, Karine Alain, Liang Cui, Yangsheng Zhong, Yongyi Peng, Qiliang Lai, Xiyang Dong, Zongze Shao
    The ISME Journal.2024;[Epub]     CrossRef
  • Fontisubflavum oceani gen. nov., sp. nov., isolated from the deep-sea cold seep water of South China Sea
    Xiu-dan Xu, Dan-dan Zhou, Bin-zhe Zhang, Jian Zhang
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Paenibacillus glufosinatiresistens sp. nov., a glufosinate-resistant bacterium isolated from sludge
    Yan Wu, Yuwen Yang, Minglai Wan, Le Chen, Ye Yuan, Jian He, Baolong Zhang
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Erythrobacter oryzae sp. nov., isolated from rice paddy soil
    Hyo-Jin Lee, Ji-Soo Hwang, Eun-kyung Lee, Kyung-Sook Whang
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • SeqCode facilitates naming of South African rhizobia left in limbo
    Melandré van Lill, Stephanus N. Venter, Esther K. Muema, Marike Palmer, Wai Y. Chan, Chrizelle W. Beukes, Emma T. Steenkamp
    Systematic and Applied Microbiology.2024; 47(2-3): 126504.     CrossRef
  • A Novel Strain Burkholderia theae GS2Y Exhibits Strong Biocontrol Potential Against Fungal Diseases in Tea Plants (Camellia sinensis)
    Yijie Dong, Xing Wang, Guang-Da Feng, Qing Yao, Honghui Zhu
    Cells.2024; 13(21): 1768.     CrossRef
  • Clostridium omnivorum sp. nov., isolated from anoxic soil under the treatment of reductive soil disinfestation
    Atsuko Ueki, Akio Tonouchi, Nobuo Kaku, Sachi Honma, Katsuji Ueki
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Alkalimonas mucilaginosa sp. nov. and Alkalimonas cellulosilytica sp. nov. isolated from alkaline Lonar lake, India
    Sonia Thite, Devika Godbole, Mahima Debnath, Agrima Bhatt, Amit Yadav, Tushar Lodha, Neetha Joseph, Kiran Kirdat, Dibyajyoti Boruah, Roohani Sharma, Amaraja Joshi
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Genome-based taxonomic classification of the genus Sulfitobacter along with the proposal of a new genus Parasulfitobacter gen. nov. and exploring the gene clusters associated with sulfur oxidation
    Xiaokun Xu, Mengdan He, Qingjie Xue, Xiuzhen Li, Ang Liu
    BMC Genomics.2024;[Epub]     CrossRef
  • Aurantiacibacter flavus sp. nov. and Aurantiacibacter gilvus sp. nov., isolated from the mudflat of Suaeda japonica colonies
    Sunho Park, Inhyup Kim, Haejin Woo, Hyunji Lee, Subin Yook, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Ochrobactrum chromiisoli sp. nov., Isolated from Chromium-Contaminated Soil
    Yi Yang, Zhe Xu, Li Yang, Meng-yao Hu, Guang-yang Jiang, Jia Chen, Yi-chen Yang, Yongqiang Tian
    Current Microbiology.2024;[Epub]     CrossRef
  • Thiosulfate oxidation and autotrophy potential by marine prevalent heterotrophic bacteria of genus Marinobacter
    Fei Xu, Xiang Zeng, Yadong Gong, Zongze Shao
    Acta Oceanologica Sinica.2024; 43(8): 89.     CrossRef
  • Lacticaseibacillus parahuelsenbergensis sp. nov., Lacticaseibacillus styriensis sp. nov. and Lacticaseibacillus zeae subsp. silagei subsp. nov., isolated from different grass and corn silage
    Monika Grabner F., Monika Grabner H., Hermine Schein, Andrea Schrank, Manuela Töglhofer, Elisabeth Weidenholzer, Christian Rückert-Reed, Tobias Busche, Marlene Buchebner-Jance
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Draft genome sequence of 'Candidatus Phytoplasma asteris,’ strain SW86 associated with sandal spike disease (SSD)
    Kiran Kirdat, Bhavesh Tiwarekar, K. N. Manjula, S. Padma, Shivaji Sathe, R. Sundararaj, Amit Yadav
    3 Biotech.2024;[Epub]     CrossRef
  • Cold-adapted Exiguobacterium sibiricum K1 as a potential bioinoculant in cold regions: Physiological and genomic elucidation of biocontrol and plant growth promotion
    Sareeka Kumari, Anil Kumar, Ayush Lepcha, Rakshak Kumar
    Gene.2024; 916: 148439.     CrossRef
  • EcoGenoRisk: Developing a computational ecological risk assessment tool for synthetic biology
    Anna Ulanova, Cresten Mansfeldt
    Environmental Pollution.2024; 346: 123647.     CrossRef
  • Description of Aliirhizobium terrae sp. nov., A Plant Growth-Promoting Bacterium Isolated from a Maize-Rice Rotation Agriculture Field
    Shih-Yao Lin, Tzu-Yu Lin, Asif Hameed, Chia-Fang Tsai, Chiu-Chung Young
    Current Microbiology.2024;[Epub]     CrossRef
  • Novel oceanic cyanobacterium isolated from Bangaram island with profound acid neutralizing ability is proposed as Leptolyngbya iicbica sp. nov. strain LK
    Subhajeet Dutta, Shreya Kothari, Deeksha Singh, Samrat Ghosh, Aditya Narayan Sarangi, Smruti Sanjita Behera, Satish Prajapati, Prasanta Kumar Sinha, Asharani Prusty, Sucheta Tripathy
    Molecular Phylogenetics and Evolution.2024; 197: 108092.     CrossRef
  • Sulfide Toxicity as Key Control on Anaerobic Oxidation of Methane in Eutrophic Coastal Sediments
    Paula Dalcin Martins, João P. R. C. de Monlevad, Maider J. Echeveste Medrano, Wytze Klaas Lenstra, Anna Julia Wallenius, Martijn Hermans, Caroline P. Slomp, Cornelia Ulrike Welte, Mike S. M. Jetten, Niels A. G. M. van Helmond
    Environmental Science & Technology.2024; 58(26): 11421.     CrossRef
  • Phylogeny and genomic analysis of Shewanella cutis sp. nov., isolated from freshwater pufferfish
    Lipika Das, Ritu Rani Archana Kujur, Tanmoy Debnath, Subrata K. Das
    Folia Microbiologica.2024; 69(4): 723.     CrossRef
  • Aequorivita flava sp. nov., isolated from deep-sea sediments
    Xiangwei Chen, Jinmei Xia, Xiaoteng Fu, Qiliang Lai, Jianning Wang, Yaping Du, Xiupian Liu, Guangyu Li, Xixiang Tang, Zongze Shao
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Paraflavitalea pollutisoli sp. nov., Pollutibacter soli gen. nov. sp. nov., Polluticoccus soli gen. nov. sp. nov., and Terrimonas pollutisoli sp. nov., four new members of the family Chitinophagaceae from polluted soil
    Ze-Shen Liu, Xiao-Kang Wang, Ke-Huan Wang, Mei-Ling Yang, De-Feng Li, Shuang-Jiang Liu
    Systematic and Applied Microbiology.2024; 47(2-3): 126503.     CrossRef
  • Sinomonas terricola sp. nov., a plant-beneficial bacterium isolated from litchi rhizosphere soil in Guangdong, China
    Jiaxin Wan, Yang Zhou, Hui Sun, Huaping Li, Qing Yao, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Genetic and phenotypic diversity of Flavobacterium psychrophilum isolates from Czech salmonid fish farms
    Vera Vaibarova, Stanislava Kralova, Miroslava Palikova, Jana Schwarzerova, Julie Nejezchlebova, Darina Cejkova, Alois Cizek
    BMC Microbiology.2024;[Epub]     CrossRef
  • Citrobacter enshiensis sp. nov., isolated from seleniferous soil
    Sasa Zhang, Kui Li, Jing Peng, Haoyang Wang, Jiayin Sun, Yanbin Guo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Distinct genome trichotomy in members of Hapalosiphonaceae is guided by habitat adaptation with Mastigocladus laminosus UU774 as a case study
    Aribam Geeta, Mayuri Mukherjee, Bornita Das, Subhajeet Dutta, Asharani Prusty, Samrat Ghosh, Anashuya Biswas Raha, Mousumi Poddar Sarkar, Sucheta Tripathy
    Algal Research.2024; 82: 103603.     CrossRef
  • Microbacterium aquilitoris sp. nov. and Microbacterium gwkjiense sp. nov., isolated from beach
    Soon Dong Lee, Hong Lim Yang, Ji-Sun Kim, In Seop Kim
    Archives of Microbiology.2024;[Epub]     CrossRef
  • Microvirga sesbaniae sp. nov. and Microvirga yunnanensis sp. nov., Pink-Pigmented Bacteria Isolated from Root Nodules of Sesbania cannabina (Retz.) Poir.
    Nan Shi, Teng He, Huifang Qin, Ziye Wang, Shenghao You, Entao Wang, Guoli Hu, Fang Wang, Miao Yu, Xiaoyun Liu, Zhenyu Liu
    Microorganisms.2024; 12(8): 1558.     CrossRef
  • Microbacterium horticulturae sp. nov., a novel actinobacterium isolated from flowerpot soil
    Hyorim Choi, Yunhee Choi, Seunghwan Kim, Yiseul Kim, Hanako Naito, Tomomi Yamada, Moriyuki Hamada, NamJung Kim, Yonghoon Lee, Jun Heo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Comparative genomics of the genus Halioglobus reveals the genetic basis for the reclassification of Halioglobus pacificus as Parahalioglobus pacificus gen. nov. comb. nov
    Jake Adolf V. Montecillo
    International Microbiology.2024; 27(6): 1831.     CrossRef
  • Paraburkholderia largidicola sp. nov., a gut symbiont of the bordered plant bug Physopelta gutta
    Reona Yashima, Yuan Terata, Kaoru Sakamoto, Miho Watanabe, Kazutaka Takeshita
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Sphingomonas longa sp. nov., Sphingomonas mollis sp. nov. and Sphingomonas aurea sp. nov.: three novel Sphingomonas species isolated from soil
    Eo Jin Kim, Soo Hyun Maeng, Myung Kyum Kim
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Genomics of the Thermophilic Bacterium Thermosulfidibacter takaii Reveals Novel Lineage of Deep-Branching Bacterial Phylum
    Jake Adolf V. Montecillo
    Indian Journal of Microbiology.2024; 64(2): 762.     CrossRef
  • Hyalangiumruber sp. nov, characterization of a novel myxobacterium strain s54d21 and their secondary metabolites
    Yi Zang, Xianjiao Zhang, Zhe Wang, Qingyi Tong, Yang Zhou, Qing Yao, Honghui Zhu
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • Achromobacter seleniivolatilans sp. nov. and Buttiauxella selenatireducens sp. nov., isolated from the rhizosphere of selenium hyperaccumulator Cardamine hupingshanesis
    Sasa Zhang, Yi Liu, Hao Wang, Zhongnan Xu, Jing Peng, Qiaolin Xu, Kui Li, Haoyang Wang, Yanbin Guo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Draft Genome Sequence Analyses of Two Novel Marinobacter suadae sp. nov. and Wenyingzhuangia gilva sp. nov. Isolated from the Root of Suaeda japonica Makino
    Sunho Park, Inhyup Kim, Geeta Chhetri, Yonghee Jung, Haejin Woo, Taegun Seo
    Life.2024; 14(3): 296.     CrossRef
  • Unveiling three novel actinobacterial species (Streptomyces cavernicola sp. nov., Streptomyces solicavernae sp. nov. and Streptomyces luteolus sp. nov.) in soil samples in Phu Pha Phet Cave, Thailand
    Nitcha Chamroensaksri, Supattra Muangham, Chanwit Suriyachadkun, Worawich Phornsiricharoenphant, Wongsakorn Phongsopitanun, Satinee Suetrong, Somboon Tanasupawat
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Cellulomonas alba sp. nov. and Cellulomonas edaphi sp. nov., isolated from wetland soils
    Sunho Park, Inhyup Kim, Geeta Chhetri, Yonghee Jung, Haejin Woo, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Microbacterium algihabitans sp. nov., Microbacterium phycohabitans sp. nov., and Microbacterium galbum sp. nov., isolated from dried beach seaweeds
    Soon Dong Lee, Hong Lim Yang, In Seop Kim
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Bifidobacterium apicola sp. nov., isolated from the gut of honeybee (Apis mellifera)
    Ting-Yu Wang, Hao Wang, Chun Tao Gu
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Polaribacter ponticola sp. nov., isolated from seawater, reclassification of Polaribacter undariae as a later heterotypic synonym of Polaribacter sejongensis, and emended description of Polaribacter sejongensis Kim et al. 2013
    Ju Hye Baek, Mahrukh Butt, Dong Min Han, Jeong Min Kim, Seohui Choi, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Description of Mycolicibacterium arenosum sp. nov. Isolated from Coastal Sand on the Yellow Sea Coast
    Jiseon Jeong, Soyeon Ahn, Thoi Cong Truong, Jong-Hwa Kim, Veeraya Weerawongwiwat, Jung-Sook Lee, Jung-Hoon Yoon, Ampaitip Sukhoom, Wonyong Kim
    Current Microbiology.2024;[Epub]     CrossRef
  • Genome analysis deciphered Chryseobacterium indicum is a distinct species associated with freshwater pufferfish
    Manish Prakash Victor, Ritu Rani Archana Kujur, Lipika Das, Subrata K. Das
    Infection, Genetics and Evolution.2024; 118: 105561.     CrossRef
  • Stable-isotope probing combined with amplicon sequencing and metagenomics identifies key bacterial benzene degraders under microaerobic conditions
    András Táncsics, Anna Bedics, Sinchan Banerjee, André Soares, Erzsébet Baka, Alexander J. Probst, Balázs Kriszt
    Biologia Futura.2024; 75(3): 301.     CrossRef
  • Streptococcus taonis sp. nov., a novel bacterial species isolated from a blood culture of a patient
    Chien-Yu Lee, Chin-Kan Chan, Momoko Chida, Mika Miyashita, Yun-Shien Lee, Hui-Chung Wu, Yu-Chung Chang, Wen-Ting Lin, Yi-Sheng Chen
    Archives of Microbiology.2024;[Epub]     CrossRef
  • Shewanella phaeophyticola sp. nov. and Vibrio algarum sp. nov., isolated from marine brown algae
    Mahrukh Butt, Jaejoon Jung, Jeong Min Kim, Hülya Bayburt, Dong Min Han, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Two Novel Bacterial Species, Rhodanobacter lycopersici sp. nov. and Rhodanobacter geophilus sp. nov., Isolated from the Rhizosphere of Solanum lycopersicum with Plant Growth-Promoting Traits
    Haejin Woo, Inhyup Kim, Geeta Chhetri, Sunho Park, Hyunji Lee, Subin Yook, Taegun Seo
    Microorganisms.2024; 12(11): 2227.     CrossRef
  • Roseateles caseinilyticus sp. nov. and Roseateles cellulosilyticus sp. nov., isolated from rice paddy field soil
    Yoonseop So, Geeta Chhetri, Inhyup Kim, Sunho Park, Yonghee Jung, Taegun Seo
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • A Multilocus Sequence Typing Scheme for Rapid Identification of Xanthomonas citri Based on Whole-Genome Sequencing Data
    Efenaide B. Okoh, Michael Payne, Ruiting Lan, Markus Riegler, Toni A. Chapman, Daniel R. Bogema
    Phytopathology®.2024; 114(7): 1480.     CrossRef
  • Taxonomic characterization of Sphaerotilus microaerophilus sp. nov., a sheath-forming microaerophilic bacterium of activated sludge origin
    Shiori Narihara, Shun Chida, Naoki Matsunaga, Ryosuke Akimoto, Mizuki Akimoto, Aoi Hagio, Tomomi Mori, Tadashi Nittami, Michio Sato, Sehui Mun, Hyeonjin Kang, Ji Hwan Back, Minoru Takeda
    Archives of Microbiology.2024;[Epub]     CrossRef
  • Dietary quality and the gut microbiome in early-stage Parkinson’s disease patients
    Hyun Jeong Yoon, Woorim Kang, Sungyang Jo, Yun Su Hwang, Je Hee Lee, Sun Ju Chung, Yoo Kyoung Park
    Nutritional Neuroscience.2024; 27(7): 761.     CrossRef
  • Shewanella youngdeokensis sp. nov. Isolated from Marine Sediment and Sea Water of East Sea in Republic of Korea
    Y.-S. Lee, H.-R. Jeong, E.-J. Hwang, M. P. Patil, S. S. Choi, Y. B. Seo, G.-D. Kim
    Microbiology.2024; 93(6): 737.     CrossRef
  • Methylomonas rivi sp. nov., Methylomonas rosea sp. nov., Methylomonas aurea sp. nov. and Methylomonas subterranea sp. nov., type I methane-oxidizing bacteria isolated from a freshwater creek and the deep terrestrial subsurface
    Christopher A. Abin, Christopher T. Garner, Krithivasan Sankaranarayanan, Reid A. Sindelar, Kyrah F. Kotary, Rosa M. Garner, Samantha C. Barclay, Haiyuan Cai, Paul A. Lawson, Lee R. Krumholz
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Lysobacter stagni sp. nov. and Limnohabitans lacus sp. nov., isolated from a pond
    Yonghee Jung, Geeta Chhetri, Inhyup Kim, Yoonseop So, Sunho Park, Haejin Woo, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • EzBioCloud: a genome-driven database and platform for microbiome identification and discovery
    Mauricio Chalita, Yeong Ouk Kim, Sein Park, Hyun-Seok Oh, Jae Hyoung Cho, Jeongsup Moon, Nuga Baek, Changsik Moon, Kihyun Lee, Junwon Yang, Gi Gyun Nam, Yeonjae Jung, Seong-In Na, Michael James Bailey, Jongsik Chun
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Description and genomic characterization of Cohnella caldifontis sp. nov., isolated from hot springs in Yunnan province, south-west China
    Ming-Xian Xiang, Cui-Ping Miao, Dian-Yan Zhang, Juan Wang, Yi-Qing Li, Min Yin, ShuKun Tang
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Chitiniphilus purpureus sp. nov., a novel chitin-degrading bacterium isolated from crawfish pond sediment
    Kaiyang Li, Xiong Luo, Rongrong Fan, Zhuoran Ding, Shixue Zheng, Zhengjun Chen
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Phylogenomic analysis of metagenome-assembled genomes indicates new taxa in the order Spirochaetales and proposal of Thalassospirochaeta sargassi gen. nov. sp. nov. from seaweeds
    Kohli Pragya, Pannikurungottu Sreya, Lakshmanan Vighnesh, Dhurka Mahima, Mallick Sushmita, Chintalapati Sasikala, Chintalapati Venkata Ramana
    Systematic and Applied Microbiology.2024; 47(2-3): 126502.     CrossRef
  • Update on the proposed minimal standards for the use of genome data for the taxonomy of prokaryotes
    Raúl Riesco, Martha E. Trujillo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Description of Fuscovulum ytuae sp. nov, a facultative autotroph isolated from the intertidalite of Yangma island, China
    Bin-zhe Zhang, Xiu-dan Xu, Dan-dan Zhou, Xue-Peng Li, Xu-dong Jiao, Jian Zhang
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Phylogenomic analysis uncovers an unexpected capacity for the biosynthesis of secondary metabolites in Pseudoalteromonas
    Jingxuan Wang, Peng Li, Xue Di, Hongmei Lu, Huamao Wei, Shuai Zhi, David P. Fewer, Shan He, Liwei Liu
    European Journal of Medicinal Chemistry.2024; 279: 116840.     CrossRef
  • Roseateles subflavus sp. nov. and Roseateles aquae sp. nov., isolated from artificial pond water and Roseateles violae sp. nov., isolated from a Viola mandshurica root
    Haejin Woo, Geeta Chhetri, Inhyup Kim, Yoonseop So, Sunho Park, Yonghee Jung, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Comamonas endophytica sp. nov., a novel indole acetic acid producing endophyte isolated from bamboo in China
    Jinjun Yue, Fu Yang, Youtie Xiao, Seqiao Lin, Zhengping He, Siyu Wang, Jiayi Zhao, Jinling Yuan, Lubin Li, Lei Liu
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Genome-Based Classification of Pedobacter albus sp. nov. and Pedobacter flavus sp. nov. Isolated from Soil
    Nhan Le Thi Tuyet, Jaisoo Kim
    Diversity.2024; 16(5): 292.     CrossRef
  • Sphingobacterium oryzagri sp. nov., isolated from rice paddy soil
    Seunghwan Kim, Jun Heo, Hyorim Choi, Daseul Lee, Soon-Wo Kwon, Yiseul Kim
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Paracoccus benzoatiresistens sp. nov., a benzoate resistance and selenite reduction bacterium isolated from wetland
    Weidong Mu, Haoran Liu, Bai Guo, Kaiyue Wang, Jinhua Hu, Jianjun Song, Xiuyun Li, Shuzhen Wei, Aijv Liu, Hongliang Liu
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Oceanimonas pelagia sp. nov., a novel biosurfactant-producing and plastic-degrading potential bacterium isolated from marine coastal sediment
    Hsiao-Tsu Yang, Yi-Hsuan Huang, Ying-Ning Ho
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Aquificae overcomes competition by archaeal thermophiles, and crowding by bacterial mesophiles, to dominate the boiling vent-water of a Trans-Himalayan sulfur-borax spring
    Nibendu Mondal, Subhajit Dutta, Sumit Chatterjee, Jagannath Sarkar, Mahamadul Mondal, Chayan Roy, Ranadhir Chakraborty, Wriddhiman Ghosh, Marcos Pileggi
    PLOS ONE.2024; 19(10): e0310595.     CrossRef
  • Simplicispira sedimenti sp. nov., isolated from a sediment of drainage ditch in winery
    Xing Chen, Yuan-Dong Li, Xiu-Ming Liu, Li Gao, Xing-Kui Zhou, Li-Min Dong, Gang Du, Neeli Habib, Wen-Jun Li, Yan-Qing Duan
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Lacticaseibacillus jixiensis sp. nov., Isolated from Traditional Chinese Pickle
    Si-Tong Song, Chun Yan Li, Chun Tao Gu
    Current Microbiology.2024;[Epub]     CrossRef
  • Crenobacter oryzisoli sp. nov., a novel phosphate-solubilizing bacterium isolated from the paddy soil
    Shu-Qun Zhang, Cheng-Jie Xie, Ling Yao, Christopher Rensing, Hao Lin, Guo-Hong Liu, Shun-Gui Zhou
    Archives of Microbiology.2024;[Epub]     CrossRef
  • Flavobacterium capsici sp. nov., isolated from the rhizospheric soils of bell pepper (Capsicum annuum L.)
    Dong Hyun Cho, Yuxin Peng, Zalfa Humaira, Yu Lim Park, Hyun Jung Kim, Rae-Dong Jeong, Cha Young Kim, Jiyoung Lee
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Blastococcus montanus sp. nov., a multi-stress-resistant and bacteriostatic-producing bacterium isolated from the Flaming Mountain, Xinjiang,China
    Kexin Wang, Yang Liu, Xiaowen Cui, Tuo Chen, Guangxiu Liu, Wei Zhang, Zhiyong Han, Gaosen Zhang
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Phylogenomic evaluation of Mangrovimicrobium sediminis gen. nov. sp. nov., the first nitrogen fixing member of the family Halieaceae adapted to mangrove habitat and reclassification of Halioglobus pacificus to Pseudohaliglobus pacificus comb. nov.
    Pravin Kumar, Ashish Verma, Pooja Yadav, Joyasree Das, Lalit Kumar, Srinivasan Krishnamurthi
    Science of The Total Environment.2024; 933: 172995.     CrossRef
  • Arcobacteraceae are ubiquitous mixotrophic bacteria playing important roles in carbon, nitrogen, and sulfur cycling in global oceans
    Jianyang Li, Shizheng Xiang, Yufei Li, Ruolin Cheng, Qiliang Lai, Liping Wang, Guizhen Li, Chunming Dong, Zongze Shao, Thomas J. Sharpton
    mSystems.2024;[Epub]     CrossRef
  • Niabella digestorum sp. nov., a High Cell-Surface Hydrophobic Bacterium Isolated from Waste Digestion System
    Ling Zhang, Chuansheng Geng, Xingjuan Chen, Letian Chen, Tongchu Deng, Meiying Xu
    Current Microbiology.2024;[Epub]     CrossRef
  • Safety assessment, whole genome sequence, and metabolome analysis of Streptococcus thermophilus CICC 20372 for bone cement fermentation
    Rongshan Li, Yangfan Hu, Yang Xu, Jinlong Zhou, Yunfang Li, Qing Liu, Bo Yu
    Archives of Microbiology.2024;[Epub]     CrossRef
  • Methylocystis suflitae sp. nov., a novel type II methanotrophic bacterium isolated from landfill cover soil
    Christopher T. Garner, Krithivasan Sankaranarayanan, Christopher A. Abin, Rosa M. Garner, Haiyuan Cai, Paul A. Lawson, Lee R. Krumholz
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Polysaccharide degradation in Cellvibrionaceae: Genomic insights of the novel chitin-degrading marine bacterium, strain KSP-S5-2, and its chitinolytic activity
    Nyok-Sean Lau, Go Furusawa
    Science of The Total Environment.2024; 912: 169134.     CrossRef
  • Nitrogen source influences the interactions of comammox bacteria with aerobic nitrifiers
    Katherine Jeanne Vilardi, Juliet Johnston, Zihan Dai, Irmarie Cotto, Erin Tuttle, Ariana Patterson, Aron Stubbins, Kelsey J. Pieper, Ameet J. Pinto, Erik F. Y. Hom
    Microbiology Spectrum.2024;[Epub]     CrossRef
  • Falsiroseomonas oryziterrae sp. nov., and Falsiroseomonas oryzae sp. nov., isolated from rice paddy soil
    Hyo-Jin Lee, Kyung-Sook Whang
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Pseudoalteromonas simplex sp. nov. Isolated from the Skin of Bandtail Puffer Fish (Sphoeroides spengleri)
    Hannah K. Mattsson, Mayanne A. M. de Freitas, Gustavo P. R. de Azevedo, Vinicius Salazar, Verônica V. Vieira, Diogo A. Tschoeke, Cristiane C. Thompson, Fabiano L. Thompson
    Current Microbiology.2024;[Epub]     CrossRef
  • Genomic evidence that Ornithinicoccus soli Jiang et al. 2020 is a later heterotypic synonym of Segeticoccus rhizosphaerae Lee and Whang 2020
    Qing Liu, Yu-Hua Xin
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Roseobacter fucihabitans sp. nov., isolated from the brown alga Fucus spiralis
    Sarah Hahnke, Martine Berger, Andrea Schlingloff, Isha Athale, Jacqueline Wolf, Meina Neumann-Schaal, Adenike Adenaya, Anja Poehlein, Rolf Daniel, Jörn Petersen, Thorsten Brinkhoff
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Complete genome sequence of a novel Prescottella sp. R16 isolate from deep-sea sediments in the western Pacific
    Lingqi Ma, Yuqi Bai, Weili Wang, Shengxiang Pei, Gaiyun Zhang
    Frontiers in Genetics.2024;[Epub]     CrossRef
  • Randomized Clinical Trials Demonstrate the Safety Assessment of Alkalihalobacillus clausii AO1125 for Use as a Probiotic in Humans
    Gissel García, Josanne Soto, Antonio Díaz, Jesús Barreto, Carmen Soto, Ana Beatriz Pérez, Suselys Boffill, Raúl De Jesús Cano
    Microorganisms.2024; 12(11): 2299.     CrossRef
  • Ureibacillus aquaedulcis sp. nov., isolated from freshwater well and reclassification of Lysinibacillus yapensis and Lysinibacillus antri as Ureibacillus yapensis comb. nov. and Ureibacillus antri comb. nov.
    Amit Yadav, Ruchi Teware, Agrima Bhatt, Yash Bhavsar, Akanksha Maurya, Vipool Thorat, Venkata Ramana Vemuluri, Kiran Kirdat
    Archives of Microbiology.2024;[Epub]     CrossRef
  • Diverse and specialized metabolic capabilities of microbes in oligotrophic built environments
    Xinzhao Tong, Danli Luo, Marcus H. Y. Leung, Justin Y. Y. Lee, Zhiyong Shen, Wengyao Jiang, Christopher E. Mason, Patrick K. H. Lee
    Microbiome.2024;[Epub]     CrossRef
  • Sabulicella glaciei sp. nov., Isolated from Glacier, and Reclassification of Roseomonas rubea, Roseomonas ponticola and Roseomonas oleicola as Neoroseomonas rubea comb. nov., Falsiroseomonas ponticola comb. nov. and Falsiroseomonas oleicola comb. nov
    Qing Liu, Yu-Hua Xin
    Current Microbiology.2024;[Epub]     CrossRef
  • A functionally augmented carbohydrate utilization locus from herbivore gut microbiota fueled by dietary β-glucans
    Fernanda Mandelli, Marcele Pandeló Martins, Mariana Chinaglia, Evandro Antonio de Lima, Mariana Abrahão Bueno Morais, Tatiani Brenelli Lima, Lucélia Cabral, Renan Augusto Siqueira Pirolla, Felipe Jun Fuzita, Douglas Antônio Alvaredo Paixão, Maxuel de Oliv
    npj Biofilms and Microbiomes.2024;[Epub]     CrossRef
  • Active coexistence of the novel gammaproteobacterial methanotroph ‘Ca.Methylocalor cossyra’ CH1 and verrucomicrobial methanotrophs in acidic, hot geothermal soil
    Changqing Liu, Rob A. Schmitz, Arjan Pol, Carmen Hogendoorn, Daniël Verhagen, Stijn H. Peeters, Theo A. van Alen, Geert Cremers, Rob A. Mesman, Huub J. M. Op den Camp
    Environmental Microbiology.2024;[Epub]     CrossRef
  • Fodinisporobacter ferrooxydans gen. nov., sp. nov.—A Spore-Forming Ferrous-Oxidizing Bacterium Isolated from a Polymetallic Mine
    Zhen Jiang, Xiutong Li, Zonglin Liang, Zebao Tan, Nan Zhou, Ying Liu, Zhenghua Liu, Huaqun Yin, Kun Luo, Supawadee Ingsriswang, Shuangjiang Liu, Chengying Jiang
    Microorganisms.2024; 12(5): 853.     CrossRef
  • Massilia agrisoli sp. nov., isolated from rhizospheric soil of banana
    Md. Amdadul Huq, Juncai Ma, Sathiyaraj Srinivasan, Md. Anowar Khasru Parvez, M. Mizanur Rahman, Masoumeh Naserkheil, Md. Abuhena, Pulak Maitra, Fahadul Islam, Kihong NAM, Jong-Hyun Park, Shahina Akter
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Tamlana laminarinivorans sp. nov. and Tamlana sargassicola sp. nov., two novel species isolated from Sargassum, show genomic and physiological adaptations for a Sargassum-associated lifestyle
    Jin Li, Yumei Liang, Zhixiao He, Lu An, Yongjin Liu, Mingqi Zhong, Zhong Hu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Ecophysiological and Genomic Characterization of the Freshwater Complete Ammonia OxidizerNitrospirasp. Strain BO4
    Sabita Ghimire-Kafle, Matt E. Weaver, Annette Bollmann, Jennifer B. Glass
    Applied and Environmental Microbiology.2023;[Epub]     CrossRef
  • Bacteroides faecium sp. nov. isolated from human faeces
    Juseok Kim, Hye Seon Song, Joon Yong Kim, Tae Woong Whon, Won-Hyong Chung, Young-Do Nam, Yoon-E Choi, Seong Woon Roh
    International Journal of Systematic and Evolutionary Microbiology.2023;[Epub]     CrossRef
  • A minireview on the bioinformatics analysis of mobile gene elements in microbiome research
    Jana Schwarzerova, Anastasiya Labanava, Ivan Rychlik, Margaret Varga, Darina Cejkova
    Frontiers in Bacteriology.2023;[Epub]     CrossRef
  • Curtanaerobium respiraculi gen. nov., sp. nov., a novel anaerobic bacterium isolated from human bronchoalveolar lavage fluid
    Yifan Sun, Likun Wang, Dexing Han, Jianjie Li, Yuejiao Liu, Yafang Tan, Zhiyuan Pan, Ruifu Yang, Pinghua Qu, Ziping Wang, Yujing Bi
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Faecalibacterium hominis Liu et al. 2023 is a later heterotypic synonym of Faecalibacterium duncaniae Sakamoto et al. 2022
    Mitsuo Sakamoto, Naomi Sakurai, Hiroki Tanno, Takao Iino, Moriya Ohkuma, Akihito Endo
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Trichlorobacter ammonificans, a dedicated acetate-dependent ammonifier with a novel module for dissimilatory nitrate reduction to ammonia
    Dimitry Y Sorokin, Tamara V Tikhonova, Hanna Koch, Eveline M van den Berg, Renske S Hinderks, Martin Pabst, Natalia I Dergousova, Anastasia Y Soloveva, Gijs J Kuenen, Vladimir O Popov, Mark C M van Loosdrecht, Sebastian Lücker
    The ISME Journal.2023; 17(10): 1639.     CrossRef
  • Limobrevibacterium gyesilva gen. nov., sp. nov., Isolated from Forest Soil
    Nhan Le Thi Tuyet, Jaisoo Kim
    Diversity.2023; 15(5): 684.     CrossRef
  • Microbacterium tenebrionis sp. nov. and Microbacterium allomyrinae sp. nov., isolated from larvae of Tenebrio molitor L. and Allomyrina dichotoma, respectively
    Soon Dong Lee, In Seop Kim
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Roseateles albus sp. nov., Roseateles koreensis sp. nov. and Janthinobacterium fluminis sp. nov., isolated from freshwater at Jucheon River, and emended description of Roseateles aquaticus comb. nov.
    Sunho Park, Inhyup Kim, Geeta Chhetri, Yoonseop So, Yonghee Jung, Haejin Woo, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Species-specificity of the secondary biosynthetic potential in Bacillus
    Qun-Jian Yin, Ti-Ti Ying, Zhen-Yi Zhou, Gang-Ao Hu, Cai-Ling Yang, Yi Hua, Hong Wang, Bin Wei
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Taxonomic Study of Three Novel Paenibacillus Species with Cold-Adapted Plant Growth-Promoting Capacities Isolated from Root of Larix gmelinii
    Han Xue, Yan Tu, Tengfei Ma, Ning Jiang, Chungen Piao, Yong Li
    Microorganisms.2023; 11(1): 130.     CrossRef
  • Characterization and Antioxidant Activity of Exopolysaccharides Produced by Lysobacter soyae sp. nov Isolated from the Root of Glycine max L.
    Inhyup Kim, Geeta Chhetri, Yoonseop So, Sunho Park, Yonghee Jung, Haejin Woo, Taegun Seo
    Microorganisms.2023; 11(8): 1900.     CrossRef
  • Cyclitol metabolism is a central feature of Burkholderia leaf symbionts
    Bram Danneels, Monique Blignaut, Guillaume Marti, Simon Sieber, Peter Vandamme, Marion Meyer, Aurélien Carlier
    Environmental Microbiology.2023; 25(2): 454.     CrossRef
  • Sphingomonas abietis sp. nov., an Endophytic Bacterium Isolated from Korean Fir
    Lingmin Jiang, Hanna Choe, Yuxin Peng, Doeun Jeon, Donghyun Cho, Yue Jiang, Ju Huck Lee, Cha Young Kim, Jiyoung Lee
    Journal of Microbiology and Biotechnology.2023; 33(10): 1292.     CrossRef
  • Description of Brachybacterium sillae sp. nov., a thermophilic bacterium isolated from a hot spring
    Dariimaa Ganbat, DoKyung Oh, Yong-Jik Lee, Dong-Woo Lee, Seong-Bo Kim, Won-Jae Chi, Ki-Eun Lee, Byoung-Hee Lee, You-Jung Jung, Jung-Sook Lee, Sang-Jae Lee
    Antonie van Leeuwenhoek.2023; 116(8): 791.     CrossRef
  • Bacillus velezensis RC116 Inhibits the Pathogens of Bacterial Wilt and Fusarium Wilt in Tomato with Multiple Biocontrol Traits
    Honghong Dong, Ruixiang Gao, Yijie Dong, Qing Yao, Honghui Zhu
    International Journal of Molecular Sciences.2023; 24(10): 8527.     CrossRef
  • Cultivation of marine bacteria of the SAR202 clade
    Yeonjung Lim, Ji-Hui Seo, Stephen J. Giovannoni, Ilnam Kang, Jang-Cheon Cho
    Nature Communications.2023;[Epub]     CrossRef
  • Complex evolutionary history of photosynthesis in Bradyrhizobium
    Juanita R. Avontuur, P. Markus Wilken, Marike Palmer, Martin P. A. Coetzee, Tomasz Stępkowski, Stephanus N. Venter, Emma T. Steenkamp
    Microbial Genomics .2023;[Epub]     CrossRef
  • Brevibacillus ruminantium sp. nov., isolated from cow faeces
    Seunghwan Kim, Jun Heo, Soon-Wo Kwon, Daseul Lee, Byeong-Hak Han, Seung-Beom Hong, Yiseul Kim
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Rhizobium acaciae sp. nov., a new nitrogen-fixing symbiovar isolated from root nodules of Acacia saligna in Tunisia
    Jihed Hsouna, Houda Ilahi, Jia-Cheng Han, Takwa Gritli, Walid Ellouze, Xiao Xia Zhang, Maroua Mansouri, Praveen Rahi, Mustapha Missbah El Idrissi, Mouad Lamrabet, M'hamed Oubla, Pierre Emmanuel Courty, Daniel Wipf, James T. Tambong, Bacem Mnasri
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Asticcacaulis aquaticus sp. nov., Asticcacaulis currens sp. nov. and Asticcacaulis machinosus sp. nov., isolated from streams in PR China
    Huibin Lu, Li Chen, Lingyang Kong, Linpei Huang, Guangjie Chen
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Maritalea mediterranea sp. nov., isolated from marine plastic residues
    Àngela Vidal-Verdú, Esther Molina-Menor, Leila Satari, Javier Pascual, Juli Peretó, Manuel Porcar
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Acidaminococcus homini s sp. nov., Amedibacillus hominis sp. nov., Lientehia hominis gen. nov. sp. nov., Merdimmobilis hominis gen. nov. sp. nov., and Paraeggerthella hominis sp. nov., isolated from human faeces
    Rashidin Abdugheni, Dan-Hua Li, Yu-Jing Wang, Meng-Xuan Du, Nan Zhou, Chang Liu, Shuang-Jiang Liu
    International Journal of Systematic and Evolutionary Microbiology.2023;[Epub]     CrossRef
  • Streptomyces albidoflavus Q antifungal metabolites inhibit the ergosterol biosynthesis pathway and yeast growth in fluconazole-resistant Candida glabrata : phylogenomic and metabolomic analyses
    Celia Bautista-Crescencio, Arturo Casimiro-Ramos, M. Jonathan Fragoso-Vázquez, José Correa-Basurto, Carlos Olano, César Hernández-Rodríguez, Lourdes Villa-Tanaca, Edward Sionov
    Microbiology Spectrum.2023;[Epub]     CrossRef
  • Neopusillimonas aromaticivorans sp. nov. isolated from poultry manure
    Shih-Yao Lin, Tzu-Yu Lin, Asif Hameed, Yu-Shan Tang, Chiu-Chung Young
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Microbacterium nymphoidis sp. nov. and Microbacterium festucae sp. nov., two novel species with high plant-promoting potential isolated from wetland plants in China
    Chunyi Li, Xiaoqian Jin, Fu Yang, Jiayi Zhao, Siyu Wang, Qiwu Sun, Lubin Li, Lei Liu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Salipiger pentaromativorans sp. nov., a polycyclic aromatic hydrocarbon-degrading bacterium isolated from mangrove sediment
    Jiangwei Li, Qiliang Lai, Anyi Hu, Huijie Liu, Dan Qin, Xiaoyong Yang, Yun Tian, Chang-Ping Yu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Dermatobacter hominis gen. nov., sp. nov., a new member of the family Iamiaceae, revealed the potential utilisation of skin-derived metabolites
    HyungWoo Jo, Chaeyun Baek, Young Mok Heo, Hye-Been Kim, Haeun Lee, Seunghyun Kang, Seyoung Mun, Yunseok Oh, Doyeong Ko, Kyudong Han, Raúl Riesco, Martha E. Trujillo, Dong-Geol Lee
    Antonie van Leeuwenhoek.2023; 116(11): 1139.     CrossRef
  • Cerina litoralis gen. nov., sp. nov., a novel potential polysaccharide degrading bacterium of the family Flavobacteriaceae, isolated from marine sediment
    Ya-Wei Wang, Xin-Hui Wang, Jing Zhang, Zong-Jun Du, Da-Shuai Mu
    Antonie van Leeuwenhoek.2023; 116(12): 1447.     CrossRef
  • Sphingomonas liriopis sp. nov., Sphingomonas donggukensis sp. nov., and Sphingomonas tagetis sp. nov., isolated from Liriope platyphylla fruit, soil, and Tagetes patula roots
    Inhyup Kim, Geeta Chhetri, Yoonseop So, Yonghee Jung, Sunho Park, Taegun Seo
    Archives of Microbiology.2023;[Epub]     CrossRef
  • Characterization of phytopathogen-preying Hyalangium versicolor sp. nov., and proposal for the reclassification of Cystobacter gracilis as Hyalangium gracile comb. Nov
    Xianjiao Zhang, Guangda Feng, Yang Liu, Jiali Li, Xiaoqin Deng, Qing Yao, Honghui Zhu
    Archives of Microbiology.2023;[Epub]     CrossRef
  • Thiorhodovibrio frisius and Trv. litoralis spp. nov., Two Novel Members from a Clade of Fastidious Purple Sulfur Bacteria That Exhibit Unique Red-Shifted Light-Harvesting Capabilities
    Anika Methner, Steven Kuzyk, Jörn Petersen, Sabine Bauer, Henner Brinkmann, Katja Sichau, Gerhard Wanner, Jacqueline Wolf, Meina Neumann-Schaal, Petra Henke, Marcus Tank, Cathrin Spröer, Boyke Bunk, Jörg Overmann
    Microorganisms.2023; 11(10): 2394.     CrossRef
  • Genomic attributes and characterization of novel exopolysaccharide-producing bacterium Halomonas piscis sp. nov. isolated from jeotgal
    Bora Kim, Ah-In Yang, Hae-In Joe, Ki Hyun Kim, Hanna Choe, Sung-Hong Joe, Min Ok Jun, Na-Ri Shin
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Corynebacterium lipophilum sp. nov., a lipophilic bacterium isolated from clinical breast specimens and emended description of the species Corynebacterium pilbarense
    Qiang Luo, Haimin Luo, Tianqi Zhang, Xiaofang Liu, Xiaowei Chen, Qianming Chen, Junhui Feng, Pinghua Qu, Cha Chen, Ning Xu
    Antonie van Leeuwenhoek.2023; 116(10): 1091.     CrossRef
  • Arcobacter roscoffensis sp. nov., a marine bacterium isolated from coastal seawater
    Javier Pascual, Cendrella Lepleux, Anika Methner, Cathrin Spröer, Boyke Bunk, Jörg Overmann
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Ferranicluibacter rubi gen. nov., sp. nov., a new member of family Rhizobiaceae isolated from stems of elmleaf blackberry (Rubus ulmifolius Schott) in Northwest Spain
    Rocio Roca-Couso, Jose David Flores-Felix, Jose M. Igual, Paula García-Fraile, Encarna Velázquez, Raúl Rivas
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Sulfurovum mangrovi sp. nov., an obligately chemolithoautotrophic, hydrogen-oxidizing bacterium isolated from coastal marine sediments
    Yufei Li, Shasha Wang, Bowen Ji, Qing Yuan, Shiping Wei, Qiliang Lai, Kaiyue Wu, Lijing Jiang, Zongze Shao
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Hominibacterium faecale gen. nov., sp. nov., an anaerobic l-arginine-degrading bacterium isolated from human feces
    Noori Borhanudin, Min Yang, Andrei V. Chaplin, Jiang Li, Qiong Wang, Li-rong Dai, Ke-jia Wu, Shi-chun Ma, Boris A. Efimov, Lei Cheng
    Archives of Microbiology.2023;[Epub]     CrossRef
  • Curtobacterium caseinilyticum sp. nov., Curtobacterium subtropicum sp. nov. and Curtobacterium citri sp. nov., isolated from citrus phyllosphere
    Guang-Da Feng, Jiali Li, Songzhen Yang, Jun Zhang, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Vibrio intestinalis sp. nov., isolated from intestine of seahorse
    Libo Yu, Shiping Wei, Zhidong Zhou, Zongze Shao
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Chitinophaga nivalis sp. nov., isolated from forest soil in Pyeongchang, Republic of Korea
    Ngoc Hoang Trinh, Jaisoo Kim
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Reclassification of Clostridium cocleatum, Clostridium ramosum, Clostridium spiroforme and Clostridium saccharogumia as Thomasclavelia cocleata gen. nov., comb. nov., Thomasclavelia ramosa comb. nov., gen. nov., Thomasclavelia spiroformis comb. nov. and T
    Paul A. Lawson, Liz Saavedra Perez, Krithivasan Sankaranarayanan
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Paracoccus albicereus sp. nov., isolated from the shallow-sea hydrothermal system off Kueishantao Island
    Yajie He, Dan Lin, Beihan Chen, Xinzhu Liu, Jianing Ye, Jia Sun, Kai Tang
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Flectobacillus longus sp. nov. and Flectobacillus rivi sp. nov., isolated from streams in China and reclassification of Flectobacillus rhizosphaerae as a synonym of Flectobacillus roseus
    Huibin Lu, Ping Li, Li Chen, Guangjie Chen
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Aequorivita vitellina sp. nov. and Aequorivita xiaoshiensis sp. nov., isolated from marine sediment
    Ya-Wei Wang, Jing Zhang, Shu-Xin Wang, Zong-Jun Du, Da-Shuai Mu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Two novel symbiovars of Bradyrhizobium yuanmingense, americaense and caribense, the symbiovar tropici of Bradyrhizobium pachyrhizi and the symbiovar cajani of Bradyrhizobium cajani are microsymbionts of the legume Cajanus cajan in Dominican Republic
    José David Flores-Félix, Fernando Sánchez-Juanes, Juan Araujo, César Antonio Díaz-Alcántara, Encarna Velázquez, Fernando González-Andrés
    Systematic and Applied Microbiology.2023; 46(5): 126454.     CrossRef
  • Frateuria soli sp. nov. and Frateuria edaphi sp. nov., isolated from greenhouse soil
    Miyoung Won, Jun Heo, Hang-Yeon Weon, Daseul Lee, Byeong-Hak Han, Seung-Beom Hong, Soon-Wo Kwon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Four new Microbacterium species isolated from seaweeds and reclassification of five Microbacterium species with a proposal of Paramicrobacterium gen. nov. under a genome-based framework of the genus Microbacterium
    Soon Dong Lee, Hong Lim Yang, In Seop Kim
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Actinomadura terrae sp. nov. and Actinomadura litoris OS3-89, isolated from rhizosphere soil of cactus
    Soon Dong Lee, Hong Lim Yang, In Seop Kim, Hanna Choe, Ji-Sun Kim
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Bioplastic (poly-3-hydroxybutyrate)-producing Massilia endophytica sp. nov., isolated from Cannabis sativa L. ‘Cheungsam’
    Doeun Jeon, Lingmin Jiang, Ki-Hyun Kim, Yuxin Peng, Donghyun Cho, Rae-Dong Jeong, Cha Young Kim, Jae Cheol Jeong, Jiyoung Lee
    Scientific Reports.2023;[Epub]     CrossRef
  • Similar but different: Characterization of dddD gene–mediated DMSP metabolism among coral-associated Endozoicomonas
    Yu-Jing Chiou, Ya-Fan Chan, Sheng-Ping Yu, Chih-Ying Lu, Silver Sung-Yun Hsiao, Pei-Wen Chiang, Ting-Chang Hsu, Po-Yu Liu, Naohisa Wada, Yu Lee, Wann-Neng Jane, Der-Chuen Lee, Yu-Wen Huang, Sen-Lin Tang
    Science Advances.2023;[Epub]     CrossRef
  • Halomonas dongshanensis sp. nov., isolated from the seawater of Dongshan Island
    Wen-zhen Lin, Lin-feng Gong, Ying Guo, Ru-zhen Liu, Wei Xu, Qi-yang Guan, Chi-ming Guo, Zhi-kai Lin, Hong-yan Meng, Xiao-yao Chen
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Reclassification of Sabulilitoribacter multivorans and Sabulilitoribacter arenilitoris as Flaviramulus multivorans comb. nov. and Wocania arenilitoris comb. nov., respectively, based on genome sequence analysis
    Ang Liu, Xinyue Dong, Wanting Wang, Jiayi Qin, Hongyu Leng, Chenlong Yan, Longyu Zhao
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Tahibacter harae sp. nov., isolated from pig farm soil in Guangdong, PR China
    Haixin Chen, Yang Zhou, Qing Yao, Hongxia Jiang, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Paenibacillus soyae sp. nov., isolated from the rhizosphere of soya bean
    Hui Zhao, Yue Su, Qihui Gu, Jumei Zhang, Xinqiang Xie, Qingping Wu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Maribacter aquimaris sp. nov., isolated from seawater adjacent to Fildes Peninsula, Antarctica
    Yanfeng Zhang, Yanwu Zhai, Lulu Mu, Miaomiao Hu, Wei Fang, Yazhong Xiao, Zemin Fang
    Antonie van Leeuwenhoek.2023; 116(8): 753.     CrossRef
  • Three novel marine species of the genus Reichenbachiella exhibiting degradation of complex polysaccharides
    Neak Muhammad, Forbes Avila, Olga I. Nedashkovskaya, Song-Gun Kim
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Isolation of Spirosoma foliorum sp. nov. from the fallen leaf of Acer palmatum by a novel cultivation technique
    Ho Le Han, Dian Alfian Nurcahyanto, Neak Muhammad, Yong-Jae Lee, Tra T. H. Nguyen, Song-Gun Kim, Sook Sin Chan, Kuan Shiong Khoo, Kit Wayne Chew, Pau Loke Show, Thi Ngoc Thu Tran, Thi Dong Phuong Nguyen, Chen Yaw Chiu
    Scientific Reports.2023;[Epub]     CrossRef
  • Identification and genomic analysis of Pseudosulfitobacter koreense sp. nov. isolated from toxin-producing dinoflagellate Alexandrium pacificum
    Yue Jiang, Zhun Li
    Archives of Microbiology.2023;[Epub]     CrossRef
  • Agromyces larvae sp. nov., a novel actinobacterium isolated from gut of larvae of Protaetia brevitarsis seulensis
    Miyoung Won, Parthiban Subramanian, Seunghwan Kim, Jun Heo, Hanako Naito, Tomomi Asano, Moriyuki Hamada, Soon-Wo Kwon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Antioxidant prodigiosin-producing cold-adapted Janthinobacterium sp. ERMR3:09 from a glacier moraine: Genomic elucidation of cold adaptation and pigment biosynthesis
    Srijana Mukhia, Anil Kumar, Rakshak Kumar
    Gene.2023; 857: 147178.     CrossRef
  • Oryzibacter oryziterrae gen. nov., sp. nov., isolated from rice paddy soil
    Hyo-Jin Lee, Kyung-Sook Whang
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Trinickia mobilis sp. nov. and Trinickia acidisoli sp. nov., isolated from soil
    You-qi Wang, Bing-nan Zhao, Xiu-yin Guo, Ke-cheng Wu, Li-hong Qiu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Metabolic Versatility of the FamilyHalieaceaeRevealed by the Genomics of Novel Cultured Isolates
    Shan-Hui Li, Ilnam Kang, Jang-Cheon Cho, Eva C. Sonnenschein
    Microbiology Spectrum.2023;[Epub]     CrossRef
  • Description of Luteibacter aegosomatis sp. nov., Luteibacter aegosomaticola sp. nov., and Luteibacter aegosomatissinici sp. nov. isolated from the Intestines of Aegosoma sinicum Larvae
    Hae-In Joe, Jee-Won Choi, June-Young Lee, Hojun Sung, Su-Won Jeong, Yun-Seok Jeong, Jae-Yun Lee, Jin-Woo Bae
    Journal of Microbiology.2023; 61(6): 603.     CrossRef
  • Alkalimarinus alittae sp. nov., isolated from gut of marine sandworm (Alitta virens) and emended description of the genus Alkalimarinus
    Ah-In Yang, Hae-In Joe, Hanna Choe, Han Sol Kim, Mi Kyung Eom, Zhun Li, Min Ok Jun, Bora Kim, Jung-Sook Lee, Na-Ri Shin
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Pan-Genome Analyses of the Genus Cohnella and Proposal of the Novel Species Cohnella silvisoli sp. nov., Isolated from Forest Soil
    Chunling Wang, Lutian Mao, Gegen Bao, Honghui Zhu
    Microorganisms.2023; 11(11): 2726.     CrossRef
  • Five novel Hymenobacter species isolated from air: Hymenobacter cellulosilyticus sp. nov., Hymenobacter cellulosivorans sp. nov., Hymenobacter aerilatus sp. nov., Hymenobacter sublimis sp. nov. and Hymenobacter volaticus sp. nov.
    Yiseul Kim, Parthiban Subramanian, Hyorim Choi, Hang-Yeon Weon, Seunghwan Kim, Soon-Wo Kwon, Daseul Lee, Byeong-Hak Han, Seung-Beom Hong, Jun Heo
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Vogesella aquatica sp. nov. and Vogesella margarita sp. nov., isolated from rivers in Southwest China
    Huibin Lu, Li Chen, Lingyang Kong, Linpei Huang, Guangjie Chen
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • tilS and rpoB: New Molecular Markers for Phylogenetic and Biodiversity Studies of the Genus Thiothrix
    Nikolai V. Ravin, Dmitry D. Smolyakov, Nikita D. Markov, Alexey V. Beletsky, Andrey V. Mardanov, Tatyana S. Rudenko, Margarita Yu. Grabovich
    Microorganisms.2023; 11(10): 2521.     CrossRef
  • Poseidonibacter ostreae sp. nov., Isolated from the Gut of Ostrea from the Seomjin River
    Kiwoon Baek, Sumin Jang, Eu Jin Chung, Shi Hyun Ryu, Ahyoung Choi
    Diversity.2023; 15(8): 920.     CrossRef
  • Paenibacillus dendrobii sp. nov., an indole-3-acetic acid-producing endophytic bacterium isolated from Dendrobium nobile
    Yadong Hu, Hongjie Li, Yaoyi Chen, Qiling Zhang, Shigang Zheng, Dan Rao, Ze Chun, Ruoxi Zhao
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Gillisia lutea sp. nov., isolated from marine aluminium residues from the Mediterranean sea
    Àngela Vidal-Verdú, Esther Molina-Menor, Javier Pascual, Juli Peretó, Manuel Porcar
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Flavobacterium potami sp. nov., a multi-metal resistance genes harbouring bacterium isolated from shallow river silt
    Shucheng Li, Sidi Mao, Weidong Mu, Bai Guo, Chen Li, Qing Zhu, Xiaoxiao Hou, Yanfang Zhao, Shuzhen Wei, Hongliang Liu, Aiju Liu
    Antonie van Leeuwenhoek.2023; 116(3): 265.     CrossRef
  • Ligilactobacillus cholophilus sp. nov., isolated from pickled potherb mustard (Brassica juncea Coss.)
    Quanlu Ren, Danqi Wang, Jin Han, Jing Wang, Zhenmin Liu, Zhengjun Wu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • EasyCGTree: a pipeline for prokaryotic phylogenomic analysis based on core gene sets
    Dao-Feng Zhang, Wei He, Zongze Shao, Iftikhar Ahmed, Yuqin Zhang, Wen-Jun Li, Zhe Zhao
    BMC Bioinformatics.2023;[Epub]     CrossRef
  • Genome-based analyses of the genus Acidovorax: proposal of the two novel genera Paracidovorax gen. nov., Paenacidovorax gen. nov. and the reclassification of Acidovorax antarcticus as Comamonas antarctica comb. nov. and emended description of the genus Ac
    Juan Du, Yang Liu, Honghui Zhu
    Archives of Microbiology.2023;[Epub]     CrossRef
  • Genomic insights of an alkaliphilic bacterium Halalkalibacter alkaliphilus sp. nov. isolated from an Indian Soda Lake
    Amaraja Joshi, Sonia Thite, Tushar Lodha, Neetha Joseph, Purva Mengade
    Antonie van Leeuwenhoek.2023; 116(5): 435.     CrossRef
  • Genome-Wide Pathway Exploration of the Epidermidibacterium keratini EPI-7T
    Yunseok Oh, Seyoung Mun, Young-Bong Choi, HyungWoo Jo, Dong-Geol Lee, Kyudong Han
    Microorganisms.2023; 11(4): 870.     CrossRef
  • Pseudomonas cucumis sp. nov., isolated from the rhizosphere of crop plants
    Kaiji Liao, Jianying Liu, Yi-Lin Gu, Can Wang, Hai-Lei Wei
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Three marine species of the genus Fulvivirga, rich sources of carbohydrate-active enzymes degrading alginate, chitin, laminarin, starch, and xylan
    Tra T. H. Nguyen, Tien Q. Vuong, Ho Le Han, Zhun Li, Yong-Jae Lee, Jaeho Ko, Olga I. Nedashkovskaya, Song-Gun Kim
    Scientific Reports.2023;[Epub]     CrossRef
  • Novosphingobium beihaiensis sp. nov., a novel pesticide-tolerant bacterium isolated from mangrove sediments
    Wenjin Hu, Yiying Huang, Yingjing Liu, Xiaoying Zhou, Shushi Huang, Jiemei Chu, Xinli Pan
    Antonie van Leeuwenhoek.2023; 116(11): 1151.     CrossRef
  • Paracoccus onchidii sp. nov., a moderately halophilic bacterium isolated from a marine invertebrate from the South China Sea
    Shan-shan Xu, Qi-liang Lai, Zeng-zhi Liu, Ying Xu
    Antonie van Leeuwenhoek.2023; 116(8): 801.     CrossRef
  • Ideonella oryzae sp. nov., isolated from soil, and Spirosoma liriopis sp. nov., isolated from fruits of Liriope platyphylla
    Yonghee Jung, Geeta Chhetri, Inhyup Kim, Yoonseop So, Sunho Park, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Mariniradius sediminis sp. nov., a multi-xenobiotics degrading genes harbouring bacterium isolated from sediment of river
    Shucheng Li, Weidong Mu, Haoran Liu, Bai Guo, Sidi Mao, Changqing Su, Hui Li, Zhiqiang Zhang, Aijv Liu, Shuzhen Wei, Hongliang Liu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Description of Xanthocytophaga agilis sp. nov. and Xanthocytophaga flavus sp. nov. of the new genus Xanthocytophaga gen. nov and the proposal of Rhodocytophagaceae fam. nov. within the order Cytophagales
    Xianjiao Zhang, Guang-Da Feng, Yang Liu, Fan Yang, Yanxuan Li, Xiaoqin Deng, Honghui Zhu, Qing Yao
    Archives of Microbiology.2023;[Epub]     CrossRef
  • A nostoxanthin-producing bacterium, Sphingomonas nostoxanthinifaciens sp. nov., alleviates the salt stress of Arabidopsis seedlings by scavenging of reactive oxygen species
    Lingmin Jiang, Jiyoon Seo, Yuxin Peng, Doeun Jeon, Ju Huck Lee, Cha Young Kim, Jiyoung Lee
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Halobacillus salinarum sp. nov., Halobacillus shinanisalinarum sp. nov. and Halobacillus amylolyticus sp. nov., isolated from saltern soil
    Yiseul Kim, Seunghwan Kim, Soon-Wo Kwon, Hang-Yeon Weon, Hanako Naito, Tomomi Asano, Moriyuki Hamada, Jun Heo
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Lignin-oxidizing and xylan-hydrolyzing Vibrio involved in the mineralization of plant detritus in the continental slope
    Jianyang Li, Chunming Dong, Biswarup Sen, Qiliang Lai, Linfeng Gong, Guangyi Wang, Zongze Shao
    Science of The Total Environment.2023; 854: 158714.     CrossRef
  • Alteromonas gilva sp. nov. and Erythrobacter fulvus sp. nov., isolated from a tidal mudflat
    Sunho Park, Inhyup Kim, Geeta Chhetri, Yoonseop So, Yonghee Jung, Haejin Woo, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Sphingobium nicotianae sp. nov., isolated from tobacco soil
    Rongrong Fan, Xiong Luo, Mengjuan Hong, Ruijia Yang, Xinyi Dong, Heli Shi, Mingshun Li
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Investigation of the potential of Brevibacillus spp. for the biosynthesis of nonribosomally produced bioactive compounds by combination of genome mining with MALDI-TOF mass spectrometry
    Jennifer Jähne, Stefanie Herfort, Joerg Doellinger, Peter Lasch, Le Thi Thanh Tam, Rainer Borriss, Joachim Vater
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Phylogenomic analysis of the genus Alcanivorax: proposal for division of this genus into the emended genus Alcanivorax and two novel genera Alloalcanivorax gen. nov. and Isoalcanivorax gen. nov.
    Anusha Rai, Gandham Suresh, Biswas Ria, Vighnesh L, Sreya PK, Sahu Ipsita, Chintalapati Sasikala, Chintalapati Venkata Ramana
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Corynebacterium oculi-related bacterium may act as a pathogen and carrier of antimicrobial resistance genes in dogs: a case report
    Milena Tresch, Christine Watté, Michele Stengard, Corinne Ritter, Isabelle Brodard, Simon Feyer, Estelle Gohl, Ezgi Akdesir, Vincent Perreten, Sonja Kittl
    BMC Veterinary Research.2023;[Epub]     CrossRef
  • Jeongeuplla avenae gen. nov., sp. nov., a novel β-carotene-producing bacterium that alleviates salinity stress in Arabidopsis
    Lingmin Jiang, Yuxin Peng, Ki-Hyun Kim, Doeun Jeon, Hanna Choe, Ah-Reum Han, Cha Young Kim, Jiyoung Lee
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Taxonomic descriptions of Aeromicrobium duanguangcaii sp. nov., Aeromicrobium wangtongii sp. nov. and Aeromicrobium senzhongii sp. nov.
    Lin Ye, Gui Zhang, Jing Yang, Caixin Yang, Yue Liu, Ji Pu, Yuyuan Huang, Sihui Zhang, Dong Jin, Shan Lu, Liyun Liu, Jianguo Xu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Characterization of four novel bacterial species of the genus Sphingomonas, Sphingomonas anseongensis, Sphingomonas alba, Sphingomonas brevis and Sphingomonas hankyongi sp.nov., isolated from wet land
    Muhammad Zubair Siddiqi, Govindan Rajivgandhi, Soon-Youl Lee, Wan-Taek Im
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Neiella litorisoli sp. nov., an alginate lyase: producing bacterium from South China Sea, and proposal of Echinimonadaceae fam. nov. in the order Alteromonadales
    Jing-Ran Sun, Kun-Lian Mo, Xue Li, Yong-Hua Hu, Zhi-Yuan Liu, Hui-Qin Huang
    Archives of Microbiology.2023;[Epub]     CrossRef
  • Paraburkholderia flagellata sp. nov. and Paraburkholderia adhaesiva sp. nov., two novel species isolated from forest soil in Dinghushan Biosphere Reserve in Guangdong, China
    Xiu-yin Guo, Ke-cheng Wu, Cheng-zhi Dong, Qiu-mei Zhang, Li-hong Qiu
    Antonie van Leeuwenhoek.2023; 116(10): 1023.     CrossRef
  • Comparative genomics reveals environmental adaptability and antimicrobial activity of a novel Streptomyces isolated from soil under black Gobi rocks
    Ying Wen, Binglin Zhang, Gaosen Zhang, Minghui Wu, Ximing Chen, Tuo Chen, Guangxiu Liu, Wei Zhang
    Antonie van Leeuwenhoek.2023; 116(12): 1407.     CrossRef
  • Phylotaxonomic assessment based on four core gene sets and proposal of a genus definition among the families Paracoccaceae and Roseobacteraceae
    Dao-Feng Zhang, Wei He, Zongze Shao, Iftikhar Ahmed, Yuqin Zhang, Wen-Jun Li, Zhe Zhao
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Pseudarthrobacter humi sp. nov., an actinobacterium isolated from soil
    Inhyup Kim, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Description of Salinimicrobium tongyeongense sp. nov., isolated from seawater
    Dariimaa Ganbat, Dong-Woo Lee, Seong-Bo Kim, Yong-Jik Lee, Gaewon Nam, Won-Jae Chi, Byoung-Hee Lee, You-Jung Jung, Jung-Sook Lee, Sang-Jae Lee
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Biocontrol potential of bacteria belonging to the Bacillus subtilis group against pests and diseases of agricultural interest through genome exploration
    Gabriela Teodoro Rocha, Paulo Roberto Martins Queiroz, Priscila Grynberg, Roberto Coiti Togawa, Antônia Débora Camila de Lima Ferreira, Izabela Nunes do Nascimento, Ana Cristina Meneses Mendes Gomes, Rose Monnerat
    Antonie van Leeuwenhoek.2023; 116(7): 599.     CrossRef
  • Mesorhizobium liriopis sp. nov., isolated from the fermented fruit of Liriope platyphylla a medicinal plant
    Inhyup Kim, Geeta Chhetri, Yoonseop So, Sunho Park, Yonghee Jung, Haejin Woo, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Tianweitania aestuarii sp. nov., isolated from a coastal dune, reclassification of Corticibacterium populi as Tianweitania populi comb. nov., and emended description of the genus Tianweitania
    Ji Hyeon Song, Sooyeon Park, Jung-Sook Lee, Wonyong Kim, Jung-Hoon Yoon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Roseobacter insulae sp. nov. and Loktanella gaetbuli sp. nov., isolated from tidal flats in the Yellow Sea in Korea
    Eun Bee Lee, Sooyeon Park, Wonyong Kim, Jung-Hoon Yoon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • UFCG: database of universal fungal core genes and pipeline for genome-wide phylogenetic analysis of fungi
    Dongwook Kim, Cameron L M Gilchrist, Jongsik Chun, Martin Steinegger
    Nucleic Acids Research.2023; 51(D1): D777.     CrossRef
  • Bioassay and Whole-Genome Analysis of Bacillus velezensis FIO1408, a Biocontrol Agent Against Pathogenic Bacteria in Aquaculture
    Wenhao Huang, Lingyun Qu, Ping Gao, Guangxun Du
    Current Microbiology.2023;[Epub]     CrossRef
  • VBCG: 20 validated bacterial core genes for phylogenomic analysis with high fidelity and resolution
    Renmao Tian, Behzad Imanian
    Microbiome.2023;[Epub]     CrossRef
  • Neoroseomonas alba sp. nov., Neoroseomonas nitratireducens sp. nov., Paraoseomonas indoligenes sp. nov and Paraoseomonas baculiformis sp. nov., isolated from the rhizosphere of paddy soil
    Yoonseop So, Geeta Chhetri, Inhyup Kim, Jiyoun Kim, Sunho Park, Yonghee Jung, Taegun Seo
    Antonie van Leeuwenhoek.2023; 116(10): 1009.     CrossRef
  • Microbacterium plantarum sp. nov. and Microbacterium thalli sp. nov., two endophytic metal-resistant bacteria isolated from Sphaeralcea angustifolia (Cav.) G. Don and Prosopis laevigata (Humb. et Bonpl. ex Willd) M.C. Johnston
    Ivan Arroyo-Herrera, Brenda Román-Ponce, Rafael Bustamante-Brito, Joseph Guevara-Luna, Violeta Larios-Serrato, Lorena Carro, Jose Mariano Igual, Otto Geiger, Ayixon Sánchez-Reyes, Paulina Estrada-de los Santos, En Tao Wang, María Soledad Vásquez-Murrieta
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Genome insight and probiotic potential of three novel species of the genus Corynebacterium
    Md Shamsuzzaman, Ram Hari Dahal, Shukho Kim, Jungmin Kim
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Marinobacterium lacunae sp. nov. isolated from estuarine sediment
    Srinivas Naga Radha Tanuku, Anil Kumar Pinnaka, Swarnaprava Behera, Aditya Singh, Sudharani Pydi, Gunjan Vasudeva, Bhumika Vaidya, Gunjan Sharma, Sampath Kumar Ganta, Naveen Sagar Garbhapu
    Archives of Microbiology.2023;[Epub]     CrossRef
  • Solicola gregarius gen. nov., sp. nov., a soil actinobacterium isolated after enhanced cultivation with Micrococcus luteus culture supernatant
    Marco A. Lopez Marin, Jachym Suman, Kunal Jani, Pavel Ulbrich, Tomas Cajthaml, Alena Filipova, Petr Pajer, Meina Neumann-Schaal, Michal Strejcek, Ondrej Uhlik
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Draft Genome Sequence of Afifella sp. Strain JA880, Isolated from a Salt Pond
    Jagadeeshwari Uppada, Sasikala Chintalapati, Venkata Ramana Chintalapati, J. Cameron Thrash
    Microbiology Resource Announcements.2023;[Epub]     CrossRef
  • Sphingomonas cremea sp. nov., isolated from ginseng soil
    Yuna Park, Qingzhen Liu, Soohyun Maeng, Hyejin Oh, Chan-Seok Yun, Hanna Choe, Hyang Burm Lee, Wan-Taek Im
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Marixanthotalea marina gen. nov., sp. nov., a bacterium in the family Flavobacteriaceae isolated from seawater
    Zi-Yue Fu, Hua-Peng Xue, Wei He, Guang-Yuan Ma, Ai Hua Zhang, Dao-Feng Zhang, Wen-Jun Li
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Aerococcus agrisoli sp. nov., isolated from paddy soil
    Lina Sun, Wen Qiu, Xinhua Gao, Zechao Cheng, Kaihua Huang, Wei Chen
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Bacillus changyiensis sp. nov., isolated from coastal sediment
    Guiqian Xiao, Qiliang Lai, Guangyu Li, Shanshan Wang, Yunyong Lin, Zongze Shao, Zhong Hu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Whole-genome sequencing of a biocontrol Myxococcus xanthus R31 isolate and comparative genomic analysis
    Honghong Dong, Ruixiang Gao, Yijie Dong, Qing Yao, Honghui Zhu
    Gene.2023; 863: 147286.     CrossRef
  • Comparative biodegradation analysis of three compostable polyesters by a marine microbial community
    Ingrid E. Meyer Cifuentes, Julius Degenhardt, Meina Neumann-Schaal, Nico Jehmlich, David Kamanda Ngugi, Başak Öztürk, Ning-Yi Zhou
    Applied and Environmental Microbiology.2023;[Epub]     CrossRef
  • Leucobacter allii sp. nov. and Leucobacter rhizosphaerae sp. nov., isolated from rhizospheres of onion and garlic, respectively
    Seunghwan Kim, Tomomi Asano, Hanako Naito, Moriyuki Hamada, Hang-Yeon Weon, Soon-Wo Kwon, Jun Heo
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Microcystis pangenome reveals cryptic diversity within and across morphospecies
    Haiyuan Cai, Christopher J. McLimans, Jessica E. Beyer, Lee R. Krumholz, K. David Hambright
    Science Advances.2023;[Epub]     CrossRef
  • Oricola nitratireducens sp. nov., a novel nitrate reducing bacterium isolated from marine sediment in East China Sea
    Chaobo Guo, Xinyu Liu, Feilu Xie, Hong Ding, Shan He, Ning Wang, Weiyan Zhang
    Antonie van Leeuwenhoek.2023; 116(7): 711.     CrossRef
  • Runella salmonicolor sp. nov. and Dyella lutea sp. nov., isolated from paddy field soil
    Sunho Park, Inhyup Kim, Geeta Chhetri, Yoonseop So, Yonghee Jung, Haejin Woo, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Cellulosimicrobium fucosivorans is a later heterotypic synonym of Cellulosimicrobium composti
    Lingmin Jiang, Ho Le Han
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Gymnodinialimonas phycosphaerae sp. nov., a phycosphere bacterium isolated from Karlodinium veneficum
    Yuxin Peng, Lingmin Jiang, Yue Jiang, Jiyoon Seo, Doeun Jeon, Young-Min Kim, Zhun Li, Jiyoung Lee
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Larsenimonas rhizosphaerae sp. nov., isolated from a tidal mudflat
    Soon Dong Lee, In Seop Kim
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Alcanivorax xiamenensis sp. nov., a novel marine hydrocarbonoclastic bacterium isolated from surface seawater
    Qiliang Lai, Xiaoteng Fu, Jianning Wang, Chunming Dong, Liping Wang, Wanpeng Wang, Zongze Shao
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • High-quality full genome assembly of historic Xylella fastidiosa strains from ICMP collection using a hybrid sequencing approach
    Pragya Kant, Natasha Brohier, Rachel Mann, Luciano Rigano, Robert Taylor, Johanna Wong-Bajracharya, Toni A. Chapman, Monica Kehoe, Rebecca Roach, Brendan Rodoni, Fiona Constable, Vincent Michael Bruno
    Microbiology Resource Announcements.2023;[Epub]     CrossRef
  • Comammox Nitrospira and Ammonia-Oxidizing Archaea Are Dominant Ammonia Oxidizers in Sediments of an Acid Mine Lake Containing High Ammonium Concentrations
    Deyong Li, Zhichang Ren, Yangqi Zhou, Lugao Jiang, Min Zheng, Guoqiang Liu, Jennifer B. Glass
    Applied and Environmental Microbiology.2023;[Epub]     CrossRef
  • Combined Omics Approach Reveals Key Differences between Aerobic and Microaerobic Xylene-Degrading Enrichment Bacterial Communities: Rhodoferax─A Hitherto Unknown Player Emerges from the Microbial Dark Matter
    András Táncsics, Sinchan Banerjee, André Soares, Anna Bedics, Balázs Kriszt
    Environmental Science & Technology.2023; 57(7): 2846.     CrossRef
  • Sinomonas cellulolyticus sp. nov., isolated from Loktak lake
    Lhingjakim L. Khongsai, Jagadeeshwari Uppada, Shabbir Ahamad, Sasikala Chintalapati, Venkata Ramana Chintalapati
    Antonie van Leeuwenhoek.2023; 116(12): 1421.     CrossRef
  • Genomic and metabolic insights into the first host-associated isolate of Psychrilyobacter
    Meijia Liu, Guangshan Wei, Qiliang Lai, Zhaobin Huang, Min Li, Zongze Shao, Konstantinos Aristomenis Kormas, Muhamad Amin, Ruixuan Wang
    Microbiology Spectrum.2023;[Epub]     CrossRef
  • Emergence of Raoultella ornithinolytica in human infections from different hospitals in Ecuador with OXA-48-producing resistance
    José E. Villacís, Hugo G. Castelán-Sánchez, Jorge Rojas-Vargas, Ulises E. Rodríguez-Cruz, Viviana Albán, Jorge A. Reyes, Pablo M. Meza-Rodríguez, Sonia Dávila-Ramos, Fernando Villavicencio, Margarita Galarza, Monica C. Gestal
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Pseudodonghicola flavimaris sp. nov. and Sedimentitalea xiamensis sp. nov., two novel species belonging to the family Roseobacteraceae
    Jiamei Huang, Jianning Wang, Guangyu Li, Qiliang Lai, Xuying Zhu, Shanshan Wang, Xiupian Liu, Zongze Shao, Liping Wang
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Phylogeny and structural insights of lipase from Halopseudomonas maritima sp. nov., isolated from sea sand
    Ritu Rani Archana Kujur, Manisha Ghosh, Surajit Basak, Subrata K. Das
    International Microbiology.2023; 26(4): 1021.     CrossRef
  • Spirosoma oryzicola sp. nov., isolated from dried rice husk
    Miyoung Won, Jun Heo, Hang-Yeon Weon, Daseul Lee, Byeong-Hak Han, Seung-Beom Hong, Soon-Wo Kwon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Characterization of metagenome-assembled genomes of two endo-archaea of Candida tropicalis
    Uppada Jagadeeshwari, Chintalapati Sasikala, Anusha Rai, B. Indu, Sahu Ipsita, Chintalapati Venkata Ramana
    Frontiers in Microbiomes.2023;[Epub]     CrossRef
  • Pontibacterium sinense sp. nov., a nitrate-reducing and thiosulphate-oxidizing bacterium, isolated from coastal sediment
    Rui-Ying Chen, Rui-Jie Chen, De-Chen Lu, Ya Gong, Zong-Jun Du
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • UACG: Up-to-Date Archaeal Core Genes and Software for Phylogenomic Tree Reconstruction
    Seong-In Na, Michael James Bailey, Mauricio Chalita, Jae Hyoung Cho, Jongsik Chun
    Journal of Microbiology.2023; 61(7): 683.     CrossRef
  • Nocardioides pini sp. nov. and Nocardioides pinisoli sp. nov., two novel actinomycetes isolated from Pinus densiflora
    Yoonseop So, Geeta Chhetri, Inhyup Kim, Sunho Park, Yonghee Jung, Haejin Woo, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology.2023;[Epub]     CrossRef
  • Lacticaseibacillus huelsenbergensis sp. nov., isolated from grass silage and corn silage
    Monika Grabner F., Monika Grabner H., Hermine Schein, Elisabeth Weidenholzer, Tobias Busche, Christian Rückert-Reed, Marlene Buchebner-Jance
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Desulfovibrio mangrovi sp. nov., a sulfate-reducing bacterium isolated from mangrove sediments: a member of the proposed genus “Psychrodesulfovibrio”
    Jinjie Zhou, Cui-Jing Zhang, Meng Li
    Antonie van Leeuwenhoek.2023; 116(6): 499.     CrossRef
  • Devosia oryzisoli sp. nov., a novel moderately halotolerant bacterium isolated from the roots of rice plants and genome mining revealed the biosynthesis potential as plant growth promoter
    Geeta Chhetri, Inhyup Kim, Taegun Seo
    Antonie van Leeuwenhoek.2023; 116(3): 231.     CrossRef
  • Phosphorus Removal and Storage Polymer Synthesis by Tetrasphaera-Related Bacteria with Different Carbon Sources
    Zhaonian Yu, Shaoyi Xu, Peiliang Wang, Dezhao Liu, Huijie Lu
    ACS ES&T Water.2023; 3(5): 1374.     CrossRef
  • Phycobacter azelaicus gen. nov. sp. nov., a diatom symbiont isolated from the phycosphere of Asterionellopsis glacialis
    Lisa S. Y. Coe, Cong Fei, James Weston, Shady A. Amin
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Fluviispira vulneris sp. nov., isolated from human wound secretions
    Peijuan Tang, Na Peng, Pengwen Ouyang, Sheng Long, Zhenhua Wei, Xingchun Chen, Pinghua Qu, Liangyi Xie
    Antonie van Leeuwenhoek.2023; 116(12): 1305.     CrossRef
  • Revisiting the taxonomy of the genus Rhodopirellula with the proposal for reclassification of the genus to Rhodopirellula sensu stricto, Aporhodopirellula gen. nov., Allorhodopirellula gen. nov. and Neorhodopirellula gen. nov
    Pannikurungottu Sreya, Gandham Suresh, Anusha Rai, Biswas Ria, Lakshmanan Vighnesh, Vaibhav Chandrakant Agre, Uppada Jagadeeshwari, Chintalapati Sasikala, Chintalapati Venkata Ramana
    Antonie van Leeuwenhoek.2023; 116(3): 243.     CrossRef
  • Nocardioides cremeus sp. nov., Nocardioides abyssi sp. nov. and Nocardioides oceani sp. nov., three actinobacteria isolated from Western Pacific Ocean sediment
    Wenjing Wang, Yihan Ding, Shiping Wei, Miaomiao Yin, Gaiyun Zhang
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Gracilimonas sediminicola sp. nov., a moderately halotolerant bacterium isolated from seaweed sediment collected in the East Sea, Republic of Korea
    Yunjeong Lee, Veeraya Weerawongwiwat, Jong-Hwa Kim, Jung-Hoon Yoon, Jung-Sook Lee, Ampaitip Sukhoom, Wonyong Kim
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Peptoniphilus equinus sp. nov., a novel Gram-stain-positive anaerobic coccus isolated from the faeces of a thoroughbred racehorse
    Hye Su Jung, Jeong Ui Yun, Mi-Ja Jung, Hye Seon Song, Yeon Bee Kim, Yujin Kim, Joon-Gyu Kim, Che Ok Jeon, Seong Woon Roh, Tae Woong Whon, Se Hee Lee
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Holtiella tumoricola gen. nov. sp. nov., isolated from a human clinical sample
    Emma Allen-Vercoe, Michelle C. Daigneault, Sarah J. Vancuren, Kyla Cochrane, Lindsey L. O’Neal, Krithivasan Sankaranarayanan, Paul A. Lawson
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Gimibacter soli gen. nov. sp. nov., isolated from mangrove soil and insight into its ecological distribution and metabolic potential
    Yang Liu, Tao Pei, Jiao Duan, Juan Du, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Flavobacterium frigoritolerans sp. nov. and Flavobacterium shii sp. nov., isolated from glaciers on the Tibetan Plateau
    Lei-Lei Yang, Hong-Can Liu, Yu-Hua Xin, Qing Liu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Leucobacter edaphi sp. nov., a highly chromate-tolerant bacterium isolated from chromium containing chemical plant soil
    Bijun Zheng, Zhe Xu, Li Yang, Guangyang Jiang, Jia Chen, Yichen Yang, Yongqiang Tian
    Antonie van Leeuwenhoek.2023; 116(12): 1433.     CrossRef
  • Nitratireductor luteus sp. nov. isolated from saline-alkali land
    Xinping Yang, Liuyan Zhou, Xiaowu Wang, Zhifang Wang, Pengbin Li, Jinping Dai, Huitao Zhang, Yuqing Xie
    Antonie van Leeuwenhoek.2023; 116(3): 221.     CrossRef
  • Melaminivora suipulveris sp. nov., isolated from pigpen dust
    Miyoung Won, Jun Heo, Daseul Lee, Byeong-Hak Han, Seung-Beom Hong, Soon-Wo Kwon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Trinickia violacea sp. nov. and Trinickia terrae sp. nov., isolated from forest soil
    Zeng-hong Gao, Xiu-yin Guo, Yi-zhi Liu, Qiu-mei Zhang, Xin-jie Tong, Li-hong Qiu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Polycladospora coralii gen. nov., sp. nov., a novel member of the family Thermoactinomycetaceae isolated from stony coral in the South China Sea
    Kunlian Mo, Huiqin Huang, Lin Ye, Qingjuan Wu, Yong hua Hu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Comparative genomics and transcriptomics insight into myxobacterial metabolism potentials and multiple predatory strategies
    Chunling Wang, Yi Xiao, Yong Wang, Yumin Liu, Qing Yao, Honghui Zhu
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Acinetobacter thutiue sp. nov. Isolated from Oil-Contaminated Soil in Motorbike Repair Workshops
    Nhan Le Thi Tuyet, Jaisoo Kim
    Diversity.2023; 15(12): 1179.     CrossRef
  • Chryseobacterium edaphi sp. nov. and Chryseobacterium gilvum sp. nov., isolated from soil
    Yonghee Jung, Geeta Chhetri, Inhyup Kim, Yoonseop So, Sunho Park, Haejin Woo, Ki-Ho Lee, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Ten Novel Species Belonging to the Genus Flavobacterium, Isolated from Freshwater Environments: F. praedii sp. nov., F. marginilacus sp. nov., F. aestivum sp. nov., F. flavigenum sp. nov., F. luteolum sp. nov., F. gelatinilyticum sp. nov., F. aquiphilum s
    Hyunyoung Jo, Miri S. Park, Yeonjung Lim, Ilnam Kang, Jang-Cheon Cho
    Journal of Microbiology.2023; 61(5): 495.     CrossRef
  • Description of Flavobacterium agricola sp. nov., an auxin producing bacterium isolated from paddy field
    Shih-Yao Lin, Asif Hameed, Chia-Fang Tsai, Chiu-Chung Young
    Antonie van Leeuwenhoek.2023; 116(12): 1345.     CrossRef
  • Blastopirellula sediminis sp. nov. a new member of Pirellulaceae isolated from the Andaman and Nicobar Islands
    P. K. Sreya, Kumar Gaurav, Shabbir Ahmed, Chintalapati Sasikala, Chintalapati Venkata Ramana
    Antonie van Leeuwenhoek.2023; 116(5): 463.     CrossRef
  • Macromonas nakdongensis sp. nov., Isolated from Freshwater and Characterization of Bacteriophage BK-30P—The First Phage That Infects Genus Macromonas
    Kiwoon Baek, Ahyoung Choi
    Microorganisms.2023; 11(9): 2237.     CrossRef
  • Sphingomonas lycopersici sp. nov., isolated from tomato rhizosphere soil
    Ruixiang Gao, Honghong Dong, Yang Liu, Qing Yao, Huaping Li, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Staphylococcus brunensis sp. nov. isolated from human clinical specimens with a staphylococcal cassette chromosome-related genomic island outside of the rlmH gene bearing the ccrDE r
    Vojtěch Kovařovic, Adéla Finstrlová, Ivo Sedláček, Petr Petráš, Pavel Švec, Ivana Mašlaňová, Meina Neumann-Schaal, Ondrej Šedo, Tibor Botka, Eva Staňková, Jiří Doškař, Roman Pantůček, Shannon D. Manning
    Microbiology Spectrum.2023;[Epub]     CrossRef
  • The Raphidiopsis (= Cylindrospermopsis) raciborskii pangenome updated: Two new metagenome-assembled genomes from the South American clade
    Marcele Laux, Carlos Morais Piroupo, João Carlos Setubal, Alessandra Giani
    Harmful Algae.2023; 129: 102518.     CrossRef
  • Marivirga aurantiaca sp. nov., a halophilic nitrite-reducing bacterium, isolated from intertidal surface sediments
    Mingxia Zhang, Yulian Zhang, Qing Yao, Fan Yang, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Agromyces chromiiresistens sp. nov., Novosphingobium album sp. nov., Sphingobium arseniciresistens sp. nov., Sphingomonas pollutisoli sp. nov., and Salinibacterium metalliresistens sp. nov.: five new members of Microbacteriaceae and Sphingomonadaceae from
    Ze-Shen Liu, Ke-Huan Wang, Man Cai, Mei-Ling Yang, Xiao-Kang Wang, Hong-Lin Ma, Yi-Han Yuan, Lin-Huan Wu, De-Feng Li, Shuang-Jiang Liu
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Sphingomonas oryzagri sp. nov., isolated from a rice field
    Md. Amdadul Huq, Sun-Young Lee, Md. Shahedur Rahman, Shahina Akter
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Tsuneonella litorea sp. nov., a novel carotenoid-producing bacterium isolated from coastal sediment
    Yizhou He, Yang Liu, Tao Pei, Jiao Duan, Juan Du, Xiaoqin Deng, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Gramella oceanisediminis sp. nov., isolated from deep-sea sediment of the Indian Ocean
    Lin Yang, Haolei Shi, Qian Li, Minggang Zheng, Qiliang Lai, Li Zheng
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Pseudomonas petrae sp. nov. isolated from regolith samples in Antarctica
    Dana Nováková, Vendula Koublová, Karel Sedlář, Eva Staňková, Stanislava Králová, Pavel Švec, Meina Neumann-Schaal, Jacqueline Wolf, Sylva Koudelková, Miloš Barták, Ivo Sedláček
    Systematic and Applied Microbiology.2023; 46(4): 126424.     CrossRef
  • Paraflavisolibacter caeni gen. nov., sp. nov., a novel taxon within the family Chitinophagaceae isolated from sludge
    Cansheng Yuan, Bin Liu, Lin Wang, Weihua Long, Zhuang Ke, Jian He
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Shimia ponticola sp. nov., an aerobic anoxygenic photoheterotrophic bacterium, isolated from surface seawater in the South China Sea
    Qi Chen, Bowen He, Ta-Hui Lin, Nianzhi Jiao, Qiang Zheng
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • From sequences to species: Charting the phytoplasma classification and taxonomy in the era of taxogenomics
    Kiran Kirdat, Bhavesh Tiwarekar, Shivaji Sathe, Amit Yadav
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Thermobacterium salinum gen. nov., sp. nov., a novel member of the family Flavobacteriaceae isolated from a hydrothermal zone
    Beihan Chen, Haichen Zhang, Dan Lin, Jianing Ye, Kai Tang
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Phenotypic and Genomic Characterization of Streptomyces pakalii sp. nov., a Novel Species with Anti-Biofilm and Anti-Quorum Sensing Activity in ESKAPE Bacteria
    Michelle Chávez-Hernández, Jossue Ortiz-Álvarez, Jesús Morales-Jiménez, Lourdes Villa-Tanaca, César Hernández-Rodríguez
    Microorganisms.2023; 11(10): 2551.     CrossRef
  • Dyella humicola sp. nov., Dyella subtropica sp. nov., Dyella silvatica sp. nov. and Dyella silvae sp. nov., isolated from subtropical forest soil
    Guang-Da Feng, Xiaoqin Deng, Jiali Li, Wendi Chen, Xianjiao Zhang, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Hufsiella ginkgonis gen. nov., sp. nov. and Hufsiella arboris sp. nov., isolated from tree barks
    Heeyoung Kang, Seokhyeon Bae, Haneul Kim, Kiseong Joh
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Description ofDefluviimonas salinarumsp. nov. with the potential of benzene-degradation isolated from saltern in the Yellow Seacoast
    Yunjeong Lee, Jong-Hwa Kim, Jung-Hoon Yoon, Jung-Sook Lee, Ampaitip Sukhoom, Wonyong Kim
    FEMS Microbiology Letters.2023;[Epub]     CrossRef
  • Genomic potential for inorganic carbon sequestration and xenobiotic degradation in marine bacterium Youngimonas vesicularis CC-AMW-ET affiliated to family Paracoccaceae
    Asif Hameed, Kokkarambath Vannadil Suchithra, Shih-Yao Lin, Paul Stothard, Chiu-Chung Young
    Antonie van Leeuwenhoek.2023; 116(11): 1247.     CrossRef
  • Polyphasic Characterization and Genomic Insights into an Aerobic Denitrifying Bacterium, Shewanella zhuhaiensis sp. nov., Isolated from a Tidal Flat Sediment
    Yang Liu, Tao Pei, Juan Du, Honghui Zhu
    Microorganisms.2023; 11(12): 2870.     CrossRef
  • Pseudomonas quebecensis sp. nov., a bacterium isolated from root-zone soil of a native legume, Amphicarpaea bracteata (L.) Fernald, in Quebec, Canada
    James T. Tambong, Renlin Xu, Sylvia I. Chi, Isabelle Birugu, Sylvia Bachelet, Conrad Hutter, Marc-Olivier Duceppe, Stephan Brière
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Taxogenomics of Alkalihalobacterium chitinilyticum sp. nov.: an alkaliphilic chitin degrading bacterial strain isolated from Lonar Lake, India, with potential biotechnological applications
    Sonia Thite, Kamakshi Tarwadge, Purva Mengade, Tushar Lodha, Neetha Joseph, Lucky Thakkar, Amaraja Joshi
    Antonie van Leeuwenhoek.2023; 116(11): 1103.     CrossRef
  • Characterization of two novel chemolithoautotrophic bacteria of Sulfurovum from marine coastal environments and further comparative genomic analyses revealed species differentiation among deep-sea hydrothermal vent and non-vent origins
    Jun Wang, Qiang Zheng, Shasha Wang, Jialing Zeng, Qing Yuan, Yangsheng Zhong, Lijing Jiang, Zongze Shao
    Frontiers in Marine Science.2023;[Epub]     CrossRef
  • Pseudomonas citri sp. nov., a potential novel plant growth promoting bacterium isolated from rhizosphere soil of citrus
    Hong Gao, Guang-Da Feng, Zengwei Feng, Qing Yao, Jiali Li, Xiaoqin Deng, Xiaoran Li, Honghui Zhu
    Antonie van Leeuwenhoek.2023; 116(3): 281.     CrossRef
  • Pontibacter liquoris sp. nov. and Pontibacter vulgaris sp. nov., two novel bacteria isolated from the pit mud of Chinese liquor
    Chaobo Guo, Haohao Wang, Xinyu Liu, Yifan Guo, Shan He, Lijian Ding, Weiyan Zhang
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Pseudophaeobacter profundi sp. nov., isolated from the Western Pacific Ocean
    Xuying Zhu, Liping Wang, Qiliang Lai, Jianning Wang, Jiamei Huang, Guangyu Li, Lingyu Zeng, Jingyu Xia, Zongze Shao
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Physiological and genomic analyses of cobalamin (vitamin B12)-auxotrophy of Lysobacter auxotrophicus sp. nov., a methionine-auxotrophic chitinolytic bacterium isolated from chitin-treated soil
    Akihiro Saito, Hideo Dohra, Moriyuki Hamada, Ryota Moriuchi, Yohei Kotsuchibashi, Koji Mori
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Hyperactive nanobacteria with host-dependent traits pervade Omnitrophota
    Cale O. Seymour, Marike Palmer, Eric D. Becraft, Ramunas Stepanauskas, Ariel D. Friel, Frederik Schulz, Tanja Woyke, Emiley Eloe-Fadrosh, Dengxun Lai, Jian-Yu Jiao, Zheng-Shuang Hua, Lan Liu, Zheng-Han Lian, Wen-Jun Li, Maria Chuvochina, Brianna K. Finley
    Nature Microbiology.2023; 8(4): 727.     CrossRef
  • Genome-resolved metagenomics provides insights into the microbial-mediated sulfur and nitrogen cycling in temperate seagrass meadows
    Pengyuan Liu, Songbao Zou, Haikun Zhang, Qing Liu, Zenglei Song, Yanyan Huang, Xiaoke Hu
    Frontiers in Marine Science.2023;[Epub]     CrossRef
  • ComammoxNitrospirabacteria outnumber canonical nitrifiers irrespective of electron donor mode and availability in biofiltration systems
    Katherine J Vilardi, Irmarie Cotto, Maria Sevillano, Zihan Dai, Christopher L Anderson, Ameet Pinto
    FEMS Microbiology Ecology.2022;[Epub]     CrossRef
  • Glycoside hydrolase subfamily GH5_57 features a highly redesigned catalytic interface to process complex hetero-β-mannans
    Marcele P. Martins, Mariana A. B. Morais, Gabriela F. Persinoti, Rafael H. Galinari, Li Yu, Yoshihisa Yoshimi, Fernanda B. Passos Nunes, Tatiani B. Lima, Shayla F. Barbieri, Joana L. M. Silveira, Vincent Lombard, Nicolas Terrapon, Paul Dupree, Bernard Hen
    Acta Crystallographica Section D Structural Biology.2022; 78(11): 1358.     CrossRef
  • Alexandriicola marinus gen. nov., sp. nov., a new member of the family Rhodobacteraceae isolated from marine phycosphere
    Wen-Zhuo Zhu, Hui-Min Gao, Ya-Ming Ge, Jun Dai, Xi Yang, Xiao-Ling Zhang, Qiao Yang
    Antonie van Leeuwenhoek.2022; 115(4): 473.     CrossRef
  • In silico, in vitro and in vivo safety evaluation of Limosilactobacillus reuteri strains ATCC PTA-126787 & ATCC PTA-126788 for potential probiotic applications
    Dharanesh Gangaiah, Shrinivasrao P. Mane, Nilesh R. Tawari, Nallakannu Lakshmanan, Valerie Ryan, Alyssa Volland, Dwi Susanti, Milind Patel, Abraham Abouzeid, Emily B. Helmes, Arvind Kumar, Konstantinos Papadimitriou
    PLOS ONE.2022; 17(1): e0262663.     CrossRef
  • Alicyclobacillus curvatus sp. nov. and Alicyclobacillus mengziensis sp. nov., two acidophilic bacteria isolated from acid mine drainage
    Zhen Jiang, Dildar Wu, Zong-Lin Liang, Xiu-Tong Li, Ye Huang, Nan Zhou, Zheng-Hua Liu, Guang-Ji Zhang, Yan Jia, Hua-Qun Yin, Shuang-Jiang Liu, Cheng-Ying Jiang
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Genome-based taxonomic classification of the closest-to-Comamonadaceae group supports a new family Sphaerotilaceae fam. nov. and taxonomic revisions
    Yang Liu, Juan Du, Tao Pei, Hanqin Du, Guang-Da Feng, Honghui Zhu
    Systematic and Applied Microbiology.2022; 45(6): 126352.     CrossRef
  • Paraphocaeicola brunensis gen. nov., sp. nov., Carrying Two Variants of nimB Resistance Gene from Bacteroides fragilis, and Caecibacteroides pullorum gen. nov., sp. nov., Two Novel G
    Stanislava Kralova, Lenka Davidova-Gerzova, Adam Valcek, Matej Bezdicek, Ivan Rychlik, Veronika Rezacova, Alois Cizek, Jeffrey A. Gralnick
    Microbiology Spectrum.2022;[Epub]     CrossRef
  • Antrihabitans stalagmiti sp. nov., isolated from a larva cave and a proposal to transfer Rhodococcus cavernicola Lee et al. 2020 to a new genus Spelaeibacter as Spelaeibacter cavernicola gen. nov. comb. nov
    Sung-Min Kim, Soon Dong Lee, Young Sang Koh, In Seop Kim
    Antonie van Leeuwenhoek.2022; 115(4): 521.     CrossRef
  • Sphingopyxis lutea sp. nov., a novel moderately halotolerant bacterium isolated from pebbles
    Geeta Chhetri, Inhyup Kim, Taegun Seo
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Nocardioides nematodiphilus sp. nov., isolated from rhizosphere of Arabidopsis thaliana
    Xue-Mei Zhang, Wan-Ting Mo, Yu-Qian Wei, Xin Li, Gui-Mei Ma, Yu-Sen Yang, Xue-Jian Wang, Jian-Jin Liu, Zi-Yi Liu, Xing-Kui Zhou, Ti-Kun Zhang
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Sedimentimonas flavescens gen. nov., sp. nov., isolated from sediment of Clam Island, Liaoning Province
    Lulu Mu, Xueping Zhang, Yanfeng Zhang, Zemin Fang, Yazhong Xiao
    Antonie van Leeuwenhoek.2022; 115(8): 979.     CrossRef
  • Pseudomonas oligotrophica sp. nov., a Novel Denitrifying Bacterium Possessing Nitrogen Removal Capability Under Low Carbon–Nitrogen Ratio Condition
    Mingxia Zhang, Anzhang Li, Qing Yao, Botao Xiao, Honghui Zhu
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Panacibacter microcysteis sp. nov., isolated from a eutrophic reservoir during the Microcystis bloom period
    Ve Van Le, So-Ra Ko, Mingyeong Kang, Sang-Ah Lee, Hee-Mock Oh, Chi-Yong Ahn
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Ruegeria alba sp. nov., Isolated from a Tidal Flat Sediment
    Juan Du, Yang Liu, Tao Pei, Anzhang Li, Honghui Zhu
    Current Microbiology.2022;[Epub]     CrossRef
  • Larkinella humicola sp. nov., a gamma radiation-resistant bacterium isolated from soil
    Yuna Park, Leonid N. Ten, Young Koung Lee, Hee‑Young Jung, Myung Kyum Kim
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Oral and gut dysbiosis leads to functional alterations in Parkinson’s disease
    Sungyang Jo, Woorim Kang, Yun Su Hwang, Seung Hyun Lee, Kye Won Park, Mi Sun Kim, Hyunna Lee, Hyung Jeong Yoon, Yoo Kyoung Park, Mauricio Chalita, Je Hee Lee, Hojun Sung, Jae-Yun Lee, Jin-Woo Bae, Sun Ju Chung
    npj Parkinson's Disease.2022;[Epub]     CrossRef
  • Colwellia maritima sp. nov. and Polaribacter marinus sp. nov., isolated from seawater
    Sylvia Kristyanto, Jaejoon Jung, Jeong Min Kim, Keunpil Kim, Mi-hwa Lee, Lujiang Hao, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Hymenobacter translucens sp. nov. and Hymenobacter pini sp. nov. isolated from soil
    Minji Bang, Myung Kyum Kim, Hee‑Young Jung
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Chryseobacterium subflavum sp. nov., isolated from soil
    Delong Kong, Yan Wang, Qingqing Li, Yanzheng Zhou, Xu Jiang, Zhen Xing, Zhiye Wang, Zhiyong Ruan
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Acetobacter vaccinii sp. nov., a novel acetic acid bacterium isolated from blueberry fruit (Vaccinium corymbosum L.)
    Jun Heo, Atena Sadat Sombolestani, David Laureys, Jessika De Clippeleer, Miyoung Won, Peter Vandamme, Soon-Wo Kwon
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Neotabrizicola shimadae gen. nov., sp. nov., an aerobic anoxygenic phototrophic bacterium harbouring photosynthetic genes in the family Rhodobacteraceae, isolated from a terrestrial hot spring
    So Muramatsu, Setsuko Hirose, Takao Iino, Moriya Ohkuma, Satoshi Hanada, Shin Haruta
    Antonie van Leeuwenhoek.2022; 115(6): 731.     CrossRef
  • Pedomonas mirosovicensis gen. nov., sp. nov., a bacterium isolated from soil with the aid of Micrococcus luteus culture supernatant containing resuscitation-promoting factor
    Marco A. Lopez Marin, Jachym Suman, Kunal Jani, Pavel Ulbrich, Tomas Cajthaml, Petr Pajer, Jacqueline Wolf, Meina Neumann-Schaal, Michal Strejcek, Ondrej Uhlik
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Streptococcus oriscaviae sp. nov. Infection Associated with Guinea Pigs
    Jade L. L. Teng, Yuanchao Ma, Jonathan H. K. Chen, Ruibang Luo, Chuen-Hing Foo, Tsz Tuen Li, Jordan Y. H. Fong, Weiming Yao, Samson S. Y. Wong, Kitty S. C. Fung, Susanna K. P. Lau, Patrick C. Y. Woo, Jasna Kovac
    Microbiology Spectrum.2022;[Epub]     CrossRef
  • Paracidobacterium acidisoli gen. nov., sp. nov. and Alloacidobacterium dinghuense gen. nov., sp. nov., two acidobacteria isolated from forest soil, and reclassification of Acidobacterium ailaaui and Acidipila dinghuensis as Pseudacidobacteriu
    Qiu-mei Zhang, Jia-cheng Fu, Zhi-qin Chen, Li-hong Qiu
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Non‐ribosomal peptide biosynthetic potential of the nematode symbiont Photorhabdus
    Ao‐Qi Du, Ti‐Ti Ying, Zhen‐Yi Zhou, Wen‐Chao Yu, Gang‐Ao Hu, Xian Luo, Man‐Jing Ma, Yan‐Lei Yu, Hong Wang, Bin Wei
    Environmental Microbiology Reports.2022; 14(6): 917.     CrossRef
  • Chryseobacterium oryzae sp. nov. and Chryseobacterium suipulveris sp. nov., isolated from Andong sikhye and pigpen dust, respectively
    Jun Heo, Miyoung Won, Daseul Lee, Jeong-Seon Kim, Byeong-Hak Han, Soo-Jin Kim, Seung-Beom Hong, Soon-Wo Kwon
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Metagenomic evidence of a novel family of anammox bacteria in a subsea environment
    Carolina Suarez, Paula Dalcin Martins, Mike S.M. Jetten, Sabina Karačić, Britt Marie Wilén, Oskar Modin, Per Hagelia, Malte Hermansson, Frank Persson
    Environmental Microbiology.2022; 24(5): 2348.     CrossRef
  • Evolutionary Principles of Bacterial Signaling Capacity and Complexity
    Ran Mo, Yugeng Liu, Yuanyuan Chen, Yingjin Mao, Beile Gao, Qijing Zhang
    mBio.2022;[Epub]     CrossRef
  • Pseudomonas phenolilytica sp. nov., a novel phenol-degrading bacterium
    Ritu Rani Archana Kujur, Subrata K. Das
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Pontibacter pamirensis sp. nov., isolated from saline-alkaline soil
    Fang Liu, Yang-Yang Liu, Yu-Qian Li, Rui-Feng Lei, Qin Ma, Dilireba Abudourousuli, Zulihumaer Rouzi, Muyesaier Aosiman, Deng-Di An, Wen-Jun Li
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Limosilactobacillus reuteri DS0384 promotes intestinal epithelial maturation via the postbiotic effect in human intestinal organoids and infant mice
    Hana Lee, Kwang Bo Jung, Ohman Kwon, Ye Seul Son, Eunho Choi, Won Dong Yu, Naeun Son, Jun Hyoung Jeon, Hana Jo, Haneol Yang, Yeong Rak Son, Chan-Seok Yun, Hyun-Soo Cho, Sang Kyu Kim, Dae-Soo Kim, Doo-Sang Park, Mi-Young Son
    Gut Microbes.2022;[Epub]     CrossRef
  • Some like it cold: the cellular organization and physiological limits of cold‐tolerant nitrite‐oxidizing Nitrotoga
    Sabine Keuter, Hanna Koch, Katharina Sass, Simone Wegen, Natuschka Lee, Sebastian Lücker, Eva Spieck
    Environmental Microbiology.2022; 24(4): 2059.     CrossRef
  • Horticoccus luteus gen. nov., sp. nov., A Novel Member of the Phylum Verrucomicrobia Isolated from a Dichlorodiphenyltrichloroethane (DDT)-Contaminated Orchard Soil
    Joon-hui Chung, Ja-Yeon Lee, Geun-Hyung Choi, Miyoung Won, Jehyeong Yeon, Younggun Yoon, Si-Hyun An, Da-Yeon Kim, InCheol Park, Ye-eun Kim, Jae-Hyung Ahn
    Current Microbiology.2022;[Epub]     CrossRef
  • Burkholderia orbicola sp. nov., a novel species within the Burkholderia cepacia complex
    Leslie-Mariana Morales-Ruíz, Mariana Rodríguez-Cisneros, Jeniffer-Chris Kerber-Díaz, Fernando-Uriel Rojas-Rojas, J. Antonio Ibarra, Paulina Estrada-de los Santos
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Assessing the utility of mitochondrial gene markers in the family Suessiaceae (Dinophyta) with phylogenomic validation
    Se Hyeon Jang, Seong In Na, Moo Joon Lee, Yeong Du Yoo
    Molecular Phylogenetics and Evolution.2022; 177: 107625.     CrossRef
  • Taxonomic and Bioactivity Characterizations of Mameliella alba Strain LZ-28 Isolated from Highly Toxic Marine Dinoflagellate Alexandrium catenella LZT09
    Cheng-Zhe Ren, Hui-Min Gao, Jun Dai, Wen-Zhuo Zhu, Fei-Fei Xu, Yun Ye, Xiao-Ling Zhang, Qiao Yang
    Marine Drugs.2022; 20(5): 321.     CrossRef
  • Nocardioides panacis sp. nov., isolated from soil of a ginseng field
    Yuna Park, Qingzhen Liu, Soohyun Maeng, Won Jung Choi, Yoonjee Chang, Wan-Taek Im
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Water quality drives the distribution of freshwater cable bacteria
    Meijun Dong, Shan Yang, Xunan Yang, Meiying Xu, Wenzhe Hu, Bin Wang, Youda Huang, Jiarou Xu, Huibin Lu, Yonggang Yang, Xingjuan Chen, Haobin Huang, Guoping Sun
    Science of The Total Environment.2022; 841: 156468.     CrossRef
  • Vibrio ostreae sp. nov., a novel gut bacterium isolated from a Yellow Sea oyster
    Neak Muhammad, Tra T.H. Nguyen, Yong-Jae Lee, Jaeho Ko, Forbes Avila, Song-Gun Kim
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Flavobacterium endoglycinae sp. nov., an endophytic bacterium isolated from soybean (Glycine max L. cv. Gwangan) stems
    Jiyoon Seo, Yuxin Peng, Lingmin Jiang, Sang-Beom Lee, Rae-Dong Jeong, Soon Ju Park, Cha Young Kim, Man-Soo Choi, Jiyoung Lee
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Draft Genome Sequence of Methanobacterium paludis IBT-C12, Recovered from Sediments of the Apatlaco River, Mexico
    Erick Alejandro Sánchez-Salazar, Lizbeth Hernández-Jaimes, Luz Breton-Deval, Ayixon Sánchez-Reyes, Frank J. Stewart
    Microbiology Resource Announcements.2022;[Epub]     CrossRef
  • Successful Direct Whole Genome Sequencing and Revivification of Freeze-Dried Nontuberculous Mycobacteria after More than Half a Century of Storage
    Xenia Emilie Sinding Iversen, Anders Norman, Dorte Bek Folkvardsen, Erik Svensson, Erik Michael Rasmussen, Troels Lillebaek, Sébastien P. Faucher
    Microbiology Spectrum.2022;[Epub]     CrossRef
  • Bacterial filamentation as a mechanism for cell-to-cell spread within an animal host
    Tuan D. Tran, Munira Aman Ali, Davin Lee, Marie-Anne Félix, Robert J. Luallen
    Nature Communications.2022;[Epub]     CrossRef
  • Greater functional diversity and redundancy of coral endolithic microbiomes align with lower coral bleaching susceptibility
    Anny Cárdenas, Jean-Baptiste Raina, Claudia Pogoreutz, Nils Rädecker, Jeremy Bougoure, Paul Guagliardo, Mathieu Pernice, Christian R Voolstra
    The ISME Journal.2022; 16(10): 2406.     CrossRef
  • Comparative Genomics Reveal the Animal-Associated Features of the Acanthopleuribacteraceae Bacteria, and Description of Sulfidibacter corallicola gen. nov., sp., nov.
    Guanghua Wang, Yuanjin Li, Jianfeng Liu, Biao Chen, Hongfei Su, Jiayuan Liang, Wen Huang, Kefu Yu
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Dyella sedimenti sp. nov., Isolated from the Sediment of a Winery
    Li Gao, Yuan-Dong Li, Xing-Kui Zhou, Xiu-Ming Liu, Hui-Tian Li, Wen-Jun Li, Yan-Qing Duan
    Current Microbiology.2022;[Epub]     CrossRef
  • Arenibacterium arenosum sp. nov., isolated from sea sand
    Jiseon Jeong, Veeraya Weerawongwiwat, Jong-Hwa Kim, Min Kuk Suh, Han Sol Kim, Jung-Sook Lee, Jung-Hoon Yoon, Ampaitip Sukhoom, Wonyong Kim
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Gordonia pseudamarae sp. nov., a home for novel actinobacteria isolated from stable foams on activated sludge wastewater treatment plants
    Raúl Riesco, Jayson J. A. Rose, Steven Batinovic, Steve Petrovski, Fernando Sánchez-Juanes, Robert J. Seviour, Michael Goodfellow, Martha E. Trujillo
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Predicting butyrate- and propionate-forming bacteria of gut microbiota from sequencing data
    Berenike Kircher, Sabrina Woltemate, Frank Gutzki, Dirk Schlüter, Robert Geffers, Heike Bähre, Marius Vital
    Gut Microbes.2022;[Epub]     CrossRef
  • Kaistella soli sp. nov., isolated from oil-contaminated experimental soil
    Dhiraj Kumar Chaudhary, Ram Hari Dahal, Joung-Ho Park, Yongseok Hong
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Halomonas salinarum sp. nov., a moderately halophilic bacterium isolated from saline soil in Yingkou, China
    Ya-Lin Yin, Fang-Ling Li, Lei Wang
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Neoroseomonas marina sp. nov., Isolated from a Beach Sand
    Anusha Rai, Jagadeeshwari Uppada, Deepshikha Gupta, Smita Nandardhane, Ipsita Sahu, Sasikala Chintalapati, Venkata Ramana Chintalapati
    Current Microbiology.2022;[Epub]     CrossRef
  • Paenibacillus albicereus sp. nov. and Niallia alba sp. nov., isolated from digestive syrup
    Vipool Thorat, Kiran Kirdat, Bhavesh Tiwarekar, Priyanka Dhanavade, Prachi Karodi, Yogesh Shouche, Shivaji Sathe, Tushar Lodha, Amit Yadav
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Identification of Mucilaginibacter conchicola sp. nov., Mucilaginibacter achroorhodeus sp. nov. and Mucilaginibacter pallidiroseus sp. nov. and emended description of the genus Mucilaginibacter
    Jiyoun Kim, Byungjo Lee, Geeta Chhetri, Inhyup Kim, Yoonseop So, Wonhee Jang, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Pusillimonas faecipullorum sp. nov., isolated from the poultry manure
    Shih-Yao Lin, Asif Hameed, Chia-Fang Tsai, Yu-Shan Tang, Chiu-Chung Young
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Unveiling the genomic potential of Pseudomonas type strains for discovering new natural products
    Zaki Saati-Santamaría, Nelly Selem-Mojica, Ezequiel Peral-Aranega, Raúl Rivas, Paula García-Fraile
    Microbial Genomics .2022;[Epub]     CrossRef
  • A genomic overview including polyphasic taxonomy of Thalassoroseus pseudoceratinae gen. nov., sp. nov. isolated from a marine sponge, Pseudoceratina sp.
    Gaurav Kumar, Uppada Jagadeeshwari, Pannikurungottu Sreya, Ahmed Shabbir, Chintalapati Sasikala, Chintalapati Venkata Ramana
    Antonie van Leeuwenhoek.2022; 115(7): 843.     CrossRef
  • Novosphingobium percolationis sp. nov. and Novosphingobium huizhouense sp. nov., isolated from landfill leachate of a domestic waste treatment plant
    Xiaoling He, Huibin Lu, Wenzhe Hu, Tongchu Deng, Xiaofan Gong, Xunan Yang, Da Song, Mei He, Meiying Xu
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Development of a Novel Real-Time Polymerase Chain Reaction Assay to DetectEscherichia albertiiin Chicken Meat
    Sakura Arai, Tadasuke Ooka, Mizuha Shibata, Yuhki Nagai, Yuki Tokoi, Hiromi Nagaoka, Rika Maeda, Akihiko Tsuchiya, Yuka Kojima, Kenji Ohya, Takahiro Ohnishi, Noriko Konishi, Kayoko Ohtsuka, Yukiko Hara-Kudo
    Foodborne Pathogens and Disease.2022; 19(12): 823.     CrossRef
  • Psychroflexus curvus sp. nov., Psychroflexus longus sp. nov. and Psychroflexus montanilacus sp. nov., isolated from salt lakes on the Tibetan Plateau
    Huibin Lu, Peixin Gao, Dorji Phurbu, Qinglong Wu, Peng Xing
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Tumebacillus amylolyticus sp. nov., isolated from garden soil in Korea
    Minchung Kang, Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Yoonseop So, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Description of Polaribacter batillariae sp. nov., Polaribacter cellanae sp. nov., and Polaribacter pectinis sp. nov., novel bacteria isolated from the gut of three types of South Korean shellfish
    Su-Won Jeong, Jeong Eun Han, June-Young Lee, Ji-Ho Yoo, Do-Yeon Kim, In Chul Jeong, Jee-Won Choi, Yun-Seok Jeong, Jae-Yun Lee, So-Yeon Lee, Euon Jung Tak, Hojun Sung, Hyun Sik Kim, Pil Soo Kim, Dong-Wook Hyun, Jin-Woo Bae
    Journal of Microbiology.2022; 60(6): 576.     CrossRef
  • Survival strategy of comammox bacteria in a wastewater nutrient removal system with sludge fermentation liquid as additional carbon source
    Shaoyi Xu, Wenbo Chai, Rui Xiao, Barth F. Smets, Alejandro Palomo, Huijie Lu
    Science of The Total Environment.2022; 802: 149862.     CrossRef
  • Hymenobacter armeniacus sp. nov. and Hymenobacter montanus sp. nov., two radiation-resistant bacteria from soil
    Yuna Park, Yoonjee Chang, Myung Kyum Kim
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Hymenobacter telluris sp. nov., isolated from soil in South Korea
    Tuvshinzaya Damdintogtokh, Yuna Park, Soohyun Maeng, Hye Jin Oh, Minji Bang, Young Koung Lee, Jaesung Oh, Jaewoo Bai, Myung Kyum Kim
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Ferruginibacter albus sp. nov., isolated from a mountain soil, and Mucilaginibacter robiniae sp. nov., isolated from a black locust flower, Robinia pseudoacacia
    Miyoung Won, Hang-Yeon Weon, Jun Heo, Daseul Lee, Byeong-Hak Han, Seung-Beom Hong, Soon-Wo Kwon
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Beyond the ABCs—Discovery of Three New Plasmid Types in Rhodobacterales (RepQ, RepY, RepW)
    Heike M. Freese, Victoria Ringel, Jörg Overmann, Jörn Petersen
    Microorganisms.2022; 10(4): 738.     CrossRef
  • Comparative Genomic Analyses of the Genus Photobacterium Illuminate Biosynthetic Gene Clusters Associated with Antagonism
    Nyok-Sean Lau, Wooi Liang Heng, Noorizan Miswan, Nor Azura Azami, Go Furusawa
    International Journal of Molecular Sciences.2022; 23(17): 9712.     CrossRef
  • Comparative Genomic Analysis of Fusobacterium necrophorum Provides Insights into Conserved Virulence Genes
    Prabha K. Bista, Deepti Pillai, Chayan Roy, Joy Scaria, Sanjeev K. Narayanan, Philip N. Rather
    Microbiology Spectrum.2022;[Epub]     CrossRef
  • Shewanella sp. T2.3D-1.1 a Novel Microorganism Sustaining the Iron Cycle in the Deep Subsurface of the Iberian Pyrite Belt
    Guillermo Mateos, Adrián Martínez Bonilla, Sofía de Francisco de Polanco, José M. Martínez, Cristina Escudero, Nuria Rodríguez, Irene Sánchez-Andrea, Ricardo Amils
    Microorganisms.2022; 10(8): 1585.     CrossRef
  • Devosia rhizoryzae sp. nov., and Devosia oryziradicis sp. nov., novel plant growth promoting members of the genus Devosia, isolated from the rhizosphere of rice plants
    Geeta Chhetri, Inhyup Kim, Minchung Kang, Jiyoun Kim, Yoonseop So, Taegun Seo
    Journal of Microbiology.2022; 60(1): 1.     CrossRef
  • Nocardioides carbamazepini sp. nov., an ibuprofen degrader isolated from a biofilm bacterial community enriched on carbamazepine
    Tibor Benedek, Márton Pápai, Kholood Gharieb, Anna Bedics, András Táncsics, Erika Tóth, Hussein Daood, Gergely Maróti, Roland Wirth, Ofir Menashe, Károly Bóka, Balázs Kriszt
    Systematic and Applied Microbiology.2022; 45(4): 126339.     CrossRef
  • Agrilactobacillus fermenti sp. nov. isolated from fermented vegetable residue
    Shih-Yao Lin, Asif Hameed, Chia-Fang Tsai, Mei-Hua Hung, Chiu-Chung Young
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Genomic Insights into the Radiation-Resistant Capability of Sphingomonas qomolangmaensis S5-59T and Sphingomonas glaciei S8-45T, Two Novel Bacteria from the North Slope of Mount Everest
    Yang Liu, Xiaowen Cui, Ruiqi Yang, Yiyang Zhang, Yeteng Xu, Guangxiu Liu, Binglin Zhang, Jinxiu Wang, Xinyue Wang, Wei Zhang, Tuo Chen, Gaosen Zhang
    Microorganisms.2022; 10(10): 2037.     CrossRef
  • In silico, in vitro and in vivo characterization of host-associated Latilactobacillus curvatus strains for potential probiotic applications in farmed Atlantic salmon (Salmo salar)
    Hannah S. Cathers, Shrinivasrao P. Mane, Nilesh R. Tawari, Jayanth Balakuntla, Germán Plata, Madan Krishnamurthy, Alicia MacDonald, Marilyn Wolter, Niel Baxter, Julian Briones, Akshitha Nagireddy, Gregory Millman, Roberto E. Martin, Arvind Kumar, Dharanes
    Scientific Reports.2022;[Epub]     CrossRef
  • Rahnella sikkimica sp. nov., a novel cold-tolerant bacterium isolated from the glacier of Sikkim Himalaya with plant growth-promoting properties
    Anil Kumar, Anne Le Flèche-Matéos, Rakshak Kumar, Fabienne Lomprez, Frédéric Fichenick, Dharam Singh, Patrick A. D. Grimont, Sanjay Kumar
    Extremophiles.2022;[Epub]     CrossRef
  • Hydrogenophaga crocea sp. nov. associated with cyanobacterial mat isolated from farmland mud
    Vipool Thorat, Bhavesh Tiwarekar, Kiran Kirdat, Saurabhee Chavan, Shital Markad, Shivaji Sathe, Tushar Lodha, Amit Yadav
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Genome mining revealed polyhydroxybutyrate biosynthesis by Ramlibacter agri sp. nov., isolated from agriculture soil in Korea
    Ram Hari Dahal, Jungmin Kim, Dhiraj Kumar Chaudhary, Thi Tuyet Nhan Le, Dong-Uk Kim, Hyein Jang, Jaisoo Kim
    Antonie van Leeuwenhoek.2022; 115(5): 563.     CrossRef
  • Aestuarium zhoushanense is a later heterotypic synonym of Marivivens donghaensis, and transfer of Paradonghicola geojensis to the genus Marivivens as Marivivens geojensis comb. nov
    Luxuan Qu, Yating Li, Wanpeng Wang, Zongze Shao, Zheng Gao, Qiliang Lai
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Lysobacter chinensis sp. nov., a cellulose-degrading strain isolated from cow dung compost
    Yuyue Liu, Liuyan Zhou, Xinping Yang, Pengbin Li, Jinping Dai, Yuqing Xie, Xiaowu Wang, Zhifang Wang, Zhanqiang Su, Lei Feng
    Antonie van Leeuwenhoek.2022; 115(8): 1031.     CrossRef
  • Quadrisphaera setariae sp. nov., polyphosphate-accumulating bacterium occurring as tetrad or aggregate cocci and isolated from Setaria viridis
    Inhyup Kim, Geeta Chhetri, Jiyoun Kim, Yoonseop So, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Thauera sedimentorum sp. nov., Isolated from Coastal Sediment
    Jihye Baek, Nattira Jaikwang, Jong-Hwa Kim, Jung-Hoon Yoon, Jung-Sook Lee, Ampaitip Sukhoom, Wonyong Kim
    Current Microbiology.2022;[Epub]     CrossRef
  • Description of Deefgea piscis sp. nov., and Deefgea tanakiae sp. nov., isolated from the gut of Korean indigenous fish
    Do-Hun Gim, So-Yeon Lee, Jeong Eun Han, Jae-Yun Lee, Seo Min Kang, Jin-Woo Bae
    Journal of Microbiology.2022; 60(11): 1061.     CrossRef
  • Flavobacterium proteolyticum sp. nov., isolated from aquaculture water
    Juan Du, Yang Liu, Tao Pei, Anzhang Li, Ming-Rong Deng, Honghui Zhu
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Paracoccus everestensis sp. nov., a novel bacterium with great antioxidant capacity isolated from the north slope of Mount Everest
    Xiaowen Cui, Yang Liu, Yajie Xu, Tuo Chen, Songlin Zhang, Jinxiu Wang, Ruiqi Yang, Guangxiu Liu, Wei Zhang, Gaosen Zhang
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • [Retracted] Assembly of 97 Novel Bacterial Genomes in the Microbial Community Affiliated with Polyvinyl Alcohol in Soil of Northern China
    Jiaxing Liu, Xun Gu, Hui Li, Yu-Hang Zhang
    BioMed Research International.2022;[Epub]     CrossRef
  • Comparative Genomics Reveals Genetic Diversity and Metabolic Potentials of the Genus Qipengyuania and Suggests Fifteen Novel Species
    Yang Liu, Tao Pei, Juan Du, Qing Yao, Ming-Rong Deng, Honghui Zhu, Gaurav Sharma, Feng Cai, Xuewei Xu
    Microbiology Spectrum.2022;[Epub]     CrossRef
  • Sagittula salina sp. nov., isolated from marine waste
    Leila Satari, Esther Molina-Menor, Àngela Vidal-Verdú, Javier Pascual, Juli Peretó, Manuel Porcar
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Pseudophaeobacter flagellatus sp. nov., isolated from coastal water
    Yong Guan, Yue Jiang, Young-Min Kim, Seung Yeob Yu, Seung-Hyeon Choi, Hanna Choe, Zhun Li, Mi-Kyung Lee
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Thalassococcus arenae sp. nov. isolated from sea sand
    Veeraya Weerawongwiwat, Jong-Hwa Kim, Jung-Sook Lee, Jung-Hoon Yoon, Ampaitip Sukhoom, Wonyong Kim
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Microaerobic enrichment of benzene-degrading bacteria and description of Ideonella benzenivorans sp. nov., capable of degrading benzene, toluene and ethylbenzene under microaerobic conditions
    Anna Bedics, András Táncsics, Erika Tóth, Sinchan Banerjee, Péter Harkai, Balázs Kovács, Károly Bóka, Balázs Kriszt
    Antonie van Leeuwenhoek.2022; 115(9): 1113.     CrossRef
  • Hymenobacter lucidus sp. nov., and Hymenobacter nitidus sp. nov., isolated from soil
    Hyejin Oh, Hyang Burm Lee, Myung Kyum Kim
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Natronococcus pandeyae sp. nov., a Novel Haloarchaeon from Sambhar Salt Lake
    Swapnil Kajale, Neelima Deshpande, Tushar Lodha, Yogesh Shouche, Avinash Sharma
    Current Microbiology.2022;[Epub]     CrossRef
  • Parachryseolinea silvisoli gen. nov., sp. nov., isolated from forest soil, and reclassification of Chryseolinea flava as Pseudochryseolinea flava gen. nov., comb. nov.
    Chunling Wang, Yingying Lv, Anzhang Li, Qing Yao, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Whole genome sequencing of the halophilic Halomonas qaidamensis XH36, a novel species strain with high ectoine production
    Tiantian Zhang, Tianqi Cui, Yaning Cao, Yongzhen Li, Fenghui Li, Derui Zhu, Jiangwa Xing
    Antonie van Leeuwenhoek.2022; 115(4): 545.     CrossRef
  • Draft Genome Sequence of Labrys okinawensis, Isolated from Acaciella sp. Nodules in Mexico
    Belén Chávez-Ramírez, Violeta Larios-Serrato, Paulina Estrada-de los Santos, Leighton Pritchard
    Microbiology Resource Announcements.2022;[Epub]     CrossRef
  • Sporosarcina jiandibaonis sp. nov., isolated from saline soil
    Delong Kong, Zhanfeng Xia, Yan Gao, Yiqing Zhou, Xu Jiang, Piao Xu, Wei Guo, Zhiyong Ruan
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Niabella agricola sp. nov., isolated from paddy soil
    Shih-Yao Lin, Chia-Fang Tsai, Asif Hameed, Tzung-Han Lee, Chiu-Chung Young
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Description of Corynebacterium poyangense sp. nov., isolated from the feces of the greater white-fronted geese (Anser albifrons)
    Qian Liu, Guoying Fan, Kui Wu, Xiangning Bai, Xi Yang, Wentao Song, Shengen Chen, Yanwen Xiong, Haiying Chen
    Journal of Microbiology.2022; 60(7): 668.     CrossRef
  • Paludisphaera rhizosphaereae sp. nov., a new member of the family Isosphaeraceae, isolated from the rhizosphere soil of Erianthus ravennae
    Khongsai L. Lhingjakim, Nandardhane Smita, Gaurav Kumar, Uppada Jagadeeshwari, Shabbir Ahamad, Chintalapati Sasikala, Chintalapati Venkata Ramana
    Antonie van Leeuwenhoek.2022; 115(8): 1073.     CrossRef
  • Fibrella aquatilis sp. nov., Fibrella rubiginis sp. nov. and Fibrella forsythiae sp. nov., isolated from freshwater, rusty iron and forsythia flower
    Heeyoung Kang, Haneul Kim, Seokhyeon Bae, Kiseong Joh
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Corallococcus silvisoli sp. nov., a novel myxobacterium isolated from subtropical forest soil
    Xian-Jiao Zhang, Guang-Da Feng, Yang Liu, Yang Zhou, Xiaoqin Deng, Qing Yao, Honghui Zhu
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Fundicoccus fermenti sp. nov., an indigo-reducing facultative anaerobic alkaliphile isolated from indigo fermentation liquor used for dyeing
    Zhihao Tu, Helena de Fátima Silva Lopes, Isao Yumoto
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Lignin-Oxidizing Vibrios Involved in the Mineralization of Plant Detritus in the Continental Slope
    Jianyang Li, Chunming Dong, Biswarup Sen, Qiliang Lai, Linfeng Gong, Guangyi Wang, Zongze Shao
    SSRN Electronic Journal .2022;[Epub]     CrossRef
  • Mapping Strengths and Weaknesses of Different Clustering Approaches to Deciphering Bacterial Chimerism
    David J. Burks, Rajeev K. Azad
    OMICS: A Journal of Integrative Biology.2022; 26(8): 422.     CrossRef
  • Unraveling Nitrogen, Sulfur, and Carbon Metabolic Pathways and Microbial Community Transcriptional Responses to Substrate Deprivation and Toxicity Stresses in a Bioreactor Mimicking Anoxic Brackish Coastal Sediment Conditions
    Paula Dalcin Martins, Maider J. Echeveste Medrano, Arslan Arshad, Julia M. Kurth, Heleen T. Ouboter, Huub J. M. Op den Camp, Mike S. M. Jetten, Cornelia U. Welte
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Rhizobium setariae sp. nov., an Indole-3-Acetic Acid-Producing Bacterium Isolated from Green Foxtail, Setaria viridis
    Minchung Kang, Taegun Seo
    Current Microbiology.2022;[Epub]     CrossRef
  • Description of Flavobacterium cyclinae sp. nov. and Flavobacterium channae sp. nov., isolated from the intestines of Cyclina sinensis (Corb shell) and Channa argus (Northern snakehead)
    Seomin Kang, Jae-Yun Lee, Jeong Eun Han, Yun-Seok Jeong, Do-Hun Gim, Jin-Woo Bae
    Journal of Microbiology.2022; 60(9): 890.     CrossRef
  • Paenibacillus arenosi sp. nov., a siderophore-producing bacterium isolated from coastal sediment
    Jihye Baek, Veeraya Weerawongwiwat, Jong-Hwa Kim, Jung-Hoon Yoon, Jung-Sook Lee, Ampaitip Sukhoom, Wonyong Kim
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Vagococcus allomyrinae sp. nov. and Enterococcus larvae sp. nov., isolated from larvae of Allomyrina dichotoma
    Sung-Min Kim, Yeong-Sik Byeon, Hong Lim Yang, In Seop Kim, Soon Dong Lee
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Staphylococcus ratti sp. nov. Isolated from a Lab Rat
    Vojtěch Kovařovic, Ivo Sedláček, Petr Petráš, Stanislava Králová, Ivana Mašlaňová, Pavel Švec, Meina Neumann-Schaal, Tibor Botka, Tereza Gelbíčová, Eva Staňková, Jiří Doškař, Roman Pantůček
    Pathogens.2022; 11(1): 51.     CrossRef
  • Mucilaginibacter rivuli sp. nov., isolated from a water rivulet
    Seokhyeon Bae, Heeyoung Kang, Haneul Kim, Kiseong Joh
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • A Novel Alteromonas Phage Lineage with a Broad Host Range and Small Burst Size
    Yahui Yang, Ruijie Ma, Chen Yu, Junlei Ye, Xiaowei Chen, Long Wang, Nianzhi Jiao, Rui Zhang, Wei-Hua Chen
    Microbiology Spectrum.2022;[Epub]     CrossRef
  • Muricauda aurea sp. nov. and Muricauda profundi sp. nov., two marine bacteria isolated from deep sea sediment of Pacific Ocean
    Sufang Zhao, Renju Liu, Qiliang Lai, Zongze Shao
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Lysobacter ciconiae sp. nov., and Lysobacter avium sp. nov., isolated from the faeces of an Oriental stork
    So-Yeon Lee, Pil Soo Kim, Hojun Sung, Dong-Wook Hyun, Jin-Woo Bae
    Journal of Microbiology.2022; 60(5): 469.     CrossRef
  • Culturomics of Bacteria from Radon-Saturated Water of the World’s Oldest Radium Mine
    Gabriela Kapinusova, Kunal Jani, Tereza Smrhova, Petr Pajer, Irena Jarosova, Jachym Suman, Michal Strejcek, Ondrej Uhlik, Jing Han
    Microbiology Spectrum.2022;[Epub]     CrossRef
  • Pseudomonas germanica sp. nov., isolated from Iris germanica rhizomes
    Kostadin Evgeniev Atanasov, David Miñana-Galbis, Julia Gallego, Annabel Serpico, Montserrat Bosch, Teresa Altabella, Albert Ferrer
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Cohnella herbarum sp. nov., isolated from wild grass fermentation broth
    Miyoung Won, Shin Ae Lee, Seung-Beom Hong, Byeong-Hak Han, Soon-Wo Kwon
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Description of Prasinibacter corallicola gen. nov., sp. nov., a zeaxanthin-producing bacterium isolated from stony coral Porites lutea
    Guanghua Wang, Jianfeng Liu, Yuanjin Li, Jin Li, Jixin Luo, Biao Chen, Zhiheng Liao, Hongfei Su, Jiayuan Liang, Kefu Yu
    Antonie van Leeuwenhoek.2022; 115(7): 933.     CrossRef
  • Phylogenomic analysis of a metagenome-assembled genome indicates a new taxon of an anoxygenic phototroph bacterium in the family Chromatiaceae and the proposal of “Candidatus Thioaporhodococcus” gen. nov
    Bakshi Amulyasai, Rai Anusha, Chintalapati Sasikala, Chintalapati Venkata Ramana
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Mucilaginibacter aurantiaciroseus sp. nov. and Mucilaginibacter flavidus sp. nov., isolated from Renlongba glacier on the Tibetan Plateau
    Lei-Lei Yang, Yu Pang, Hong-Can Liu, Yu-Hua Xin, Qing Liu
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Aeromicrobium stalagmiti sp. nov., isolated from a lava cave
    Yeong-Sik Byeon, Sung-Min Kim, Hong Lim Yang, In Seop Kim, Soon Dong Lee
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Halorubrum salinarum sp. nov., an extremely halophilic archaeon isolated from a saturated brine pond of a saltern
    Ho Le Han, Reneelyn E. Danganan, Zhun Li, Na-Ri Shin, Reuel M. Bennett, Gina R. Dedeles, Song-Gun Kim
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Sulfuriroseicoccus oceanibius gen. nov., sp. nov., a representative of the phylum Verrucomicrobia with a special cytoplasmic membrane
    Xi Feng, Qi-Yun Liang, Qi-Hang Zou, Meng-Qi Ye, Zong-Jun Du
    Antonie van Leeuwenhoek.2022; 115(2): 337.     CrossRef
  • Sediminibacillus dalangtanensis sp. nov., a moderate halophile isolated from hypersaline sediments of the Qaidam Basin in Northwest China
    Ting Huang, Qiliang Lai, Long Xiao, Linfeng Gong, Zongze Shao, Hongmei Wang, Yi Xu, Ricardo Amils, Cristina Escudero, José M. Martinez
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Croceicoccus hydrothermalis sp. nov., isolated from shallow-sea hydrothermal system off Kueishantao Island
    Beihan Chen, Youting Ye, Dan Lin, Mu Zhang, Jia Sun, Kai Tang
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Deciphering Genomes: Genetic Signatures of Plant-Associated Micromonospora
    Raúl Riesco, Maite Ortúzar, José Manuel Fernández-Ábalos, Martha E. Trujillo
    Frontiers in Plant Science.2022;[Epub]     CrossRef
  • Erwinia phyllosphaerae sp. nov., a novel bacterium isolated from phyllosphere of pomelo (Citrus maxima)
    Ming-Kai Pan, Guang-Da Feng, Qing Yao, Jiali Li, Chenjian Liu, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Capillimicrobium parvum gen. nov., sp. nov., a novel representative of Capillimicrobiaceae fam. nov. within the order Solirubrobacterales, isolated from a grassland soil
    Selma Vieira, Katharina J. Huber, Alicia Geppert, Jacqueline Wolf, Meina Neumann-Schaal, Manja Luckner, Gerhard Wanner, Mathias Müsken, Jörg Overmann
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Salegentibacter lacus sp. nov. and Salegentibacter tibetensis sp. nov., isolated from hypersaline lakes on the Tibetan Plateau
    Huibin Lu, Peixin Gao, Dorji Phurbu, Qinglong L. Wu, Peng Xing
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Sphingomonas cannabina sp. nov., isolated from Cannabis sativa L. ‘Cheungsam’
    Doeun Jeon, Lingmin Jiang, Yuxin Peng, Jiyoon Seo, Zhun Li, Seung-Hwan Park, Rae-Dong Jeong, Soon Ju Park, Jae Cheol Jeong, Jiyoung Lee
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Ideonella alba sp. nov. and Ideonella aquatica sp. nov. isolated from an aquaculture farm
    Juan Du, Yang Liu, Tao Pei, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Gottfriedia endophyticus sp. nov., a novel indole-acetic acid producing bacterium isolated from the roots of rice plant
    Geeta Chhetri, Inhyup Kim, Taegun Seo
    Antonie van Leeuwenhoek.2022; 115(7): 943.     CrossRef
  • Gut microbiome of the largest living rodent harbors unprecedented enzymatic systems to degrade plant polysaccharides
    Lucelia Cabral, Gabriela F. Persinoti, Douglas A. A. Paixão, Marcele P. Martins, Mariana A. B. Morais, Mariana Chinaglia, Mariane N. Domingues, Mauricio L. Sforca, Renan A. S. Pirolla, Wesley C. Generoso, Clelton A. Santos, Lucas F. Maciel, Nicolas Terrap
    Nature Communications.2022;[Epub]     CrossRef
  • Aggregatimonas sangjinii gen. nov., sp. nov., a novel silver nanoparticle synthesizing bacterium belonging to the family Flavobacteriaceae
    Dawoon Chung, Jaejoon Jung, Jaoon Young Hwan Kim, Kyung Woo Kim, Yong Min Kwon
    Antonie van Leeuwenhoek.2022; 115(2): 325.     CrossRef
  • Comparative genomic analyses of four novel Ramlibacter species and the cellulose-degrading properties of Ramlibacter cellulosilyticus sp. nov.
    Minchung Kang, Geeta Chhetri, Inhyup Kim, Yoonseop So, Taegun Seo
    Scientific Reports.2022;[Epub]     CrossRef
  • Cellulosimicrobium protaetiae sp. nov., isolated from the gut of the larva of Protaetia brevitarsis seulensis
    Ho Le Han, Tra T. H. Nguyen, Zhun Li, Na-Ri Shin, Song-Gun Kim
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Prokaryotes of renowned Karlovy Vary (Carlsbad) thermal springs: phylogenetic and cultivation analysis
    Tereza Smrhova, Kunal Jani, Petr Pajer, Gabriela Kapinusova, Tomas Vylita, Jachym Suman, Michal Strejcek, Ondrej Uhlik
    Environmental Microbiome.2022;[Epub]     CrossRef
  • Draft Genome Sequences of the Kocuria subflava Type Strain KCTC 39547 and Kocuria sp. Strain JC486, a Newly Isolated Strain from a Wild Ass Sanctuary in Gujarat, India
    Jagadeeshwari Uppada, Sasikala Chintalapati, Karthika K, Venkata Ramana Chintapati, J. Cameron Thrash
    Microbiology Resource Announcements.2022;[Epub]     CrossRef
  • Cellulomonas fulva sp. nov., isolated from oil-contaminated soil
    Ram Hari Dahal, Jungmin Kim, Dong-Uk Kim, Ke Dong, Yongseok Hong, Dhiraj Kumar Chaudhary
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Hymenobacter piscis sp. nov., isolated from a fish pond
    Shih-Yi Sheu, Che-Chia Yang, Soon-Wo Kwon, Wen-Ming Chen
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Corynebacterium uberis sp. nov. frequently isolated from bovine mastitis
    Sonja Kittl, Eveline Studer, Isabelle Brodard, Andreas Thomann, Jörg Jores
    Systematic and Applied Microbiology.2022; 45(4): 126325.     CrossRef
  • Spiractinospora alimapuensis gen. nov., sp. nov., isolated from marine sediment of Valparaíso Bay (Chile) and proposal for reclassification of two species of the genus Nocardiopsis
    Fernanda P. Claverías, Néstor Serna-Cardona, Andrés Cumsille, Leonardo Zamora-Leiva, Raúl Riesco, Eduardo Couve, Martha E. Trujillo, Beatriz Cámara
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Microvirga splendida sp. nov., bacteria isolated from soil
    Yuna Park, Soohyun Maeng, Tuvshinzaya Damdintogtokh, Hyejin Oh, Minji Bang, Jaewoo Bai, Myung Kyum Kim
    Antonie van Leeuwenhoek.2022; 115(6): 741.     CrossRef
  • Genome analysis of Pseudomonas species reveals that Pseudomonas panacis Park et al. 2005 is a later heterotypic synonym of Pseudomonas marginalis (Brown 1918) Stevens 1925 (Approved Lists 1980)
    Ritu Rani Archana Kujur, Sushanta Deb, Subrata K. Das
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Halomonas antri sp. nov., a carotenoid-producing bacterium isolated from surface seawater
    Yoonseop So, Geeta Chhetri, Inhyup Kim, Minchung Kang, Jiyoun Kim, Byungjo Lee, Wonhee Jang, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Parvicella tangerina gen. nov., sp. nov. (Parvicellaceae fam. nov., Flavobacteriales), first cultured representative of the marine clade UBA10066, and Lysobacter luteus sp. nov., from activated sludge of a seawater-processing wastewater treat
    Teresa Lucena, Olga Sánchez, Isabel Sanz-Saez, Silvia G. Acinas, Laura Garrido, Jordi Mas, M. Carmen Macián, María A. Ruvira, David R. Arahal, María J. Pujalte
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Sphingomonas folii sp. nov., Sphingomonas citri sp. nov. and Sphingomonas citricola sp. nov., isolated from citrus phyllosphere
    Guang-Da Feng, Jiali Li, Mingkai Pan, Xiaoqin Deng, Meng Chen, Qing Yao, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Frequent Occurrence and Metabolic Versatility of Marinifilaceae Bacteria as Key Players in Organic Matter Mineralization in Global Deep Seas
    Jianyang Li, Chunming Dong, Qiliang Lai, Guangyi Wang, Zongze Shao, Thomas J. Sharpton
    mSystems.2022;[Epub]     CrossRef
  • Tenebrionicola larvae gen. nov., sp. nov., isolated from larvae of mealworm Tenebrio molitor L., and a proposal to transfer Erwinia teleogrylli Liu et al. 2016 to a new genus Entomohabitans as Entomohabitans teleogrylli comb. nov.
    Soon Dong Lee, Seong-Min Kim, Yeong-Sik Byeon, Hong Lim Yang, Soo Hong Chang, In Seop Kim
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Sessilibacter corallicola gen. nov., sp. nov., a sessile bacterium isolated from coral Porites lutea
    Jianfeng Liu, Jin Li, Jixin Luo, Yuanjin Li, Zian Yang, Chengli Huang, Feilong Sun, Guanghua Wang
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Moraxella tetraodonis sp. nov., isolated from freshwater pufferfish (Tetraodon cutcutia) skin
    Lipika Das, Subrata K. Das
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Sulfurimonas marina sp. nov., an obligately chemolithoautotrophic, sulphur-oxidizing bacterium isolated from a deep-sea sediment sample from the South China Sea
    Zhaodi Wang, Shasha Wang, Qiliang Lai, Shiping Wei, Lijing Jiang, Zongze Shao
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Genome-based reclassification of Azospirillum brasilense Az39 as the type strain of Azospirillum argentinense sp. nov.
    Natália dos Santos Ferreira, Anahí Coniglio, Mariana Puente, Fernando Hayashi Sant’Anna, Guillermo Maroniche, Julia García, Romina Molina, Sofia Nievas, Camila Gazolla Volpiano, Adriana Ambrosini, Luciane M. P. Passaglia, Raul O. Pedraza, Verônica Massena
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Genome-based, phenotypic and chemotaxonomic classification of Faecalibacterium strains: proposal of three novel species Faecalibacterium duncaniae sp. nov., Faecalibacterium hattorii sp. nov. and Faecalibacterium gallinarum sp. nov.
    Mitsuo Sakamoto, Naomi Sakurai, Hiroki Tanno, Takao Iino, Moriya Ohkuma, Akihito Endo
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Bradyrhizobium altum sp. nov., Bradyrhizobium oropedii sp. nov. and Bradyrhizobium acaciae sp. nov. from South Africa show locally restricted and pantropical nodA phylogeographic patterns
    Juanita R. Avontuur, Marike Palmer, Chrizelle W. Beukes, Wai Y. Chan, Taponeswa Tasiya, Elritha van Zyl, Martin P.A. Coetzee, Tomasz Stepkowski, Stephanus N. Venter, Emma T. Steenkamp
    Molecular Phylogenetics and Evolution.2022; 167: 107338.     CrossRef
  • Azospirillum tabaci sp. nov., a bacterium isolated from rhizosphere soil of Nicotiana tabacum L
    Yan-Qing Duan, Xing-Kui Zhou, Neeli Habib, Shi-Qiang Gao, Li-Min Dong, Xiao-Fei Liu, Yang-Mei Shi, Wen-Jun Li, Gang Du
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Cecal Microbial Hydrogen Cycling Potential Is Linked to Feed Efficiency Phenotypes in Chickens
    Gustavo Antonio Ramírez, Jitendra Keshri, Isabella Vahrson, Arkadiy I. Garber, Mark E. Berrang, Nelson A. Cox, Fernando González-Cerón, Samuel E. Aggrey, Brian B. Oakley
    Frontiers in Veterinary Science.2022;[Epub]     CrossRef
  • Enterococcus alishanensis sp. nov., a novel lactic acid bacterium isolated from fresh coffee beans
    Jen-hao Chung, Misa Otoguro, Fujitoshi Yanagida, Hui-chung Wu, Yu-chung Chang, Yun-Shien Lee, Yi-sheng Chen
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Comparative Genomics of the Genus Pseudomonas Reveals Host- and Environment-Specific Evolution
    Zaki Saati-Santamaría, Riccardo Baroncelli, Raúl Rivas, Paula García-Fraile, Olaya Rendueles Garcia
    Microbiology Spectrum.2022;[Epub]     CrossRef
  • Croceicoccus gelatinilyticus sp. nov., isolated from a tidal flat sediment
    Tao Pei, Yang Liu, Juan Du, Kunpeng Huang, Ming-Rong Deng, Honghui Zhu
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Shewanella jiangmenensis sp. nov., isolated from aquaculture water
    Yingli Song, Anzhang Li, Shuaishuai Xu, Mingxia Zhang, Qing Yao, Lian Ma, Honghui Zhu
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Mesonia aestuariivivens sp. nov., isolated from a tidal flat
    Sooyeon Park, Jung-Sook Lee, Wonyong Kim, Jung-Hoon Yoon
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Chryseobacterium tagetis sp. nov., a plant growth promoting bacterium with an antimicrobial activity isolated from the roots of medicinal plant (Tagetes patula)
    Geeta Chhetri, Inhyup Kim, Jiyoun Kim, Yoonseop So, Taegun Seo
    The Journal of Antibiotics.2022; 75(6): 312.     CrossRef
  • Description ofPseudogemmobacter faecipullorumsp. nov., isolated from poultry manure
    Shih-Yao Lin, Asif Hameed, Chia-Fang Tsai, Yu-Shan Tang, Chiu-Chung Young
    FEMS Microbiology Letters.2022;[Epub]     CrossRef
  • Acetylenotrophic and Diazotrophic Bradyrhizobium sp. Strain I71 from TCE-Contaminated Soils
    Denise M. Akob, John M. Sutton, Timothy J. Bushman, Shaun M. Baesman, Edina Klein, Yesha Shrestha, Robert Andrews, Janna L. Fierst, Max Kolton, Sara Gushgari-Doyle, Ronald S. Oremland, John L. Freeman, Jeremy D. Semrau
    Applied and Environmental Microbiology.2022;[Epub]     CrossRef
  • Definition of the Metagenomic Profile of Ocean Water Samples From the Gulf of Mexico Based on Comparison With Reference Samples From Sites Worldwide
    Antonio Loza, Fernando García-Guevara, Lorenzo Segovia, Alejandra Escobar-Zepeda, Maria del Carmen Sanchez-Olmos, Enrique Merino, Alejandro Sanchez-Flores, Liliana Pardo-Lopez, Katy Juarez, Rosa-Maria Gutierrez-Rios
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Marinobacterium arenosum sp. nov., isolated from a coastal sand
    Yunjeong Lee, Veeraya Weerawongwiwat, Jong-Hwa Kim, Jung-Hoon Yoon, Jung-Sook Lee, Ampaitip Sukhoom, Wonyong Kim
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Nocardioides palaemonis sp. nov. and Tessaracoccus palaemonis sp. nov., isolated from the gastrointestinal tract of lake prawn
    Do-Yeon Kim, In-Chul Jeong, So-Yeon Lee, Yun-Seok Jeong, Jeong Eun Han, Euon Jung Tak, June-Young Lee, Pil Soo Kim, Dong-Wook Hyun, Jin-Woo Bae
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Genomic characterization and production of antimicrobial lipopeptides by Bacillus velezensis P45 growing on feather by-products
    Carolini Esmeriz da Rosa, Cristian Mauricio Barreto Pinilla, Paolo Stincone, Jamile Queiroz Pereira, Ana Paula Muterle Varela, Fabiana Quoos Mayer, Adriano Brandelli
    Journal of Applied Microbiology.2022; 132(3): 2067.     CrossRef
  • Subtercola endophyticus sp. nov., a cold-adapted bacterium isolated from Abies koreana
    Lingmin Jiang, Yuxin Peng, Jiyoon Seo, Doeun Jeon, Mi Gyeong Jo, Ju Huck Lee, Jae Cheol Jeong, Cha Young Kim, Hyeong Cheol Park, Jiyoung Lee
    Scientific Reports.2022;[Epub]     CrossRef
  • Type IV pili trigger episymbiotic association of Saccharibacteria with its bacterial host
    Bingliang Xie, Jian Wang, Yong Nie, Jing Tian, Zerui Wang, Dongwei Chen, Beiyu Hu, Xiao-Lei Wu, Wenbin Du
    Proceedings of the National Academy of Sciences.2022;[Epub]     CrossRef
  • Gymnodinialimonas ceratoperidinii gen. nov., sp. nov., isolated from rare marine dinoflagellate Ceratoperidinium margalefii
    Yue Jiang, Yuxin Peng, Hyeon Ho Shin, Hyun Jung Kim, Ki-Hyun Kim, Lingmin Jiang, Jiyoung Lee, Zhun Li
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Pufferfish (Tetraodon cutcutia) Sampled from a Freshwater River Serves as an Intermediate Reservoir of a Sucrose Nonfermenting Variant of Vibrio cholerae PS-4
    Lipika Das, Sushanta Deb, Eiji Arakawa, Shinji Yamasaki, Subrata K. Das, Courtney J. Robinson
    Microbiology Spectrum.2022;[Epub]     CrossRef
  • Deinococcus betulae sp. nov. and Deinococcus arboris sp. nov., novel bacteria isolated from bark of birch tree (Betula platyphylla)
    Seokhyeon Bae, Heeyoung Kang, Haneul Kim, Kiseong Joh
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Hi-C deconvolution of a textile dye–related microbiome reveals novel taxonomic landscapes and links phenotypic potential to individual genomes
    Ayixon Sánchez-Reyes, Luz Bretón-Deval, Hayley Mangelson, Ilse Salinas-Peralta, Alejandro Sanchez-Flores
    International Microbiology.2022; 25(1): 99.     CrossRef
  • Thermal Endurance by a Hot-Spring-Dwelling Phylogenetic Relative of the Mesophilic Paracoccus
    Nibendu Mondal, Chayan Roy, Sumit Chatterjee, Jagannath Sarkar, Subhajit Dutta, Sabyasachi Bhattacharya, Ranadhir Chakraborty, Wriddhiman Ghosh, Jeffrey A. Gralnick
    Microbiology Spectrum.2022;[Epub]     CrossRef
  • Microbiota of the Pregnant Mouse: Characterization of the Bacterial Communities in the Oral Cavity, Lung, Intestine, and Vagina through Culture and DNA Sequencing
    Jonathan M. Greenberg, Roberto Romero, Andrew D. Winters, Jose Galaz, Valeria Garcia-Flores, Marcia Arenas-Hernandez, Jonathan Panzer, Zachary Shaffer, David J. Kracht, Nardhy Gomez-Lopez, Kevin R. Theis, Jennifer M. Auchtung
    Microbiology Spectrum.2022;[Epub]     CrossRef
  • Sphingomonas radiodurans sp. nov., a novel radiation-resistant bacterium isolated from the north slope of Mount Everest
    Yang Liu, Tuo Chen, Xiaowen Cui, Yeteng Xu, Shixin Hu, Yidan Zhao, Wei Zhang, Guangxiu Liu, Gaosen Zhang
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Enterovibrio paralichthyis sp. nov., isolated from the gut of an olive flounder Paralichthys olivaceus
    Young-Ok Kim, In-Suk Park, Dong-Gyun Kim, Sooyeon Park, Sung Hoon Han, Jung-Hoon Yoon
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Deep Learning Encoding for Rapid Sequence Identification on Microbiome Data
    Jacob Borgman, Karen Stark, Jeremy Carson, Loren Hauser
    Frontiers in Bioinformatics.2022;[Epub]     CrossRef
  • Arthrobacter wenxiniae sp. nov., a novel plant growth-promoting rhizobacteria species harbouring a carotenoids biosynthetic gene cluster
    Yu-chen Sun, Pengbo Sun, Jing Xue, Yunpeng Du, Hui Yan, Li-wei Wang, Xin-xin Yi, Jian-guang Sun, Xiuhai Zhang, Jun-lian Gao
    Antonie van Leeuwenhoek.2022; 115(3): 353.     CrossRef
  • Microvirga terricola sp. nov. and Microvirga solisilvae sp. nov, isolated from forest soil
    Xianjiao Zhang, Guang-Da Feng, Xiangling Zhen, Yulian Zhang, Xiaoqin Deng, Honghui Zhu, Qing Yao
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Pararoseburia lenta gen. nov., sp. nov. isolated from human faeces
    Rashidin Abdugheni, Yu-Jing Wang, Dan-Hua Li, Meng-Xuan Du, Chang Liu, Nan Zhou, Shuang-Jiang Liu
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Six novel Micromonospora species associated with the phyllosphere and roots of leguminous plants: Micromonospora alfalfae sp. nov., Micromonospora cabrerizensis sp. nov., Micromonospora foliorum sp. nov., Micromonospora hortensis sp. nov., Micromonospora
    Raúl Riesco, Maite Ortúzar, Brenda Román-Ponce, Fernando Sánchez-Juanes, José Mariano Igual, Martha E. Trujillo
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Rothia santali sp. nov., endophytic bacteria isolated from sandalwood (Santalum album L.) seedling
    Ngangyola Tuikhar, Kiran Kirdat, Gayatri Nair, S. Padma, Vipool Thorat, P. Swetha, Shivaji Sathe, R. Sundararaj, Amit Yadav
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Rhodococcus spelaei sp. nov., isolated from a cave, and proposals that Rhodococcus biphenylivorans is a later synonym of Rhodococcus pyridinivorans, Rhodococcus qingshengii and Rhodococcus baikonurensis are later synonyms of Rhodococcus eryth
    Soon Dong Lee, In Seop Kim
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Sweet spheres: succession and CAZyme expression of marine bacterial communities colonizing a mix of alginate and pectin particles
    Carina Bunse, Hanna Koch, Sven Breider, Meinhard Simon, Matthias Wietz
    Environmental Microbiology.2021; 23(6): 3130.     CrossRef
  • Pareuzebyella sediminis gen. nov., sp. nov., a novel marine bacterium in the family Flavobacteriaceae, isolated from a tidal flat sediment
    Zhaobin Huang, Xiaomei Wei, Qiliang Lai, Shiyong Chen, Jianjun Yuan
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Description of Devosia faecipullorum sp. nov., harboring antibiotic- and toxic compound-resistant genes, isolated from poultry manure
    Shih-Yao Lin, Chia-Fang Tsai, Asif Hameed, Yu-Shan Tang, Chiu-Chung Young
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Description of Nocardioides piscis sp. nov., Sphingomonas piscis sp. nov. and Sphingomonas sinipercae sp. nov., isolated from the intestine of fish species Odontobutis interrupta (Korean spotted sleeper) and Siniperca scherzeri (leopard mandarin fish)
    Dong-Wook Hyun, Yun-Seok Jeong, Jae-Yun Lee, Hojun Sung, So-Yeon Lee, Jee-Won Choi, Hyun Sik Kim, Pil Soo Kim, Jin-Woo Bae
    Journal of Microbiology.2021; 59(6): 552.     CrossRef
  • Pseudomonas schmalbachii sp. nov., isolated from the gut of a millipede (Trigoniulus corallinus) from a coconut tree
    Matan Shelomi, Wen-Ming Chen, Hsin-Kuang Chen, Hsin-Ying Lee, Chiu-Chung Young, Shih-Yao Lin, Shwu-Jen Liaw
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Fuscibacter oryzae gen. nov., sp. nov., a phosphate-solubilizing bacterium isolated from the rhizosphere of rice plant
    Geeta Chhetri, Minchung Kang, Jiyoun Kim, Inhyup Kim, Yoonseop So, Taegun Seo
    Antonie van Leeuwenhoek.2021; 114(9): 1453.     CrossRef
  • Genome insight and description of antibiotic producing Massilia antibiotica sp. nov., isolated from oil-contaminated soil
    Ram Hari Dahal, Dhiraj Kumar Chaudhary, Jaisoo Kim
    Scientific Reports.2021;[Epub]     CrossRef
  • Maritimibacter harenae sp. nov. and Sneathiella litorea sp. nov.: members of Alphaproteobacteria isolated from sea sand
    Shehzad Abid Khan, Hye Su Jung, Hye Yoon Park, Che Ok Jeon
    Antonie van Leeuwenhoek.2021; 114(6): 799.     CrossRef
  • Palleronia sediminis sp. nov. and Flavivirga algicola sp. nov., two marine bacteria isolated from offshore areas near Weihai
    Xun-Ke Sun, Ya-Ning Zhang, Yu-Yao Jia, Yan-Lin Zhong, Guan-Jun Chen, Zong-Jun Du
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Paenarthrobacter sp. GOM3 Is a Novel Marine Species With Monoaromatic Degradation Relevance
    Jaime Rosas-Díaz, Alejandra Escobar-Zepeda, Libertad Adaya, Jorge Rojas-Vargas, Diego Humberto Cuervo-Amaya, Ayixon Sánchez-Reyes, Liliana Pardo-López
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Pseudidiomarina piscicola sp. nov., isolated from cultured European seabass, Dicenthrarchus labrax
    M. Carmen Macián, Teresa Lucena, David R. Arahal, María A. Ruvira, Rosa Aznar, María J. Pujalte
    Archives of Microbiology.2021; 203(4): 1293.     CrossRef
  • Pseudoprevotella muciniphila gen. nov., sp. nov., a mucin-degrading bacterium attached to the bovine rumen epithelium
    Sang Weon Na, Byung Hee Chun, Seok-Hyeon Beak, Shehzad Abid Khan, Md. Najmul Haque, Jae Sung Lee, Che Ok Jeon, Sang-Suk Lee, Myunggi Baik, Pankaj Kumar Arora
    PLOS ONE.2021; 16(5): e0251791.     CrossRef
  • Nocardioides baculatus sp. nov., a novel actinomycete isolated from the rhizosphere of Tagetes patula
    Geeta Chhetri, Inhyup Kim, Minchung Kang, Jiyoun Kim, Yoonseop So, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Phylogenomic Analyses of a Clade Within the Family Flavobacteriaceae Suggest Taxonomic Reassignments of Species of the Genera Algibacter, Hyunsoonleella, Jejuia, and Flavivirga, and the Proposal of Pseudalgibacter gen. nov. and Pseudalgibacter alginicilyt
    Miao Li, Ling-Zhi Hou, Xing-Hao Xu, Xiao-Xiao Wang, Ming-Can Zheng, Yan-Jiao Zhang, Ang Liu
    Current Microbiology.2021; 78(8): 3277.     CrossRef
  • Description of antibiotic-producing novel bacteria Paraburkholderia antibiotica sp. nov. and Paraburkholderia polaris sp. nov.
    Ram Hari Dahal, Jungmin Kim, Dhiraj Kumar Chaudhary, Dong-Uk Kim, Jaisoo Kim
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Thiomicrorhabdus sediminis sp. nov. and Thiomicrorhabdus xiamenensis sp. nov., novel sulfur-oxidizing bacteria isolated from coastal sediments and an emended description of the genus Thiomicrorhabdus
    Xuewen Liu, Baoping Chen, Qiliang Lai, Zongze Shao, Lijing Jiang
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Sanguibacter suaedae sp. nov., isolated from the root of Suaeda aralocaspica in north-west PR China
    Qin Ma, Rui-Feng Lei, Yu-Qian Li, Dilireba Abudourousuli, Zulihumaer Rouzi, Muyesaier Aosiman, Fang Liu, Yang-Yang Liu, Deng-Di An, Wen-Jun Li
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Algibacillus agarilyticus gen. nov., sp. nov., isolated from the surface of the red algae Gelidium amansii
    Xue Meng, Ya-Qi Chang, Huan Wang, Zong-Jun Du
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • 'Candidatus Phytoplasma sacchari’, a novel taxon - associated with Sugarcane Grassy Shoot (SCGS) disease
    Kiran Kirdat, Bhavesh Tiwarekar, Vipool Thorat, Shivaji Sathe, Yogesh Shouche, Amit Yadav
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Bruguierivorax albus gen. nov. sp. nov. Isolated from Mangrove Sediment and Proposal of Bruguierivoracaceae fam. nov
    Mi Li, Kai Liu, Yonghong Liu, Chenghai Gao, Xiangxi Yi
    Current Microbiology.2021; 78(2): 856.     CrossRef
  • Uliginosibacterium aquaticum sp. nov., Isolated from a Freshwater Lake
    Jaeho Song, Mirae Kim, Miri S. Park, Yochan Joung, Ilnam Kang, Jang-Cheon Cho
    Current Microbiology.2021; 78(9): 3381.     CrossRef
  • Nonlabens ponticola sp. nov., isolated from seawater and reclassification of Nonlabens sediminis as a later heterotypic synonym of Nonlabens tegetincola
    Ye Lin Seo, Jaejoon Jung, Chi-une Song, Yong Min Kwon, Hye Su Jung, Seong-il Eyun, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Thermosipho ferrireducens sp.nov., an anaerobic thermophilic iron(III)-reducing bacterium isolated from a deep-sea hydrothermal sulfide deposits
    Yao Chen, Yang He, Zongze Shao, Xiqiu Han, Danling Chen, Jian Yang, Xiang Zeng
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Peteryoungia gen. nov. with four new species combinations and description of Peteryoungia desertarenae sp. nov., and taxonomic revision of the genus Ciceribacter based on phylogenomics of Rhizobiaceae
    Praveen Rahi, Mitesh Khairnar, Ashwini Hagir, Avinash Narayan, Kunal R. Jain, Datta Madamwar, Aabeejjeet Pansare, Yogesh Shouche
    Archives of Microbiology.2021; 203(6): 3591.     CrossRef
  • Brevilactibacter coleopterorum sp. nov., isolated from the intestine of the dark diving beetle Hydrophilus acuminatus, and Weissella coleopterorum sp. nov., isolated from the intestine of the diving beetle Cybister lewisianus
    Dong-Wook Hyun, June-Young Lee, Hojun Sung, Pil Soo Kim, Yun-Seok Jeong, Jae-Yun Lee, Ji-Hyun Yun, Jee-Won Choi, Jeong Eun Han, So-Yeon Lee, Euon Jung Tak, Hyun Sik Kim, Jin-Woo Bae
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Crassaminicella thermophila sp. nov., a moderately thermophilic bacterium isolated from a deep-sea hydrothermal vent chimney and emended description of the genus Crassaminicella
    Xue-Gong Li, Jin Lin, Shi-Jie Bai, Jie Dai, Ze-Xi Jiao, Hong-Zhi Tang, Xiao-Qing Qi, Wei-Jia Zhang, Min Liu, Jian-Sheng Xu, Long-Fei Wu
    International Journal of Systematic and Evolutionary Microbiology.2021;[Epub]     CrossRef
  • Isoptericola sediminis sp. nov., Isolated from Chilika Lagoon
    Dhanesh Kumar, Jagadeeshwari U., Krishnaiah A., Suresh G., Ch. Sasikala, Ch. Venkata Ramana
    Current Microbiology.2021; 78(2): 848.     CrossRef
  • “Candidatus Laterigemmans baculatus” gen. nov. sp. nov., the first representative of rod shaped planctomycetes with lateral budding in the family Pirellulaceae
    Dhanesh Kumar, Gaurav Kumar, Uppada Jagadeeshwari, Chintalapati Sasikala, Chintalapati Venkata Ramana
    Systematic and Applied Microbiology.2021; 44(2): 126188.     CrossRef
  • Rahnella laticis sp. nov. and Rahnella contaminans sp. nov., and emended description of the genus Rahnella
    Dabin Jeon, In Seop Kim, Soon Dong Lee
    International Journal of Systematic and Evolutionary Microbiology.2021;[Epub]     CrossRef
  • Proposal of Thermoactinomyces mirandus sp. nov., a filamentous, anaerobic bacterium isolated from a biogas plant
    Mira Mutschlechner, Nina Lackner, Rudolf Markt, Willi Salvenmoser, Christopher A. Dunlap, Andreas O. Wagner
    Antonie van Leeuwenhoek.2021; 114(1): 45.     CrossRef
  • Enrichment and physiological characterization of a novel comammox Nitrospira indicates ammonium inhibition of complete nitrification
    Dimitra Sakoula, Hanna Koch, Jeroen Frank, Mike S M Jetten, Maartje A H J van Kessel, Sebastian Lücker
    The ISME Journal.2021; 15(4): 1010.     CrossRef
  • Pontixanthobacter rizhaonensis sp. nov., a marine bacterium isolated from surface seawater of the Yellow Sea, and proposal of Pseudopontixanthobacter gen. nov., Pseudopontixanthobacter confluentis comb. nov. and Pseudopontixanthobacter sedimi
    Ang Liu, Qing-Jie Xue, Shi-Gen Li, Yan-Jiao Zhang
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Burkholderia species in human infections in Mexico: Identification of B. cepacia, B. contaminans, B. multivorans, B. vietnamiensis,B. pseudomallei and a new Burkholderia species
    Georgina Meza-Radilla, Violeta Larios-Serrato, Rigoberto Hernández-Castro, J. Antonio Ibarra, Paulina Estrada-de los Santos, Yunn-Hwen Gan
    PLOS Neglected Tropical Diseases.2021; 15(6): e0009541.     CrossRef
  • Chryseobacterium caseinilyticum sp. nov., a casein hydrolyzing bacterium isolated from rice plant and emended description of Chryseobacterium piscicola
    Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Minchung Kang, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Genome-Based Taxonomic Rearrangement of the Order Geobacterales Including the Description of Geomonas azotofigens sp. nov. and Geomonas diazotrophica sp. nov.
    Zhenxing Xu, Yoko Masuda, Xueding Wang, Natsumi Ushijima, Yutaka Shiratori, Keishi Senoo, Hideomi Itoh
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Description of Ornithinimicrobium ciconiae sp. nov., and Ornithinimicrobium avium sp. nov., isolated from the faeces of the endangered and near-threatened birds
    So-Yeon Lee, Hojun Sung, Pil Soo Kim, Hyun Sik Kim, Jae-Yun Lee, June-Young Lee, Yun-Seok Jeong, Euon Jung Tak, Jeong Eun Han, Dong-Wook Hyun, Jin-Woo Bae
    Journal of Microbiology.2021; 59(11): 978.     CrossRef
  • CAZymes in Maribacter dokdonensis 62–1 From the Patagonian Shelf: Genomics and Physiology Compared to Related Flavobacteria and a Co-occurring Alteromonas Strain
    Laura A. Wolter, Maximilian Mitulla, Jovan Kalem, Rolf Daniel, Meinhard Simon, Matthias Wietz
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Gephyromycinifex aptenodytis gen. nov., sp. nov., isolated from gut of Antarctic emperor penguin Aptenodytes forsteri
    Wen-Zhuo Zhu, Ya-Ming Ge, Hui-Min Gao, Jun Dai, Xiao-Ling Zhang, Qiao Yang
    Antonie van Leeuwenhoek.2021; 114(12): 2003.     CrossRef
  • Roseibium litorale sp. nov., isolated from a tidal flat sediment and proposal for the reclassification of Labrenzia polysiphoniae as Roseibium polysiphoniae comb. nov.
    Yang Liu, Tao Pei, Juan Du, Meijie Chao, Ming-Rong Deng, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Enrichment of novel Verrucomicrobia, Bacteroidetes, and Krumholzibacteria in an oxygen‐limited methane‐ and iron‐fed bioreactor inoculated with Bothnian Sea sediments
    Paula Dalcin Martins, Anniek de Jong, Wytze K. Lenstra, Niels A. G. M. van Helmond, Caroline P. Slomp, Mike S. M. Jetten, Cornelia U. Welte, Olivia Rasigraf
    MicrobiologyOpen.2021;[Epub]     CrossRef
  • Description of Acinetobacter kanungonis sp. nov., based on phylogenomic analysis
    Lipika Das, Sushanta Deb, Subrata K. Das
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Inhella proteolytica sp. nov. and Inhella gelatinilytica sp. nov., two novel species of the genus Inhella isolated from aquaculture water
    Yang Liu, Tao Pei, Juan Du, Ming-Rong Deng, Honghui Zhu
    Archives of Microbiology.2021; 203(6): 3191.     CrossRef
  • Variimorphobacter saccharofermentans gen. nov., sp. nov., a new member of the family Lachnospiraceae, isolated from a maize-fed biogas fermenter
    Regina Rettenmaier, Nils Thieme, Johanna Streubel, Luca Di Bello, Marie-Louise Kowollik, Liren Huang, Irena Maus, Andreas Klingl, Wolfgang Liebl, Vladimir V. Zverlov
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Crateriforma spongiae sp. nov., isolated from a marine sponge and emended description of the genus “Crateriforma”
    Gaurav Kumar, Dhanesh Kumar, U. Jagadeeshwari, P. K. Sreya, A. Shabbir, Ch. Sasikala, Ch. V. Ramana
    Antonie van Leeuwenhoek.2021; 114(4): 341.     CrossRef
  • Characterization of Sulfurimonas hydrogeniphila sp. nov., a Novel Bacterium Predominant in Deep-Sea Hydrothermal Vents and Comparative Genomic Analyses of the Genus Sulfurimonas
    Shasha Wang, Lijing Jiang, Qitao Hu, Liang Cui, Bitong Zhu, Xiaoteng Fu, Qiliang Lai, Zongze Shao, Suping Yang
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Elizabethkingia argenteiflava sp. nov., isolated from the pod of soybean, Glycine max
    Jun-Hee Hwang, Jihyeon Kim, Jae-heon Kim, SangJoon Mo
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Clostridium fessum sp. nov., isolated from human faeces
    Boram Seo, Kyungchan Jeon, Inwoo Baek, Yung Mi Lee, Kiwoon Baek, GwangPyo Ko
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • A sulfate-reducing bacterial genus, Desulfosediminicola gen. nov., comprising two novel species cultivated from tidal-flat sediments
    Jaeho Song, Juchan Hwang, Ilnam Kang, Jang-Cheon Cho
    Scientific Reports.2021;[Epub]     CrossRef
  • Hyphomicrobium album sp. nov., isolated from mountain soil and emended description of genus Hyphomicrobium
    Qing Xu, Yuxiao Zhang, Xing Wang, Gejiao Wang
    Archives of Microbiology.2021; 203(10): 5931.     CrossRef
  • Bowmanella yangjiangensis sp. nov. and Amphritea pacifica sp. nov., isolated from mariculture fishponds in China
    Zhipeng Cai, Huibin Lu, Youfeng Qian, Letian Chen, Meiying Xu
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Dyella telluris sp. nov. and Dyella acidiphila sp. nov., isolated from forest soil of Dinghushan Biosphere Reserve, China
    Tao Huang, Jia-cheng Fu, Shuo-han Dong, Qiu-mei Zhang, Ting-ting Wu, Li-hong Qiu
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Noviherbaspirillum pedocola sp. nov., isolated from oil-contaminated experimental soil
    Dhiraj Kumar Chaudhary, Ram Hari Dahal, Yongseok Hong
    Archives of Microbiology.2021; 203(6): 3071.     CrossRef
  • Reclassification of Facklamia ignava, Facklamia sourekii and Facklamia tabacinasalis as Falseniella ignava gen. nov., comb. nov., Hutsoniella sourekii gen. nov., comb. nov., and Ruoffia tabacinasalis gen. nov., comb. nov., and description of Ruoffia halot
    Rashmi Fotedar, Krithivasan Sankaranarayanan, Matthew E. Caldwell, Aisha Zeyara, Amina Al Malki, Ridhima Kaul, Hamad Al Shamari, Mohammad Ali, Masoud Al Marri, Paul A. Lawson
    Antonie van Leeuwenhoek.2021; 114(8): 1181.     CrossRef
  • Reconstructing Draft Genomes Using Genome Resolved Metagenomics Reveal Arsenic Metabolizing Genes and Secondary Metabolites in Fresh Water Lake in Eastern India
    Samrat Ghosh, Aditya Narayan Sarangi, Mayuri Mukherjee, Deeksha Singh, Madduluri Madhavi, Sucheta Tripathy
    Bioinformatics and Biology Insights.2021;[Epub]     CrossRef
  • Xyloglucan processing machinery in Xanthomonas pathogens and its role in the transcriptional activation of virulence factors
    Plinio S. Vieira, Isabela M. Bonfim, Evandro A. Araujo, Ricardo R. Melo, Augusto R. Lima, Melissa R. Fessel, Douglas A. A. Paixão, Gabriela F. Persinoti, Silvana A. Rocco, Tatiani B. Lima, Renan A. S. Pirolla, Mariana A. B. Morais, Jessica B. L. Correa, L
    Nature Communications.2021;[Epub]     CrossRef
  • Mesobacillus aurantius sp. nov., isolated from an orange-colored pond near a solar saltern
    Anusha Rai, N. Smita, A. Shabbir, U. Jagadeeshwari, T. Keertana, Ch. Sasikala, Ch. V. Ramana
    Archives of Microbiology.2021; 203(4): 1499.     CrossRef
  • Paenibacillus foliorum sp. nov., Paenibacillus phytohabitans sp. nov., Paenibacillus plantarum sp. nov., Paenibacillus planticolens sp. nov., Paenibacillus phytorum sp. nov. and Paenibacillus germinis sp. nov., isolated from the Arabidopsis t
    Shan Shan Qi, Margo Cnockaert, Aurélien Carlier, Peter A. Vandamme
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Marinobacter orientalis sp. nov., a thiosulfate-oxidizing bacterium isolated from a marine solar saltern
    Feng-Bai Lian, Xu-Yang Chen, Shan Jiang, Guang-Yu Li, Zong-Jun Du
    Antonie van Leeuwenhoek.2021; 114(6): 765.     CrossRef
  • Cold-Active Shewanella glacialimarina TZS-4T nov. Features a Temperature-Dependent Fatty Acid Profile and Putative Sialic Acid Metabolism
    Muhammad Suleman Qasim, Mirka Lampi, Minna-Maria K. Heinonen, Berta Garrido-Zabala, Dennis H. Bamford, Reijo Käkelä, Elina Roine, Leif Peter Sarin
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Descriptions of Roseiconus nitratireducens gen. nov. sp. nov. and Roseiconus lacunae sp. nov.
    Dhanesh Kumar, Gaurav Kumar, Jagadeeshwari Uppada, Shabbir Ahmed, Chintalapati Sasikala, Chintalapati Venkata Ramana
    Archives of Microbiology.2021; 203(2): 741.     CrossRef
  • Comparative Genome Analysis of Bacillus amyloliquefaciens Focusing on Phylogenomics, Functional Traits, and Prevalence of Antimicrobial and Virulence Genes
    Hualin Liu, Vimalkumar Prajapati, Shobha Prajapati, Harsh Bais, Jianguo Lu
    Frontiers in Genetics.2021;[Epub]     CrossRef
  • Taibaiella lutea sp. nov., Isolated from Ubiquitous Weedy Grass
    Geeta Chhetri, Inhyup Kim, Jiyoun Kim, Minchung Kang, Taegun Seo
    Current Microbiology.2021; 78(7): 2799.     CrossRef
  • Marinobacter shengliensis subsp. alexandrii Subsp. Nov., Isolated from Cultivable Phycosphere Microbiota of Highly Toxic Dinoflagellate Alexandrium catenella LZT09 and Description of Marinobacter shengliensis Subsp. shengliensis Subsp. Nov
    Xi Yang, Rong Xiang, Nurhezreen Md Iqbal, Yu-Han Duan, Xiao-Ai Zhang, Lei Wang, Lin-Zeng Yu, Jia-Zhou Li, Ming-Fei Sun, Qiao Yang, Chun-Tian Zheng, Shen-Quan Liao
    Current Microbiology.2021; 78(4): 1648.     CrossRef
  • Assessment of Erythrobacter Species Diversity through Pan-Genome Analysis with Newly Isolated Erythrobacter sp. 3-20A1M
    Sang-Hyeok Cho, Yujin Jeong, Eunju Lee, So-Ra Ko, Chi-Yong Ahn, Hee-Mock Oh, Byung-Kwan Cho, Suhyung Cho
    Journal of Microbiology and Biotechnology.2021; 31(4): 601.     CrossRef
  • Phylotaxogenomics for the Reappraisal of the Genus Roseomonas With the Creation of Six New Genera
    Anusha Rai, Uppada Jagadeeshwari, Gupta Deepshikha, Nandardhane Smita, Chintalapati Sasikala, Chintalapati Venkata Ramana
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Zafaria cholistanensis gen. nov. sp. nov., a moderately thermotolerant and halotolerant actinobacterium isolated from Cholistan desert soil of Pakistan
    Arshia Amin, Iftikhar Ahmed, Nauman Khalid, Peter Schumann, Hans-Jürgen Busse, Inam Ullah Khan, Ahmad Ali, Shuai Li, Wen-Jun Li
    Archives of Microbiology.2021; 203(4): 1717.     CrossRef
  • Sphingomonas sabuli sp. nov., a carotenoid-producing bacterium isolated from beach sand
    Minchung Kang, Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Gut microbiome drives individual memory variation in bumblebees
    Li Li, Cwyn Solvi, Feng Zhang, Zhaoyang Qi, Lars Chittka, Wei Zhao
    Nature Communications.2021;[Epub]     CrossRef
  • Qipengyuania soli sp. nov., Isolated from Mangrove Soil
    Yang Liu, Tao Pei, Ming-Rong Deng, Honghui Zhu
    Current Microbiology.2021; 78(7): 2806.     CrossRef
  • Description of Microbacterium luteum sp. nov., Microbacterium cremeum sp. nov., and Microbacterium atlanticum sp. nov., three novel C50 carotenoid producing bacteria
    Fuquan Xie, Siwen Niu, Xihuang Lin, Shengxiang Pei, Li Jiang, Yun Tian, Gaiyun Zhang
    Journal of Microbiology.2021; 59(10): 886.     CrossRef
  • Arthrobacter cheniae and Arthrobacter frigidicola sp. nov., isolated from a glacier
    Lei-Lei Yang, Hong-Can Liu, Qing Liu, Yu-Hua Xin
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Stappia albiluteola sp. nov., isolated from marine sediment
    Shan Jiang, You-Yang Sun, Feng-Bai Lian, Xiao-Kui Zhang, Zong-Jun Du
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Flagellatimonas centrodinii gen. nov., sp. nov., a novel member of the family Nevskiaceae isolated from toxin-producing dinoflagellate Centrodinium punctatum
    Yue Jiang, Lingmin Jiang, Yuxin Peng, Ki-Hyun Kim, Hyeon Ho Shin, Young-Min Kim, Jiyoung Lee, Zhun Li
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Adlercreutzia hattorii sp. nov., an equol non-producing bacterium isolated from human faeces
    Mitsuo Sakamoto, Nao Ikeyama, Masahiro Yuki, Takumi Murakami, Hiroshi Mori, Takao Iino, Moriya Ohkuma
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Anaerosporobacter faecicola sp. nov. isolated from faeces of Korean cow
    Seung-Hyeon Choi, Jam-Eon Park, Ji Young Choi, Ji-Sun Kim, Se Won Kang, Jiyoung Lee, Mi-Kyung Lee, Jung-Sook Lee, Ju Huck Lee, Hyunjung Jung, Tai-Young Hur, Hyeun Bum Kim, Ju-Hoon Lee, Jae-Kyung Kim, Seung-Hwan Park
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Marixanthomonas spongiae sp. nov., isolated from marine sponge
    Lingping Zhuang, Haiyue Pang, Li Xu, Dan Chen
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Alkalihalobacterium elongatum gen. nov. sp. nov.: An Antibiotic-Producing Bacterium Isolated From Lonar Lake and Reclassification of the Genus Alkalihalobacillus Into Seven Novel Genera
    Amaraja Joshi, Sonia Thite, Prachi Karodi, Neetha Joseph, Tushar Lodha
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Aliidiomarina indica sp. nov., isolated from deep seawater
    Lei Song, Hongcan Liu, Ying Huang, Xin Dai, Yuguang Zhou
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • First description outside Europe of the emergent pathogen Vibrio europaeus in shellfish aquaculture
    Rodrigo Rojas, Andrés Blanco-Hortas, Hannah Kehlet-Delgado, Alberto Lema, Claudio D. Miranda, Jaime Romero, Paulino Martínez, Juan L. Barja, Javier Dubert
    Journal of Invertebrate Pathology.2021; 180: 107542.     CrossRef
  • Chryseoglobus indicus sp. nov., isolated from deep sea water
    Shengxiang Pei, Fuquan Xie, Wenjing Wang, Shuang Zhang, Gaiyun Zhang
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Sphingosinicella flava sp. nov., indole acetic acid producing bacteria isolated from maize field soil
    Geeta Chhetri, Minchung Kang, Jiyoun Kim, Inhyup Kim, Yoonseop So, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Duganella aceris sp. nov., isolated from tree sap and proposal to transfer of Rugamonas aquatica and Rugamonas rivuli to the genus Duganella as Duganella aquatica comb. nov., with the emended description of the genus Rugamonas
    Dabin Jeon, In Seop Kim, Hanna Choe, Ji-Sun Kim, Soon Dong Lee
    Archives of Microbiology.2021; 203(6): 2843.     CrossRef
  • Hymenobacter puniceus sp. nov., radiation resistant bacteria isolated from soil in South Korea
    Yuna Park, Soohyun Maeng, Tuvshinzaya Damdintogtokh, Minji Bang, Hyejin Oh, Sathiyaraj Srinivasan, Myung Kyum Kim
    Antonie van Leeuwenhoek.2021; 114(10): 1647.     CrossRef
  • Tessaracoccus coleopterorum sp. nov., isolated from the intestine of the dark diving beetle, Hydrophilus acuminatus
    Dong-Wook Hyun, Hojun Sung, Pil Soo Kim, Jae-Yun Lee, Yun-Seok Jeong, Ji-Hyun Yun, Jee-Won Choi, Jeong Eun Han, So-Yeon Lee, Euon Jung Tak, June-Young Lee, Hyun Sik Kim, Jin-Woo Bae
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Limnohabitans radicicola sp. nov., a slow-growing bacterium isolated from rhizosphere of rice plant and emended description of the genus Limnohabitans
    Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Minchung Kang, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Distribution and Diversity of Nisin Producing LAB in Fermented Food
    Basista Rabina Sharma, Dharana Jayant, Kumari Rajshee, Yashika Singh, Prakash M. Halami
    Current Microbiology.2021; 78(9): 3430.     CrossRef
  • Chryseobacterium cheonjiense sp. nov., isolated from forest soil
    Dhiraj Kumar Chaudhary, Ram Hari Dahal, Dong-Uk Kim, Jaisoo Kim
    Archives of Microbiology.2021; 203(2): 725.     CrossRef
  • Undibacterium baiyunense sp. nov., Undibacterium curvum sp. nov., Undibacterium fentianense sp. nov., Undibacterium flavidum sp. nov., Undibacterium griseum sp. nov., Undibacterium hunanense sp. nov., Undibacterium luofuense sp. nov., Undibac
    Huibin Lu, Fei Liu, Tongchu Deng, Meiying Xu
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Flavobacterium franklandianum sp. nov. and Flavobacterium gawalongense sp. nov., isolated from glaciers on the Tibetan Plateau
    Qing Liu, Hong-Can Liu, Lei-Lei Yang, Yu-Hua Xin
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Sediminihaliea albiluteola gen. nov., sp. nov., a new member of the family Halieaceae, isolated from marine sediment
    Shan Jiang, Feng-Bai Lian, You-Yang Sun, Xiao-Kui Zhang, Zong-Jun Du
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Fusibacter ferrireducens sp. nov., an anaerobic, Fe(Ⅲ)- and sulphur-reducing bacterium isolated from mangrove sediment
    Donghua Qiu, Xiang Zeng, Lingyu Zeng, Guangyu Li, Zongze Shao
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Geothermobacter hydrogeniphilus sp. nov., a mesophilic, iron(III)-reducing bacterium from seafloor/subseafloor environments in the Pacific Ocean, and emended description of the genus Geothermobacter
    Ileana Pérez-Rodríguez, Jessica K. Choi, Karla Abuyen, Madeline Tyler, Cynthia Ronkowski, Eric Romero, Anthony Trujillo, Jason Tremblay, Isabella Viney, Pratixaben Savalia, Jan P. Amend
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Oryzicola mucosus gen. nov., sp. nov., a novel slime producing bacterium belonging to the family Phyllobacteriaceae isolated from the rhizosphere of rice plants
    Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Minchung Kang, Yoonseop So, Taegun Seo
    Antonie van Leeuwenhoek.2021; 114(11): 1925.     CrossRef
  • Ostreibacterium oceani gen. nov., sp. nov., isolated from oyster, and description of Ostreibacteriaceae fam. nov.
    Chao-Nan Wang, Feng-Qing Wang, Yuan Liu, Ming-Yi Wang, Zong-Jun Du
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Salegentibacter maritimus sp. nov., isolated from marine coastal sediment
    Feng-Bai Lian, Shan Jiang, Ke-Lei Zhu, Dan-Dan Shang, Jing Zhang, Zong-Jun Du
    Systematic and Applied Microbiology.2021; 44(3): 126209.     CrossRef
  • Solimonas marina sp. nov., isolated from deep seawater of the Pacific Ocean
    Xiupian Liu, Qiliang Lai, Fengqin Sun, Yaping Du, Yingbao Gai, Guangyu Li, Zongze Shao
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Phylo-taxogenomics of the genus Tautonia with descriptions of Tautonia marina sp. nov., Tautonia rosea sp. nov., and emended description of the genus
    Kumar Gaurav, Dhanesh Kumar, U. Jagadeeshwari, A. Shabbir, Ch. Sasikala, Ch.V. Ramana
    Systematic and Applied Microbiology.2021; 44(4): 126229.     CrossRef
  • Reclassification of Algibacter wandonensis as a Later Heterotypic Synonym of Algibacter lectus Based on Whole-Genome Sequence Analysis
    Ang Liu, Hui Wang, Yuan-Yuan Yang, Qing-Jie Xue, Xiu-Zhen Li
    Current Microbiology.2021; 78(3): 1034.     CrossRef
  • Vibrio ziniensis sp. nov., isolated from mangrove sediments
    Jie Wu, Wu Qu, Qiliang Lai, Shengxiang Pei, Tianyou Zhang, Yan Zhuang, Zhuhua Chan, Runying Zeng
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Parasphingopyxis marina sp. nov. isolated from coastal seawater
    Soo-Yeon Choi, Ji-Sung Oh, Dong-Hyun Roh
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Kushneria phosphatilytica sp. nov., a phosphate-solubilizing bacterium isolated from a solar saltern
    Guang-Xun Du, Ling-Yun Qu, Xu-Guang Hong, Cheng-Hua Li, De-Wen Ding, Ping Gao, Qin-Zeng Xu
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Phylogenomic Analyses of the Genus Pseudomonas Lead to the Rearrangement of Several Species and the Definition of New Genera
    Zaki Saati-Santamaría, Ezequiel Peral-Aranega, Encarna Velázquez, Raúl Rivas, Paula García-Fraile
    Biology.2021; 10(8): 782.     CrossRef
  • Marinobacter alexandrii sp. nov., a novel yellow-pigmented and algae growth-promoting bacterium isolated from marine phycosphere microbiota
    Qiao Yang, Qi Feng, Bao-ping Zhang, Jia-jun Gao, Zhi Sheng, Qi-ping Xue, Xiao-ling Zhang
    Antonie van Leeuwenhoek.2021; 114(6): 709.     CrossRef
  • Multi-Omics Characterization of Host-Derived Bacillus spp. Probiotics for Improved Growth Performance in Poultry
    Dwi Susanti, Alyssa Volland, Nilesh Tawari, Nielson Baxter, Dharanesh Gangaiah, Germán Plata, Akshitha Nagireddy, Troy Hawkins, Shrinivasrao P. Mane, Arvind Kumar
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Salibaculum halophilum gen. nov., sp. nov. and Salibaculum griseiflavum sp. nov., in the family Rhodobacteraceae
    Ke-Lei Zhu, Xiao-Qun Wang, Tian-Shu Zhang, Dan-Dan Shang, Zong-Jun Du
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Aquabacterium terrae sp. nov., isolated from soil
    Ram Hari Dahal, Ji Yeon Han, Hyosun Lee, Dhiraj Kumar Chaudhary, Dong-Uk Kim
    Archives of Microbiology.2021; 203(6): 3183.     CrossRef
  • Safety Assessment of Lactiplantibacillus (formerly Lactobacillus) plantarum Q180
    Yoo Jin Kwon, Byung Hee Chun, Hye Su Jung, Jaeryang Chu, Hyunchae Joung, Sung Yurb Park, Byoung Kook Kim, Che Ok Jeon
    Journal of Microbiology and Biotechnology.2021; 31(10): 1420.     CrossRef
  • Collimonas silvisoli sp. nov. and Collimonas humicola sp. nov., two novel species isolated from forest soil
    Jiali Li, Mingkai Pan, Xianjiao Zhang, Yang Zhou, Guang-Da Feng, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Flavobacterium tagetis sp. nov., a novel urea-hydrolysing bacterium isolated from the roots of Tagetes patula
    Geeta Chhetri, Inhyup Kim, Minchung Kang, Jiyoun Kim, Yoonseop So, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Croceicoccus bisphenolivorans sp. nov., a bisphenol A-degrading bacterium isolated from seawater
    Jiangwei Li, Anyi Hu, Min Lv, Chang-Ping Yu
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Vineibacter terrae gen. nov., sp. nov., an ammonium-assimilating and nitrate-reducing bacterium isolated from vineyard soil
    Shih-Yao Lin, Asif Hameed, Chia-Fang Tsai, Chiu-Chung Young
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Geomesophilobacter sediminis gen. nov., sp. nov., Geomonas propionica sp. nov. and Geomonas anaerohicana sp. nov., three novel members in the family Geobacterecace isolated from river sediment and paddy soil
    Zhengcheng Zhang, Zhenxing Xu, Yoko Masuda, Xueding Wang, Natsumi Ushijima, Yutaka Shiratori, Keishi Senoo, Hideomi Itoh
    Systematic and Applied Microbiology.2021; 44(5): 126233.     CrossRef
  • Rouxiella aceris sp. nov., isolated from tree sap and the emended description of the genus Rouxiella
    Soon Dong Lee, Hong Lim Yang, In Seop Kim
    Antonie van Leeuwenhoek.2021; 114(7): 1013.     CrossRef
  • Pseudomarimonas arenosa gen. nov., sp. nov. isolated from marine sand
    Veeraya Weerawongwiwat, Jong-Hwa Kim, Jung-Hoon Yoon, Jung-Sook Lee, Ampaitip Sukhoom, Wonyong Kim
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Chitinophaga fulva sp. nov., isolated from forest soil
    Ram Hari Dahal, Dhiraj Kumar Chaudhary, Dong-Uk Kim, Jaisoo Kim
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Horizontal Gene Transfer of Genes Encoding Copper-Containing Membrane-Bound Monooxygenase (CuMMO) and Soluble Di-iron Monooxygenase (SDIMO) in Ethane- and Propane-Oxidizing Rhodococcus Bacteria
    Bin Zou, Ying Huang, Pan-Pan Zhang, Xiao-Ming Ding, Huub J. M. Op den Camp, Zhe-Xue Quan, Alfons J. M. Stams
    Applied and Environmental Microbiology.2021;[Epub]     CrossRef
  • Arachidicoccus soli sp. nov., a bacterium isolated from soil
    Shin Ae Lee, Tae-Wan Kim, Mee-Kyung Sang, Jaekyeong Song, Soon-Wo Kwon, Hang-Yeon Weon
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Quantitative Real-Time PCR Assay for the Detection of Pectobacterium parmentieri, a Causal Agent of Potato Soft Rot
    Anna A. Lukianova, Peter V. Evseev, Alexander A. Stakheev, Irina B. Kotova, Sergey K. Zavriev, Alexander N. Ignatov, Konstantin A. Miroshnikov
    Plants.2021; 10(9): 1880.     CrossRef
  • Phylogenomic Framework for Taxonomic Delineation of Paracoccus spp. and Exploration of Core-Pan Genome
    Akshita Puri, Abhay Bajaj, Sukanya Lal, Yogendra Singh, Rup Lal
    Indian Journal of Microbiology.2021; 61(2): 180.     CrossRef
  • Echinicola arenosa sp. nov., isolated from marine sand
    Jihye Baek, Veeraya Weerawongwiwat, Jong-Hwa Kim, Jung-Hoon Yoon, Jung-Sook Lee, Ampaitip Sukhoom, Wonyong Kim
    Archives of Microbiology.2021; 203(9): 5675.     CrossRef
  • Cold-shock gene cspC in the genome of Massilia polaris sp. nov. revealed cold-adaptation
    Ram Hari Dahal, Dhiraj Kumar Chaudhary, Dong-Uk Kim, Jaisoo Kim
    Antonie van Leeuwenhoek.2021; 114(8): 1275.     CrossRef
  • Complete genome sequence of Streptomyces sp. HSG2 from rhizosphere soil of mangrove in Qingmei Gang, Sanya
    Shengxiang Pei, Siwen Niu, Fuquan Xie, Shuang Zhang, Wenjing Wang, Gaiyun Zhang
    Archives of Microbiology.2021; 203(6): 3519.     CrossRef
  • Martelella alba sp. nov., isolated from mangrove rhizosphere soil within the Beibu Gulf
    Mi Li, Chenghai Gao, Yuyao Feng, Kai Liu, Pei Cao, Yonghong Liu, Xiangxi Yi
    Archives of Microbiology.2021; 203(4): 1779.     CrossRef
  • Photobacterium arenosum sp. nov., isolated from marine sediment sand
    Veeraya Weerawongwiwat, Seokmin Yoon, Jong-Hwa Kim, Jung-Hoon Yoon, Jung Sook Lee, Ampaitip Sukhoom, Wonyong Kim
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Oricola thermophila sp. nov., a marine bacterium isolated from tidal flat sediment and emended description of the genus Oricola Hameed et al. 2015
    Sung-Hyun Yang, Mi-Jeong Park, Kae Kyoung Kwon
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Zeimonas arvi gen. nov., sp. nov., of the family Burkholderiaceae, harboring biphenyl- and phenolic acid-metabolizing genes, isolated from a long-term ecological research field
    Shih-Yao Lin, Asif Hameed, Chia-Fang Tsai, Chiu-Chung Young
    Antonie van Leeuwenhoek.2021; 114(12): 2101.     CrossRef
  • Chitinilyticum piscinae sp. nov., isolated from aquaculture water
    Tao Pei, Juan Du, Yang Liu, Ming-Rong Deng, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Usitatibacter rugosus gen. nov., sp. nov. and Usitatibacter palustris sp. nov., novel members of Usitatibacteraceae fam. nov. within the order Nitrosomonadales isolated from soil
    Selma Vieira, Katharina J. Huber, Meina Neumann-Schaal, Alicia Geppert, Manja Luckner, Gerhard Wanner, Jörg Overmann
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Caenimonas soli sp. nov., isolated from soil
    Ram Hari Dahal, Hyosun Lee, Dhiraj Kumar Chaudhary, Dae-Young Kim, Jigwan Son, Jaisoo Kim, Jong-Ok Ka, Dong-Uk Kim
    Archives of Microbiology.2021; 203(3): 1123.     CrossRef
  • Coprobacter secundus subsp. similis subsp. nov. and Solibaculum mannosilyticum gen. nov., sp. nov., isolated from human feces
    Mitsuo Sakamoto, Nao Ikeyama, Atsushi Toyoda, Takumi Murakami, Hiroshi Mori, Sho Morohoshi, Tadao Kunihiro, Takao Iino, Moriya Ohkuma
    Microbiology and Immunology.2021; 65(6): 245.     CrossRef
  • Mesobacillus harenae sp. nov., isolated from the sandy soil of a cold desert
    Gaosen Zhang, Ruiqi Yang, Tuo Chen, Binglin Zhang, Hui Yang, Xiukun Wu, Haining Gao, Wei Zhang, Guangxiu Liu
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Pedobacter riviphilus sp. nov., isolated from stream sediment
    Hong Sik Im, Yochan Joung, Sang-Seob Lee
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Paraliobacillus salinarum sp. nov., isolated from saline soil in Yingkou, China
    Ya-Lin Yin, Fang-Ling Li, Xian-Yuan Du, Ya-Xi Zhang, Lei Wang
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Leucobacter coleopterorum sp. nov., Leucobacter insecticola sp. nov., and Leucobacter viscericola sp. nov., isolated from the intestine of the diving beetles, Cybister brevis and Cybister lewisianus, and emended description of the genus Leucobacter
    Dong-Wook Hyun, Hojun Sung, Pil Soo Kim, Ji-Hyun Yun, Jin-Woo Bae
    Journal of Microbiology.2021; 59(4): 360.     CrossRef
  • Brevibacterium limosum sp. nov., Brevibacterium pigmenatum sp. nov., and Brevibacterium atlanticum sp. nov., three novel dye decolorizing actinobacteria isolated from ocean sediments
    Shengxiang Pei, Siwen Niu, Fuquan Xie, Wenjing Wang, Shuang Zhang, Gaiyun Zhang
    Journal of Microbiology.2021; 59(10): 898.     CrossRef
  • Saccharobesus litoralis gen. nov., sp. nov., a novel alginate-degrading bacterium isolated from the surface of intertidal algal turf
    Rosyada Amran Amrina, Go Furusawa, Nyok-Sean Lau
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Sphingopyxis microcysteis sp. nov., a novel bioactive exopolysaccharides-bearing Sphingomonadaceae isolated from the Microcystis phycosphere
    Xiao-ling Zhang, Gui-xian Li, Ya-ming Ge, Nurhezreen Md Iqbal, Xi Yang, Zhen-dong Cui, Qiao Yang
    Antonie van Leeuwenhoek.2021; 114(6): 845.     CrossRef
  • Aquisphaera insulae sp. nov., a new member in the family Isosphaeraceae, isolated from the floating island of Loktak lake and emended description of the genus Aquisphaera
    Gaurav Kumar, Khongsai L. Lhingjakim, Jagadeeshwari Uppada, Shabbir Ahamad, Dhanesh Kumar, Gulam Mohammad Kashif, Chintalapati Sasikala, Chintalapati Venkata Ramana
    Antonie van Leeuwenhoek.2021; 114(9): 1465.     CrossRef
  • Description of Lujinxingia vulgaris sp. nov., isolated from coastal sediment via prey-traps
    Shuo Wang, Da-Shuai Mu, Guang-Yu Li, Zong-Jun Du
    Antonie van Leeuwenhoek.2021; 114(11): 1805.     CrossRef
  • Novosphingobium olei sp. nov., with the ability to degrade diesel oil, isolated from oil-contaminated soil and proposal to reclassify Novosphingobium stygium as a later heterotypic synonym of Novosphingobium aromaticivorans
    Dhiraj Kumar Chaudhary, Ram Hari Dahal, Dong-Uk Kim, Jaisoo Kim
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Pontibacter aquaedesilientis sp. nov., isolated from Jeongbang Waterfall, Jeju Island
    Geeta Chhetri, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Aeromicrobium terrae sp. nov., isolated from a maize field
    Shih-Yao Lin, Chia-Fang Tsai, Asif Hameed, Chiu-Chung Young
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • UBCG2: Up-to-date bacterial core genes and pipeline for phylogenomic analysis
    Jihyeon Kim, Seong-In Na, Dongwook Kim, Jongsik Chun
    Journal of Microbiology.2021; 59(6): 609.     CrossRef
  • Engineering Vibrio sp. SP1 for the production of carotenoids directly from brown macroalgae
    Sungwoo Park, Sung Won Cho, Yungyu Lee, Mincheol Choi, Jina Yang, Hojun Lee, Sang Woo Seo
    Computational and Structural Biotechnology Journal.2021; 19: 1531.     CrossRef
  • Aquabacterium soli sp. nov., a novel bacterium isolated from soil under the long-term application of bifenthrin
    Lina Sun, Wei Chen, Kaihua Huang, Weiguang Lyu, Xinhua Gao
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Permianibacter fluminis sp. nov., isolated from a freshwater stream
    Miri S. Park, Jaeho Song, Jaeho Chang, Yochan Joung, Ilnam Kang, Jang-Cheon Cho
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Description of Cohnella zeiphila sp. nov., a bacterium isolated from maize callus cultures
    Eric T. Johnson, Patrick F. Dowd, Christopher D. Skory, Christopher A. Dunlap
    Antonie van Leeuwenhoek.2021; 114(1): 37.     CrossRef
  • Mesorhizobium microcysteis sp. nov., isolated from a culture of Microcystis aeruginosa
    Jaejoon Jung, Ye Lin Seo, Kyeong Ryeol Kim, Hye Yoon Park, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Sphingobacterium micropteri sp. nov. and Sphingobacterium litopenaei sp. nov., isolated from aquaculture water
    Mingxia Zhang, Anzhang Li, Shuaishuai Xu, Meng Chen, Qing Yao, Botao Xiao, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Maritimibacter alexandrii sp. nov., a New Member of Rhodobacteraceae Isolated from Marine Phycosphere
    Xing Wang, Yun Ye, Fei-Fei Xu, Yu-Han Duan, Peng-Fei Xie, Qiao Yang, Xiao-Ling Zhang
    Current Microbiology.2021; 78(11): 3996.     CrossRef
  • Mucilaginibacter glaciei sp. nov. and Mucilaginibacter pankratovii sp. nov., isolated from a glacier on the Tibetan Plateau
    Lei-Lei Yang, Yu Pang, Hong-Can Liu, Yu-Hua Xin, Qing Liu
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Pedobacter endophyticus sp. nov., an endophytic bacterium isolated from Carex pumila
    Yuxin Peng, Lingmin Jiang, Jiyoon Seo, Zhun Li, Hanna Choe, Jae Cheol Jeong, Suk Weon Kim, Young-Min Kim, Cha Young Kim, Jiyoung Lee
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Zongyanglinia huanghaiensis gen. nov., sp. nov., a novel denitrifying bacterium isolated from the yellow sea, and transfer of Pelagicola marinus to Zongyanglinia gen. nov. as Zongyanglinia marinus comb. nov
    Lili Xu, Ang Liu, Yan-Jiao Zhang
    Antonie van Leeuwenhoek.2021; 114(2): 137.     CrossRef
  • Pyomelanin-Producing Brevundimonas vitisensis sp. nov., Isolated From Grape (Vitis vinifera L.)
    Lingmin Jiang, Doeun Jeon, Jueun Kim, Chul Won Lee, Yuxin Peng, Jiyoon Seo, Ju Huck Lee, Jin Hyub Paik, Cha Young Kim, Jiyoung Lee
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Belnapia mucosa sp. nov. and Belnapia arida sp. nov., isolated from desert biocrust
    Esther Molina-Menor, Àngela Vidal-Verdú, Leila Satari, Alba Calonge-García, Javier Pascual, Juli Peretó, Manuel Porcar
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Nocardioides donggukensis sp. nov. and Hyunsoonleella aquatilis sp. nov., isolated from Jeongbang Waterfall on Jeju Island
    Inhyup Kim, Geeta Chhetri, Jiyoun Kim, Minchung Kang, Yoonseop So, Byungjo Lee, Wonhee Jang, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Yangia mangrovi sp. nov., a novel member of the Roseobacter clade isolated from mangrove soil and emended description of Yangia pacifica Dai et al. 2006
    Ashish Verma, Shiva S. Sundharam, Yash Pal, Bhawana Bisht, Pooja Yadav, Srinivasan Krishnamurthi
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Draft genome of a novel methanotrophic Methylobacter sp. from the volcanic soils of Pantelleria Island
    Carmen Hogendoorn, Nunzia Picone, Femke van Hout, Sophie Vijverberg, Lianna Poghosyan, Theo A. van Alen, Jeroen Frank, Arjan Pol, Antonia L. Gagliano, Mike S. M. Jetten, Walter D’Alessandro, Paola Quatrini, Huub J. M. Op den Camp
    Antonie van Leeuwenhoek.2021; 114(3): 313.     CrossRef
  • Strain-Specific Identification and In Vivo Immunomodulatory Activity of Heat-Killed Latilactobacillus sakei K040706
    Kyung-Sook Chung, Jae Woong Choi, Ji-Sun Shin, Seo-Yeon Kim, Hee-Soo Han, Su-Yeon Kim, Kwang-Young Lee, Joo-Yeon Kang, Chang-Won Cho, Hee-Do Hong, Young Kyoung Rhee, Kyung-Tae Lee
    Foods.2021; 10(12): 3034.     CrossRef
  • Zophobihabitans entericus gen. nov., sp. nov., a new member of the family Orbaceae isolated from the gut of a superworm Zophobas morio
    Chih-Horng Kuo, Pin-Yun Huang, Shih-Yi Sheu, Der-Shyan Sheu, Li-Cheng Jheng, Wen-Ming Chen
    International Journal of Systematic and Evolutionary Microbiology.2021;[Epub]     CrossRef
  • Description of Vagococcus coleopterorum sp. nov., isolated from the intestine of the diving beetle, Cybister lewisianus, and Vagococcus hydrophili sp. nov., isolated from the intestine of the dark diving beetle, Hydrophilus acuminatus, and emended descrip
    Dong-Wook Hyun, Euon Jung Tak, Pil Soo Kim, Jin-Woo Bae
    Journal of Microbiology.2021; 59(2): 132.     CrossRef
  • Devosia aurantiaca sp. nov., Isolated from Mountain Soil and Proposal of Albitalea gen. nov. to Replace the Illegitimate Prokaryotic Genus Name Geomonas Khan et al. 2020
    Shehzad Abid Khan, Hyung Min Kim, Byung Hee Chun, Che Ok Jeon
    Current Microbiology.2021; 78(7): 2548.     CrossRef
  • An atlas of bacterial secondary metabolite biosynthesis gene clusters
    Bin Wei, Ao‐Qi Du, Zhen‐Yi Zhou, Cong Lai, Wen‐Chao Yu, Jin‐Biao Yu, Yan‐Lei Yu, Jian‐Wei Chen, Hua‐Wei Zhang, Xue‐Wei Xu, Hong Wang
    Environmental Microbiology.2021; 23(11): 6981.     CrossRef
  • Nesterenkonia sedimenti sp. nov., isolated from marine sediment
    Fuquan Xie, Shengxiang Pei, Yubian Zhang, Yun Tian, Gaiyun Zhang
    Archives of Microbiology.2021; 203(10): 6287.     CrossRef
  • Phylogenomics reveals the evolution of root nodulating alpha- and beta-Proteobacteria (rhizobia)
    Saleh Rahimlou, Mohammad Bahram, Leho Tedersoo
    Microbiological Research.2021; 250: 126788.     CrossRef
  • Mesonia hitae sp. nov., isolated from the seawater of the South Atlantic Ocean
    Ying Zhou, Xiujun Gao, Jingjing Xu, Guizhen Li, Rui Ma, Peisheng Yan, Chunming Dong, Zongze Shao
    International Journal of Systematic and Evolutionary Microbiology.2021;[Epub]     CrossRef
  • Microcella flavibacter sp. nov., isolated from marine sediment, and reclassification of Chryseoglobus frigidaquae, Chryseoglobus indicus, and Yonghaparkia alkaliphila as Microcella frigidaquae comb. nov., Microcella indica nom. nov., and Microcella alkali
    Fuquan Xie, Shengxiang Pei, Xiaoyun Huang, Lina Wang, Jinyan Kou, Gaiyun Zhang
    Antonie van Leeuwenhoek.2021; 114(12): 2133.     CrossRef
  • Hongsoonwoonella zoysiae gen. nov., sp. nov., a new member of the family Stappiaceae isolated from a tidal mudflat
    Soon Dong Lee, Sung-Min Kim, Hong Lim Yang, Yeong-Sik Byeon, In Seop Kim
    Archives of Microbiology.2021; 203(4): 1335.     CrossRef
  • Poseidonibacter parvus sp. nov., isolated from a squid
    Min Ji Kim, Min-gyung Baek, Su-Kyoung Shin, Hana Yi
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Methylomonas albis sp. nov. and Methylomonas fluvii sp. nov.: Two cold-adapted methanotrophs from the river Elbe and emended description of the species Methylovulum psychrotolerans
    Ingeborg Bussmann, Fabian Horn, Michael Hoppert, Karl-Walter Klings, Anke Saborowski, Julia Warnstedt, Susanne Liebner
    Systematic and Applied Microbiology.2021; 44(6): 126248.     CrossRef
  • Chitinibacter bivalviorum sp. nov., isolated from the gut of the freshwater mussel Anodonta arcaeformis
    Jee-Won Choi, Jae-Yun Lee, Dong-Wook Hyun, June-Young Lee, Pil Soo Kim, Jeong Eun Han, Yun-Seok Jeong, So-Yeon Lee, Hojun Sung, Euon Jung Tak, Hyun Sik Kim, Jin-Woo Bae
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Aerobic Denitrification and Heterotrophic Sulfur Oxidation in the Genus Halomonas Revealed by Six Novel Species Characterizations and Genome-Based Analysis
    Liping Wang, Zongze Shao
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Horizontal Gene Transfer and Genomic Erosion Shape Functional Differences of the Two-Partner Secretion Toxin Exla in the Genus Pseudomonas
    Viviana Job, Laura Gomez-Valero, Adèle Renier, Christophe Rusniok, Stéphanie Bouillot, Viviane Chenal-Francisque, Erwan Gueguen, Annie Adrait, Mylène Robert-Genthon, Katy Jeannot, Peter Panchev, Sylvie Elsen, Marie-Odile Fauvarque, Yohann Couté, Carmen Bu
    SSRN Electronic Journal .2021;[Epub]     CrossRef
  • Schlegelella koreensis sp. nov., isolated from evaporator core of automobile air conditioning system
    Dhiraj Kumar Chaudhary, Hyosun Lee, Ram Hari Dahal, Dong-Uk Kim
    Archives of Microbiology.2021; 203(5): 2373.     CrossRef
  • Chryseobacterium potabilaquae sp. nov., Chryseobacterium aquaeductus sp. nov. and Chryseobacterium fistulae sp. nov., from drinking water systems
    Teresa Lucena, María A. Ruvira, M. Carmen Macián, David R. Arahal, Rosa Aznar, María J. Pujalte
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Flavobacterium undicola sp. nov., isolated from a freshwater lake
    Wen-Ming Chen, Yi-Ru Xie, Soon-Wo Kwon, Shih-Yi Sheu
    Archives of Microbiology.2021; 203(3): 989.     CrossRef
  • Flavobacterium difficile sp. nov., isolated from a freshwater waterfall
    Wen-Ming Chen, Ya-Xiu You, Chiu-Chung Young, Shih-Yao Lin, Shih-Yi Sheu
    Archives of Microbiology.2021; 203(7): 4449.     CrossRef
  • Salipiger mangrovisoli sp. nov., isolated from mangrove soil and the proposal for the reclassification of Paraphaeobacter pallidus as Salipiger pallidus comb. nov.
    Juan Du, Yang Liu, Tao Pei, Ming-Rong Deng, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Classification of uncultivated anammox bacteria and Candidatus Uabimicrobium into new classes and provisional nomenclature as Candidatus Brocadiia classis nov. and Candidatus Uabimicrobiia classis nov. of the phylum Planctomycetes and novel family Candida
    Tushar Lodha, Simran Narvekar, Prachi Karodi
    Systematic and Applied Microbiology.2021; 44(6): 126272.     CrossRef
  • Sulfurimonas indica sp. nov., a hydrogen- and sulfur-oxidizing chemolithoautotroph isolated from a hydrothermal sulfide chimney in the Northwest Indian Ocean
    Qitao Hu, Shasha Wang, Qiliang Lai, Zongze Shao, Lijing Jiang
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Pontibacter cellulosilyticus sp. nov., a carboxymethyl cellulose-hydrolysing bacterium isolated from coastal water
    Minchung Kang, Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Chitinophaga rhizophila sp. nov., isolated from rhizosphere soil of banana
    Xian-Jiao Zhang, Guang-Da Feng, Fan Yang, Honghui Zhu, Qing Yao
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Jinshanibacter allomyrinae sp. nov., isolated from larvae of Allomyrina dichotoma, proposal of Insectihabitans xujianqingii gen. nov., comb. nov. and emended descriptions of the genera Jinshanibacter, Limnobaculum and Pragia
    Soon Dong Lee, Yeong-Sik Byeon, Sung-Min Kim, Hong Lim Yang, In Seop Kim
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Revealing taxon-specific heavy metal-resistance mechanisms in denitrifying phosphorus removal sludge using genome-centric metaproteomics
    Yuan Lin, Liye Wang, Ke Xu, Kan Li, Hongqiang Ren
    Microbiome.2021;[Epub]     CrossRef
  • Development of qPCR Detection Assay for Potato Pathogen Pectobacterium atrosepticum Based on a Unique Target Sequence
    Anna A. Lukianova, Peter V. Evseev, Alexander A. Stakheev, Irina B. Kotova, Sergey K. Zavriev, Alexander N. Ignatov, Konstantin A. Miroshnikov
    Plants.2021; 10(2): 355.     CrossRef
  • Marivivens aquimaris sp. nov., isolated from seawater
    Jeong Ah Kim, Binna Lee, Ji Young Kang, Jae Jun Song, Jong Hyun Choi
    Archives of Microbiology.2021; 203(6): 3229.     CrossRef
  • Lysobacter arenosi sp. nov. and Lysobacter solisilvae sp. nov. isolated from soil
    Kyeong Ryeol Kim, Kyung Hyun Kim, Shehzad Abid Khan, Hyung Min Kim, Dong Min Han, Che Ok Jeon
    Journal of Microbiology.2021; 59(8): 709.     CrossRef
  • Sediminibacterium soli sp. nov., isolated from soil
    Shijuan Wu, Limin Zhong, Shuijiao Liao, Tengfei Li, Zijie Zhou, Gejiao Wang
    Archives of Microbiology.2021; 203(3): 967.     CrossRef
  • Rhodobacter amnigenus sp. nov. and Rhodobacter ruber sp. nov., isolated from freshwater habitats
    Wen-Ming Chen, Ting-Hsuan Chang, Che-Chia Yang, Der-Shyan Sheu, Li-Cheng Jheng, Shih-Yi Sheu
    International Journal of Systematic and Evolutionary Microbiology.2021;[Epub]     CrossRef
  • Alcanivorax profundimaris sp. nov., a Novel Marine Hydrocarbonoclastic Bacterium Isolated from Seawater and Deep-Sea Sediment
    Chunming Dong, Qiliang Lai, Xiupian Liu, Li Gu, Yu Zhang, Zhangxian Xie, Dazhi Wang, Zongze Shao
    Current Microbiology.2021; 78(3): 1053.     CrossRef
  • Ornithobacterium rhinotracheale: MALDI-TOF MS and Whole Genome Sequencing Confirm That Serotypes K, L and M Deviate from Well-Known Reference Strains and Numerous Field Isolates
    Merima Alispahic, Lukas Endler, Michael Hess, Claudia Hess
    Microorganisms.2021; 9(5): 1006.     CrossRef
  • Geomonas silvestris sp. nov., Geomonas paludis sp. nov. and Geomonas limicola sp. nov., isolated from terrestrial environments, and emended description of the genus Geomonas
    Hideomi Itoh, Zhenxing Xu, Yoko Masuda, Natsumi Ushijima, Chie Hayakawa, Yutaka Shiratori, Keishi Senoo
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Marinobacter mangrovi sp. nov., isolated from mangrove sediment
    En Yi, Zongze Shao, Guizhen Li, Xiaobo Liang, Meixian Zhou
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Paraneptunicella aestuarii gen. nov., sp. nov., a member of the family Alteromonadaceae isolated from seawater in East China Sea
    Yanzhu Zhang, Shufen He, Liufei Shi, Yang Liu, Deqiang Mao, Biying Liu, Xiaoping He, Bahareh Nowruzi, Dawoon Jung, Weiyan Zhang, Lijian Ding, Shan He, Liwei Liu
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Sulfurimonas sediminis sp. nov., a novel hydrogen- and sulfur-oxidizing chemolithoautotroph isolated from a hydrothermal vent at the Longqi system, southwestern Indian ocean
    Shasha Wang, Zongze Shao, Qiliang Lai, Xuewen Liu, Shaobin Xie, Lijing Jiang, Suping Yang
    Antonie van Leeuwenhoek.2021; 114(6): 813.     CrossRef
  • Dyadobacter sandarakinus sp. nov., isolated from Arctic tundra soil, and emended descriptions of Dyadobacter alkalitolerans, Dyadobacter koreensis and Dyadobacter psychrophilus
    Yongping Zhang, Xiaoya Peng, Kun Qin, Jia Liu, Qiang Xu, Jingjing Niu, Yanyan Zheng, Fang Peng
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Current Status and Future Strategies to Increase Secondary Metabolite Production from Cyanobacteria
    Yujin Jeong, Sang-Hyeok Cho, Hookeun Lee, Hyung-Kyoon Choi, Dong-Myung Kim, Choul-Gyun Lee, Suhyung Cho, Byung-Kwan Cho
    Microorganisms.2020; 8(12): 1849.     CrossRef
  • Description of Three Novel Members in the Family Geobacteraceae, Oryzomonas japonicum gen. nov., sp. nov., Oryzomonas sagensis sp. nov., and Oryzomonas ruber sp. nov.
    Zhenxing Xu, Yoko Masuda, Chie Hayakawa, Natsumi Ushijima, Keisuke Kawano, Yutaka Shiratori, Keishi Senoo, Hideomi Itoh
    Microorganisms.2020; 8(5): 634.     CrossRef
  • Hypericibacter terrae gen. nov., sp. nov. and Hypericibacter adhaerens sp. nov., two new members of the family Rhodospirillaceae isolated from the rhizosphere of Hypericum perforatum
    Zahra Noviana, Selma Vieira, Javier Pascual, Serge Alain Tanemossu Fobofou, Manfred Rohde, Cathrin Spröer, Boyke Bunk, Jorg Overmann
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(3): 1850.     CrossRef
  • Mucilaginibacter celer sp. nov. and Aquirhabdus parva gen. nov., sp. nov., isolated from freshwater
    MinJi Kim, Su-Kyoung Shin, Hana Yi
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(10): 5479.     CrossRef
  • Methylotenera oryzisoli sp. nov., a lanthanide-dependent methylotrophic bacteria isolated from rice field soil
    Haoxin Lv, Nurettin Sahin, Akio Tani
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(4): 2713.     CrossRef
  • Lewinella aurantiaca sp. nov., a carotenoid pigment-producing bacterium isolated from surface seawater
    Inhyup Kim, Geeta Chhetri, Jiyoun Kim, Minchung Kang, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(12): 6180.     CrossRef
  • Pseudomonas kitaguniensis sp. nov., a pathogen causing bacterial rot of Welsh onion in Japan
    Hiroyuki Sawada, Takashi Fujikawa, Yoshie Nishiwaki, Harukuni Horita
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(5): 3018.     CrossRef
  • Sandaracinomonas limnophila gen. nov., sp. nov., a new member of the family Cytophagaceae isolated from a freshwater mesocosm
    Wen-Ming Chen, Cheng-Ye Cai, Shih-Yi Sheu
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(4): 2178.     CrossRef
  • Use of Newly Designed Primers for Quantification of Complete Ammonia-Oxidizing (Comammox) Bacterial Clades and Strict Nitrite Oxidizers in the Genus Nitrospira
    Ran Jiang, Jian-Gong Wang, Ting Zhu, Bin Zou, Dan-Qi Wang, Sung-Keun Rhee, Dong An, Zhi-Yuan Ji, Zhe-Xue Quan, Alfons J. M. Stams
    Applied and Environmental Microbiology.2020;[Epub]     CrossRef
  • Importance of Defluviitalea raffinosedens for Hydrolytic Biomass Degradation in Co-Culture with Hungateiclostridium thermocellum
    Regina Rettenmaier, Martina Schneider, Bernhard Munk, Michael Lebuhn, Sebastian Jünemann, Alexander Sczyrba, Irena Maus, Vladimir Zverlov, Wolfgang Liebl
    Microorganisms.2020; 8(6): 915.     CrossRef
  • Flavobacterium restrictum sp. nov., Flavobacterium rhamnosiphilum sp. nov., and Flavobacterium zepuense sp. nov. isolated from glaciers
    Guo-Qing Zhang, Lei-Lei Yang, Qing Liu, Hong-Can Liu, Yu-Guang Zhou, Yu-Hua Xin
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(8): 4583.     CrossRef
  • Arenimonas terrae sp. nov., isolated from orchard soil
    Dong Min Han, Byung Hee Chun, Hyung Min Kim, Shehzad Abid Khan, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(1): 537.     CrossRef
  • Morphologically Different Pectobacterium brasiliense Bacteriophages PP99 and PP101: Deacetylation of O-Polysaccharide by the Tail Spike Protein of Phage PP99 Accompanies the Infection
    Anna A. Lukianova, Mikhail M. Shneider, Peter V. Evseev, Anna M. Shpirt, Eugenia N. Bugaeva, Anastasia P. Kabanova, Ekaterina A. Obraztsova, Kirill K. Miroshnikov, Sofiya N. Senchenkova, Alexander S. Shashkov, Stepan V. Toschakov, Yuriy A. Knirel, Alexand
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Shedding light on biogas: Phototrophic biofilms in anaerobic digesters hold potential for improved biogas production
    Christian Abendroth, Adriel Latorre-Pérez, Manuel Porcar, Claudia Simeonov, Olaf Luschnig, Cristina Vilanova, Javier Pascual
    Systematic and Applied Microbiology.2020; 43(1): 126024.     CrossRef
  • Saliniradius amylolyticus gen. nov., sp. nov., isolated from solar saltern sediment
    Heeyoung Kang, Inseong Cha, Haneul Kim, Kiseong Joh
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(1): 267.     CrossRef
  • Pseudomonas lalkuanensis sp. nov., isolated from a bacterial consortia of contaminated soil enriched for the remediation of e-waste
    Vipool Thorat, Kiran Kirdat, Bhavesh Tiwarekar, Elaine DaCosta, Prasenjit Debbarma, Yogesh Shouche, Shivaji Sathe, Reeta Goel, Tushar Lodha, Amit Yadav
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(12): 6468.     CrossRef
  • Denitrobaculum tricleocarpae gen. nov., sp. nov., a marine bacterium from coralline algae Tricleocarpa sp
    Guanghua Wang, Dahao Tang, Guangyu Li, Shuailiang Xu, Ge Dang, Hongfei Su, Zhiheng Liao, Biao Chen, Wen Huang, Jiayuan Liang, Kefu Yu
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(5): 3335.     CrossRef
  • Roseovarius gahaiensis sp. nov., isolated from Gahai Saline Lake, PR China
    Xia Sun, Fang Wang, Yang Liu, Ying Lu
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(10): 5330.     CrossRef
  • Bacillus yapensis sp. nov., a novel piezotolerant bacterium isolated from deep-sea sediment of the Yap Trench, Pacific Ocean
    Xiashutong Xu, Libo Yu, Guangxin Xu, Qilin Wang, Shiping Wei, Xixiang Tang
    Antonie van Leeuwenhoek.2020; 113(3): 389.     CrossRef
  • Description of Luteithermobacter gelatinilyticus gen. nov., sp. nov., and Paremcibacter congregatus gen. nov., comb. nov. via reclassification of the genus Emcibacter
    Mi-Jeong Park, Teddy Namirimu, Sung-Hyun Yang, Kae Kyoung Kwon
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(8): 4691.     CrossRef
  • Genetic Organization of the aprX-lipA2 Operon Affects the Proteolytic Potential of Pseudomonas Species in Milk
    Christopher Maier, Christopher Huptas, Mario von Neubeck, Siegfried Scherer, Mareike Wenning, Genia Lücking
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Nonomuraea nitratireducens sp. nov., a new actinobacterium isolated from Suaeda australis Moq. rhizosphere
    Yixin Ou, Yong Sheng, Xiaojing Hu, Dongjin Leng, Jiafu Huang, Zhiyu Hu, Linquan Bai, Zixin Deng, Qianjin Kang, Yingying Wu
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(9): 5026.     CrossRef
  • Muricauda oceani sp. nov., isolated from the East Pacific Ocean
    Bingxia Dong, Sidong Zhu, Ting Chen, Na Ren, Xiunuan Chen, Yong Chen, Zehao Xue, Xudong Shen, Yizhe Huang, Jifang Yang, Jigang Chen
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(6): 3839.     CrossRef
  • Sphingobium fluviale sp. nov., isolated from a river
    Shih-Yi Sheu, Ya-Ping Guo, Soon-Wo Kwon, Wen-Ming Chen
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(2): 827.     CrossRef
  • Characterization of Staphylococcus intermedius Group Isolates Associated with Animals from Antarctica and Emended Description of Staphylococcus delphini
    Veronika Vrbovská, Ivo Sedláček, Michal Zeman, Pavel Švec, Vojtěch Kovařovic, Ondrej Šedo, Monika Laichmanová, Jiří Doškař, Roman Pantůček
    Microorganisms.2020; 8(2): 204.     CrossRef
  • Variovorax beijingensis sp. nov., a novel plant-associated bacterial species with plant growth-promoting potential isolated from different geographic regions of Beijing, China
    Jun-lian Gao, Yu-chen Sun, Jing Xue, Pengbo Sun, Hui Yan, Mohammad Sayyar Khan, Li-wei Wang, Xiuhai Zhang, Jian-guang Sun
    Systematic and Applied Microbiology.2020; 43(6): 126135.     CrossRef
  • Aliikangiella coralliicola sp. nov., a bacterium isolated from coral Porites lutea, and proposal of Pleioneaceae fam. nov. to accommodate Pleionea and Aliikangiella
    Guanghua Wang, Ge Dang, Shuailiang Xu, Jianfeng Liu, Hongfei Su, Jiayuan Liang, Wen Huang, Yinghui Wang, Kefu Yu
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(11): 5880.     CrossRef
  • Jeotgalibaca ciconiae sp. nov., isolated from the faeces of an Oriental stork
    So-Yeon Lee, Woorim Kang, Pil Soo Kim, Hyun Sik Kim, Hojun Sung, Na-Ri Shin, Ji-Hyun Yun, Jae-Yun Lee, June-Young Lee, Mi-Ja Jung, Yun-Seok Jeong, Euon Jung Tak, Jeong Eun Han, Dong-Wook Hyun, Myung-Suk Kang, Ki-Eun Lee, Byoung-Hee Lee, Jin-Woo Bae
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(5): 3247.     CrossRef
  • Aquabacterium lacunae sp. nov., isolated from a freshwater pond
    Wen-Ming Chen, Tzu-Ying Chen, Soon-Wo Kwon, Shih-Yi Sheu
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(4): 2888.     CrossRef
  • Zoogloea dura sp. nov., a N2-fixing bacterium isolated from forest soil and emendation of the genus Zoogloea and the species Zoogloea oryzae and Zoogloea ramigera
    Ram Hari Dahal, Dhiraj Kumar Chaudhary, Dong-Uk Kim, Jaisoo Kim
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(10): 5312.     CrossRef
  • Roseimaritima sediminicola sp. nov., a new member of Planctomycetaceae isolated from Chilika lagoon
    Dhanesh Kumar, Kumar Gaurav, Jagadeeshwari U, Deepshikha G, Sasikala Ch., Ramana Ch.V.
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(4): 2616.     CrossRef
  • Lactobacillus jinshani sp. nov., isolated from solid-state vinegar culture of Zhenjiang aromatic vinegar
    Yongjian Yu, Xin Li, Junhong Zhang, Li-Juan Chai, Zhen-Ming Lu, Zheng-Hong Xu
    Antonie van Leeuwenhoek.2020; 113(1): 43.     CrossRef
  • Aquirufa rosea sp. nov., isolated from a freshwater lake
    Shih-Yi Sheu, Tzu-Ying Chen, Wen-Ming Chen
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(5): 3145.     CrossRef
  • Staphylococcus borealis sp. nov., isolated from human skin and blood
    Maria Pain, Runa Wolden, Daniel Jaén-Luchoro, Francisco Salvà-Serra, Beatriz Piñeiro Iglesias, Roger Karlsson, Claus Klingenberg, Jorunn Pauline Cavanagh
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(12): 6067.     CrossRef
  • Exploring the Diversity Within the Genus Francisella – An Integrated Pan-Genome and Genome-Mining Approach
    Rajender Kumar, Jeanette E. Bröms, Anders Sjöstedt
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Mesonia oceanica sp. nov., isolated from oceans during the Tara oceans expedition, with a preference for mesopelagic waters
    Teresa Lucena, Isabel Sanz-Sáez, David R. Arahal, Silvia G. Acinas, Olga Sánchez, Carlos Pedrós-Alió, Rosa Aznar, María J. Pujalte
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(7): 4329.     CrossRef
  • Jiella pacifica sp. nov., isolated from the West Pacific Ocean
    Zehao Xue, Sidong Zhu, Xiunuan Chen, Ting Chen, Na Ren, Yong Chen, Bingxia Dong, Xudong Shen, Yizhe Huang, Jifang Yang, Jigang Chen
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(7): 4345.     CrossRef
  • Sphingomonas lacunae sp. nov., isolated from a freshwater pond
    Shih-Yi Sheu, Che-Chia Yang, Der-Shyan Sheu, Jyh-Ming Tsai, Wen-Ming Chen
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(11): 5899.     CrossRef
  • Bradymonabacteria, a novel bacterial predator group with versatile survival strategies in saline environments
    Da-Shuai Mu, Shuo Wang, Qi-Yun Liang, Zhao-Zhong Du, Renmao Tian, Yang Ouyang, Xin-Peng Wang, Aifen Zhou, Ya Gong, Guan-Jun Chen, Joy Van Nostrand, Yunfeng Yang, Jizhong Zhou, Zong-Jun Du
    Microbiome.2020;[Epub]     CrossRef
  • Gemmobacter aquarius sp. nov., Runella rosea sp. nov. and Flavobacterium fluviale sp. nov., isolated from the Namhangang River system
    Min-gyung Baek, Su-Kyoung Shin, Hana Yi
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(11): 5640.     CrossRef
  • Sphingobacterium endophyticum sp. nov., a novel endophyte isolated from halophyte
    Yang-Yang Liu, Fang Liu, Yu-Qian Li, Rui-Feng Lei, Qin Ma, Manik Prabhu Narsing Rao, Dilireba Abudourousuli, Zulihumaer Rouzi, Muyesaier Aosiman, Deng-Di An, Wen-Jun Li
    Archives of Microbiology.2020; 202(10): 2771.     CrossRef
  • Sphingomonas montanisoli sp. nov., isolated from mountain soil
    Zixiao Xu, Yuxiao Zhang, Yasir Muhammad, Gejiao Wang
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(6): 3606.     CrossRef
  • Out of the Abyss: Genome and Metagenome Mining Reveals Unexpected Environmental Distribution of Abyssomicins
    Alba Iglesias, Adriel Latorre-Pérez, James E. M. Stach, Manuel Porcar, Javier Pascual
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Pseudomonas xionganensis sp. nov., isolated from Baiyangdian Lake in Xiong'an New Area
    Yingying Zhao, Yunzhen Yang, Fei He, Chao Wang, Jie Feng, Xiumin Zhang
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(12): 6052.     CrossRef
  • Massilia aquatica sp. nov., Isolated from a Subtropical Stream in China
    Hui-Bin Lu, Tong-Chu Deng, Mei-Ying Xu
    Current Microbiology.2020; 77(10): 3185.     CrossRef
  • Duganella rivus sp. nov., Duganella fentianensis sp. nov., Duganella qianjiadongensis sp. nov. and Massilia guangdongensis sp. nov., isolated from subtropical streams in China and reclassification of all species within genus Pseudoduganella
    Hui-Bin Lu, Zhi-Peng Cai, Yong-Gang Yang, Mei-Ying Xu
    Antonie van Leeuwenhoek.2020; 113(8): 1155.     CrossRef
  • Poritiphilus flavus gen. nov., sp. nov., a member of the family Flavobacteriaceae isolated from coral Porites lutea
    Guanghua Wang, Shuailiang Xu, Ge Dang, Jianfeng Liu, Hongfei Su, Biao Chen, Zhiheng Liao, Wen Huang, Jiayuan Liang, Yinghui Wang, Kefu Yu
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(11): 5620.     CrossRef
  • Sphingomonas edaphi sp. nov., a novel species isolated from beach soil in the Republic of Korea
    Hyungdong Kim, Geeta Chhetri, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(1): 522.     CrossRef
  • Thalassocella blandensis gen. nov., sp. nov., a novel member of the family Cellvibrionaceae
    Teresa Lucena, David R. Arahal, Isabel Sanz-Sáez, Silvia G. Acinas, Olga Sánchez, Rosa Aznar, Carlos Pedrós-Alió, María J. Pujalte
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(2): 1231.     CrossRef
  • Hymenobacter terrestris sp. nov. and Hymenobacter lapidiphilus sp. nov., isolated from regoliths in Antarctica
    Ivo Sedláček, Roman Pantůček, Michal Zeman, Pavla Holochová, Ondrej Šedo, Eva Staňková, Pavel Švec, Stanislava Králová, Petra Vídeňská, Lenka Micenková, Urvashi, Suresh Korpole, Rup Lal
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(12): 6364.     CrossRef
  • Reclassification of genus Izhakiella into the family Erwiniaceae based on phylogenetic and genomic analyses
    Lingmin Jiang, Dexin Wang, Ji-Sun Kim, Ju Huck Lee, Dae-Hyuk Kim, Suk Weon Kim, Jiyoung Lee
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(5): 3541.     CrossRef
  • Orrella amnicola sp. nov., isolated from a freshwater river, reclassification of Algicoccus marinus as Orrella marina comb. nov., and emended description of the genus Orrella
    Shih-Yi Sheu, Li-Chu Chen, Che-Chia Yang, Aurelien Carlier, Wen-Ming Chen
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(12): 6381.     CrossRef
  • Allorhizobium terrae sp. nov., isolated from paddy soil, and reclassification of Rhizobium oryziradicis (Zhao et al. 2017) as Allorhizobium oryziradicis comb. nov.
    Shih-Yao Lin, Asif Hameed, Hsin-I Huang, Chiu-Chung Young
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(1): 397.     CrossRef
  • Antrihabitans stalactiti gen. nov., sp. nov., a new member of the family Nocardiaceae isolated from a cave
    Soon Dong Lee, In Seop Kim, Susanne Verbarg, Yochan Joung
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(10): 5503.     CrossRef
  • Methylobacterium terricola sp. nov., a gamma radiation-resistant bacterium isolated from gamma ray-irradiated soil
    Jiyoun Kim, Geeta Chhetri, Inhyup Kim, Byungjo Lee, Wonhee Jang, Myung Kyum Kim, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(4): 2449.     CrossRef
  • Pseudomonas leptonychotis sp. nov., isolated from Weddell seals in Antarctica
    Dana Nováková, Pavel Švec, Michal Zeman, Hans-Jürgen Busse, Ivana Mašlaňová, Roman Pantůček, Stanislava Králová, Lucie Krištofová, Ivo Sedláček
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(1): 302.     CrossRef
  • Tichowtungia aerotolerans gen. nov., sp. nov., a novel representative of the phylum Kiritimatiellaeota and proposal of Tichowtungiaceae fam. nov., Tichowtungiales ord. nov. and Tichowtungiia class. nov.
    Da-Shuai Mu, Liu-Yan Zhou, Qi-Yun Liang, Guan-Jun Chen, Zong-Jun Du
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(9): 5001.     CrossRef
  • Alcanivorax sediminis sp. nov., isolated from deep-sea sediment of the Pacific Ocean
    Xianzhi Liao, Qiliang Lai, Junpeng Yang, Chunming Dong, Dengfeng Li, Zongze Shao
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(7): 4280.     CrossRef
  • Oleiharenicola lentus sp. nov., isolated from irrigation water
    Wen-Ming Chen, Tzu-Ying Chen, Che-Chia Yang, Shih-Yi Sheu
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(5): 3440.     CrossRef
  • Aestuariirhabdus litorea gen. nov., sp. nov., isolated from a sea tidal flat and proposal of Aestuariirhabdaceae fam. nov.
    Shehzad Abid Khan, Hye Su Jung, Hyung Min Kim, Jeill Oh, Sang-Suk Lee, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(4): 2239.     CrossRef
  • Larkinella punicea sp. nov., isolated from manganese mine soil
    Zijie Zhou, Lin Zhu, Yixuan Dong, Xian Xia, Shijuan Wu, Gejiao Wang
    Archives of Microbiology.2020; 202(9): 2517.     CrossRef
  • Persicimonas caeni gen. nov., sp. nov., the Representative of a Novel Wide-Ranging Predatory Taxon in Bradymonadales
    Shuo Wang, Dashuai Mu, Zong-Jun Du
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Distribution and conservation of known secondary metabolite biosynthesis gene clusters in the genomes of geographically diverse Microcystis aeruginosa strains
    Leanne A. Pearson, Nicholas D. Crosbie, Brett A. Neilan
    Marine and Freshwater Research.2020; 71(5): 701.     CrossRef
  • Terricaulis silvestris gen. nov., sp. nov., a novel prosthecate, budding member of the family Caulobacteraceae isolated from forest soil
    Selma Vieira, Javier Pascual, Christian Boedeker, Alicia Geppert, Thomas Riedel, Manfred Rohde, Jörg Overmann
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(9): 4966.     CrossRef
  • Description of Azotobacter chroococcum subsp. isscasi subsp. nov. isolated from paddy soil and establishment of Azotobacter chroococcum subsp. chroococcum subsp. nov.
    Haiyang Jin, Hui Wang, Yanhui Zhang, Tianlong Hu, Zhibin Lin, Benjuan Liu, Jing Ma, Xiaojie Wang, Qi Liu, Xingwu Lin, Zubin Xie
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(3): 2124.     CrossRef
  • Gracilibacillus oryzae sp. nov., isolated from rice seeds
    Shan-Wen He, Xing Wang, He-Bao Guo, Ji-Gang Han, Kyu Kyu Thin, Ju-sheng Gao, Li-An Ma, Xiao-Xia Zhang
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(10): 5467.     CrossRef
  • Senegalimassilia faecalis sp. nov., an anaerobic actinobacterium isolated from human faeces, and emended description of the genus Senegalimassilia
    Kook-Il Han, Ji-Sun Kim, Keun Chul Lee, Mi Kyung Eom, Min Kuk Suh, Han Sol Kim, Seung-Hwan Park, Ju Huck Lee, Se Won Kang, Jam-Eon Park, Byeong Seob Oh, Seung Yeob Yu, Seung-Hyeon Choi, Dong Ho Lee, Hyuk Yoon, Byung-Yong Kim, Je Hee Lee, Jung-Sook Lee
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(3): 1684.     CrossRef
  • Limnobacter alexandrii sp. nov., a thiosulfate-oxidizing, heterotrophic and EPS-bearing Burkholderiaceae isolated from cultivable phycosphere microbiota of toxic Alexandrium catenella LZT09
    Yuhan Duan, Zhiwei Jiang, Zheng Wu, Zhi Sheng, Xi Yang, Jingya Sun, Xiaoling Zhang, Qiao Yang, Xinwei Yu, Jianbo Yan
    Antonie van Leeuwenhoek.2020; 113(11): 1689.     CrossRef
  • Alteromonas profundi sp. nov., isolated from the Indian Ocean
    Xudong Shen, Sidong Zhu, Bingxia Dong, Yong Chen, Zehao Xue, Na Ren, Ting Chen, Xiunuan Chen, Jifang Yang, Jigang Chen
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(8): 4531.     CrossRef
  • Wenzhouxiangella limi sp. nov., isolated from a salt lake
    Xiao-Yu Zhang, Rui Zhang, Jia-Cheng Wang, Ting Zhang, Zong-Jun Du
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(8): 4610.     CrossRef
  • Hymenobacter ginkgonis sp. nov., isolated from bark of Ginkgo biloba
    Inseong Cha, Heeyoung Kang, Haneul Kim, Seokhyeon Bae, Kiseong Joh
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(8): 4760.     CrossRef
  • Maribacter luteus sp. nov., a marine bacterium isolated from intertidal sand of the Yellow Sea
    Ang Liu, Yan-Jiao Zhang, De-Kun Liu, Xiu-Zhen Li
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(5): 3497.     CrossRef
  • Cryobacterium soli sp. nov., isolated from forest soil
    Chunjie Gong, Qiliang Lai, Hanfeng Cai, Yanming Jiang, Hu Liao, Yunfei Liu, Dongsheng Xue
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(1): 675.     CrossRef
  • Flavobacterium supellecticarium sp. nov., isolated from an abandoned construction timber
    Shih-Yao Lin, Wen-Ming Chen, Guan-Hua Huang, Asif Hameed, Chun-Tse Chang, Chia-Fang Tsai, Chiu-Chung Young
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(6): 3731.     CrossRef
  • Rubrivivax albus sp. nov., isolated from a freshwater pond
    Shih-Yi Sheu, Zhi-Hao Li, Chiu-Chung Young, Wen-Ming Chen
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(2): 805.     CrossRef
  • Tabrizicola oligotrophica sp. nov. and Rhodobacter tardus sp. nov., two new species of bacteria belonging to the family Rhodobacteraceae
    Ceshing Sheu, Zhi-Hao Li, Shih-Yi Sheu, Che-Chia Yang, Wen-Ming Chen
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(12): 6266.     CrossRef
  • Spirosoma telluris sp. nov. and Spirosoma arboris sp. nov. isolated from soil and tree bark, respectively
    Heeyoung Kang, Inseong Cha, Haneul Kim, Kiseong Joh
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(10): 5355.     CrossRef
  • Devosia indica sp. nov., isolated from surface seawater in the Indian Ocean
    Danqiu Lin, Yizhe Huang, Yong Chen, Sidong Zhu, Jifang Yang, Jigang Chen
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(1): 340.     CrossRef
  • Brevilactibacter flavus gen. nov., sp. nov., a novel bacterium of the family Propionibacteriaceae isolated from raw milk and dairy products and reclassification of Propioniciclava sinopodophylli as Brevilactibacter sinopodophylli comb. nov.
    Mareike Wenning, Franziska Breitenwieser, Christopher Huptas, Etienne Doll, Benedikt Bächler, Annika Schulz, Andreas Dunkel, Thomas Hofmann, Mario von Neubeck, Hans-Jürgen Busse, Siegfried Scherer
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(4): 2186.     CrossRef
  • Ideonella livida sp. nov., isolated from a freshwater lake
    Wen-Ming Chen, Li-Chu Chen, Der-Shyan Sheu, Jyh-Ming Tsai, Shih-Yi Sheu
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(9): 4942.     CrossRef
  • Jejubacter calystegiae gen. nov., sp. nov., moderately halophilic, a new member of the family Enterobacteriaceae, isolated from beach morning glory
    Lingmin Jiang, Dexin Wang, Jung-Sook Lee, Dae-Hyuk Kim, Jae Cheol Jeong, Cha Young Kim, Suk Weon Kim, Jiyoung Lee
    Journal of Microbiology.2020; 58(5): 357.     CrossRef
  • Hymenobacter setariae sp. nov., isolated from the ubiquitous weedy grass Setaria viridis
    Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Hyungdong Kim, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(6): 3724.     CrossRef
  • Geomonas soli gen. nov., sp. nov., a New Member of the Family Comamonadaceae, Isolated from Soil
    Shehzad Abid Khan, Sang Eun Jeong, Hye Yoon Park, Sang-Suk Lee, Che Ok Jeon
    Current Microbiology.2020; 77(2): 286.     CrossRef
  • Arenibacter lacus sp. nov., Isolated from Chilika Lagoon, India
    Dhanesh Kumar, Nandardhane Smita, Gaurav Kumar, Gandham Suresh, Uppada Jagadeeshwari, Chintalapati Sasikala, Chintalapati Venkata Ramana
    Current Microbiology.2020; 77(12): 4152.     CrossRef
  • Adhaeribacter arboris sp. nov., and Adhaeribacter pallidiroseus sp. nov., novel bacteria isolated from birch tree (Betula platyphylla)
    Heeyoung Kang, Haneul Kim, Inseong Cha, Kiseong Joh
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(12): 6195.     CrossRef
  • Sphingobium algorifonticola sp. nov., isolated from a cold spring
    Wen-Ming Chen, Ya-Ping Guo, Ceshing Sheu, Shih-Yi Sheu
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(1): 309.     CrossRef
  • Distribution of Phototrophic Purple Nonsulfur Bacteria in Massive Blooms in Coastal and Wastewater Ditch Environments
    Akira Hiraishi, Nobuyoshi Nagao, Chinatsu Yonekawa, So Umekage, Yo Kikuchi, Toshihiko Eki, Yuu Hirose
    Microorganisms.2020; 8(2): 150.     CrossRef
  • Rhodovarius crocodyli sp. nov., isolated from a crocodile pond
    Wen-Ming Chen, Yi-Ru Xie, Der-Shyan Sheu, Jyh-Ming Tsai, Shih-Yi Sheu
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(9): 5141.     CrossRef
  • Description of Azoarcus nasutitermitis sp. nov. and Azoarcus rhizosphaerae sp. nov., two nitrogen-fixing species isolated from termite nest and rhizosphere of Ficus religiosa
    Shih-Yao Lin, Asif Hameed, Chia-Fang Tsai, Guan-Hua Huang, Yi-Han Hsu, Chiu-Chung Young
    Antonie van Leeuwenhoek.2020; 113(7): 933.     CrossRef
  • Cohnella fermenti sp. nov., isolated from a fermentation process
    Shih-Yao Lin, Wen-Ming Chen, Asif Hameed, Guan-Hua Huang, Mei-Hua Hung, Chiu-Chung Young
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(4): 2602.     CrossRef
  • Gimesia chilikensis sp. nov., a haloalkali-tolerant planctomycete isolated from Chilika lagoon and emended description of the genus Gimesia
    Dhanesh Kumar, Kumar Gaurav, Sreya PK, Shabbir A., Jagadeeshwari Uppada, Sasikala Ch., Ramana Ch.V.
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(6): 3647.     CrossRef
  • Salinibius halmophilus gen. nov., sp. nov., isolated from a marine solar saltern
    Si-Kai Ling, Hui Zhang, Nan-Nan Wang, Guan-Jun Chen, Zong-Jun Du
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(2): 1079.     CrossRef
  • Metagenomic profiling of ammonia- and methane-oxidizing microorganisms in two sequential rapid sand filters
    Lianna Poghosyan, Hanna Koch, Jeroen Frank, Maartje A.H.J. van Kessel, Geert Cremers, Theo van Alen, Mike S.M. Jetten, Huub J.M. Op den Camp, Sebastian Lücker
    Water Research.2020; 185: 116288.     CrossRef
  • “ Candidatus Desulfobulbus rimicarensis,” an Uncultivated Deltaproteobacterial Epibiont from the Deep-Sea Hydrothermal Vent Shrimp Rimicaris exoculata
    Lijing Jiang, Xuewen Liu, Chunming Dong, Zhaobin Huang, Marie-Anne Cambon-Bonavita, Karine Alain, Li Gu, Shasha Wang, Zongze Shao, Shuang-Jiang Liu
    Applied and Environmental Microbiology.2020;[Epub]     CrossRef
  • Nocardioides convexus sp. nov. and Nocardioides anomalus sp. nov., isolated from soil and mineral water
    Yuna Park, Qingzhen Liu, Soohyun Maeng, Won Jung Choi, Yoonjee Chang, Wan-Taek Im
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(12): 6402.     CrossRef
  • Mesorhizobium alexandrii sp. nov., isolated from phycosphere microbiota of PSTs-producing marine dinoflagellate Alexandrium minutum amtk4
    Xi Yang, Zhiwei Jiang, Jing Zhang, Xin Zhou, Xiaoling Zhang, Lei Wang, Ting Yu, Zhilin Wang, Jinlong Bei, Bo Dong, Zhangyan Dai, Qiao Yang, Zhuang Chen
    Antonie van Leeuwenhoek.2020; 113(7): 907.     CrossRef
  • Description of Massilia rubra sp. nov., Massilia aquatica sp. nov., Massilia mucilaginosa sp. nov., Massilia frigida sp. nov., and one Massilia genomospecies isolated from Antarctic streams, lakes and regoliths
    Pavla Holochová, Ivana Mašlaňová, Ivo Sedláček, Pavel Švec, Stanislava Králová, Vojtěch Kovařovic, Hans-Jürgen Busse, Eva Staňková, Miloš Barták, Roman Pantůček
    Systematic and Applied Microbiology.2020; 43(5): 126112.     CrossRef
  • Paradesulfovibrio onnuriensis gen. nov., sp. nov., a chemolithoautotrophic sulfate-reducing bacterium isolated from the Onnuri vent field of the Indian Ocean and reclassification of Desulfovibrio senegalensis as Paradesulfovibrio senegalensis comb. nov.
    Yun Jae Kim, Jhung-Ahn Yang, Jae Kyu Lim, Mi-Jeong Park, Sung-Hyun Yang, Hyun Sook Lee, Sung Gyun Kang, Jung-Hyun Lee, Kae Kyoung Kwon
    Journal of Microbiology.2020; 58(4): 252.     CrossRef
  • Litorilituus lipolyticus sp. nov., isolated from intertidal sand of the Yellow Sea in China, and emended description of Colwellia asteriadis
    Ang Liu, Yan-Jiao Zhang, Qing-Jie Xue, Hui Wang, Yuan-Yuan Yang, Feng Du, Long-Yu Zhao, Hong-Hua Zhang, Yun-Qing Li, Xiu-Zhen Li
    Antonie van Leeuwenhoek.2020; 113(4): 449.     CrossRef
  • Wocania indica gen. nov., sp. nov., isolated from deep sea hydrothermal sulfide in the northwest Indian Ocean, and proposal to reclassify Flaviramulus ichthyoenteri as Wocania ichthyoenteri comb. nov.
    Yang He, Xiang Zeng, Jinbo Xiong, Qiliang Lai, Jianyang Li, Zongze Shao
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(10): 5488.     CrossRef
  • Whole genome analysis calls for a taxonomic rearrangement of the genus Colwellia
    Ang Liu, Yan-Jiao Zhang, Peng Cheng, Ya-Jie Peng, Jochen Blom, Qing-Jie Xue
    Antonie van Leeuwenhoek.2020; 113(7): 919.     CrossRef
  • Leeia aquatica sp. nov., isolated from freshwater
    Jaeho Song, Yochan Joung, Shan-Hui Li, Juchan Hwang, Jang-Cheon Cho
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(11): 5848.     CrossRef
  • Aurantiacibacter rhizosphaerae sp. nov., isolated from a rhizosphere mudflat of a halophyte and proposal to reclassify Erythrobacter suaedae Lee et al. 2019. and Erythrobacter flavus Yoon et al. 2003 as Aurantiacibacter suaedae comb. nov. and
    Soon Dong Lee, In Seop Kim
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(12): 6257.     CrossRef
  • Hydrogen and Carbon Monoxide-Utilizing Kyrpidia spormannii Species From Pantelleria Island, Italy
    Carmen Hogendoorn, Arjan Pol, Nunzia Picone, Geert Cremers, Theo A. van Alen, Antonina L. Gagliano, Mike S. M. Jetten, Walter D’Alessandro, Paola Quatrini, Huub J. M. Op den Camp
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Fundicoccus ignavus gen. nov., sp. nov., a novel genus of the family Aerococcaceae isolated from bulk tank milk
    Annemarie Siebert, Christopher Huptas, Mareike Wenning, Siegfried Scherer, Etienne V. Doll
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(8): 4774.     CrossRef
  • Flammeovirga pectinis sp. nov., isolated from the gut of the Korean scallop, Patinopecten yessoensis
    Yun-Seok Jeong, Woorim Kang, Hojun Sung, June-Young Lee, Ji-Hyun Yun, Na-Ri Shin, Hyun Sik Kim, So-Yeon Lee, Jeong Eun Han, Jae-Yun Lee, Euon Jung Tak, Pil Soo Kim, Dong-Wook Hyun, Mi-Ja Jung, Tae Woong Whon, Myung-Suk Kang, Ki-Eun Lee, Byoung-Hee Lee, Ji
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(1): 499.     CrossRef
  • High counts of thermophilic spore formers in dairy powders originate from persisting strains in processing lines
    Anna Dettling, Carolin Wedel, Christopher Huptas, Jörg Hinrichs, Siegfried Scherer, Mareike Wenning
    International Journal of Food Microbiology.2020; 335: 108888.     CrossRef
  • Paenibacillus lycopersici sp. nov. and Paenibacillus rhizovicinus sp. nov., isolated from the rhizosphere of tomato (Solanum lycopersicum)
    Shin Ae Lee, Tae-Wan Kim, Jun Heo, Mee-Kyung Sang, Jaekyeong Song, Soon-Wo Kwon, Hang-Yeon Weon
    Journal of Microbiology.2020; 58(10): 832.     CrossRef
  • Cerasibacillus terrae sp. nov., isolated from maize field, and emended description of Cerasibacillus quisquiliarum Nakamura et al. 2004
    Shih-Yao Lin, Chia-Fang Tsai, Asif Hameed, Chiu-Chung Young
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(11): 5725.     CrossRef
  • Microbial community composition and functional potential in Bothnian Sea sediments is linked to Fe and S dynamics and the quality of organic matter
    Olivia Rasigraf, Niels A. G. M. van Helmond, Jeroen Frank, Wytze K. Lenstra, Matthias Egger, Caroline P. Slomp, Mike S. M. Jetten
    Limnology and Oceanography.2020;[Epub]     CrossRef
  • Metagenomic Association Analysis of Gut Symbiont Limosilactobacillus reuteri Without Host-Specific Genome Isolation
    Sein Park, Martin Steinegger, Ho-Seong Cho, Jongsik Chun
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Methylobacterium symbioticum sp. nov., a new species isolated from spores of Glomus iranicum var. tenuihypharum
    Jose Antonio Pascual, Margarita Ros, Jesus Martínez, Francisco Carmona, Antonio Bernabé, Rocío Torres, Teresa Lucena, Rosa Aznar, David R. Arahal, Felix Fernández
    Current Microbiology.2020; 77(9): 2031.     CrossRef
  • Sphingomonas solaris sp. nov., isolated from a solar panel in Boston, Massachusetts
    Kristie Tanner, Christopher P. Mancuso, Juli Peretó, Ahmad S. Khalil, Cristina Vilanova, Javier Pascual
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(3): 1814.     CrossRef
  • Adhaeribacter rhizoryzae sp. nov., a fibrillar matrix-producing bacterium isolated from the rhizosphere of rice plant
    Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Byungjo Lee, Wonhee Jang, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(10): 5382.     CrossRef
  • Genomic Comparison of Insect Gut Symbionts from Divergent Burkholderia Subclades
    Kazutaka Takeshita, Yoshitomo Kikuchi
    Genes.2020; 11(7): 744.     CrossRef
  • Duganella albus sp. nov., Duganella aquatilis sp. nov., Duganella pernnla sp. nov. and Duganella levis sp. nov., isolated from subtropical streams in China
    Huibin Lu, Tongchu Deng, Feifei Liu, Yonghong Wang, Xunan Yang, Meiying Xu
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(6): 3801.     CrossRef
  • Description of Maribellus sediminis sp. nov., a marine nitrogen-fixing bacterium isolated from sediment of cordgrass and mangrove
    Zhaobin Huang, Yuzhong Hu, Qiliang Lai, Yu Guo
    Systematic and Applied Microbiology.2020; 43(4): 126099.     CrossRef
  • Ningiella ruwaisensis gen. nov., sp. nov., a member of the family Alteromonadaceae isolated from marine water of the Arabian Gulf
    Rashmi Fotedar, Matthew E. Caldwell, Krithivasan Sankaranarayanan, Aisha Al -Zeyara, Ameena Al-Malki, Ridhima Kaul, Masoud Al Marri, Hamad S. Al -Shamari, Paul A. Lawson
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(7): 4130.     CrossRef
  • Maribacter algicola sp. nov., isolated from a marine red alga, Porphyridium marinum, and transfer of Maripseudobacter aurantiacus Chen et al. 2017 to the genus Maribacter as Maribacter aurantiacus comb. nov.
    Shehzad Abid Khan, Sang Eun Jeong, Ju Hye Baek, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(2): 797.     CrossRef
  • In silico functional and evolutionary analyses of rubber oxygenases (RoxA and RoxB)
    Vikas Sharma, Fauzul Mobeen, Tulika Prakash
    3 Biotech.2020;[Epub]     CrossRef
  • Improved Metagenomic Taxonomic Profiling Using a Curated Core Gene-Based Bacterial Database Reveals Unrecognized Species in the Genus Streptococcus
    Mauricio Chalita, Sung-min Ha, Yeong Ouk Kim, Hyun-Seok Oh, Seok-Hwan Yoon, Jongsik Chun
    Pathogens.2020; 9(3): 204.     CrossRef
  • Klebsiella indica sp. nov., isolated from the surface of a tomato
    Sukriti Gujarati, Diptaraj Chaudhari, Ashwini Hagir, Mitesh Khairnar, Yogesh Shouche, Praveen Rahi
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(5): 3278.     CrossRef
  • Cupriavidus agavae sp. nov., a species isolated from Agave L. rhizosphere in northeast Mexico
    Ivan Arroyo-Herrera, Jessica Maldonado-Hernández, Fernando-Uriel Rojas-Rojas, Georgina Meza-Radilla, Violeta Larios-Serrato, María-Soledad Vásquez-Murrieta, William B. Whitman, Paulina Estrada-de los Santos
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(7): 4165.     CrossRef
  • Filimonas effusa sp. nov., isolated from a freshwater river
    Wen-Ming Chen, Tzu-Ying Chen, Zhi-Hao Li, Soon-Wo Kwon, Shih-Yi Sheu
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(3): 1508.     CrossRef
  • Duganella lactea sp. nov., Duganella guangzhouensis sp. nov., Duganella flavida sp. nov. and Massilia rivuli sp. nov., isolated from a subtropical stream in PR China and proposal to reclassify Duganella ginsengisoli as Massilia ginsengisoli c
    Huibin Lu, Tongchu Deng, Feifei Liu, Yonghong Wang, Xunan Yang, Meiying Xu
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(8): 4822.     CrossRef
  • Genome-based reclassification of Paenibacillus jamilae Aguilera et al. 2001 as a later heterotypic synonym of Paenibacillus polymyxa (Prazmowski 1880) Ash et al. 1994
    Min-Jung Kwak, Seon-Bin Choi, Sung-min Ha, Eun Hye Kim, Byung-Yong Kim, Jongsik Chun
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(5): 3134.     CrossRef
  • Aequoribacter fuscus gen. nov., sp. nov., a new member of the family Halieaceae, isolated from coastal seawater
    Shan-Hui Li, Jaeho Song, Ilnam Kang, Juchan Hwang, Jang-Cheon Cho
    Journal of Microbiology.2020; 58(6): 463.     CrossRef
  • Psychroflexus maritimus sp. nov., isolated from coastal sediment
    Yan-Lin Zhong, Rui Zhang, Xiao-Yu Zhang, Li-Xue Yu, Meng-Fan Zhao, Zong-Jun Du
    Archives of Microbiology.2020; 202(8): 2127.     CrossRef
  • Ketobacter nezhaii sp. nov., a marine bacterium isolated from coastal sediment
    Jianyang Li, Mingming Qi, Qiliang Lai, Xianhua Liu, Zongze Shao
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(9): 4960.     CrossRef
  • Sphingobacterium chungjuense sp. nov., isolated from a freshwater lake
    Jaeho Song, Yochan Joung, Shan-Hui Li, Juchan Hwang, Jang-Cheon Cho
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(12): 6126.     CrossRef
  • Paracoccus xiamenensis sp. nov., isolated from seawater on the Xiamen
    Lina Lyu, Bin Zhi, Qiliang Lai, Zongze Shao, Zhiqiang Yu
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(7): 4285.     CrossRef
  • Paludisphaera soli sp. nov., a new member of the family Isosphaeraceae isolated from high altitude soil in the Western Himalaya
    Rishabh Kaushik, Meesha Sharma, Kumar Gaurav, U. Jagadeeshwari, A. Shabbir, Ch. Sasikala, Ch. V. Ramana, Maharaj K. Pandit
    Antonie van Leeuwenhoek.2020; 113(11): 1663.     CrossRef
  • Lacibacter luteus sp. nov., isolated from a freshwater river
    Shih-Yi Sheu, Tzu-Ying Chen, Soon-Wo Kwon, Wen-Ming Chen
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(2): 1404.     CrossRef
  • Flavobacterium ichthyis sp. nov., isolated from a fish pond
    Wen-Ming Chen, Che-Chia Yang, Ceshing Sheu, Soon-Wo Kwon, Shih-Yi Sheu
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(9): 5075.     CrossRef
  • Mucilaginibacter agri sp. nov. and Mucilaginibacter humi sp. nov., isolated from soil
    Ye Lin Seo, Shehzad Abid Khan, Hyung Min Kim, Byung Hee Chun, Dong Min Han, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(8): 4616.     CrossRef
  • Ferrimonas sediminicola sp. nov. and Ferrimonas aestuarii sp. nov., Fe(III)-reducing bacteria isolated from marine environments
    Juchan Hwang, Jaeho Song, Yeonjung Lim, Yochan Joung, Jang-Cheon Cho
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(9): 4927.     CrossRef
  • Patiriisocius marinistellae gen. nov., sp. nov., isolated from the starfish Patiria pectinifera, and reclassification of Ulvibacter marinus as a member of the genus Patiriisocius comb. nov.
    Keisuke Kawano, Natsumi Ushijima, Minoru Kihara, Hideomi Itoh
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(7): 4119.     CrossRef
  • Integration of culture-dependent and independent methods provides a more coherent picture of the pig gut microbiome
    Gavin J Fenske, Sudeep Ghimire, Linto Antony, Jane Christopher-Hennings, Joy Scaria
    FEMS Microbiology Ecology.2020;[Epub]     CrossRef
  • Pseudomonas karstica sp. nov. and Pseudomonas spelaei sp. nov., isolated from calcite moonmilk deposits from caves
    Pavel Švec, Marcel Kosina, Michal Zeman, Pavla Holochová, Stanislava Králová, Eva Němcová, Lenka Micenková, Urvashi, Vipin Gupta, Utkarsh Sood, Rup Lal, Suresh Korpole, Ivo Sedláček
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(9): 5131.     CrossRef
  • Extremophilic nitrite-oxidizing Chloroflexi from Yellowstone hot springs
    Eva Spieck, Michael Spohn, Katja Wendt, Eberhard Bock, Jessup Shively, Jeroen Frank, Daniela Indenbirken, Malik Alawi, Sebastian Lücker, Jennifer Hüpeden
    The ISME Journal.2020; 14(2): 364.     CrossRef
  • Novosphingobium ovatum sp. nov., isolated from a freshwater mesocosm
    Wen-Ming Chen, Cheng-Ye Cai, Der-Shyan Sheu, Jyh-Ming Tsai, Shih-Yi Sheu
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(10): 5243.     CrossRef
  • Sunxiuqinia indica sp. nov., isolated from deep sea
    Jianyang Li, Mingming Qi, Qiliang Lai, Guangyi Wang, Zongze Shao
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(7): 4186.     CrossRef
  • Saccharibacillus brassicae sp. nov., an endophytic bacterium isolated from kimchi cabbage (Brassica rapa subsp. pekinensis) seeds
    Lingmin Jiang, Chan Ju Lim, Song-Gun Kim, Jae Cheol Jeong, Cha Young Kim, Dae-Hyuk Kim, Suk Weon Kim, Jiyoung Lee
    Journal of Microbiology.2020; 58(1): 24.     CrossRef
  • Sphingorhabdus lacus sp. nov. and Sphingorhabdus profundilacus sp. nov., isolated from freshwater environments
    Miri Park, Ilsuk Jung, Jaeho Song, Jang-Cheon Cho
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(5): 3202.     CrossRef
  • Novosphingobium umbonatum sp. nov., isolated from a freshwater mesocosm
    Shih-Yi Sheu, Cheng-Ye Cai, Soon-Wo Kwon, Wen-Ming Chen
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(2): 1122.     CrossRef
  • Pseudooceanicola pacificus sp. nov., isolated from deep-sea sediment of the Pacific Ocean
    Lina Lyu, Qiliang Lai, Jianyang Li, Zongze Shao, Zhiqiang Yu
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(7): 4372.     CrossRef
  • Halioglobus maricola sp. nov., isolated from coastal seawater
    Shan-Hui Li, Jaeho Song, Yeonjung Lim, Yochan Joung, Ilnam Kang, Jang-Cheon Cho
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(3): 1868.     CrossRef
  • Cryobacterium ruanii sp. nov. and Cryobacterium breve sp. nov., isolated from glaciers
    Qing Liu, Ji-Hui Tian, Hong-Can Liu, Yu-Guang Zhou, Yu-Hua Xin
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(3): 1918.     CrossRef
  • Prokaryotic sigma factors and their transcriptional counterparts in Archaea and Eukarya
    Ana G. Abril, Jose Luis R. Rama, A. Sánchez-Pérez, Tomás G. Villa
    Applied Microbiology and Biotechnology.2020; 104(10): 4289.     CrossRef
  • Nitratireductor alexandrii sp. nov., from phycosphere microbiota of toxic marine dinoflagellate Alexandrium tamarense
    Zhiwei Jiang, Yuhan Duan, Xi Yang, Bing Yao, Teer Zeng, Xiaoyan Wang, Qi Feng, Min Qi, Qiao Yang, Xiaoling Zhang
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(7): 4390.     CrossRef
  • Croceicoccus sediminis sp. nov., isolated from coastal sediment
    Zhaobin Huang, Aoqiang Zhang, Qiliang Lai, Jianjun Yuan
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(2): 779.     CrossRef
  • Signs of a phyllospheric lifestyle in the genome of the stress-tolerant strain Azospirillum brasilense Az19
    Julia E. García, Maria M. Labarthe, Luciana A. Pagnussat, Melina Amenta, Cecilia M. Creus, Guillermo A. Maroniche
    Systematic and Applied Microbiology.2020; 43(6): 126130.     CrossRef
  • Genomic, metabolic and phenotypic variability shapes ecological differentiation and intraspecies interactions of Alteromonas macleodii
    Hanna Koch, Nora Germscheid, Heike M. Freese, Beatriz Noriega-Ortega, Dominik Lücking, Martine Berger, Galaxy Qiu, Ezequiel M. Marzinelli, Alexandra H. Campbell, Peter D. Steinberg, Jörg Overmann, Thorsten Dittmar, Meinhard Simon, Matthias Wietz
    Scientific Reports.2020;[Epub]     CrossRef
  • Reinekea thalattae sp. nov., a New Species of the Genus Reinekea Isolated from Surface Seawater in Sehwa Beach
    Inhyup Kim, Geeta Chhetri, Jiyoun Kim, Minchung Kang, Taegun Seo
    Current Microbiology.2020; 77(12): 4174.     CrossRef
  • All ANIs are not created equal: implications for prokaryotic species boundaries and integration of ANIs into polyphasic taxonomy
    Marike Palmer, Emma T. Steenkamp, Jochen Blom, Brian P. Hedlund, Stephanus N. Venter
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(4): 2937.     CrossRef
  • Rhizobium indicum sp. nov., isolated from root nodules of pea (Pisum sativum) cultivated in the Indian trans-Himalayas
    Praveen Rahi, Pranoti Giram, Diptaraj Chaudhari, George C. diCenzo, Shashi Kiran, Aastha Khullar, Mahima Chandel, Sayali Gawari, Anagha Mohan, Shraddha Chavan, Bhagyashree Mahajan
    Systematic and Applied Microbiology.2020; 43(5): 126127.     CrossRef
  • Nonlabens xiamenensis sp. nov., isolated from coastal seawater
    Zhaobin Huang, Yaping Du, Qiliang Lai, Zongze Shao
    Antonie van Leeuwenhoek.2019; 112(8): 1263.     CrossRef
  • Amniculibacterium aquaticum gen. nov., sp. nov., a new member of the family Flavobacteriaceae isolated from a stream
    Wen-Ming Chen, Ya-Ping Guo, Ceshing Sheu, Shih-Yi Sheu
    Archives of Microbiology.2019; 201(8): 1119.     CrossRef
  • Discovery of a functional, contracted heme-binding motif within a multiheme cytochrome
    Christina Ferousi, Simon Lindhoud, Frauke Baymann, Eric R. Hester, Joachim Reimann, Boran Kartal
    Journal of Biological Chemistry.2019; 294(45): 16953.     CrossRef
  • Flavobacterium piscinae sp. nov., isolated from a fish pond
    Wen-Ming Chen, Ya-Ping Guo, Soon-Wo Kwon, Shih-Yi Sheu
    International Journal of Systematic and Evolutionary Microbiology .2019; 69(6): 1775.     CrossRef
  • Description of Sphingobium psychrophilum sp. nov., a cold-adapted bacterium isolated from Arctic soil
    Ram Hari Dahal, Dhiraj Kumar Chaudhary, Dong-Uk Kim, Jaisoo Kim
    International Journal of Systematic and Evolutionary Microbiology .2019;[Epub]     CrossRef
  • Uncultured Nitrospina-like species are major nitrite oxidizing bacteria in oxygen minimum zones
    Xin Sun, Linnea F M Kop, Maggie C Y Lau, Jeroen Frank, Amal Jayakumar, Sebastian Lücker, Bess B Ward
    The ISME Journal.2019; 13(10): 2391.     CrossRef
  • Sphingomonas crocodyli sp. nov., isolated from a crocodile pond
    Shih-Yi Sheu, Yi-Ru Xie, Soon-Wo Kwon, Ceshing Sheu, Wen-Ming Chen
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(7): 2153.     CrossRef
  • N-glycan Utilization by Bifidobacterium Gut Symbionts Involves a Specialist β-Mannosidase
    Rosa Lorizolla Cordeiro, Renan Augusto Siqueira Pirolla, Gabriela Felix Persinoti, Fábio Cesar Gozzo, Priscila Oliveira de Giuseppe, Mario Tyago Murakami
    Journal of Molecular Biology.2019; 431(4): 732.     CrossRef
  • Identification of Molecular Markers That Are Specific to the Class Thermoleophilia
    Danyu Hu, Yang Zang, Yingjin Mao, Beile Gao
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Neobacillus endophyticus sp. nov., an endophytic bacterium isolated from Selaginella involvens roots
    Lingmin Jiang, Myoung Hui Lee, Jae Cheol Jeong, Dae-Hyuk Kim, Cha Young Kim, Suk Weon Kim, Jiyoung Lee
    International Journal of Systematic and Evolutionary Microbiology .2019;[Epub]     CrossRef
  • Stagnimonas aquatica gen. nov., sp. nov., a new member of the family Nevskiaceae isolated from a freshwater mesocosm
    Shih-Yi Sheu, Tzu-Ying Chen, Chiu-Chung Young, Wen-Ming Chen
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(6): 1606.     CrossRef
  • Hydrocarboniclastica marina gen. nov., sp. nov., a marine hydrocarbonoclastic bacterium isolated from an in situ enriched hydrocarbon-degrading consortium in sea sediment
    Chunming Dong, Tiantian Ma, Renju Liu, Qiliang Lai, Zongze Shao
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(8): 2250.     CrossRef
  • Anaerosacchariphilus polymeriproducens gen. nov., sp. nov., an anaerobic bacterium isolated from a salt field
    Wonduck Kim, Sung-Hyun Yang, Mi-Jeong Park, Jihye Oh, Jung-Hyun Lee, Kae Kyoung Kwon
    International Journal of Systematic and Evolutionary Microbiology .2019; 69(7): 1934.     CrossRef
  • Flavobacterium baculatum sp. nov., a carotenoid and flexirubin-type pigment producing species isolated from flooded paddy field
    Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Minchung Kang, Byungjo Lee, Wonhee Jang, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2019;[Epub]     CrossRef
  • Oceaniradius stylonematis gen. nov., sp. nov., isolated from a red alga, Stylonema cornu-cervi
    Sang Eun Jeong, Kyung Hyun Kim, Duckhyun Lhee, Hwan Su Yoon, Zhe-Xue Quan, En-Young Lee, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2019; 69(7): 1967.     CrossRef
  • Pradoshia eiseniae gen. nov., sp. nov., a spore-forming member of the family Bacillaceae capable of assimilating 3-nitropropionic acid, isolated from the anterior gut of the earthworm Eisenia fetida
    Tilak Saha, Vivek K. Ranjan, Sriradha Ganguli, Subarna Thakur, Biswanath Chakraborty, Partha Barman, Wriddhiman Ghosh, Ranadhir Chakraborty
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(5): 1265.     CrossRef
  • Rhizobium chutanense sp. nov., isolated from root nodules of Phaseolus vulgaris in China
    Yunyun Huo, Wenjun Tong, Juanjuan Wang, Fang Wang, Wenqing Bai, Entao Wang, Peng Shi, Weimin Chen, Gehong Wei
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(7): 2049.     CrossRef
  • Complete nitrification: insights into the ecophysiology of comammox Nitrospira
    Hanna Koch, Maartje A. H. J. van Kessel, Sebastian Lücker
    Applied Microbiology and Biotechnology.2019; 103(1): 177.     CrossRef
  • Paraburkholderia telluris sp. nov., isolated from subtropical forest soil
    Sen-yang Xiao, Zeng-hong Gao, Zi Yang, Jie-yi Bi, Li-hong Qiu
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(5): 1274.     CrossRef
  • Pseudorhodobacter turbinis sp. nov., isolated from the gut of the Korean turban shell, Turbo cornutus
    Yun-Seok Jeong, Woorim Kang, June-Young Lee, Hojun Sung, Hyun Sik Kim, Jeong-Eun Han, Euon Jung Tak, So-Yeon Lee, Jae-Yun Lee, Pil Soo Kim, Dong-Wook Hyun, Mi-Ja Jung, Jin-Woo Bae
    International Journal of Systematic and Evolutionary Microbiology .2019;[Epub]     CrossRef
  • Isolation and genome analysis of Winogradskyella algicola sp. nov., the dominant bacterial species associated with the green alga Dunaliella tertiolecta
    Jaeho Song, Yeonjung Lim, Hye-Jin Jang, Yochan Joung, Ilnam Kang, Seong-Joo Hong, Choul-Gyun Lee, Jang-Cheon Cho
    Journal of Microbiology.2019; 57(11): 982.     CrossRef
  • Jannaschia marina sp. nov., isolated from the gut of a gastropod, Onchidium reevesii
    Si Chen, Mengyuan He, Qiliang Lai, Ying Xu, Chenjing Shang
    International Journal of Systematic and Evolutionary Microbiology .2019;[Epub]     CrossRef
  • Allopseudarcicella aquatilis gen. nov., sp. nov., isolated from freshwater
    Haneul Kim, Heeyoung Kang, Kiseong Joh
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(11): 3574.     CrossRef
  • Paraburkholderia pallida sp. nov. and Paraburkholderia silviterrae sp. nov., isolated from forest soil
    Sen-yang Xiao, Zeng-hong Gao, Qin-hua Lin, Li-hong Qiu
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(12): 3777.     CrossRef
  • Aquincola rivuli sp. nov., isolated from a freshwater stream
    Shih-Yi Sheu, Tsai-Ying Hsieh, Wen-Ming Chen
    International Journal of Systematic and Evolutionary Microbiology .2019; 69(8): 2226.     CrossRef
  • Flavobacterium amnicola sp. nov., isolated from a sub-tropical stream
    Shih-Yi Sheu, Ya-Ping Guo, Wen-Ming Chen
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(8): 2283.     CrossRef
  • Shimia thalassica sp. nov., and reclassification of Pseudopelagicola gijangensis as Shimia gijangensis comb. nov., and Thalassobius activus as Cognatishimia activa comb. nov.
    David R. Arahal, Alexandra La Mura, Teresa Lucena, Lidia Rodrigo-Torres, Rosa Aznar, María J. Pujalte
    International Journal of Systematic and Evolutionary Microbiology .2019; 69(11): 3405.     CrossRef
  • Clostridium indicum sp. nov., a novel anaerobic bacterium isolated from the sludge of an industrial effluent
    Krishna Gundawar, Sumeeta Kumari, Shikha Sharma, Vishakha Grover, Prabhu B. Patil, Suresh Korpole
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(3): 672.     CrossRef
  • Peribacillus faecalis sp. nov., a moderately halophilic bacterium isolated from the faeces of a cow
    Lingmin Jiang, Won Yong Jung, Zhun Li, Mi-Kyung Lee, Seung-Hwan Park, Se Won Kang, Jung-Sook Lee, Hyunjung Jung, Tai-Young Hur, Hyeun Bum Kim, Jae-Kyung Kim, Ju-Hoon Lee, Ju Huck Lee, Jiyoung Lee
    International Journal of Systematic and Evolutionary Microbiology .2019;[Epub]     CrossRef
  • Mucilaginibacter aquatilis sp. nov., Mucilaginibacter arboris sp. nov., and Mucilaginibacter ginkgonis sp. nov., novel bacteria isolated from freshwater and tree bark
    Heeyoung Kang, Haneul Kim, Seokhyeon Bae, Kiseong Joh
    International Journal of Systematic and Evolutionary Microbiology .2019;[Epub]     CrossRef
  • Devosia naphthalenivorans sp. nov., isolated from East Pacific Ocean sediment
    Yong Chen, Sidong Zhu, Danqiu Lin, Xing Wang, Jifang Yang, Jigang Chen
    International Journal of Systematic and Evolutionary Microbiology .2019; 69(7): 1974.     CrossRef
  • Parashewanella tropica sp. nov., a mesophilic bacterium isolated from a marine sponge from Chuuk lagoon, Federated States of Micronesia, and emended description of the genus Parashewanella
    Teddy Namirimu, Mi-Jeong Park, Sung-Hyun Yang, Young-Gun Zo, Kae Kyoung Kwon
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(10): 3256.     CrossRef
  • Histidinibacterium lentulum gen. nov., sp. nov., a marine bacterium from the culture broth of marine microalga Picochlorum sp. 122
    Guanghua Wang, Shuailiang Xu, Hongfei Su, Biao Chen, Jiayuan Liang, Wen Huang, Yinghui Wang, Kefu Yu
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(2): 578.     CrossRef
  • Apibacter muscae sp. nov., a novel bacterial species isolated from house flies
    Rahel Park, Maria C. Dzialo, Donat Nsabimana, Bart Lievens, Kevin J. Verstrepen
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(11): 3586.     CrossRef
  • Pseudomonas nitrititolerans sp. nov., a nitrite-tolerant denitrifying bacterium isolated from a nitrification/denitrification bioreactor
    Ji-Sen Peng, Ying Liu, Lei Yan, Ting-Ting Hou, Hong-Can Liu, Yu-Guang Zhou, Zhi-Pei Liu
    International Journal of Systematic and Evolutionary Microbiology .2019; 69(8): 2471.     CrossRef
  • Geomonas oryzae gen. nov., sp. nov., Geomonas edaphica sp. nov., Geomonas ferrireducens sp. nov., Geomonas terrae sp. nov., Four Ferric-Reducing Bacteria Isolated From Paddy Soil, and Reclassification of Three Species of the Genus Geobacter as Members of
    Zhenxing Xu, Yoko Masuda, Hideomi Itoh, Natsumi Ushijima, Yutaka Shiratori, Keishi Senoo
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Comparative Genomic and Phylogenomic Analyses Clarify Relationships Within and Between Bacillus cereus and Bacillus thuringiensis: Proposal for the Recognition of Two Bacillus thuringiensis Genomovars
    Inwoo Baek, Kihyun Lee, Michael Goodfellow, Jongsik Chun
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Flavobacterium lotistagni sp. nov. and Flavobacterium celericrescens sp. nov., isolated from freshwater habitats
    Jia-Hong Wu, Ya-Xiu You, Chiu-Chung Young, Soon-Wo Kwon, Wen-Ming Chen
    International Journal of Systematic and Evolutionary Microbiology .2019;[Epub]     CrossRef
  • Proposal of Parashewanella gen. nov. to accommodate Parashewanella curva sp. nov. and Parashewanella spongiae comb. nov. in the Shewanellaceae
    Shuailiang Xu, Kefu Yu, Hongfei Su, Biao Chen, Wen Huang, Jiayuan Liang, Yinghui Wang, Guanghua Wang
    International Journal of Systematic and Evolutionary Microbiology .2019; 69(5): 1259.     CrossRef
  • Sulfitobacter profundi sp. nov., isolated from deep seawater
    Jaeho Song, Hye-Jin Jang, Yochan Joung, Ilnam Kang, Jang-Cheon Cho
    Journal of Microbiology.2019; 57(8): 661.     CrossRef
  • Lujinxingia litoralis gen. nov., sp. nov. and Lujinxingia sediminis sp. nov., two new representatives in the order Bradymonadales
    Ling-Yun Guo, Chang-Ming Li, Shuo Wang, Da-Shuai Mu, Zong-Jun Du
    International Journal of Systematic and Evolutionary Microbiology .2019; 69(9): 2767.     CrossRef
  • Syntrophotalea acetylenivorans sp. nov., a diazotrophic, acetylenotrophic anaerobe isolated from intertidal sediments
    Shaun M. Baesman, John M. Sutton, Janna L. Fierst, Denise M. Akob, Ronald S. Oremland
    International Journal of Systematic and Evolutionary Microbiology.2019;[Epub]     CrossRef
  • Adaptations of Alteromonas sp. 76-1 to Polysaccharide Degradation: A CAZyme Plasmid for Ulvan Degradation and Two Alginolytic Systems
    Hanna Koch, Heike M. Freese, Richard L. Hahnke, Meinhard Simon, Matthias Wietz
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Sulfurovum indicum sp. nov., a novel hydrogen- and sulfur-oxidizing chemolithoautotroph isolated from a deep-sea hydrothermal plume in the Northwestern Indian Ocean
    Shaobin Xie, Shasha Wang, Dengfeng Li, Zongze Shao, Qiliang Lai, Yejian Wang, Mingcong Wei, Xiqiu Han, Lijing Jiang
    International Journal of Systematic and Evolutionary Microbiology .2019;[Epub]     CrossRef
  • Bacillus safensis subsp. osmophilus subsp. nov., isolated from condensed milk, and description of Bacillus safensis subsp. safensis subsp. nov.
    Ana G. Abril, Jose Luis R. Rama, Lucia Feijoo-Siota, Pilar Calo-Mata, Sergio Salazar, Alvaro Peix, Encarna Velázquez, Tomás G. Villa
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(1): 189.     CrossRef
  • Pseudomethylobacillus aquaticus gen. nov., sp. nov., a new member of the family Methylophilaceae isolated from an artificial reservoir
    Ceshing Sheu, Cheng-Ye Cai, Shih-Yi Sheu, Zhi-Hao Li, Wen-Ming Chen
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(11): 3551.     CrossRef
  • Metabolic Overlap in Environmentally Diverse Microbial Communities
    Eric R. Hester, Mike S. M. Jetten, Cornelia U. Welte, Sebastian Lücker
    Frontiers in Genetics.2019;[Epub]     CrossRef
  • Application of the Whole Genome-Based Bacterial Identification System, TrueBac ID, Using Clinical Isolates That Were Not Identified With Three Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry (MALDI-TOF MS) Systems
    Sung-Min Ha, Chang Ki Kim, Juhye Roh, Jung-Hyun Byun, Seung-Jo Yang, Seon-Bin Choi, Jongsik Chun, Dongeun Yong
    Annals of Laboratory Medicine.2019; 39(6): 530.     CrossRef
  • Phylogenetic, genomic, and biogeographic characterization of a novel and ubiquitous marine invertebrate-associated Rickettsiales parasite, Candidatus Aquarickettsia rohweri, gen. nov., sp. nov
    J Grace Klinges, Stephanie M Rosales, Ryan McMinds, Elizabeth C Shaver, Andrew A Shantz, Esther C Peters, Michael Eitel, Gert Wörheide, Koty H Sharp, Deron E Burkepile, Brian R Silliman, Rebecca L Vega Thurber
    The ISME Journal.2019; 13(12): 2938.     CrossRef
  • Mucilaginibacter limnophilus sp. nov., isolated from a lake
    Shih-Yi Sheu, Yi-Ru Xie, Wen-Ming Chen
    Journal of Microbiology.2019; 57(11): 967.     CrossRef
  • Diversity of Bacteria Exhibiting Bile Acid-inducible 7α-dehydroxylation Genes in the Human Gut
    Marius Vital, Tatjana Rud, Silke Rath, Dietmar H. Pieper, Dirk Schlüter
    Computational and Structural Biotechnology Journal.2019; 17: 1016.     CrossRef
  • Paraburkholderia dinghuensis sp. nov., isolated from soil
    Jia-cheng Fu, Ying-ying Lv, Jia You, Zeng-hong Gao, Bo-feng Wang, Li-hong Qiu
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(6): 1613.     CrossRef
  • Nocardioides zhouii sp. nov., isolated from the Hailuogou Glacier in China
    Guo-Qing Zhang, Qing Liu, Hong-Can Liu, Yu-Guang Zhou, Yu-Hua Xin
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(8): 2329.     CrossRef
  • Mucilaginibacter gilvus sp. nov., isolated from Antarctic soil
    Yu-Qi Yan, Yong-Xin Hao, Rui-Han He, Zong-Jun Du
    International Journal of Systematic and Evolutionary Microbiology .2019; 69(12): 3885.     CrossRef
  • Paracoccus amoyensis sp. nov., isolated from the surface seawater along the coast of Xiamen Island, China
    Lina Lyu, Qiliang Lai, Jianyang Li, Zhiqiang Yu, Zongze Shao
    International Journal of Systematic and Evolutionary Microbiology .2019;[Epub]     CrossRef
  • Neptunomonas marina sp. nov., isolated from seawater
    Wen-Ming Chen, Tsai-Ying Hsieh, Shih-Yi Sheu
    Archives of Microbiology.2019; 201(8): 1053.     CrossRef
  • Acerihabitans arboris gen. nov., sp. nov., a new member of the family Pectobacteriaceae isolated from sap drawn from Acer pictum
    Soon Dong Lee, In Seop Kim, Hanna Choe, Ji-Sun Kim
    International Journal of Systematic and Evolutionary Microbiology .2019;[Epub]     CrossRef
  • Chakrabartia godavariana gen. nov., sp. nov., a novel member of the family Sphingomonadaceae isolated from the Godavari River, India
    Kunal Jani, Guang-Da Feng, Hong-Hui Zhu, Om Prakash, Jayashree Bandal, Vinay Rale, Yogesh Shouche, Avinash Sharma
    International Journal of Systematic and Evolutionary Microbiology .2019; 69(8): 2452.     CrossRef
  • Hungateiclostridium mesophilum sp. nov., a mesophilic, cellulolytic and spore-forming bacterium isolated from a biogas fermenter fed with maize silage
    Regina Rettenmaier, Martin Gerbaulet, Wolfgang Liebl, Vladimir V. Zverlov
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(11): 3567.     CrossRef
  • Sphingobium terrigena sp. nov., isolated from gasoline-contaminated soil
    Yu Jin Park, Kyung Hyun Kim, Dong Min Han, Dong Ho Lee, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2019; 69(8): 2459.     CrossRef
  • Trinickia dinghuensis sp. nov. and Trinickia fusca sp. nov., isolated from forest soil
    Zeng-hong Gao, Shu-fen Zhong, Yi-ning Qin, Zi Yang, Ying-ying Lv, Li-hong Qiu
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(5): 1390.     CrossRef
  • Roseithermus sacchariphilus gen. nov., sp. nov. and proposal of Salisaetaceae fam. nov., representing new family in the order Rhodothermales
    Mi-Jeong Park, Ji Hye Oh, Sung-Hyun Yang, Kae Kyoung Kwon
    International Journal of Systematic and Evolutionary Microbiology .2019; 69(4): 1213.     CrossRef
  • Cryobacterium melibiosiphilum sp. nov., a psychrophilic bacterium isolated from glacier ice
    Qing Liu, Ji-Hui Tian, Hong-Can Liu, Yu-Guang Zhou, Yu-Hua Xin
    International Journal of Systematic and Evolutionary Microbiology .2019; 69(10): 3276.     CrossRef
  • Flavobacterium stagni sp. nov., isolated from a freshwater reservoir
    Wen-Ming Chen, Ya-Ping Guo, Soon-Wo Kwon, Ceshing Sheu, Shih-Yi Sheu
    International Journal of Systematic and Evolutionary Microbiology .2019; 69(8): 2372.     CrossRef
  • Dyella amyloliquefaciens sp. nov., isolated from forest soil
    Jia-cheng Fu, Zeng-hong Gao, Ting-ting Wu, Mei-hong Chen, Li-hong Qiu
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(11): 3560.     CrossRef
  • Stenotrophobium rhamnosiphilum gen. nov., sp. nov., isolated from a glacier, proposal of Steroidobacteraceae fam. nov. in Nevskiales and emended description of the family Nevskiaceae
    Qing Liu, Hong-Can Liu, Yu-Guang Zhou, Yu-Hua Xin
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(5): 1404.     CrossRef
  • Metagenomic recovery of two distinct comammox Nitrospira from the terrestrial subsurface
    Lianna Poghosyan, Hanna Koch, Adi Lavy, Jeroen Frank, Maartje A.H.J. van Kessel, Mike S.M. Jetten, Jillian F. Banfield, Sebastian Lücker
    Environmental Microbiology.2019; 21(10): 3627.     CrossRef
  • Flavivirga rizhaonensis sp. nov., a marine bacterium isolated from intertidal sand
    Ang Liu, Hong-Mei Liu, Feng Du, Shuang Wang, Long-Yu Zhao, Hong-Hua Zhang, Yun-Qing Li, Qing-Jie Xue, Xiu-Zhen Li
    Antonie van Leeuwenhoek.2019; 112(11): 1645.     CrossRef
  • Paraburkholderia acidiphila sp. nov., Paraburkholderia acidisoli sp. nov. and Burkholderia guangdongensis sp. nov., isolated from forest soil, and reclassification of Burkholderia ultramafica as Paraburkholderia ultramafica comb. nov.
    Zeng-hong Gao, Qiu-mei Zhang, Ying-ying Lv, You-qi Wang, Bing-nan Zhao, Li-hong Qiu
    International Journal of Systematic and Evolutionary Microbiology .2019;[Epub]     CrossRef
  • Faecalibacillus intestinalis gen. nov., sp. nov. and Faecalibacillus faecis sp. nov., isolated from human faeces
    Boram Seo, Kyungchan Jeon, Inwoo Baek, Yung Mi Lee, Kiwoon Baek, GwangPyo Ko
    International Journal of Systematic and Evolutionary Microbiology .2019; 69(7): 2120.     CrossRef
  • Hwanghaeella grinnelliae gen. nov., sp. nov., isolated from a marine red alga
    Jungeun Kim, Sang Eun Jeong, Shehzad Abid Khan, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2019; 69(11): 3544.     CrossRef
  • Comparative Pangenomics of the Mammalian Gut Commensal Bifidobacterium longum
    Korin Albert, Asha Rani, David A. Sela
    Microorganisms.2019; 8(1): 7.     CrossRef
  • Ferruginivarius sediminum gen. nov., sp. nov., isolated from a marine solar saltern
    Shuo Wang, Zi-Hui Ye, Nan-Nan Wang, Da-Shuai Mu, Zong-Jun Du
    International Journal of Systematic and Evolutionary Microbiology .2019; 69(10): 3056.     CrossRef
  • Methylobacterium oryzihabitans sp. nov., isolated from water sampled from a rice paddy field
    Wen-Ming Chen, Cheng-Ye Cai, Zhi-Hao Li, Chiu-Chung Young, Shih-Yi Sheu
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(12): 3843.     CrossRef
  • Genome-based reclassification of Weissella jogaejeotgali as a later heterotypic synonym of Weissella thailandensis
    Min-Jung Kwak, Seon-Bin Choi, Byung-Yong Kim, Jongsik Chun
    International Journal of Systematic and Evolutionary Microbiology .2019; 69(12): 3672.     CrossRef
  • Lysobacter penaei sp. nov., isolated from intestinal content of a Pacific white shrimp (Penaeus vannamei)
    Shuaishuai Xu, Anzhang Li, Ming-Xia Zhang, Qing Yao, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2019;[Epub]     CrossRef
  • Taxogenomics Resolves Conflict in the Genus Rhodobacter: A Two and Half Decades Pending Thought to Reclassify the Genus Rhodobacter
    G. Suresh, Tushar D. Lodha, B. Indu, Ch. Sasikala, Ch. V. Ramana
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Flavobacterium sufflavum sp. nov., isolated from a freshwater lake
    Wen-Ming Chen, Yi-Ru Xie, Soon-Wo Kwon, Shih-Yi Sheu
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(6): 1705.     CrossRef
  • Oceaniglobus ichthyenteri sp. nov., isolated from the gut microflora of sea bass (Dicentrarchus labrax L.) and emended description of the genus Oceaniglobus
    Nan-Nan Wang, Liu-Yan Zhou, Xin-Peng Wang, Ying-Xiu Li, Zong-Jun Du
    International Journal of Systematic and Evolutionary Microbiology .2019; 69(9): 2892.     CrossRef
  • Ruegeria denitrificans sp. nov., a marine bacterium in the family Rhodobacteraceae with the potential ability for cyanophycin synthesis
    David R. Arahal, Teresa Lucena, Lidia Rodrigo-Torres, María J. Pujalte
    International Journal of Systematic and Evolutionary Microbiology.2018; 68(8): 2515.     CrossRef
  • Lawsonibacter asaccharolyticus gen. nov., sp. nov., a butyrate-producing bacterium isolated from human faeces
    Mitsuo Sakamoto, Takao Iino, Masahiro Yuki, Moriya Ohkuma
    International Journal of Systematic and Evolutionary Microbiology.2018; 68(6): 2074.     CrossRef
  • Defining the Species Micromonospora saelicesensis and Micromonospora noduli Under the Framework of Genomics
    Raúl Riesco, Lorena Carro, Brenda Román-Ponce, Carlos Prieto, Jochen Blom, Hans-Peter Klenk, Philippe Normand, Martha E. Trujillo
    Frontiers in Microbiology.2018;[Epub]     CrossRef
  • Phenotypic and Genomic Properties of Brachybacterium vulturis sp. nov. and Brachybacterium avium sp. nov.
    Euon J. Tak, Pil S. Kim, Dong-Wook Hyun, Hyun S. Kim, June-Young Lee, Woorim Kang, Hojun Sung, Na-Ri Shin, Min-Soo Kim, Tae W. Whon, Jin-Woo Bae
    Frontiers in Microbiology.2018;[Epub]     CrossRef
  • Phylogeny Trumps Chemotaxonomy: A Case Study Involving Turicella otitidis
    Inwoo Baek, Mincheol Kim, Imchang Lee, Seong-In Na, Michael Goodfellow, Jongsik Chun
    Frontiers in Microbiology.2018;[Epub]     CrossRef
  • A Phylogenomic and Molecular Markers Based Analysis of the Class Acidimicrobiia
    Danyu Hu, Guihong Cha, Beile Gao
    Frontiers in Microbiology.2018;[Epub]     CrossRef
  • Roseivivax atlanticus (Li, Lai, Liu, Sun and Shao, 2015) is a later heterotypic synonym of Roseivivax marinus (Dai, Shi, Gao, Liu and Zhang, 2014)
    Alexandra La Mura, David R. Arahal, María J. Pujalte
    International Journal of Systematic and Evolutionary Microbiology.2018; 68(8): 2650.     CrossRef
Reviews
Minireview] Loop-mediated isothermal amplification (LAMP): principle, features, and future prospects
Tsugunori Notomi , Yasuyoshi Mori , Norihiro Tomita , Hidetoshi Kanda
J. Microbiol. 2015;53(1):1-5.   Published online January 4, 2015
DOI: https://doi.org/10.1007/s12275-015-4656-9
  • 3,970 View
  • 4 Download
  • 637 Crossref
AbstractAbstract PDF
Loop-mediated isothermal amplification (LAMP), a newly developed gene amplification method, combines rapidity, simplicity, and high specificity. Several tests have been developed based on this method, and simplicity is maintained throughout all steps, from extraction of nucleic acids to detection of amplification. In the LAMP reaction, samples are amplified at a fixed temperature through a repetition of two types of elongation reactions occurring at the loop regions: self-elongation of templates from the stem loop structure formed at the 3'-terminal and the binding and elongation of new primers to the loop region. The LAMP reaction has a wide range of possible applications, including point-of-care testing, genetic testing in resource-poor settings (such as in developing countries), and rapid testing of food products and environmental samples.

Citations

Citations to this article as recorded by  
  • Sensitive and specific detection of influenza virus A/H3N2: An electrochemical aptasensor modified with AuNPs-PEI-MWCNTs
    Amir Hossein Esfandiari, Zahra Mobarezi, Fatemeh Fotouhi, Behnaz Hatamluyi, Zahra Meshkat, Aida Gholoobi
    Talanta.2026; 298: 128971.     CrossRef
  • Rapid detection of Helicobacter pylori and its virulence genes by fluorescence-chromogenic double-indicator LAMP (FC-LAMP)
    Yanghe Liu, Sijie Yin, Shiyue Chen, Chunlei Zhang, Nasifu Lubanga, Ping Tai, Mengqiu Xiong, Boyue Fan, Xincheng Yang, Xinyi Xia, Panfei Hou, Bangshun He
    Clinica Chimica Acta.2026; 580: 120667.     CrossRef
  • On site discrimination between two closely related commercial strains of oyster mushroom using a loop-mediated isothermal amplification (LAMP) test
    Johan Baars, Viola Kurm, Bart Scholten, Yvonne Griekspoor, Brian Lavrijssen, Jurre A. Steens, Marinus J. M. Smulders, Arend van Peer
    Molecular Biology Reports.2026;[Epub]     CrossRef
  • Point-of-Care Diagnostics Using Self-heating Elements from Smart Food Packaging: Moving Towards Instrument-Free Nucleic Acid-Based Detection
    Mojdeh Hamidizadeh, Renata F. Martins, Frank F. Bier
    Molecular Diagnosis & Therapy.2025; 29(1): 67.     CrossRef
  • Enhancing the forensic sexual assault investigations with LAMP-based male DNA detection
    Sunita Chunkul, Tikumphorn Sathirapatya, Piyawan Dangklao, Praphat Kawicha, Rachaneekorn Tammachote, Kornkiat Vongpaisarnsin
    Forensic Science International: Synergy.2025; 10: 100567.     CrossRef
  • Recent developments in isothermal amplification technology for rapid detection of SARS-CoV-2
    Linlin Wang, Ruitong Tang, Wentao Wang, Lingguang Bu, Jingle Sun, Yurong Fu, Meng Li, Zhengjun Yi
    Analytical Methods.2025; 17(4): 652.     CrossRef
  • Rapid detection of the invasive tomato leaf miner, Phthorimaea absoluta using simple template LAMP assay
    Arindam Kumar, Damini Diksha, Susheel Kumar Sharma, P. R. Shashank, D. Nandhini, Soham Ray, Nitika Gupta, Mukesh Kumar Dhillon
    Scientific Reports.2025;[Epub]     CrossRef
  • Both aerosol and primer dimer breakdown for straightforward genotyping based on an integrated immunochromatographic biosensor
    Xiaonan Liu, Jiaxing Zhang, Kai Hua, Yali Cui
    Talanta.2025; 285: 127300.     CrossRef
  • Innovative approaches to food traceability with DNA barcoding: Beyond traditional labels and certifications
    Jacob Tizhe Liberty, Haijiao Lin, Christopher Kucha, Shangpeng Sun, Fatemah B. Alsalman
    Ecological Genetics and Genomics.2025; 34: 100317.     CrossRef
  • Cleavable energy transfer labeled oligonucleotide probe for enhanced isothermal amplification detection and nano digital chip-based readout
    Li Liu, Stephen J. Dollery, Gregory J. Tobin, Guoyu Lu, Ke Du
    Nanoscale.2025; 17(3): 1381.     CrossRef
  • Branch canker battles: understanding and managing the Botryosphaeriaceae in avocado
    Heike Möller, Bernard Slippers, Noëlani van den Berg
    Phytoparasitica.2025;[Epub]     CrossRef
  • Integrated overview on status, diagnosis and disease management of Acute Hepatopancreatic Necrosis Disease (AHPND) in shrimp aquaculture through metallic nanoparticles (MNPs) application – A review
    Mohamad Sofi Abu Hassan, Nurul Ashikin Elias, Marina Hassan, Nurfarah Aini Mocktar, Noor Aniza Harun
    Aquaculture.2025; 595: 741649.     CrossRef
  • From crisis to innovation in point-of-care testing: Lessons from the COVID-19 pandemic and future directions
    Xueting Lu, Jinpei Du, Minli You, Liben Chen, Feng Xu, Fenghao Chen
    TrAC Trends in Analytical Chemistry.2025; 184: 118131.     CrossRef
  • Application of Loop-Mediated Isothermal Amplification in Plant Pathogen Detection
    Liuliu Yang, Yu Sun, Lin Sun, Zehao Wang, Jie Feng, Yue Liang
    Phytopathology®.2025; 115(1): 6.     CrossRef
  • Development of colorimetric and fluorescent closed tube LAMP assay using simplified extraction for diagnosis of Meloidogyne enterolobii in root tissues
    Arunee Suwanngam, Philipp H. Schiffer, Anongnuch Sasnarukkit, Suradej Siripattanapipong, Kansiree Jindapunnapat, Buncha Chinnasri, Toon Ruang-areerate
    Scientific Reports.2025;[Epub]     CrossRef
  • Development of a closed tube loop-mediated isothermal amplification (LAMP) assay to detect Hirschmanniella oryzae (Tylenchida: Pratylenchidae) in exported aquatic plants
    Arunee Suwanngam, Philipp H. Schiffer, Anongnuch Sasnarukkit, Suradej Siripattanapipong, Kansiree Jindapunnapat, Toon Ruang-areerate, Buncha Chinnasri
    Crop Protection.2025; 187: 106989.     CrossRef
  • Machine learning in point-of-care testing: innovations, challenges, and opportunities
    Gyeo-Re Han, Artem Goncharov, Merve Eryilmaz, Shun Ye, Barath Palanisamy, Rajesh Ghosh, Fabio Lisi, Elliott Rogers, David Guzman, Defne Yigci, Savas Tasoglu, Dino Di Carlo, Keisuke Goda, Rachel A. McKendry, Aydogan Ozcan
    Nature Communications.2025;[Epub]     CrossRef
  • An integrated and self-regulating microfluidic device for real-time multiplex detection of Escherichia coli O157:H7 and Salmonella enterica sp.
    Gayathri Sureshkumar, Van Dan Nguyen, Hiep Van Nguyen, Thi Thuy Huong Nguyen, Tae Seok Seo
    Sensors and Actuators B: Chemical.2025; 437: 137758.     CrossRef
  • Construction and application of the RPA-LFD rapid detection method for Glugea plecoglossi
    Jiaxue Song, Ruixin Feng, Yunfei Pang, Qingyue Xu, Dong Zheng, Yunji Xiu, Shun Zhou
    Journal of Oceanology and Limnology.2025; 43(5): 1647.     CrossRef
  • Rapid identification of Lonicera japonica via Proofman-LMTIA technology
    Xiaodong Zhang, Caixia Li, Dejia Lan, Jinxin Liu, Deguo Wang
    Scientific Reports.2025;[Epub]     CrossRef
  • A steam-mediated isothermal amplification and flocculation-based detection platform for electricity-free point of care diagnostics
    Kissan D. Achary, Satheesh Natarajan, Aashish Priye
    The Analyst.2025; 150(6): 1187.     CrossRef
  • Establishment and application of a loop-mediated isothermal amplification method based on MetAP2 gene for the detection of Nosema bombycis in silkworms (Bombyx mori)
    Izhar Hyder Qazi, Ting Yuan, Sijia Yang, Christiana Angel, Jiping Liu
    Frontiers in Veterinary Science.2025;[Epub]     CrossRef
  • Toward the elimination of HAT in Nigeria: leaving no community behind
    Rolayo T. Emmanuel, Kelly Zongo, Olaleye O. Olusola
    International Journal of Infectious Diseases.2025; 152: 107808.     CrossRef
  • Prevention and control of schistosomiasis in the Philippines from a health education perspective
    Xiaodong Yao, Yihan Chen, Keda Chen, Lijun Lin, Jiangyue Zhong, Chaojun Shan, Mingcheng Liu, Xintong Chen, Yijie Zhang, Hongyu Li
    Frontiers in Public Health.2025;[Epub]     CrossRef
  • Molecular Approaches for Authentication and Identification of Medicinal Plants
    Jitender Kumar, Kajal Choudhary, Shelja, Anukriti, Harsharan Singh, Ashwani Kumar, Pankaj Bagga
    Plant Molecular Biology Reporter.2025; 43(3): 1006.     CrossRef
  • Real-time amplification and high resolution melt analysis on a rapid microfluidic instrument
    Renna L. Nouwairi, Killian C. O'Connell, Rachelle A. Turiello, Larissa L. Cunha, Leah M. Gunnoe, Allison C. Burton, Ryan M. Gibiser, Margaret E. Straub, James P. Landers
    Analytica Chimica Acta.2025; 1356: 344046.     CrossRef
  • Use of colorimetry in a new LAMP test for the visual detection of Chlamydia abortus in domestic ruminants
    Carlos-Eduardo Aragón-Lopez, Pablo Luna-Nevárez, Erika-Gabriela Palomarez-Reséndiz, Mario Rojas-Arzaluz, Miguel-Ángel Sánchez-Castro, José-Clemente Leyva-Corona, Marcela-Ivone Morales-Pablos
    Revista Colombiana de Ciencias Pecuarias.2025;[Epub]     CrossRef
  • DNA Extraction‐Free Loop‐Mediated Isothermal Amplification for Rapid and Sensitive Detection of Pratylenchus zeae
    Larissa Cavalcante Almeida, Mauricio Rossato, Thaís Ribeiro Santiago
    Plant Pathology.2025; 74(5): 1407.     CrossRef
  • Concentration-Bias-Free Discrimination of Single Nucleotide Variants Using Isothermal Nucleic Acid Amplification and Mismatch-Guided DNA Assembly
    Yun Tan, Dan Huang, Guan A. Wang, Chenlan Shen, Hui Deng, Feng Li
    Analytical Chemistry.2025; 97(3): 1917.     CrossRef
  • Advances in rapid detection methods for African swine fever virus
    Xinyu GU, Xiyao YIN, Luelue HUANG, Mubashir HUSSAIN, Wei JI, Lijun ZHANG, Yongjun TANG
    Chinese Journal of Analytical Chemistry.2025; 53(4): 100479.     CrossRef
  • Development of a colorimetric loop-mediated isothermal amplification assay for Helicobacter pylori detection
    Chonticha Romyasamit, Apichat Kaewdech, Pimsiri Sripongpun, Naichaya Chamroonkul, Maseetoh Samaeng, Dechawat Wongprot, Phanvasri Saengsuwan, Morteza Saki, Phoomjai Sornsenee
    European Journal of Clinical Microbiology & Infectious Diseases.2025; 44(8): 1935.     CrossRef
  • The Recent Development in the Diagnosis of Mycobacterium tuberculosis
    Nimet Temur, Esma Eryilmaz‐ Eren, Ilhami Celik, Ilknur E. Yıldız, Mustafa Nisari, Ilay S. Unal, Cagla Celik, Nilay Ildiz, Ismail Ocsoy
    Smart Medicine.2025;[Epub]     CrossRef
  • Species-specific RNA barcoding technology for rapid and accurate identification of four types of influenza virus
    Shuai Jiang, Yunyun Ding, Gaili Zhao, Shunxing Ye, Shucan Liu, Yan Yin, Zeqi Li, Xiaoxiao Zou, Daolong Xie, Changqiao You, Xinhong Guo
    BMC Genomics.2025;[Epub]     CrossRef
  • Hydrogel-based electrochemical LAMP sensor for rapid, contamination-free and ultrasensitive point-of-care detection of Vibrio parahaemolyticus
    Jing Zhang, Tengyu Li, Ping Zhou, Lihang Zhu, Xingyu Lin, Bin Su
    Chemical Communications.2025; 61(42): 7660.     CrossRef
  • Development of a visual loop-mediated isothermal amplification method to detect environmental DNA of the giant water bug Kirkaldyia deyrolli in the field
    Jun-ichi Takahashi, Shin-ya Ohba
    Conservation Genetics Resources.2025; 17(2): 121.     CrossRef
  • Recent advances in treatment and detection of Rift Valley fever virus: a comprehensive overview
    Nima Afshar Moghaddam, Zahra Yekanipour, Sama Akbarzadeh, Sahar Molavi Nia, Fatemeh Abarghooi Kahaki, Mohammad Hassan Kalantar, Omid Gholizadeh
    Virus Genes.2025; 61(4): 400.     CrossRef
  • Bringing the heat: Thermostable analogs of Bst polymerase allow high‐temperature LAMP
    Rita Silva Ramos Madureira Simões, João Paulo Soeiro Terra Teodoro, Pedro Miguel Bule Gomes, Carlos Mendes Godinho de Andrade Fontes
    European Journal of Clinical Investigation.2025;[Epub]     CrossRef
  • Target-induced recycling and self-folding hairpin primer-mediated LAMP activation of CRISPR/Cas12a for highly sensitive aptamer-based therapeutic antibody assay
    Kai Shi, Junyi Zhang, Ruo Yuan, Yun Xiang
    The Analyst.2025; 150(15): 3475.     CrossRef
  • Point-of-Care Diagnostic Testing for Emerging and Existing Poultry Viral Respiratory Pathogens Using Loop-Mediated Isothermal Amplification
    Ben Enyetornye, Aurelle Yondo, Binu T. Velayudhan
    Pathogens.2025; 14(7): 657.     CrossRef
  • Enhancing Clinical Detection Accuracy of Large Structured Viral RNA via DNAzyme Cleavage and Antisense‐Assisted Rolling Circle Amplification
    Amal Mathai, Jimmy Gu, Connor Nurmi, John D. Brennan, Yingfu Li
    Angewandte Chemie.2025;[Epub]     CrossRef
  • CRISPR-Cas13a as a next-generation tool for rapid and precise plant RNA virus diagnostics
    Marzieh Karimi, Abozar Ghorbani, Ali Niazi, Mahsa Rostami, Ahmad Tahmasebi
    Plant Methods.2025;[Epub]     CrossRef
  • Mpox: An emerging or re-emerging infection with a potential colossal burden on healthcare globally
    Chikwelu L. Obi, Nqobile M. Mkolo, Liziwe L. Mugivhisa, Modupe O. Ogunrombi, Mukhethwa M. Mphephu, Clarissa M. Naidoo
    African Journal of Laboratory Medicine.2025;[Epub]     CrossRef
  • Colorimetric RT-LAMP for SARS-CoV-2 detection from nasopharyngeal swabs or crude saliva: a multicountry diagnostic accuracy study in Africa
    Urša Šušnjar, Molalegne Bitew, Samuele Ayele, Tina Uršič, Miroslav Petrovec, Tea Carletti, Erica Bussani, Laura De Conti, Feleke Mekonnen, Marycelin Mandu Baba, Eric Lelo Agola, Maria Madalena Chimpolo, Joaquim Carlos Vicente Van-Dúnem, Zékiba Tarnagda, S
    The Lancet Global Health.2025; 13(7): e1258.     CrossRef
  • A comprehensive guide to loop-mediated isothermal amplification, an emerging diagnostic tool for plant pathogenic fungi
    Márk Z. Németh, Gábor M. Kovács
    Frontiers in Plant Science.2025;[Epub]     CrossRef
  • Optimizing CRISPR-Cas12-based detection methods for drug-resistant Plasmodium falciparum with an advanced gene visualization pipeline
    Arli Aditya Parikesit1, Rio Hermantara, Elizabeth Sidhartha, Daniel Ryan Fugaha, Devita Mayanda Heerlie, Solmaz Aslanzadeh
    Journal of Research in Pharmacy.2025; 29(3): 1078.     CrossRef
  • Comprehensive review on emerging nanotechnologies for combating COVID-19 and future pandemic preparedness
    ZuanLei Liang, Guangcun Shan, Shizhe Shan, Zejian Ding, Jiliang Zhang, Bingfeng Chu
    International Journal of Pharmaceutics.2025; 682: 125970.     CrossRef
  • Prediction of vaginal birth after induction of labor with maternal circulating RNA transcripts
    Wenjing Ding, Stephen Siu Chung Chim, Karen Ka Wing Wong, Elaine Yee Ling Ko, Claire Yik Lok Chung, Joyce Ka Yu Tse, Ting Fung Chan, Chi Chiu Wang, Tak Yeung Leung
    American Journal of Obstetrics and Gynecology.2025; 233(5): 490.e1.     CrossRef
  • Molecular point-of-care testing technologies: Current status and challenges
    Yanbing Zu, Hong Chang, Zhanfeng Cui
    Nexus.2025; 2(2): 100059.     CrossRef
  • Development and Application of DNA-Based Tools to Authenticate Marketed Salvia officinalis Products
    Teresa Maria Rosaria Regina, Elisa Calabrese
    Sci.2025; 7(2): 70.     CrossRef
  • Enhancing Clinical Detection Accuracy of Large Structured Viral RNA via DNAzyme Cleavage and Antisense‐Assisted Rolling Circle Amplification
    Amal Mathai, Jimmy Gu, Connor Nurmi, John D. Brennan, Yingfu Li
    Angewandte Chemie International Edition.2025;[Epub]     CrossRef
  • Practical considerations for trace DNA recovery and detection of an invasive reptile across different deposition scenarios
    Nathan Deliveyne, Tiara Kinanti Benyamin, Jeremy J. Austin, Kate Sanders, Phillip Cassey
    Conservation Genetics Resources.2025; 17(4): 189.     CrossRef
  • Yellow canopy syndrome of sugarcane: A review of current knowledge and future research directions
    Hang Xu, Jacob A. Humpal, Bree A. L. Wilson, Gavin J. Ash, Kevin S. Powell
    Annals of Applied Biology.2025;[Epub]     CrossRef
  • Establishment of a visual mixed-dye loop mediated isothermal amplification assay for detecting Plasmodium knowlesi
    Meng Yee Lai, Yee Ling Lau
    Acta Tropica.2025; 269: 107752.     CrossRef
  • Rapid visual detection of tick borne Anaplasma marginale in Indian buffaloes using loop mediated isothermal amplification assay targeting major surface protein 5 gene
    Niranjan Kumar, Jayesh Babulal Solanki, Dharmeshkumar Chandrakantbhai Patel
    Journal of Parasitic Diseases.2025; 49(4): 935.     CrossRef
  • A one-pot and one-step RPA-CRISPR/Cas12b platform applied for streamlined detection of Salmonella spp.
    Jiansen Gong, Linlin Zhuang, Lixia Fu, Huifang Yin, Xinhong Dou, Cuiqin Huang, Xiangan Han
    Journal of Agriculture and Food Research.2025; 23: 102206.     CrossRef
  • Detection of metastatic tumor epithelial cells and their stemness-in lymph nodes of oral squamous cell carcinoma-a RT-LAMP pilot study
    Vandrangi Sameer kumar, M.B. Radhika, Soumya Makarla, Dipti Patil, Joyeeta Mitra, Silpa Madhuri Chikkala, Shruthi Singh, Sravya Reddy Katikela
    Journal of Oral Biology and Craniofacial Research.2025; 15(6): 1238.     CrossRef
  • Tackling Threats from Emerging Fungal Pathogens: Tech-Driven Approaches for Surveillance and Diagnostics
    Farjana Sultana, Mahabuba Mostafa, Humayra Ferdus, Nur Ausraf, Md. Motaher Hossain
    Stresses.2025; 5(3): 56.     CrossRef
  • Nucleic acid amplification tests in digital microfluidics: the promise of next-generation point-of-care diagnostics
    Duc Anh Thai, Yuguang Liu
    Microsystems & Nanoengineering.2025;[Epub]     CrossRef
  • Multiple loop-mediated isothermal amplification assays for the identification of Spodoptera eridania and Spodoptera ornithogalli (Lepidoptera: Noctuidae) based on species-specific genome sequences
    Seung Hyun Lee, Jeong Sun Park, Jee-Young Pyo, Sangmi Lee, Woori Kwak, Deuk-Soo Choi, Iksoo Kim, Brian Rector
    Journal of Economic Entomology.2025; 118(5): 2231.     CrossRef
  • Loop-Mediated Isothermal Amplification (LAMP) Assay for Rapid Detection of Salmonella enterica in Low-Resource Settings
    Umar Muhtar Nasir, Yusuf Ibrahim Musa, Abdulaziz Dantata, Tsoho Nura Rabiu, Ahmad Gumel Mohammed
    UMYU Journal of Microbiology Research (UJMR).2025; 10(3): 97.     CrossRef
  • Evaluation of different DNA extraction methods for the detection of Clostridium perfringens by loop-mediated isothermal amplification (LAMP) assay
    Deepa Chaudhary, Sabin Poudel, Chuan-Yu Hsu, Linan Jia, Anuraj T. Sukumaran, Xue Zhang, Wen-Hsing Cheng, Aaron S. Kiess, Kenneth S. Macklin, Li Zhang
    Journal of Applied Poultry Research.2025; 34(4): 100600.     CrossRef
  • Modular Microfluidics: A Systematic Review of Assembly-Based Categorization and Biological Applications
    Seonghun Mun, Jongwoo Ahn, Geonho Jin, Hong Nam Kim, Seokyoung Bang
    BioChip Journal.2025; 19(3): 456.     CrossRef
  • Electrostatically Adjustable AuNR-Mediated Thermal-Start Isothermal Nucleic Acid Amplification
    Hanhua Li, Jiale Gao, Huiwen Xiong, Dilimulati Yishake, Lin Liu, Jilie Kong, Qin Chen, Xueen Fang, Wenhao Weng
    ACS Omega.2025; 10(36): 41524.     CrossRef
  • Unveiling the invisible threat: cutting-edge methods for detecting fungal and oomycete plant pathogens and mycotoxins
    Rossana Parlascino, Sebastiano Conti Taguali, Mario Riolo, Moricca Salvatore, József Bakonyi, David Ezra, Alessandra Benigno, Federico La Spada, Antonella Pane, Santa Olga Cacciola
    Physiological and Molecular Plant Pathology.2025; 140: 102893.     CrossRef
  • Cotton pest and disease diagnosis via YOLOv11-based deep learning and knowledge graphs: a real-time voice-enabled edge solution
    Meiqi Zhong, Linjing Wei, Henghui Mo
    Frontiers in Plant Science.2025;[Epub]     CrossRef
  • Rapid and simple detection of HCV RNA: enhanced colorimetric RT-LAMP method using unmodified gold nanoparticles
    Hanne Altın, Esra Agel, Ayse Istanbullu Tosun
    BMC Microbiology.2025;[Epub]     CrossRef
  • A probe-corrected loop-mediated isothermal amplification–lateral flow assay platform for highly specific, point-of-care detection of Brucella abortus DNA
    Jeong-Eun Lee, Yong Sun Cho, Hyoyoung Mun, Hyun-Jin Kim, Suk Kim, Won-Bo Shim
    Microchemical Journal.2025; 219: 116153.     CrossRef
  • Loop-mediated isothermal amplification coupled with a nanoparticle-based lateral biosensor for rapid, sensitive, and specific detection of Talaromyces marneffei
    Yuhong Zhou, Rui Ye, Yizhe Wang, Xue Zhao, Honglan Yu, Yu Wang
    Frontiers in Microbiology.2025;[Epub]     CrossRef
  • Recent Advances in Loop-Mediated Isothermal Amplification (LAMP) for On-Site Virus Detection
    Dain Kang, Sohyun Choi, Seokbeom Roh, Taeha Lee, Gyudo Lee
    JOURNAL OF SENSOR SCIENCE AND TECHNOLOGY.2025; 34(5): 432.     CrossRef
  • Visual loop-mediated isothermal amplification (LAMP) assay for specific detection of groundnut ringspot and tomato spotted wilt orthotospoviruses
    Soledad de Breuil, Salvador López, Carolina Dottori, Claudia Nome, Scott Adkins
    Journal of Plant Pathology.2025;[Epub]     CrossRef
  • LAMP using distance based paper device for quantitative detection of ESBL producing Escherichia coli in UTI patients
    Natkrittaya Saengsawang, Panthita Ruang-areerate, Saovanee Leelayoova, Mathirut Mungthin, Piraporn Juntanawiwat, Patomroek Hanyanunt, Patsanun Potisuwan, Worarachanee Imjaijitt, Piyanate Kesakomol, Wijitar Dungchai, Toon Ruang-areerate
    Scientific Reports.2025;[Epub]     CrossRef
  • Measuring the Invisible: Microbial Diagnostics for Periodontitis—A Narrative Review
    Michihiko Usui, Suzuka Miyagi, Rieko Yamanaka, Yuichiro Oka, Kaoru Kobayashi, Tsuyoshi Sato, Kotaro Sano, Satoru Onizuka, Maki Inoue, Wataru Fujii, Masanori Iwasaki, Wataru Ariyoshi, Keisuke Nakashima, Tatsuji Nishihara
    International Journal of Molecular Sciences.2025; 26(20): 10172.     CrossRef
  • Loop-mediated isothermal amplification (LAMP): A promising tool for rapid, point-of-care diagnosis of parasitic diseases in low-income countries
    Kevin Polpitiya, Madhavi Hewadikaram
    Molecular and Biochemical Parasitology.2025; 264: 111704.     CrossRef
  • Environmental and Serological Monitoring of Porcine Circovirus by Loop-Mediated Isothermal Amplification in Pig Farms
    Alexandre Lamas, Alejandro Garrido-Maestu, Gonzalo López-Lorenzo
    Veterinary Sciences.2025; 12(10): 1011.     CrossRef
  • Development of a Novel Loop-Mediated Isothermal Amplification (LAMP) for Rapid Diagnosis of Newcastle Disease in Field and Resource-Limited Areas
    Berihun Dires Mihiretu, Tatsufumi Usui, Tesfaye Rufael Chibssa, Abde Aliy Mohammed, Tsuyoshi Yamaguchi
    Veterinary Medicine: Research and Reports.2025; Volume 16: 39.     CrossRef
  • DNA-Based Technology for Herpesvirus Detection
    Gloria Maini, Giorgia Cianci, Matteo Ferraresi, Valentina Gentili, Daria Bortolotti
    DNA.2024; 4(4): 553.     CrossRef
  • Democratizing nucleic acid-based molecular diagnostic tests for infectious diseases at resource-limited settings – from point of care to extreme point of care
    Suman Chakraborty
    Sensors & Diagnostics.2024; 3(4): 536.     CrossRef
  • Cross comparison of alternative diagnostic protocols including substitution to the clinical sample, RNA extraction method and nucleic acid amplification technology for COVID-19 diagnosis
    Ismael Segura-Ulate, Navilla Apú, Bernal Cortés, Jordi Querol-Audi, Yamitzel Zaldívar, Carlos Alexander Ortega, Fernando Flores-Mora, Andrés Gatica-Arias, Germán Madrigal-Redondo
    Frontiers in Molecular Biosciences.2024;[Epub]     CrossRef
  • Application of extremophile cell factories in industrial biotechnology
    Yuzhou Wang, Jinyi Qian, Tianqiong Shi, Yuetong Wang, Qiang Ding, Chao Ye
    Enzyme and Microbial Technology.2024; 175: 110407.     CrossRef
  • Comparison of dye-based and probe-based RT-LAMP in detection of canine astrovirus
    Haixiao Shen, Dequan Yang, Xin Li, Houbin Ju, Feifei Ge, Xianchao Yang, Jian Wang, Luming Xia, Hongjin Zhao, Ping Jiang
    Archives of Virology.2024;[Epub]     CrossRef
  • Optimization of the molecular detection assay of Salmonella (MDS®) for drag swab samples of aviaries
    MAIARA CRISTINE TITON, DIOGENES DEZEN, PAULO M.A. COSTA, DOUGLAS WILIAN RIZZOTTO, SIDIANE FATIMA CASTANHA, ALESSANDRA F. MILLEZI
    Anais da Academia Brasileira de Ciências.2024;[Epub]     CrossRef
  • AMPLON: Amplifying DNA with Multiarm Priming and Looping Optimization of Nucleic Acid
    Mert Tunca Doganay, Ethan Roman, Andrea M. Hujer, Robert A. Bonomo, Steven G. Deeks, Daniel R. Kuritzkes, Mohamed S. Draz
    Advanced Materials.2024;[Epub]     CrossRef
  • Rapid on-site detection of Leuconostoc citreum in commercially processed products using loop-mediated isothermal amplification(LAMP) technique
    Yoon-Soo Gwak, Hae-Yeong Kim, Mi-Ju Kim
    Food Control.2024; 158: 110230.     CrossRef
  • Ratoon Stunting Disease of Sugarcane: A Review Emphasizing Detection Strategies and Challenges
    Moutoshi Chakraborty, Narshone Soda, Simon Strachan, Chuong N. Ngo, Shamsul A. Bhuiyan, Muhammad J. A. Shiddiky, Rebecca Ford
    Phytopathology®.2024; 114(1): 7.     CrossRef
  • Global resurgence of pertussis: A perspective from China
    Ying Liu, Daojun Yu, Kaixuan Wang, Qing Ye
    Journal of Infection.2024; 89(5): 106289.     CrossRef
  • Sex differences in the growth of sea cucumber (Apostichopus japonicus)
    Jingjing Cong, Lingnan Kong, Weihan Meng, Zengdong Wang, Zhihui Sun, Yaqing Chang
    Aquaculture.2024; 582: 740475.     CrossRef
  • Recent advances in exponential amplification reaction-enabled biosensors
    Wentao Zhao, Fengli Su, Shulin Wang, Yujie Ma, Bingzhi Li, Xing Zhang
    TrAC Trends in Analytical Chemistry.2024; 181: 118006.     CrossRef
  • Rapid ABO genotyping method using loop-mediated isothermal amplification (LAMP) and real-time PCR
    Hokwon Choi, Jiwoo Choi, Kyunghyeon Kwak, Yebin Kim, Eunbyeol Kim, Si-Keun Lim
    International Journal of Legal Medicine.2024; 138(3): 751.     CrossRef
  • A new simplified sequence-dependent loop-mediated isothermal amplification (LAMP) detection method
    Yanju Chen, Yuanyuan Zhu, Jungang Du, Cheng Peng, Xiaofu Wang, Jian Wu, Qingli Zhou, Huan Chen, Junfeng Xu
    Analytical and Bioanalytical Chemistry.2024; 416(18): 4143.     CrossRef
  • Evaluation of molecular inhibitors of loop-mediated isothermal amplification (LAMP)
    May Khat Nwe, Nisachon Jangpromma, Lapatrada Taemaitree
    Scientific Reports.2024;[Epub]     CrossRef
  • Development and validation of a new and rapid molecular diagnostic tool based on RT-LAMP for Hepatitis C virus detection at point-of-care
    Sonia Arca-Lafuente, Cristina Yépez-Notario, Pablo Cea-Callejo, Violeta Lara-Aguilar, Celia Crespo-Bermejo, Luz Martín-Carbonero, Ignacio de los Santos, Verónica Briz, Ricardo Madrid
    Methods.2024; 232: 43.     CrossRef
  • Label-free Colorimetric Detection of Viral RNA Based on Clustered Regularly Interspaced Short Palindromic Repeats and Gold Nanoparticles with a Portable Device
    Yaqin Zhang, Jianai Chen, Fange Kong, Chunxia Wang, Hangyu Guo, Yingchun Li, Jiahui Lu, Jicheng Zhang, Jiasi Wang, Yulin Zhou
    Langmuir.2024; 40(22): 11534.     CrossRef
  • Advancements in DNA analysis for distinguishing wild boar and domestic pig: a mini-review on research developments for food authentication studies
    S D Volkandari, A Rohman, S N A Jenie, M Cahyadi, Y Erwanto
    IOP Conference Series: Earth and Environmental Science.2024; 1377(1): 012025.     CrossRef
  • Developing Loop Mediated Isothermal Amplification (LAMP) assays for rapid, presumptive DNA detection of an invasive reptile (Boa constrictor)
    Nathan Deliveyne, Jeremy J. Austin, Phillip Cassey, Adam Stow
    Wildlife Research.2024;[Epub]     CrossRef
  • Advancements in LAMP-Based Diagnostics: Emerging Techniques and Applications in Viral Detection with a Focus on Herpesviruses in Transplant Patient Management
    Ana Cláudia Martins Braga Gomes Torres, Carolina Mathias, Suelen Cristina Soares Baal, Ana Flávia Kohler, Mylena Lemes Cunha, Lucas Blanes
    International Journal of Molecular Sciences.2024; 25(21): 11506.     CrossRef
  • Development and evaluation of a loop-mediated isothermal amplification (LAMP) method for Candida glabrata detection
    H. Yahaya, Y. K. Cheah, H. Y. Chee, L. T. L. Than
    European Journal of Clinical Microbiology & Infectious Diseases.2024; 43(11): 2211.     CrossRef
  • Advancements in nanobiosensor technologies for in-vitro diagnostics to point of care testing
    Chuntae Kim, Moon Sung Kang, Iruthayapandi Selestin Raja, Yoon Ki Joung, Dong-Wook Han
    Heliyon.2024; 10(22): e40306.     CrossRef
  • Detection of Clarithromycin Resistance in Helicobacter pylori Using MmaxSure™ H. pylori & ClaR Assay
    Ilsoo Kim, Yu Ri Shin, Joon Sung Kim, Byung-Wook Kim, Lee-So Maeng, Jung Min Kim
    Digestive Diseases.2024; 42(4): 292.     CrossRef
  • Single-tube colorimetric loop-mediated isothermal amplification (LAMP) assay for high-sensitivity detection of SLCMV in cassava from southern India
    R. Arutselvan, T. Makeshkumar
    Microbial Pathogenesis.2024; 192: 106718.     CrossRef
  • Food Authentication: The Detection of Arbutus unedo and Olea europaea Leaves as an Admixture of Oregano Using LAMP- and Duplex LAMP-Based Test Systems with Lateral-Flow Assays
    Nathalie Holz, Nils Wax, Boris A. Illarionov, Margarita Iskhakova, Markus Fischer
    Agriculture.2024; 14(4): 597.     CrossRef
  • Development of a highly specific LAMP assay for detection of Sarcocystis tenella and Sarcocystis gigantea in sheep
    Yajie Chen, Jing Peng, Zifu Zhu, Wen Zhang, Lifang Wang, Jianhai Xu, Qun Liu, Jing Liu
    Parasitology Research.2024;[Epub]     CrossRef
  • The Role of Biosensors in Detection of SARS-CoV-2: State-of-the-Art and Future Prospects
    Nimisha Roy, Abhipsha Khadanga, Amar Dhwaj, Amit Prabhakar, Deepti Verma
    Current Nanoscience.2024; 20(5): 599.     CrossRef
  • Recent advances of food safety detection by nucleic acid isothermal amplification integrated with CRISPR/Cas
    Jiali Qiao, Zhiying Zhao, Yaru Li, Minghui Lu, Shuli Man, Shengying Ye, Qiang Zhang, Long Ma
    Critical Reviews in Food Science and Nutrition.2024; 64(32): 12061.     CrossRef
  • Genosensor on-chip paper for point of care detection: A review of biomedical analysis and food safety application
    Lelya Hilda, Maysam Salih Mutlaq, Ibrahem Waleed, Raed H. Althomali, Mohammed H. Mahdi, Sherzod Shukhratovich Abdullaev, Rajesh Singh, Hind Ali Nasser, Yasser Fakri Mustafa, Ahmed H.R. Alawadi
    Talanta.2024; 268: 125274.     CrossRef
  • Self-Priming Cyclic Amplification Accelerating CRISPR Sensor for Sensitive and Specific MicroRNA Analysis with No Background
    Dayong Li, Yanheng Yao, Wenting Cheng, Zhiqiang Hou, Zhongyun Wang, Yang Xiang
    Analytical Chemistry.2024; 96(4): 1717.     CrossRef
  • Combination of nucleic acid amplification and CRISPR/Cas technology in pathogen detection
    Dandan Zeng, Jinlong Jiao, Tianlu Mo
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • A simplified molecular tool for detecting the Chagas etiological agent using a vector feces sample in field conditions
    Luciana Larocca, Fabiana G. Stolowicz, Adrian A. Vojnov, Florencia Cano Suarez, Liliana Salvá, Sergio Meli, Ana Laura Carbajal-de-la-Fuente, Carolina Carrillo
    Journal of Invertebrate Pathology.2024; 206: 108161.     CrossRef
  • Comparison of the Diagnostic Performances of Five Different Tests in Diagnosing Visceral Leishmaniasis in an Endemic Region of Ethiopia
    Dawit Gebreegziabiher Hagos, Yazezew Kebede Kiros, Mahmud Abdulkader, Henk D. F. H. Schallig, Dawit Wolday
    Diagnostics.2024; 14(2): 163.     CrossRef
  • An overview of fasciolosis in Nepal: epidemiology, diagnosis, and control strategies
    Sameer Thakur
    Journal of Parasitic Diseases.2024; 48(4): 723.     CrossRef
  • Progress of exosomes in diagnosis of tuberculosis
    Yuheng Liu, Yao Liao, Ji Wu, ZiFeng Zhu, DingHao Li, Lifu Wang
    Decoding Infection and Transmission.2024; 2: 100020.     CrossRef
  • A Novel High-Throughput Sample-in-Result-Out Device for the Rapid Detection of Viral Nucleic Acids
    Fangning Wang, Fei Hu, Yunyun Zhang, Xichen Li, Qin Ma, Xincheng Wang, Niancai Peng
    Biosensors.2024; 14(11): 549.     CrossRef
  • Latest trends in biosensors powered by nucleic acid isothermal amplification for the diagnosis of joint infections: From sampling to identification towards the point-of-care
    Mariarita De Felice, Mariarosaria De Falco, Amina Antonacci, Sara Colella, Vincenzo Vedi, Rachele Isticato, Alfonso Maria Romano, Valeria Nocerino, Bruno Miranda, Luca De Stefano, Viviana Scognamiglio
    TrAC Trends in Analytical Chemistry.2024; 181: 118036.     CrossRef
  • Probe-Based Loop-Mediated Isothermal Amplification Assay for Rapid Detection of Two Clarireedia spp., the Causal Agent of Dollar Spot of Turfgrass
    Tammy Stackhouse, Anna Bass, Sumyya Waliullah, Emran Ali, Bochra A. Bahri, Alfredo D. Martinez-Espinoza
    Plant Disease.2024; 108(10): 3115.     CrossRef
  • A Foldable Thermoplastic Microdevice Integrating Isothermal Amplification and Schiff-Reaction-Based Colorimetric Assay for the Detection of Infectious Pathogens
    Hee Mang Kim, Nae Yoon Lee
    Chemosensors.2024; 12(5): 75.     CrossRef
  • Paper-based loop-mediated isothermal amplification and CRISPR integrated platform for on-site nucleic acid testing of pathogens
    Anindita Sen, Manaswini Masetty, Sasanka Weerakoon, Calum Morris, Jagjit S. Yadav, Senu Apewokin, Jennifer Trannguyen, Murray Broom, Aashish Priye
    Biosensors and Bioelectronics.2024; 257: 116292.     CrossRef
  • Commercial Opportunity or Addressing Unmet Needs—Loop-Mediated Isothermal Amplification (LAMP) as the Future of Rapid Diagnostic Testing?
    Jelle J. Feddema, Kenneth D. S. Fernald, Bart J. F. Keijser, Jasper Kieboom, Linda H. M. van de Burgwal
    Diagnostics.2024; 14(17): 1845.     CrossRef
  • Advancements in visualizing loop-mediated isothermal amplification (LAMP) reactions: A comprehensive review of colorimetric and fluorometric detection strategies for precise diagnosis of infectious diseases
    Arumugam Selva Sharma, Nae Yoon Lee
    Coordination Chemistry Reviews.2024; 509: 215769.     CrossRef
  • Molecular diagnosis of human toxoplasmosis: the state of the art
    Eman Fathi Fadel, Hanaa Ahmed EL-Hady, Amal Mostafa Ahmed, Mohammed Essa Marghany Tolba
    Journal of Parasitic Diseases.2024; 48(2): 201.     CrossRef
  • An All-in-One Platform for On-Site Multiplex Foodborne Pathogen Detection Based on Channel-Digital Hybrid Microfluidics
    Mei Xie, Tianlan Chen, Zongwei Cai, Bo Lei, Cheng Dong
    Biosensors.2024; 14(1): 50.     CrossRef
  • A microfluidic-based quantitative analysis system for the multiplexed genetic diagnosis of human viral infections using colorimetric loop-mediated isothermal amplification
    Daigo Natsuhara, Akira Miyajima, Tomoya Bussho, Shunya Okamoto, Moeto Nagai, Masaru Ihira, Takayuki Shibata
    The Analyst.2024; 149(12): 3335.     CrossRef
  • Loop‐mediated isothermal amplification (LAMP) assays for Aedes and Culex species and evaluation of a simple DNA preparation method for field application
    Tim Kamber, Alexander Mathis
    Journal of Applied Entomology.2024; 148(7): 746.     CrossRef
  • Rapid Visual Detection of Spiroplasma eriocheiris by Loop-Mediated Isothermal Amplification with Hydroxynaphthol Blue Dye
    Shun Zhou, Zongrui Yang, Baoshan Guo, Jingyuan Yi, Yunfei Pang, Ruixin Feng, Jiaxue Song, Yunji Xiu
    Marine Biotechnology.2024; 26(1): 116.     CrossRef
  • Loop-mediated isothermal amplification (LAMP) for detection of atypical enterovirus D68 strain VR-1197
    Ann-Kristin Tveten, Hanne Lillerovde Ørstenvik, Ingvill Tolaas
    Journal of Virological Methods.2024; 330: 115030.     CrossRef
  • UV-ozone treated glass fiber based lateral flow DNA extraction platform integrated with LAMP for rapid detection of pathogen bacteria in whole blood
    Tugba Tezcan, Merve Calimci, Ismail Hakki Boyaci, Ugur Tamer
    Microchemical Journal.2024; 206: 111487.     CrossRef
  • Digital microfluidics with distance-based detection – a new approach for nucleic acid diagnostics
    Man Ho, N. Sathishkumar, Alexandros A. Sklavounos, Jianxian Sun, Ivy Yang, Kevin P. Nichols, Aaron R. Wheeler
    Lab on a Chip.2024; 24(1): 63.     CrossRef
  • Molecular detection of sub-microscopic infections and Plasmodium falciparum histidine-rich protein-2 and 3 gene deletions in pre-elimination settings of South Africa
    Olukunle O. Oyegoke, Olusegun P. Akoniyon, Leah Maharaj, Taiye S. Adewumi, Samson A. Malgwi, Samuel A. Aderoju, Abiodun J. Fatoba, Matthew A. Adeleke, Rajendra Maharaj, Moses Okpeku
    Scientific Reports.2024;[Epub]     CrossRef
  • REASSURED Test System for Food Control—Preparation of LAMP Reaction Mixtures for In-Field Identification of Plant and Animal Species
    Nathalie Holz, Nils Wax, Marie Oest, Markus Fischer
    Applied Sciences.2024; 14(23): 10946.     CrossRef
  • Human Papillomavirus (HPV16 and HPV18) Infection; Pathogenesis, Vaccination, and Detection by Loop-Mediated Isothermal Amplification with Lateral Flow Dipstick Tests: A Review
    Farzane Kargar, Mohammad Rahmati, Marzieh Jamalidoust, Mojtaba Mortazavi, Amir Savardashtaki, Morteza Milani, Amir Vahedi
    Archives of Pediatric Infectious Diseases.2024;[Epub]     CrossRef
  • A handheld HIV detection platform using paper-based sample preparation and real-time isothermal amplification
    George Adedokun, Gurjit Sidhu, Morteza Alipanah, Gary P. Wang, Z. Hugh Fan
    Microsystems & Nanoengineering.2024;[Epub]     CrossRef
  • Vibration mixing for enhanced paper-based recombinase polymerase amplification
    Kelli N. Shimazu, Andrew T. Bender, Per G. Reinhall, Jonathan D. Posner
    Lab on a Chip.2024; 24(20): 4879.     CrossRef
  • Application of LAMP coupled with NALF for precise detection of mycoplasma pneumoniae
    Qi Yun, Si Fei Ma, Yue Cui, Hao Ying Ge, Qian Yun Zhang, Ning Zhang, Dong Ming Lu, Meng Gu
    Biochemical and Biophysical Research Communications.2024; 717: 150028.     CrossRef
  • Portable biosensor combining CRISPR/Cas12a and loop-mediated isothermal amplification for antibiotic resistance gene ermB in wastewater
    Kang Mao, Hua Zhang, Fang Ran, Haorui Cao, Rida Feng, Wei Du, Xiqing Li, Zhugen Yang
    Journal of Hazardous Materials.2024; 462: 132793.     CrossRef
  • Loop-mediated isothermal amplification assays for the detection of antimicrobial resistance elements in Vibrio cholera
    Daniel Antonio Negrón, Shipra Trivedi, Nicholas Tolli, David Ashford, Gabrielle Melton, Stephanie Guertin, Katharine Jennings, Bryan D. Necciai, Shanmuga Sozhamannan, Bradley W. Abramson
    BMC Bioinformatics.2024;[Epub]     CrossRef
  • Development of a loop-mediated isothermal amplification (LAMP) assay for rapid and visual detection of Anguillid herpesvirus 1
    Qiang Chen, Li-Juan Zhang, Tie-Ying Song, Jun-Qing Ge
    Journal of Virological Methods.2024; 330: 115014.     CrossRef
  • Rapid and sensitive detection of Taura syndrome virus (TSV) in shrimp based on an isothermal enzymatic recombinase amplification (ERA) assay
    Jiaobing Li, Jingjie Hu, Zhenmin Bao, Mengqiang Wang
    Aquaculture International.2024; 32(5): 6211.     CrossRef
  • Portable, and ultrasensitive HR-HPV tests based on nucleic acid biosensors
    Chang Ma, Minhong Zou, Ning Xu, Yan Liu, Yuru Wang
    Frontiers in Cellular and Infection Microbiology.2024;[Epub]     CrossRef
  • Multiplex fluorescence loop-mediated isothermal amplification with lateral flow assay for rapid simultaneous detection of mecA and nuc genes in methicillin-resistant Staphylococcus aureus
    Jeong-Eun Lee, Ji Yoon Chang, Won-Bo Shim
    Analytica Chimica Acta.2024; 1319: 342984.     CrossRef
  • LAMP Reaction in Plant Disease Surveillance: Applications, Challenges, and Future Perspectives
    Chiara Aglietti, Alessandra Benigno, Santa Olga Cacciola, Salvatore Moricca
    Life.2024; 14(12): 1549.     CrossRef
  • Current Trends in RNA Virus Detection via Nucleic Acid Isothermal Amplification-Based Platforms
    Le Thi Nhu Ngoc, Young-Chul Lee
    Biosensors.2024; 14(2): 97.     CrossRef
  • Application of Loop-Mediated Isothermal Amplification Assay Combined with Lateral Flow Dipstick (LAMP-LFD) for Specific and Sensitive Detection of Acidovorax citrulli (Schaad et al.) Causing Bacterial Fruit Blotch in Cucurbit Plants
    Chengzhong Lan, Minsang Luo, Lin Gan, Meiling Hu, Hongchun Ruan, Yuli Dai, Xiaofei Liu, Xiujuan Yang
    Agronomy.2024; 14(8): 1804.     CrossRef
  • Recent advances and challenges in plant viral diagnostics
    Aizada Kanapiya, Ulbike Amanbayeva, Zhanar Tulegenova, Altyngul Abash, Sayan Zhangazin, Kazbek Dyussembayev, Gulzhamal Mukiyanova
    Frontiers in Plant Science.2024;[Epub]     CrossRef
  • Comparison of the diagnostic accuracy of the Pluslife Mini Dock RHAM technology with Abbott ID Now and Cepheid GenXpert: A retrospective evaluation study
    Laura Herrmann, Juliana Breuer, Tuan Ngo Duc, Nicole Thomé, Fatemeh Ghazaani, Sundrela Kamhieh-Milz, Julian Kamhieh-Milz, Andreas Pfützner
    Scientific Reports.2024;[Epub]     CrossRef
  • On-Site Bioaerosol Sampling and Airborne Microorganism Detection Technologies
    Afagh Rastmanesh, Jayanta S. Boruah, Min-Seok Lee, Seungkyung Park
    Biosensors.2024; 14(3): 122.     CrossRef
  • Molecular detection and sequencing of beet necrotic yellow vein virus and beet cryptic virus 2 in sugar beet from Kazakhstan
    Alexandr Pozharskiy, Aruzhan Mendybayeva, Ruslan Moisseyev, Marina Khusnitdinova, Gulnaz Nizamdinova, Dilyara Gritsenko
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • A simple joint detection platform for high-throughput single-cell heterogeneity screening
    Yi Qiao, Qiongdan Zhang, Yukun He, Tianguang Cheng, Jing Tu
    Talanta.2024; 269: 125460.     CrossRef
  • Sensitive and specific CRISPR-Cas12a assisted nanopore with RPA for Monkeypox detection
    Md. Ahasan Ahamed, Muhammad Asad Ullah Khalid, Ming Dong, Anthony J. Politza, Zhikun Zhang, Aneesh Kshirsagar, Tianyi Liu, Weihua Guan
    Biosensors and Bioelectronics.2024; 246: 115866.     CrossRef
  • Development of a rapid detection method for molecular beacons LAMP for Vibrio parahaemolyticus in food safety
    Jiayin Lv, Yuhong Guan
    Materials Express.2024; 14(4): 551.     CrossRef
  • GMOIT: a tool for effective screening of genetically modified crops
    Pu Zhou, Xuan Liu, Jingang Liang, Juanli Zhao, Yuqi Zhang, Dongmei Xu, Xiaying Li, Ziyan Chen, Zongyong Shi, Jianhua Gao
    BMC Plant Biology.2024;[Epub]     CrossRef
  • LAMP Assay to Detect Elsinoë necatrix, an Important Eucalyptus Shoot and Leaf Pathogen
    Alishia van Heerden, Nam Q. Pham, Brenda D. Wingfield, Michael J. Wingfield, Jupiter I. Muro Abad, Alvaro Durán, P. Markus Wilken
    Plant Disease.2024; 108(9): 2731.     CrossRef
  • Rapid and specific detection of mackerels of the genus Scomber using loop-mediated isothermal amplification (LAMP)
    Wei Cui, Hiroki Koyama, Kouichi Kurose
    Fisheries Science.2024; 90(6): 1025.     CrossRef
  • Chemical Heating for Minimally Instrumented Point-of-Care (POC) Molecular Diagnostics
    Michael G. Mauk, Felix Ansah, Mohamed El-Tholoth
    Biosensors.2024; 14(11): 554.     CrossRef
  • Development of a Rapid Detection Method to Prorocentrum lima by Loop-Mediated Isothermal Amplification with Hydroxy Naphthol Blue
    Chao Yang, Yu Zhen, Jialin Hou, Tiezhu Mi
    Marine Biotechnology.2024; 26(3): 475.     CrossRef
  • Development of a multiplex one-tube loop-mediated isothermal amplification method for rapidly simultaneous detection of the mecA and nuc genes in methicillin-resistant Staphylococcus aureus
    Jeong-Eun Lee, Sol-A Kim, Hyoyoung Mun, Kwang-Soo Ha, Won-Bo Shim
    Microchemical Journal.2024; 201: 110712.     CrossRef
  • The Present and Future Landscapes of Molecular Diagnostics
    Justin C. Rolando, Arek V. Melkonian, David R. Walt
    Annual Review of Analytical Chemistry .2024; 17(1): 459.     CrossRef
  • Characterization, Molecular Mechanism of Prochloraz-Resistance in Fusarium fujikuroi and Development of Loop-Mediated Isothermal Amplification Rapid Detection Technique Based on the S312T Genotype of Resistances
    Chenyang Ge, Daixing Dong, Chengxing Mao, Qianqian Zhang, Chuanqing Zhang
    Journal of Fungi.2024; 10(8): 560.     CrossRef
  • Culicoides Species of the Rain Forest Belt of the Littoral Region of Cameroon: Their Incrimination in the Transmission of Mansonella perstans
    Rene Ebai, Chi Anizette Kien, Fanny Fri Fombad, Frederick Esofi, Emmanuel Ouam, Anna Ning Ntuh, Glory Ngongeh Amambo, Victor Narcisse Tchamatchoua Gandjui, Valerine Chawa Chunda, Franck Nietcho, Lucy Cho Nchang, Chefor Magha, Jerome Fru Cho, Mathias Eyong
    Pathogens.2024; 13(2): 146.     CrossRef
  • Navigating towards dry root rot resistance in mungbean: impacts, mechanisms, and management strategies
    Nithyananth Hemanth Sadhana, Subramaniam Geethanjali, Rishabh Mirchandani, Senthil Natesan, Muthappa Senthil-Kumar
    Plant Physiology Reports.2024; 29(3): 439.     CrossRef
  • A sequential liquid dispensing method in a centrifugal microfluidic device operating at a constant rotational speed for the multiplexed genetic detection of foodborne pathogens
    Daigo Natsuhara, Yuka Kiba, Ryogo Saito, Shunya Okamoto, Moeto Nagai, Yusuke Yamauchi, Masashi Kitamura, Takayuki Shibata
    RSC Advances.2024; 14(31): 22606.     CrossRef
  • Enhanced pyrophosphate detection: Utilizing oPD-derived carbon dots and Fe3+ interactions in a paper strip biosensor
    Rishabh Garg, Dinesh Prasad
    Biochemical and Biophysical Research Communications.2024; 739: 150577.     CrossRef
  • Molecular Detection of Respiratory Tract Viruses in Chickens at the Point of Need by Loop-Mediated Isothermal Amplification (LAMP)
    Mohamed El-Tholoth, Haim H. Bau
    Viruses.2024; 16(8): 1248.     CrossRef
  • Development of the Visual Loop-Mediated Isothermal Amplification Combined with Lateral Flow Dipstick (LAMP-LFD) Method for Rapid Detection of Vibrio harveyi in Aquatic Animals
    S. H. Cai, Z. Chen, L. J. Sun, J. Zhong, Y. C. Huang, S. P. Yang, Y. S. Lu
    Applied Biochemistry and Microbiology.2024; 60(4): 749.     CrossRef
  • An Optimized CRISPR/Cas12a Assay to Facilitate the BRAF V600E Mutation Detection
    Azadeh Etemadzadeh, Pouya Salehipour, Fatemeh Movahedi Motlagh, Masoomeh Khalifeh, Adnan Asadbeigi, Mina Tabrizi, Reza Shirkouhi, Mohammad Hossein Modarressi
    Journal of Clinical Laboratory Analysis.2024;[Epub]     CrossRef
  • Comparison and Optimization of Simple DNA Extraction Methods for LAMP-Based Point-of-Care Applications Employing Submillimeter Skin Biopsies
    Juan M. Boza, Jason Cade Manning, David C. Erickson
    ACS Omega.2024; 9(37): 38855.     CrossRef
  • Rapid, on-site and yes-or-no detection of Salmonella typhimurium in foods using Argonaute-enabled assay
    Jiali Qiao, Jingyu Jia, Weipan Peng, Minghui Lu, Yaru Li, Shuli Man, Shengying Ye, Long Ma
    Sensors and Actuators B: Chemical.2024; 404: 135263.     CrossRef
  • Pathogenicity and virulence of African swine fever virus
    Ines Ruedas-Torres, Bui Thi to Nga, Francisco J. Salguero
    Virulence.2024;[Epub]     CrossRef
  • D-Glucose-Mediated Gold Nanoparticle Fabrication for Colorimetric Detection of Foodborne Pathogens
    Seo Yeon Park, Rajamanickam Sivakumar, Nae Yoon Lee
    Biosensors.2024; 14(6): 284.     CrossRef
  • Next‐generation methods for early disease detection in crops
    Daniela Trippa, Riccardo Scalenghe, Marcos Fernando Basso, Stefano Panno, Salvatore Davino, Chiara Morone, Antonio Giovino, Safa Oufensou, Nicola Luchi, Sanaz Yousefi, Federico Martinelli
    Pest Management Science.2024; 80(2): 245.     CrossRef
  • Circulating tumor RNA and exosomes as disease prognosis and therapy effectivity novel markers in case of malignant gliomas in adults
    Elizaveta V. Ermolaeva, Sofia S. Sklyar, Nikolai V. Tsygan, Bobir I. Safarov, Victoria S. Kushnirova, Olesya I. Timaeva, Andrei G. Vasiliev, Alexandr P. Trashkov, Anna V. Vasilieva
    Pediatrician (St. Petersburg).2024; 14(5): 71.     CrossRef
  • Reverse transcriptase loop-mediated isothermal amplification assisted with localized surface plasmon resonance of gold nanorods for viability assessment of Lactobacillus acidophilus in yogurt
    Zahra Valipanah, Pooria Gill, Abolghasem Rahmani, Adele Rafati
    International Dairy Journal.2024; 158: 106034.     CrossRef
  • Gravity-driven and rotation-controlled microfluidic chip for point-of-care nucleic acid detection in the fully closed environment
    Yanju Chen, Yuanyuan Zhu, Xiaofu Wang, Cheng Peng, Rui Wang, Tingzhang Wang, Yang Che, Jian Wu, Junfeng Xu
    Talanta.2024; 267: 125258.     CrossRef
  • Research progress of severe acute respiratory syndrome coronavirus 2 on aerosol collection and detection
    Xinyu Zhang, Yuting Chen, Yueying Pan, Xinye Ma, Gui Hu, Song Li, Yan Deng, Zhu Chen, Hui Chen, Yanqi Wu, Zhihong Jiang, Zhiyang Li
    Chinese Chemical Letters.2024; 35(1): 108378.     CrossRef
  • Comprehensive evaluation on progressive development strategies in DENV surveillance and monitoring infection rate among vector population
    Bidisha Das, Sibnarayan Datta, Vanlalhmuaka, Pichili Vijaya Bhaskar Reddy
    Journal of Vector Borne Diseases.2024; 61(3): 327.     CrossRef
  • The development of a loop-mediated isothermal amplification (LAMP) assay to detect American foulbrood in managed honey bee populations
    Danielle Ackerly, Lily Tran, Travis Beddoe
    Apidologie.2024;[Epub]     CrossRef
  • The Development of a Multienzyme Isothermal Rapid Amplification Assay to Visually Detect Duck Hepatitis B Virus
    Shuqi Xu, Yuanzhuo Man, Xin Xu, Jun Ji, Yan Wang, Lunguang Yao, Qingmei Xie, Yingzuo Bi
    Veterinary Sciences.2024; 11(5): 191.     CrossRef
  • Diagnosis of extraintestinal pathogenic Escherichia coli pathogenesis in urinary tract infection
    Deenadayalan Karaiyagowder Govindarajan, Biniam Moges Eskeziyaw, Kumaravel Kandaswamy, Degisew Yinur Mengistu
    Current Research in Microbial Sciences.2024; 7: 100296.     CrossRef
  • Establishment and evaluation of a new fluorescent probe method based on loop‐mediated isothermal amplification for the detection of Mycobacterium tuberculosis complex
    Mireguli Batuer, Yue Yuan, Mengsi Yu, Cunren Meng
    Luminescence.2024;[Epub]     CrossRef
  • Efficacy evaluation of novel test based on isothermal amplification for the detection of tuberculosis pathogen DNA in vitro
    Yu.L. Mikulovich, A.I. Zaitseva, S.V. Lazebny, M.A. Plekhanova, S.V. Smerdin, G.A. Shipulin
    Laboratory Service.2024; 13(4): 36.     CrossRef
  • Development of RT-qPCR and loop-mediated isothermal amplification (LAMP) assays for the rapid detection of Rahnella aquatilis in fish
    Meijuan Shi, Yanyan Cao, Xiucai Hu, Fuli Luo, Aijun Lv
    Aquaculture.2024; 578: 740117.     CrossRef
  • Effects of storage temperature on throat swabs preserved in different transport media for detection of SARS-CoV-2 by reverse transcriptase polymerase chain reaction
    Lalita Verma, Saroj Hooja, Rajeev Yadav, Nita Pal, Kaamini Ranawat, Bharti Malhotra
    Journal of Laboratory Physicians.2024; 17: 26.     CrossRef
  • Development of loop-mediated isothermal amplification technique for LM canola T45, 73496, and MON88302 and its field application
    Wonkyun Choi, A-Mi Yoon, Hye Song Lim, Jung Ro Lee
    Plant Biotechnology Reports.2023; 17(6): 947.     CrossRef
  • Rapid Discrimination of Panax quinquefolium and Panax ginseng Using the Proofman-Duplex-LMTIA Technique
    Xiaodong Zhang, Zongding Li, Yaoxuan Zhang, Dandan Xu, Liang Zhang, Fugang Xiao, Deguo Wang
    Molecules.2023; 28(19): 6872.     CrossRef
  • Nucleic acid amplification with specific signal filtration and magnification for ultrasensitive colorimetric detection
    Hongfei He, Yan Zhou, Bin Chen, Yi Zhang, Xiaowu Zhong, Lei Xu, Bin Guo, Chong Yin, Xi Zhou, Qingrong Li, Zhen Huang, Guangcheng Luo, Xiaolan Guo
    Talanta.2023; 253: 123978.     CrossRef
  • Various Techniques for Molecular and Rapid Detection of Infectious and Epidemic Diseases
    Mohamad Hesam Shahrajabian, Wenli Sun
    Letters in Organic Chemistry.2023; 20(9): 779.     CrossRef
  • Recombinase polymerase amplification in combination with electrochemical readout for sensitive and specific detection of PIK3CA point mutations
    Vanessa Thoeny, Eva Melnik, Melanie Huetter, Malahat Asadi, Pooyan Mehrabi, Thomas Schalkhammer, Walter Pulverer, Thomas Maier, Giorgio C. Mutinati, Peter Lieberzeit, Rainer Hainberger
    Analytica Chimica Acta.2023; 1281: 341922.     CrossRef
  • Plasmonic Nanostructure Biosensors: A Review
    Huimin Wang, Tao Wang, Xuyang Yuan, Yuandong Wang, Xinzhao Yue, Lu Wang, Jinyan Zhang, Jian Wang
    Sensors.2023; 23(19): 8156.     CrossRef
  • First field study using Strong-LAMP for diagnosis of strongyloidiasis in Cubal, Angola
    Beatriz Crego-Vicente, Begoña Febrer-Sendra, Arlette Nindia, Agostinho Pessela, Sandra Aixut, Joan Martínez-Campreciós, Alejandro Mediavilla, Aroa Silgado, Elena Sulleiro, Begoña Treviño, Israel Molina, Antonio Muro, Fernando Salvador, Pedro Fernández-Sot
    Parasites & Vectors.2023;[Epub]     CrossRef
  • Point‐of‐Care Diagnostic Platforms for Loop‐Mediated Isothermal Amplification
    Nazente Atceken, Muhammad Munzer Alseed, Sajjad Rahmani Dabbagh, Ali K. Yetisen, Savas Tasoglu
    Advanced Engineering Materials.2023;[Epub]     CrossRef
  • Identification of Fish Species and Targeted Genetic Modifications Based on DNA Analysis: State of the Art
    Eliska Cermakova, Simona Lencova, Subham Mukherjee, Petra Horka, Simon Vobruba, Katerina Demnerova, Kamila Zdenkova
    Foods.2023; 12(1): 228.     CrossRef
  • An isothermal enzymatic recombinase amplification (ERA) assay for rapid and accurate detection of Enterocytozoon hepatopenaei infection in shrimp
    Jiaobing Li, Yan Wang, Jingjie Hu, Zhenmin Bao, Mengqiang Wang
    Journal of Invertebrate Pathology.2023; 197: 107895.     CrossRef
  • First definitive host record of Liopteridae revealed by biological observations and molecular biological assays: Paramblynotus koreanus (Hymenoptera: Liopteridae) is a parasitoid of Carcilia strigicollis (Coleoptera: Curculionidae)
    Hiroshi Kodama, Tatsuya Ide
    Applied Entomology and Zoology.2023; 58(4): 387.     CrossRef
  • Enzyme-free and sensitive method for single-stranded nucleic acid detection based on CHA and HCR
    Xiaolong Chen, Chaowang Huang, Fuping Nie, Mingdong Hu
    Analytical Methods.2023; 15(34): 4243.     CrossRef
  • Novel DNA nanoflower biosensing technologies towards next-generation molecular diagnostics
    Jing Sheng, Yan Pi, Shuang Zhao, Binpan Wang, Ming Chen, Kai Chang
    Trends in Biotechnology.2023; 41(5): 653.     CrossRef
  • A Hypothetical Approach to Concentrate Microorganisms from Human Urine Samples Using Paper-Based Adsorbents for Point-of-Care Molecular Assays
    Isha Uttam, Sujesh Sudarsan, Rohitraj Ray, Raja Chinnappan, Ahmed Yaqinuddin, Khaled Al-Kattan, Naresh Kumar Mani
    Life.2023; 14(1): 38.     CrossRef
  • Overview of African Horse Sickness Virus Detection Technology
    晓娜 赵
    Hans Journal of Agricultural Sciences.2023; 13(10): 910.     CrossRef
  • Advances in molecular infectious diseases testing in the time of COVID-19
    David R. Peaper, Christopher A. Kerantzas, Thomas J.S. Durant
    Clinical Biochemistry.2023; 117: 94.     CrossRef
  • Development of environmental loop-mediated isothermal amplification (eLAMP) diagnostic tool for Bulinus truncatus field detection
    Manon Blin, Bruno Senghor, Jérôme Boissier, Stephen Mulero, Olivier Rey, Julien Portela
    Parasites & Vectors.2023;[Epub]     CrossRef
  • Recent Uses of Paper Microfluidics in Isothermal Nucleic Acid Amplification Tests
    Jocelyn Reynolds, Reid S. Loeffler, Preston J. Leigh, Hannah A. Lopez, Jeong-Yeol Yoon
    Biosensors.2023; 13(9): 885.     CrossRef
  • Shining a LAMP on the applications of isothermal amplification for monitoring environmental biosecurity
    Nathan Deliveyne, Jennifer M. Young, Jeremy J. Austin, Phillip Cassey
    NeoBiota.2023; 82: 119.     CrossRef
  • Development of loop-mediated isothermal amplification (LAMP) assays using five primers reduces the false-positive rate in COVID-19 diagnosis
    Galyah Alhamid, Huseyin Tombuloglu, Ebtesam Al-Suhaimi
    Scientific Reports.2023;[Epub]     CrossRef
  • Isothermal nucleic acid amplification and its uses in modern diagnostic technologies
    Pulkit Srivastava, Dinesh Prasad
    3 Biotech.2023;[Epub]     CrossRef
  • Validation of quantitative loop-mediated isothermal amplification assay using a fluorescent distance-based paper device for detection of Escherichia coli in urine
    Natkrittaya Saengsawang, Panthita Ruang-areerate, Nuanlaong Kaeothaisong, Saovanee Leelayoova, Mathirut Mungthin, Piraporn Juntanawiwat, Patomroek Hanyanunt, Patsanun Potisuwan, Piyanate Kesakomol, Pornphan Butsararattanagomen, Pattarawadee Wichaiwong, Wi
    Scientific Reports.2023;[Epub]     CrossRef
  • Paper-Based Loop Mediated Isothermal Amplification (LAMP) Platforms: Integrating the Versatility of Paper Microfluidics with Accuracy of Nucleic Acid Amplification Tests
    Debayan Das, Manaswini Masetty, Aashish Priye
    Chemosensors.2023; 11(3): 163.     CrossRef
  • Gold Nanoparticle-Based Plasmonic Biosensors
    Enrico Ferrari
    Biosensors.2023; 13(3): 411.     CrossRef
  • Changing the diagnostic paradigm for sugarcane: development of a mill-based diagnostic for ratoon stunting disease in crude cane juice
    Sriti Burman, Michael G. Mason, Jessica Hintzsche, Yiping Zou, Lucy Gibbs, Laura MacGillycuddy, Robert C. Magarey, José R. Botella
    Frontiers in Plant Science.2023;[Epub]     CrossRef
  • Rapid extraction-free detection of the R132H isocitrate dehydrogenase mutation in glioma using colorimetric peptide nucleic acid-loop mediated isothermal amplification (CPNA-LAMP)
    Kristian A. Choate, Edward J. Raack, Veronica F. Line, Matthew J. Jennings, Robert J. Belton, Robert J. Winn, Paul B. Mann, Avaniyapuram Kannan Murugan
    PLOS ONE.2023; 18(9): e0291666.     CrossRef
  • Evaluation of kit-based loop-mediated isothermal amplification (TB-LAMP) assay in the diagnosis of tubercular lymphadenitis
    Saurav Das, Neeraj Nischal, Binit Kumar Singh, Animesh Ray, Pankaj Jorwal, Manish Soneja, Maroof Ahmad Khan, Kapil Sikka, Sanjeev Sinha, Naveet Wig
    Access Microbiology .2023;[Epub]     CrossRef
  • Detection by Sensitive Real-Time Reverse Transcription Loop-Mediated Isothermal Amplification of Olive Leaf Yellowing Associated Virus and Its Incidence in Italy and Spain
    Andrea Giovanni Caruso, Sofia Bertacca, Arianna Ragona, Graziella Agrò, Maria Isabel Font-San-Ambrosio, Ana Alfaro-Fernández, Rocío Estévez Sánchez, Stefano Panno, Salvatore Davino
    Horticulturae.2023; 9(6): 702.     CrossRef
  • Photoinduced electron transfer detection method for identifying UGT1A1*28 microsatellites
    Shirou Tsuchida, Noriaki Himi, Yuuki Miura, Suzune Kodama, Tsugumi Shindo, Koji Nakagawa, Takashi Aoki, Stephen D. Ginsberg
    PLOS ONE.2023; 18(8): e0289506.     CrossRef
  • Establishment of the Recombinase Polymerase Amplification–Lateral Flow Dipstick Detection Technique for Fusarium oxysporum
    Shuodan Hu, Chenyi Yan, Hong Yu, Yu Zhang, Chuan-Qing Zhang
    Plant Disease.2023; 107(9): 2665.     CrossRef
  • Development of a Novel Phagomagnetic-Assisted Isothermal DNA Amplification System for Endpoint Electrochemical Detection of Listeria monocytogenes
    Cláudia Maciel, Nádia F. D. Silva, Paula Teixeira, Júlia M. C. S. Magalhães
    Biosensors.2023; 13(4): 464.     CrossRef
  • Advancements in the Worldwide Detection of Severe Fever with Thrombocytopenia Syndrome Virus Infection from 2009 to 2023
    Lin Ai, Wei Wang, Zheng Teng
    China CDC Weekly.2023; 5(31): 687.     CrossRef
  • A hairpin probe-mediated exponential amplification reaction for highly sensitive and specific detection of microRNAs
    Hongyan Yu, Zhi Weng, Xi Zhou, Dan Bai, Wang Luo, Xiaole Han, Lin Song, Qian Liu, Junjie Li, Yujun Yang, Yongcan Guo, Ke Lv, Guoming Xie
    Chemical Communications.2023; 59(28): 4158.     CrossRef
  • Rapid and Visual Determination of Cronobacter sakazakii in Powdered Infant Formula Using Competitive Annealing Mediated Isothermal Amplification (CAMP)
    Xu Chen, Wei Li, Yue Ma
    Analytical Letters.2023; 56(14): 2262.     CrossRef
  • Machine learning at the edge for AI-enabled multiplexed pathogen detection
    Vahid Ganjalizadeh, Gopikrishnan G. Meena, Matthew A. Stott, Aaron R. Hawkins, Holger Schmidt
    Scientific Reports.2023;[Epub]     CrossRef
  • DNA compaction enhances the sensitivity of fluorescence-based nucleic acid assays: a game changer in point of care sensors?
    Sujesh Sudarsan, Anusha Prabhu, Dinesh Prasad, Naresh Kumar Mani
    The Analyst.2023; 148(10): 2295.     CrossRef
  • Loop-mediated isothermal amplification (LAMP)/Cas12a assay for detection of Ralstonia solanacearum in tomato
    Zhiyu Fan, Yuxia Mei, Jiawei Xing, Tian Chen, Di Hu, Hui Liu, Yingjun Li, Derui Liu, Zufeng Liu, Yunxiang Liang
    Frontiers in Bioengineering and Biotechnology.2023;[Epub]     CrossRef
  • Advances in point-of-care genetic testing for personalized medicine applications
    A. S. de Olazarra, S. X. Wang
    Biomicrofluidics.2023;[Epub]     CrossRef
  • Multi-throughput POCT Technology Based on RPA and CRISPR/Cas12a and Its Application in Detection of Adulterated Meat
    Wei Ding, Tanfen Fang, Yan Liu, Ling Zhang, Bo Wang, Wanping Sun
    ACS Food Science & Technology.2023; 3(3): 514.     CrossRef
  • Strategy of functional nucleic acids-mediated isothermal amplification for detection of foodborne microbial contaminants: A review
    Jie Zhou, Teng-Yu Wang, Zhi Lan, Han-Jie Yang, Xing-Jian Ye, Rui Min, Zhao-Hui Wang, Qing Huang, Jing Cao, Yu-E Gao, Wen-Long Wang, Xiu-Lan Sun, Yi Zhang
    Food Research International.2023; 173: 113286.     CrossRef
  • Reverse Transcriptase Enzyme-assisted recombinant isothermal amplification with CRISPR/Cpf1 for RNA virus assay
    Yifan Xiong, Gaihua Cao, Fuping Nie, Meimei Shi, Jun Yang, Yingguo Li, Danqun Huo, Changjun Hou
    Process Biochemistry.2023; 130: 358.     CrossRef
  • Mayaro virus detection by integrating sample preparation with isothermal amplification in portable devices
    Morteza Alipanah, Carlos Manzanas, Xin Hai, John A. Lednicky, Alberto Paniz-Mondolfi, J. Glenn Morris, Z. Hugh Fan
    Analytical and Bioanalytical Chemistry.2023; 415(23): 5605.     CrossRef
  • Rapid and accurate detection of SARS-CoV-2 using the RHAM technology
    Zhuo Xiao, Xiaoli Liu, Xiaolong Kang, Yaoheng Feng, Lijun Zheng, Chong Chen
    Scientific Reports.2023;[Epub]     CrossRef
  • Current and Future Advances in the Detection and Surveillance of Biosecurity-Relevant Equine Bacterial Diseases Using Loop-Mediated Isothermal Amplification (LAMP)
    Alexandra Knox, Gemma Zerna, Travis Beddoe
    Animals.2023; 13(16): 2663.     CrossRef
  • Loop-Mediated Isothermal Amplification of DNA (LAMP) as an Alternative Method for Determining Bacteria in Wound Infections
    Monika Gieroń, Paulina Żarnowiec, Katarzyna Zegadło, Dawid Gmiter, Grzegorz Czerwonka, Wiesław Kaca, Beata Kręcisz
    International Journal of Molecular Sciences.2023; 25(1): 411.     CrossRef
  • Rapid SARS-CoV-2 RT-LAMP Assay Setup using Gene Construct Design Approach
    Mohsen Vaez, Nazanin Kazemimejad, Jalil Fallah Mehrabadi
    Iranian Journal of Medical Microbiology.2023; 17(3): 329.     CrossRef
  • A flash signal amplification approach for ultrasensitive and rapid detection of single nucleotide polymorphisms in tuberculosis
    Wei-Ting Chen, Ping-Yeh Chiu, Chien-Fu Chen
    Biosensors and Bioelectronics.2023; 237: 115514.     CrossRef
  • Advances and Challenges in Cytomegalovirus Detection Methods for Liver Transplant Donors
    Xiaoping Li, Yiwu Zhong, Yinbiao Qiao, Haoyu Li, Xu Hu, Saber Imani, Shusen Zheng, Jianhui Li
    Diagnostics.2023; 13(21): 3310.     CrossRef
  • Hybrid Digital-Droplet Microfluidic Chip for Applications in Droplet Digital Nucleic Acid Amplification: Design, Fabrication and Characterization
    Beatriz Coelho, Joana Neto, Bárbara Sieira, André Moura, Elvira Fortunato, Rodrigo Martins, Pedro Baptista, Rui Igreja, Hugo Águas
    Sensors.2023; 23(10): 4927.     CrossRef
  • Solid-State Nanopore Sensors with Enhanced Sensitivity through Nucleic Acid Amplification
    Xiaojin Zhang, Huimin Dou, Xiaorui Chen, Meihua Lin, Yu Dai, Fan Xia
    Analytical Chemistry.2023; 95(47): 17153.     CrossRef
  • Isothermal nucleic acid amplification technology for rapid detection of virus
    Zhenting Wei, Xiaowen Wang, Huhu Feng, Fanpu Ji, Dan Bai, Xiaoping Dong, Wei Huang
    Critical Reviews in Biotechnology.2023; 43(3): 415.     CrossRef
  • Rapid, multiplex detection of SARS-CoV-2 using isothermal amplification coupled with CRISPR-Cas12a
    Diogo Figueiredo, António Cascalheira, Joao Goncalves
    Scientific Reports.2023;[Epub]     CrossRef
  • Primer design and optimization of loop-mediated isothermal amplification (LAMP) for specific detection of genes isoniazid-resistant Mycobacterium tuberculosis
    O N Aulia, D H Putri, L Chaidir, M Yusuf, K Kurniawan, I Faizal
    IOP Conference Series: Earth and Environmental Science.2023; 1271(1): 012082.     CrossRef
  • Identification of the novel potential pathogen Trueperella pecoris with interspecies significance by LAMP diagnostics
    Antonia Kreitlow, Siti Gusti Ningrum, Christoph Lämmler, Marcel Erhard, Christiane Hoffmann, Madeleine Plötz, Amir Abdulmawjood
    Scientific Reports.2023;[Epub]     CrossRef
  • Pitaya Virus X Coat Protein Acts as an RNA Silencing Suppressor and Can Be Used as a Specific Target for Detection Using RT-LAMP
    Yue Zhao, Shutong Yang, Ling Jiang, Qian Yang, Liting Luo, Junmei Jiang, Srihunsa Malichan, Jin Zhao, Xin Xie
    Plant Disease.2023;[Epub]     CrossRef
  • Advanced Strategies for Developing Vaccines and Diagnostic Tools for African Swine Fever
    Jong-Woo Lim, Thi Thu Hang Vu, Van Phan Le, Minjoo Yeom, Daesub Song, Dae Gwin Jeong, Song-Kyu Park
    Viruses.2023; 15(11): 2169.     CrossRef
  • Portable and Battery-Operated Isothermal Amplification Device Validation for Onsite Analysis of M. tuberculosis “DNA Hunter”
    H. Esra Agel
    Indonesian Journal of Tropical and Infectious Disease.2023; 11(1): 1.     CrossRef
  • A LAMP Assay for Rapid Detection of the Pitch Canker Pathogen Fusarium circinatum
    Colton D. Meinecke, Lieschen De Vos, Neriman Yilmaz, Emma T. Steenkamp, Michael J. Wingfield, Brenda D. Wingfield, Caterina Villari
    Plant Disease.2023; 107(10): 2916.     CrossRef
  • A Miniaturized System for Rapid, Isothermal Detection of SARS-CoV-2 in Human and Environmental Samples
    Jake Staples, Athanasia-Maria Dourou, Irene Liampa, Calvin Sjaarda, Emily Moslinger, Henry Wong, Prameet M. Sheth, Stilianos Arhondakis, Ravi Prakash
    Biomedicines.2023; 11(7): 2038.     CrossRef
  • Fano resonance-induced high-purity circularly polarized spectra for high-precision refractive index sensing from hybrid resonator-graphene meta-surfaces
    Yazheng Hao, Rui Yang
    Optics Express.2023; 31(2): 3059.     CrossRef
  • Monitoring Spore Dispersal and Early Infections of Diplocarpon coronariae Causing Apple Blotch Using Spore Traps and a New qPCR Method
    Clémence Boutry, Anne Bohr, Sascha Buchleither, Mathias Ludwig, Thomas Oberhänsli, Lucius Tamm, Hans-Jakob Schärer, Pascale Flury
    Phytopathology®.2023; 113(3): 470.     CrossRef
  • Development of Colloidal Gold Immunochromatography and Reverse-Transcription Loop-Mediated Isothermal Amplification Assays to Detect Lychnis Mottle Virus
    Weijie Jin, Yubao Zhang, Xuesi Su, Ruoyu Wang, Zhongkui Xie, Yajun Wang, Yang Qiu
    Plant Disease.2023; 107(5): 1584.     CrossRef
  • Rapid and sensitive on-site detection of SARS-CoV-2 RNA from environmental surfaces using portable laboratory devices
    Kouichi Kitamura, Minami Kikuchi Ueno, Hiromu Yoshida, Rebekah M. Martin
    Microbiology Spectrum.2023;[Epub]     CrossRef
  • Rapid detection of apple latent spherical virus infecting Angelica sinensis by gold immunochromatography reverse transcription loop-mediated isothermal amplification assay
    Weijie Jin, Yubao Zhang, Xuesi Su, Ruoyu Wang, Zhongkui Xie, Yajun Wang, Yang Qiu, Xia Zhao
    Crop Protection.2023; 169: 106254.     CrossRef
  • Taxonomy and Biological Control: New Challenges in an Old Relationship
    Eduardo Mitio Shimbori, Ranyse Barbosa Querino, Valmir Antonio Costa, Roberto Antonio Zucchi
    Neotropical Entomology.2023; 52(3): 351.     CrossRef
  • A novel assay based on DNA melting temperature for multiplexed identification of SARS-CoV-2 and influenza A/B viruses
    Peng Gao, Yanyan Fan, Xiaomu Kong, Rui Zhang, Lida Chen, Yongwei Jiang, Yi Liu, Meimei Zhao, Guoxiong Deng, Yongtong Cao, Liang Ma
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Rapid and sensitive LAMP/CRISPR-powered diagnostics to detect different hepatitis C virus genotypes using an ITO-based EG-FET biosensing platform
    Hsin-Ying Ho, Wei-Sin Kao, Piyush Deval, Chia-Yen Dai, Yen-Hsu Chen, Ming-Lung Yu, Che-Hsin Lin, Ling-Shan Yu
    Sensors and Actuators B: Chemical.2023; 394: 134278.     CrossRef
  • A digital microfluidic platform coupled with colorimetric loop-mediated isothermal amplification for on-site visual diagnosis of multiple diseases
    Mei Xie, Tianlan Chen, Zongwei Cai, Bo Lei, Cheng Dong
    Lab on a Chip.2023; 23(12): 2778.     CrossRef
  • Diagnostic Value of Nucleic Acid Amplification Tests for Tuberculous Pleural Effusion
    Xu-Hui Wen, Yu-Ling Han, Xi-Shan Cao, Wen Zhao, Zhi Yan, Li Yan, Jian-Xun Wen, Zhi-De Hu, Wen-Qi Zheng
    Future Microbiology.2023; 18(14): 971.     CrossRef
  • Rapid and highly sensitive LAMP-CRISPR/Cas12a-based identification of bovine mastitis milk samples contaminated by Escherichia coli
    Aisha Shaizadinova, Meruyert Amanzholova, Saveliy Kirillov, Aitbay Bulashev, Sailau Abeldenov
    Journal of Agriculture and Food Research.2023; 14: 100721.     CrossRef
  • Development of a Naked Eye CRISPR-Cas12a and -Cas13a Multiplex Point-of-Care Detection of Genetically Modified Swine
    Yuan Wang, Lanting Fu, Dagang Tao, Xiaosong Han, Bingrong Xu, Manfei Deng, Sheng Li, Changzhi Zhao, Xinyun Li, Shuhong Zhao, Ping Gong, Yu Yang, Emmanuel Mulaya Khazalwa, Yunlong Ma, Jinxue Ruan, Changchun Li, Shengsong Xie
    ACS Synthetic Biology.2023; 12(7): 2051.     CrossRef
  • One-pot platform for rapid detecting virus utilizing recombinase polymerase amplification and CRISPR/Cas12a
    Yifan Xiong, Gaihua Cao, Xiaolong Chen, Jun Yang, Meimei Shi, Yu Wang, Fuping Nie, Danqun Huo, Changjun Hou
    Applied Microbiology and Biotechnology.2022; 106(12): 4607.     CrossRef
  • RNA-based isothermal amplification technology and its clinical application in pathogen infection
    Jie Teng, Fang Liu, Li Chang, Qiuxia Yang, Guanglu Che, Shuyu Lai, Yuan Tan, Jiaxin Duan, Yongmei Jiang
    Reviews in Analytical Chemistry.2022; 41(1): 301.     CrossRef
  • Loop-Mediated Isothermal Amplification Coupled With Nanoparticle-Based Lateral Biosensor for Rapid, Sensitive, and Specific Detection of Bordetella pertussis
    Chunrong Sun, Fei Xiao, Jin Fu, Xiaolan Huang, Nan Jia, Zheng Xu, Yi Wang, Xiaodai Cui
    Frontiers in Bioengineering and Biotechnology.2022;[Epub]     CrossRef
  • Sensitive, Single-Pot, Two-Stage Assay for Hepatitis Viruses
    Youngung Seok, Qingtian Yin, Huiwen Bai, Haim H. Bau
    Analytical Chemistry.2022; 94(3): 1778.     CrossRef
  • Loop-Mediated Isothermal Amplification (LAMP) and SYBR Green qPCR for Fast and Reliable Detection of Geosmithia morbida (Kolařik) in Infected Walnut
    Domenico Rizzo, Chiara Aglietti, Alessandra Benigno, Matteo Bracalini, Daniele Da Lio, Linda Bartolini, Giovanni Cappellini, Antonio Aronadio, Cristina Francia, Nicola Luchi, Alberto Santini, Santa Olga Cacciola, Tiziana Panzavolta, Salvatore Moricca
    Plants.2022; 11(9): 1239.     CrossRef
  • End-to-end system for rapid and sensitive early-detection of SARS-CoV-2 for resource-poor and field-test environments using a $51 lab-in-a-backpack
    E. Emily Lin, Umar A. Razzaque, Stephen A. Burrows, Stoyan K. Smoukov, Etsuro Ito
    PLOS ONE.2022; 17(1): e0259886.     CrossRef
  • An Advanced One-Step RT-LAMP for Rapid Detection ofLittle cherry virus 2Combined with High-Throughput Sequence-Based Phylogenomics Reveal Divergent Flowering Cherry Isolates
    Rachid Tahzima, Yoika Foucart, Gertie Peusens, Jean-Sébastien Reynard, Sébastien Massart, Tim Beliën, Kris De Jonghe
    Plant Disease.2022; 106(3): 835.     CrossRef
  • New Frontier in Terahertz Technologies for Virus Sensing
    Tiziana Mancini, Augusto Marcelli, Stefano Lupi, Annalisa D’Arco
    Electronics.2022; 12(1): 135.     CrossRef
  • A microfluidic diagnostic device with air plug-in valves for the simultaneous genetic detection of various food allergens
    Daigo Natsuhara, Sae Misawa, Ryogo Saito, Koki Shirai, Shunya Okamoto, Moeto Nagai, Masashi Kitamura, Takayuki Shibata
    Scientific Reports.2022;[Epub]     CrossRef
  • A Systematic Review on Suitability of Molecular Techniques for Diagnosis and Research into Infectious Diseases of Concern in Resource-Limited Settings
    Akua K. Yalley, Selasie Ahiatrogah, Anna A. Kafintu-Kwashie, Gloria Amegatcher, Diana Prah, Akua K. Botwe, Mildred A. Adusei-Poku, Evangeline Obodai, Nicholas I. Nii-Trebi
    Current Issues in Molecular Biology.2022; 44(10): 4367.     CrossRef
  • Detection and Control of Pantoea agglomerans Causing Plum Bacterial Shot-Hole Disease by Loop-Mediated Isothermal Amplification Technique
    Ran Shu, Xianhui Yin, Youhua Long, Jun Yuan, Houyin Zhou
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Accurate Detection of Salmonella Based on Microfluidic Chip to Avoid Aerosol Contamination
    Yining Luo, Shan Shan, Shuanglong Wang, Jinlin Li, Daofeng Liu, Weihua Lai
    Foods.2022; 11(23): 3887.     CrossRef
  • Salmonella spp. in Chicken: Prevalence, Antimicrobial Resistance, and Detection Methods
    Si Jie Tan, Syamilah Nordin, Effarizah Mohd Esah, Norlia Mahror
    Microbiology Research.2022; 13(4): 691.     CrossRef
  • Comparative analysis of methods for isothermal amplification of nucleic acids
    O. S. Chemisova, O. A. Tsyrulina, A. L. Trukhachev, A. K. Noskov
    Journal of microbiology, epidemiology and immunobiology.2022; 99(1): 126.     CrossRef
  • Rapid detection of hepatitis C virus using recombinase polymerase amplification
    Catherine T. Chia, Andrew T. Bender, Lorraine Lillis, Benjamin P. Sullivan, Coleman D. Martin, Wynn Burke, Charles Landis, David S. Boyle, Jonathan D. Posner, Kiyoshi Yasukawa
    PLOS ONE.2022; 17(10): e0276582.     CrossRef
  • Development of a photothermal bead-based nucleic acid amplification test (pbbNAAT) technique for a high-performance loop-mediated isothermal amplification (LAMP)–based point-of-care test (POCT)
    Chih-Yu Chen, Hung-Wei Yang, Ping-Han Hsieh, Chia-Hsun Hsieh, Min-Hsien Wu
    Biosensors and Bioelectronics.2022; 215: 114574.     CrossRef
  • Development and Validation of a Novel COVID-19 nsp8 One-Tube RT-LAMP-CRISPR Assay for SARS-CoV-2 Diagnosis
    Cyril Chik-Yan Yip, Siddharth Sridhar, Wan-Mui Chan, Jonathan Daniel Ip, Allen Wing-Ho Chu, Kit-Hang Leung, Vincent Chi-Chung Cheng, Kwok-Yung Yuen, Kelvin Kai-Wang To, Frederick S. B. Kibenge
    Microbiology Spectrum.2022;[Epub]     CrossRef
  • Electrochemical Detection for Isothermal Loop-Mediated Amplification of Pneumolysin Gene of Streptococcus pneumoniae Based on the Oxidation of Phenol Red Indicator
    Andrea González-López, María Dolores Cima-Cabal, Pablo Rioboó-Legaspi, Estefanía Costa-Rama, María del Mar García-Suárez, M. Teresa Fernández-Abedul
    Analytical Chemistry.2022; 94(38): 13061.     CrossRef
  • Advances in nucleic acid amplification techniques (NAATs): COVID-19 point-of-care diagnostics as an example
    Tongjia Kang, Jingming Lu, Tian Yu, Yi Long, Guozhen Liu
    Biosensors and Bioelectronics.2022; 206: 114109.     CrossRef
  • CRISPR-Cas Systems-Based Bacterial Detection: A Scoping Review
    Kasturi Selvam, Mohamad Ahmad Najib, Muhammad Fazli Khalid, Mehmet Ozsoz, Ismail Aziah
    Diagnostics.2022; 12(6): 1335.     CrossRef
  • Development of Loop-Mediated Isothermal Amplification (LAMP) Assay for Specific and Sensitive Detection of Mycocentrospora acerina (Hart.) Causing Round Leaf Spot Disease in Sanqi (Panax notoginseng)
    Chengzhong Lan, Lin Gan, Yuli Dai, Xiaofei Liu, Xiujuan Yang
    Horticulturae.2022; 8(11): 1060.     CrossRef
  • Development and Comparison of Seminested PCR, qPCR, and LAMP for the Rapid Detection of Arthrinium phaeospermum, the Causal Agent of Bamboo Blight
    Han Zhang, Weiyi Yang, Liling Xie, Tianhui Zhu, Shuying Li, Shan Han, Tiantian Lin, Shujiang Li
    Forests.2022; 13(6): 850.     CrossRef
  • Rapid detection of Arothron species by real-time fluorescence and colorimetric loop-mediated isothermal amplification assays targeting the mitochondrial cytochrome b gene
    Ruibin Xie, Jie Gao, Hui Li, Wenjie Yu, Juan Zhang, Nan Wang, Ailiang Chen
    Journal of Food Composition and Analysis.2022; 111: 104631.     CrossRef
  • Detection of Brucella S2 vaccine strain by a loop-mediated isothermal amplification (LAMP) method
    Jiaming Mu, Qi Li, Xu Yan, Xiaowei Mao, Yaqin Shi, Yun Qin, Chunxia Liu, Wenlong Wang
    Frontiers in Cellular and Infection Microbiology.2022;[Epub]     CrossRef
  • Cleavable molecular beacon-based loop-mediated isothermal amplification assay for the detection of adulterated chicken in meat
    Song Yan, Hangzhen Lan, Zhen Wu, Yangying Sun, Maolin Tu, Daodong Pan
    Analytical and Bioanalytical Chemistry.2022; 414(28): 8081.     CrossRef
  • Digital Droplet Loop-Mediated Isothermal Amplification Featuring a Molecular Beacon Assay, 3D Printed Droplet Generation, and Smartphone Imaging for Sequence-Specific DNA Detection
    Shu-An Hsieh, Danial Shamsaei, Derek R. Eitzmann, Jared L. Anderson
    Analytical Chemistry.2022; 94(34): 11949.     CrossRef
  • Development and Application of a Reverse-Transcription Recombinase-Aided Amplification Assay for Porcine Epidemic Diarrhea Virus
    Xiuhong Wu, Yuanjia Liu, Liguo Gao, Zhuanqiang Yan, Qiqi Zhao, Feng Chen, Qingmei Xie, Xinheng Zhang
    Viruses.2022; 14(3): 591.     CrossRef
  • Alzheimer's Disease: A Silent Pandemic - A Systematic Review on the Situation and Patent Landscape of the Diagnosis
    Luis Daniel Goyzueta-Mamani, Miguel Angel Chávez-Fumagalli, Karla Alvarez-Fernandez, Jorge A. Aguilar-Pineda, Rita Nieto-Montesinos, Gonzalo Davila Del-Carpio, Karin J. Vera-Lopez, Christian L. Lino Cardenas
    Recent Patents on Biotechnology.2022; 16(4): 355.     CrossRef
  • Electrochemical Biosensors Based on Micro‐fabricated Devices for Point‐of‐Care Testing: A Review
    Yuting Zhang, Nandi Zhou
    Electroanalysis.2022; 34(2): 168.     CrossRef
  • Development of a loop-mediated isothermal amplification assay for the rapid detection of Russula subnigricans and Russula japonica
    Pan Long, Zijuan Jiang, Zhengmi He, Zuohong Chen
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Combining recombinase polymerase amplification and DNA‐templated reaction for SARS‐CoV‐2 sensing with dual fluorescence and lateral flow assay output
    Lluc Farrera‐Soler, Arthur Gonse, Ki Tae Kim, Sofia Barluenga, Nicolas Winssinger
    Biopolymers.2022;[Epub]     CrossRef
  • Advantages and limitations of microscopy and molecular detections for diagnosis of soil-transmitted helminths: An overview
    N. Miswan, G. V. Singham, N. Othman
    Helminthologia.2022; 59(4): 321.     CrossRef
  • A precise review on NAATs‐based diagnostic assays for COVID‐19: A motion in fast POC molecular tests
    Bahareh Maleki, Zohreh Hojati
    European Journal of Clinical Investigation.2022;[Epub]     CrossRef
  • Rapid Identification of HSA Genetically Modified Goats by Combining Recombinase Polymerase Amplification (RPA) with Lateral Flow Dipstick (LFD)
    Qiuju Su, Kaifeng Guan, Xiang Zhou, Yang Zhou, Bang Liu
    Agriculture.2022; 12(7): 927.     CrossRef
  • Preliminary establishment and validation of a loop-mediated isothermal amplification assay for convenient screening of 13 types of high-risk human papillomaviruses in cervical secretions
    Lijuan Zhang, Yan Ju, Haixu Hu, Chunhui Ma, Yan Huang, Lili Gong, Yi Liu, Lihong Bian
    Journal of Virological Methods.2022; 303: 114501.     CrossRef
  • Rapid and simple detection of influenza virus via isothermal amplification lateral flow assay
    Minju Jang, SeJin Kim, Junkyu Song, Sanghyo Kim
    Analytical and Bioanalytical Chemistry.2022; 414(16): 4685.     CrossRef
  • Internal heating method of loop-mediated isothermal amplification for detection of HPV-6 DNA
    Huan-Huan Zhu, Yuan Li, Li-Xia Wu, Ke-Sheng Wang, Yue Zhang, Qiang-Yuan Fan, Zun-Zhen Ming, Wei-Qin Chen, Wei-Wei Liu
    Microchimica Acta.2022;[Epub]     CrossRef
  • A simple and rapid method to assay SARS-CoV-2 RNA based on a primer exchange reaction
    Dayong Li, Chengjie Duan, Wenting Cheng, Youjing gong, Yanheng Yao, Xiaoping Wang, Zhongyun Wang, Yang Xiang
    Chemical Communications.2022; 58(28): 4484.     CrossRef
  • Self-Assembled Inkjet Printer for Droplet Digital Loop-Mediated Isothermal Amplification
    Zhaoxuan Fan, Yucheng Sun, Jin-Ming Lin
    Chemosensors.2022; 10(7): 247.     CrossRef
  • IS1081-based Multi-targeted LAMP: An Opportunity to Detect Tubercular Uveitis
    Megha Sharma, Ramandeep Singh, Aman Sharma, Vishali Gupta, Kusum Sharma
    Ocular Immunology and Inflammation.2022; 30(1): 168.     CrossRef
  • Circular RNA detection methods: A minireview
    Zhang Mi, Chen Zhongqiang, Jiang Caiyun, Liu Yanan, Wu Jianhua, Liu Liang
    Talanta.2022; 238: 123066.     CrossRef
  • Diagnosis of disease relevant nucleic acid biomarkers with off-the-shelf devices
    Lijuan Qi, Yan Du
    Journal of Materials Chemistry B.2022; 10(21): 3959.     CrossRef
  • Polymerase chain reaction and loop-mediated isothermal amplification targeting lic13162, lic20239, and lipL32 genes for leptospirosis diagnosis
    Violetta Dias Pacce, Margarida Neves Souza, Natasha Rodrigues de Oliveira, Frederico Schmitt Kremer, Sérgio Jorge, Nilo Ikuta, Vagner Ricardo Lunge, Odir Antônio Dellagostin
    Brazilian Journal of Microbiology.2022; 53(2): 1029.     CrossRef
  • Ultrasensitive quantitation of circulating miR-195–5p with triple strand displacement amplification cascade
    Xuzhi Wang, Shuzhi Tang, Shengnan Ye, Zhou Cheng, Jianhua Xu, Bo-wen Li, Zhuo Chen
    Talanta.2022; 242: 123300.     CrossRef
  • Distance-based paper device using combined SYBR safe and gold nanoparticle probe LAMP assay to detect Leishmania among patients with HIV
    Toon Ruang-areerate, Natkrittaya Saengsawang, Panthita Ruang-areerate, Nalin Ratnarathorn, Thanyapit Thita, Saovanee Leelayoova, Suradej Siripattanapipong, Kiattawee Choowongkomon, Wijitar Dungchai
    Scientific Reports.2022;[Epub]     CrossRef
  • Functional nucleic acid biosensors utilizing rolling circle amplification
    Roger M. Bialy, Alexa Mainguy, Yingfu Li, John D. Brennan
    Chemical Society Reviews.2022; 51(21): 9009.     CrossRef
  • SARS-CoV-2 detection methods: A comprehensive review
    Galyah Alhamid, Huseyin Tombuloglu, Ali A. Rabaan, Ebtesam Al-Suhaimi
    Saudi Journal of Biological Sciences.2022; 29(11): 103465.     CrossRef
  • Kinetics of Isothermal Dumbbell Exponential Amplification: Effects of Mix Composition on LAMP and Its Derivatives
    Maud Savonnet, Mathilde Aubret, Patricia Laurent, Yoann Roupioz, Myriam Cubizolles, Arnaud Buhot
    Biosensors.2022; 12(5): 346.     CrossRef
  • A novel rapid detection of Senecavirus A using recombinase polymerase amplification (RPA) coupled with lateral flow (LF) dipstrip
    Huibao Wang, Jinjie Dong, Tao Zhang, Fan Wang, Rui Yang, Yong Zhang, Xingxu Zhao
    Analytical Biochemistry.2022; 646: 114627.     CrossRef
  • A LAMP Assay for the Detection of Thecodiplosis japonensis, an Alien Gall Midge Species Pest of Pine Trees
    Jipeng Jiao, Lili Ren, Rumin Chen, Jing Tao, Youqing Luo
    Insects.2022; 13(6): 540.     CrossRef
  • Review in isothermal amplification technology in food microbiological detection
    Xiang Li, Xiaolong Zhang, Xiaoli Shi, Hongfei Shi, Zhouping Wang, Chifang Peng
    Food Science and Biotechnology.2022; 31(12): 1501.     CrossRef
  • A Comprehensive Evaluation of a Loop-Mediated Isothermal Amplification Assay for the Diagnosis of Pulmonary Tuberculosis in Children Using Bronchoalveolar Lavage Fluid
    Lichao Fan, Bo Guan, Moxin Cheng, Chang Liu, Yao Tian, Ran Li, Yu Chen
    Infection and Drug Resistance.2022; Volume 15: 975.     CrossRef
  • Electrochemical Gene Amplification Signal Detection of Disposable Biochips Using Electrodes
    Gyo-Rim Kim, Ji-Soo Hwang, Jong-Dae Kim, Yu-Seop Kim, Chan-Young Park
    Sensors.2022; 22(22): 8624.     CrossRef
  • Development of a Photothermal Bead-Based Nucleic Acid Amplification Test (Pbbnaat) Technique for a High-Performance Loop-Mediated Isothermal Amplification (Lamp)–Based Point-of-Care Test (Poct)
    Min-Hsien Wu, Chen Chih-Yu, Hung Wei Yang, Ping-Han Hsieh, Chia-Hsun Hsieh
    SSRN Electronic Journal .2022;[Epub]     CrossRef
  • High-quality RNA improves sensitivity of SARS-CoV-2 detection by colorimetric RT-LAMP
    Marta Puigmulé, Mònica Coll, Alexandra Pérez-Serra, Laura López, Ferran Picó, Nuria Neto, Mònica Corona, Mel·lina Pinsach-Abuin, Carles Ferrer-Costa, Maria Buxó, Francesc-Xavier Queralt, Ramon Brugada
    Experimental Biology and Medicine.2022; 247(3): 276.     CrossRef
  • Colorimetric and Real-Time Loop-Mediated Isothermal Amplification (LAMP) for Detection of Loa loa DNA in Human Blood Samples
    Begoña Febrer-Sendra, Pedro Fernández-Soto, Beatriz Crego-Vicente, Juan García-Bernalt Diego, Thuy-Huong Ta-Tang, Pedro Berzosa, Rufino Nguema, Policarpo Ncogo, María Romay-Barja, Zaida Herrador, Agustín Benito, Antonio Muro
    Diagnostics.2022; 12(5): 1079.     CrossRef
  • Development and Evaluation of Loop-Mediated Isothermal Amplification (LAMP) as a Preliminary Diagnostic Tool for Brown Root Rot Disease Caused by Phellinus noxius (Corner) G. H. Cunningham in Hong Kong Urban Tree Management
    Hao Zhang, Tze Kwun Ng, Kai Chun Lee, Zoen Wing Leung, Wai Fu Yau, Wai Shing Wong
    Sustainability.2022; 14(15): 9708.     CrossRef
  • VNN disease and status of breeding for resistance to NNV in aquaculture
    Zituo Yang, Gen Hua Yue, Sek-Man Wong
    Aquaculture and Fisheries.2022; 7(2): 147.     CrossRef
  • Progression of LAMP as a Result of the COVID-19 Pandemic: Is PCR Finally Rivaled?
    Cassidy Mannier, Jeong-Yeol Yoon
    Biosensors.2022; 12(7): 492.     CrossRef
  • Rapid and convenient detection of SARS-CoV-2 using a colorimetric triple-target reverse transcription loop-mediated isothermal amplification method
    Zhu Yang, Nicole Y. Liu, Zhiwei Zhu, Minmin Xiao, Shuzhi Zhong, Qiqi Xue, Lina Nie, Jinhong Zhao
    PeerJ.2022; 10: e14121.     CrossRef
  • Facile, Rapid, and Low-Cost Detection for Influenza Viruses and Respiratory Syncytial Virus Based on a Catalytic DNA Assembly Circuit
    Huina Wu, Mingyuan Zou, Xiaobo Fan, Feiya Su, Feng Xiao, Meiling Zhou, Yan Sun, Fengfeng Zhao, Guoqiu Wu
    ACS Omega.2022; 7(17): 15074.     CrossRef
  • Paper-Based Biosensors for the Detection of Nucleic Acids from Pathogens
    Jiangshan Wang, Josiah Levi Davidson, Simerdeep Kaur, Andres A. Dextre, Mohsen Ranjbaran, Mohamed S. Kamel, Shreya Milind Athalye, Mohit S. Verma
    Biosensors.2022; 12(12): 1094.     CrossRef
  • Development and implementation of a simple and rapid extraction-free saliva SARS-CoV-2 RT-LAMP workflow for workplace surveillance
    Zhiru Li, Jacqueline L. Bruce, Barry Cohen, Caileigh V. Cunningham, William E. Jack, Katell Kunin, Bradley W. Langhorst, Jacob Miller, Reynes A. Moncion, Catherine B. Poole, Prem K. Premsrirut, Guoping Ren, Richard J. Roberts, Nathan A. Tanner, Yinhua Zha
    PLOS ONE.2022; 17(5): e0268692.     CrossRef
  • Clinical Applications of Isothermal Diagnosis for Human Schistosomiasis
    Ursula Panzner
    Encyclopedia.2022; 2(2): 690.     CrossRef
  • Digital Microfluidics-Powered Real-Time Monitoring of Isothermal DNA Amplification of Cancer Biomarker
    Beatriz Jorge Coelho, Bruno Veigas, Luís Bettencourt, Hugo Águas, Elvira Fortunato, Rodrigo Martins, Pedro V. Baptista, Rui Igreja
    Biosensors.2022; 12(4): 201.     CrossRef
  • Circulating Abnormal Extracellular Vesicles: Their Mechanism for Crossing Blood–Brain Barrier, Effects on Central Nervous System and Detection Methods
    Boyue Fan, Jiaqi Gu, Jie Wu, Yifan Sun, Rongrong Huang, Han Shen, Xu Zhang, Zhiyang Li
    Journal of Biomedical Nanotechnology.2022; 18(3): 640.     CrossRef
  • Lab on a smartphone (LOS): A smartphone-integrated, plasmonic-enhanced optoelectrowetting (OEW) platform for on-chip water quality monitoring through LAMP assays
    Si Kuan Thio, Sung Woo Bae, Sung-Yong Park
    Sensors and Actuators B: Chemical.2022; 358: 131543.     CrossRef
  • Development of a loop-mediated isothermal amplification assay for living modified canola GT73
    A-Mi Yoon, Il Ryong Kim, Hye Song Lim, Jung Ro Lee, Wonkyun Choi
    Plant Biotechnology Reports.2022; 16(4): 479.     CrossRef
  • Inhibition of Non-specific Amplification in Loop-Mediated Isothermal Amplification via Tetramethylammonium Chloride
    MinJu Jang, Sanghyo Kim
    BioChip Journal.2022; 16(3): 326.     CrossRef
  • Establishment and Evaluation of a Loop-Mediated Isothermal Amplification Assay for Rapid Detection of Pseudomonas fluorescens in Raw Milk
    Yushan Bu, Wenjun Qiao, Zhengyuan Zhai, Tongjie Liu, Pimin Gong, Lanwei Zhang, Yanling Hao, Huaxi Yi
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Molecular detection of “Candidatus Rickettsia tarasevichiae” by Loop-mediated Isothermal Amplification (LAMP) of the ompA gene
    Jing Xue, Qing Ren, Rui Jian, Guang-Cheng Xie, Yongliang Chen, Jiangli Wang, Luanying Du, Wen-Ping Guo
    Journal of Microbiological Methods.2022; 202: 106601.     CrossRef
  • Recent advances in microfluidic devices for single-cell cultivation: methods and applications
    Dian Anggraini, Nobutoshi Ota, Yigang Shen, Tao Tang, Yo Tanaka, Yoichiroh Hosokawa, Ming Li, Yaxiaer Yalikun
    Lab on a Chip.2022; 22(8): 1438.     CrossRef
  • Rapid and sensitive detection of Karenia mikimotoi by loop-mediated isothermal amplification combined with a lateral flow dipstick
    Xiaotian Han, Ting Zhao, Tian Yan, Rencheng Yu
    Environmental Science and Pollution Research.2022; 29(17): 24696.     CrossRef
  • The Recent Original Perspectives on Nonculture-Based Bacteria Detection Methods: A Comprehensive Review
    Ece Güven, Reha Onur Azizoglu
    Foodborne Pathogens and Disease.2022; 19(7): 425.     CrossRef
  • A flap endonuclease 1-assisted universal viral nucleic acid sensing system using surface-enhanced Raman scattering
    Joowon Park, Jinyoung Kim, Chaewon Park, Jong-Woo Lim, Minjoo Yeom, Daesub Song, Eunjung Kim, Seungjoo Haam
    The Analyst.2022; 147(22): 5028.     CrossRef
  • A review of the current and emerging detection methods of marine harmful microalgae
    Fuguo Liu, Chunyun Zhang, Yuanyuan Wang, Guofu Chen
    Science of The Total Environment.2022; 815: 152913.     CrossRef
  • Loop-Mediated Isothermal Amplification for Detection of Plant Pathogens in Wheat (Triticum aestivum)
    Sandra V. Gomez-Gutierrez, Stephen B. Goodwin
    Frontiers in Plant Science.2022;[Epub]     CrossRef
  • Entwicklung von LAMP‐basierten Schnelltestverfahren für den Nachweis der Kontaminanten Kurkuma und Färberdiestel in Safran
    N. Holz, M. Fischer
    Lebensmittelchemie.2022;[Epub]     CrossRef
  • Alkaline lysis‐loop mediated isothermal amplification assay for rapid and on‐site authentication of buffalo (Bubalus bubalis) meat
    Patil S. Girish, Aparana Kumari, Pathakota Gireesh‐Babu, Nagappa S. Karabasanavar, Balamanikandan Raja, Chitimalla Ramakrishna, Sukhadeo B. Barbuddhe
    Journal of Food Safety.2022;[Epub]     CrossRef
  • Tools and Techniques for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2)/COVID-19 Detection
    Seyed Hamid Safiabadi Tali, Jason J. LeBlanc, Zubi Sadiq, Oyejide Damilola Oyewunmi, Carolina Camargo, Bahareh Nikpour, Narges Armanfard, Selena M. Sagan, Sana Jahanshahi-Anbuhi
    Clinical Microbiology Reviews.2021;[Epub]     CrossRef
  • Rapid visualization and detection of Staphylococcus aureus based on loop-mediated isothermal amplification
    Chuan Wu, Yuanyuan Zeng, Yang He
    World Journal of Microbiology and Biotechnology.2021;[Epub]     CrossRef
  • Loop-Mediated Isothermal Amplification (LAMP) as a Promising Point-of-Care Diagnostic Strategy in Avian Virus Research
    Faiz Padzil, Abdul Razak Mariatulqabtiah, Wen Siang Tan, Kok Lian Ho, Nurulfiza Mat Isa, Han Yih Lau, Jalila Abu, Kuo-Pin Chuang
    Animals.2021; 12(1): 76.     CrossRef
  • Rapid and Visual Detection of Vibrio parahaemolyticus in Aquatic Foods Using blaCARB-17 Gene-Based Loop-Mediated Isothermal Amplification with Lateral Flow Dipstick (LAMP-LFD)
    Yuan-qing Hu, Xian-hui Huang, Li-qing Guo, Zi-chen Shen, Lin-xue LV, Feng-xia Li, Zan-hu Zhou, Dan-feng Zhang
    Journal of Microbiology and Biotechnology.2021; 31(12): 1672.     CrossRef
  • Using loop-mediated isothermal amplification for visual detection of porcine parvovirus 7
    Yong Wang, Da Zhang, Caixia Bai, Menglin Li, Xiaolu Liu, Mengling Peng, Pei Sun, Yongdong Li
    3 Biotech.2021;[Epub]     CrossRef
  • Rapid and Specific Detection of the Poplar Black Spot Disease Caused by Marssonina brunnea Using Loop-Mediated Isothermal Amplification Assay
    Qin Xiong, Linlin Zhang, Xinyue Zheng, Yulin Qian, Yaxin Zhang, Lijuan Zhao, Qiang Cheng
    Plants.2021; 10(2): 253.     CrossRef
  • LAMP in Neglected Tropical Diseases: A Focus on Parasites
    Juan García-Bernalt Diego, Pedro Fernández-Soto, Antonio Muro
    Diagnostics.2021; 11(3): 521.     CrossRef
  • Recent innovations in cost-effective polymer and paper hybrid microfluidic devices
    Wan Zhou, Maowei Dou, Sanjay S. Timilsina, Feng Xu, XiuJun Li
    Lab on a Chip.2021; 21(14): 2658.     CrossRef
  • Biology, Taxonomy, and Management of the Root-Knot Nematode (Meloidogyne incognita) in Sweet Potato
    Gebissa Yigezu Wendimu, Jiban Shrestha
    Advances in Agriculture.2021; 2021: 1.     CrossRef
  • Development and evaluation of a loop-mediated isothermal amplification assay for clinical diagnosis of respiratory human adenoviruses emergent in China
    Lei Hong, Jingyuan Li, Junping Lv, Siqi Chao, Yaqing Xu, Dayang Zou, Junjie Du, Binan Lu, Zongran Pang, Wenfeng Li, Wei Liu, Yuehua Ke, Shuxun Hou
    Diagnostic Microbiology and Infectious Disease.2021; 101(1): 115401.     CrossRef
  • Rapid and simple colorimetric loop-mediated isothermal amplification (LAMP) assay for the detection of Bovine alphaherpesvirus 1
    Deborah Peltzer, Kurt Tobler, Cornel Fraefel, Madeleine Maley, Claudia Bachofen
    Journal of Virological Methods.2021; 289: 114041.     CrossRef
  • Real-time isothermal DNA amplification monitoring in picoliter volumes using an optical fiber sensor
    Monika Janik, Seyed Vahid Hamidi, Marcin Koba, Jonathan Perreault, Ryan Walsh, Wojtek J. Bock, Mateusz Śmietana
    Lab on a Chip.2021; 21(2): 397.     CrossRef
  • Functionalized Co2FeAl Nanoparticles for Detection of SARS CoV-2 Based on Reverse Transcriptase Loop-Mediated Isothermal Amplification
    Ujjwal Ranjan Dahiya, Guru Dutt Gupt, Rajendra S. Dhaka, Dinesh Kalyanasundaram
    ACS Applied Nano Materials.2021; 4(6): 5871.     CrossRef
  • An innovative and user-friendly smartphone-assisted molecular diagnostic approach for rapid detection of canine vector-borne diseases
    Archana Upadhyay, Raza Muhammad Waleed, Jinhua Wang, Jianguo Zhao, Qingfeng Guan, Chenghong Liao, Qian Han
    Parasitology Research.2021; 120(5): 1799.     CrossRef
  • Rapid diagnosis of Leishmania infection with a portable loop-mediated isothermal amplification device
    Madhu Puri, Harsimran Kaur Brar, Nimisha Mittal, Evanka Madan, Rajesh Srinivasan, Kapil Rawat, Srija Moulik, Mitali Chatterjee, Sai Siva Gorthi, Rohini Muthuswami, Rentala Madhubala
    Journal of Biosciences.2021;[Epub]     CrossRef
  • The Mbam drainage system and onchocerciasis transmission post ivermectin mass drug administration (MDA) campaign, Cameroon
    Raphael Awah Abong, Glory Ngongeh Amambo, Ali Ahamat Hamid, Belinda Agbor Enow, Amuam Andrew Beng, Franck Noel Nietcho, Theobald Mue Nji, Abdel Jelil Njouendou, Manuel Ritter, Mathias Eyong Esum, Kebede Deribe, Jerome Fru Cho, Fanny Fri Fombad, Peter Ivo
    PLOS Neglected Tropical Diseases.2021; 15(1): e0008926.     CrossRef
  • Molecular detection of fungal pathogens and induction of phytoimmunity using bioinoculants
    B. N. Chakraborty, U. Chakraborty
    Indian Phytopathology.2021; 74(2): 307.     CrossRef
  • Molecular techniques for the genomic viral RNA detection of West Nile, Dengue, Zika and Chikungunya arboviruses: a narrative review
    Antonio Mori, Elena Pomari, Michela Deiana, Francesca Perandin, Sara Caldrer, Fabio Formenti, Manuela Mistretta, Pierantonio Orza, Andrea Ragusa, Chiara Piubelli
    Expert Review of Molecular Diagnostics.2021; 21(6): 591.     CrossRef
  • A newly developed paper embedded microchip based on LAMP for rapid multiple detections of foodborne pathogens
    Mimi Zhang, Jinfeng Liu, Zhiqiang Shen, Yongxin Liu, Yang Song, Yu Liang, Zhende Li, Lingmei Nie, Yanjun Fang, Youquan Zhao
    BMC Microbiology.2021;[Epub]     CrossRef
  • Methods of Respiratory Virus Detection: Advances towards Point-of-Care for Early Intervention
    Siming Lu, Sha Lin, Hongrui Zhang, Liguo Liang, Shien Shen
    Micromachines.2021; 12(6): 697.     CrossRef
  • Systematic evaluation, verification and comparison of tuberculosis‐related non‐coding RNA diagnostic panels
    Mengyuan Lyu, Yuhui Cheng, Jian Zhou, Weelic Chong, Yili Wang, Wei Xu, Binwu Ying
    Journal of Cellular and Molecular Medicine.2021; 25(1): 184.     CrossRef
  • Molecular diagnosis of toxoplasmosis: recent advances and a look to the future
    Marie Gladys Robert, Marie-Pierre Brenier-Pinchart, Cécile Garnaud, Hélène Fricker-Hidalgo, Hervé Pelloux
    Expert Review of Anti-infective Therapy.2021; 19(12): 1529.     CrossRef
  • Efficacy of Loop-Mediated Isothermal Amplification for H. pylori Detection as Point-of-Care Testing by Noninvasive Sampling
    Amir Sohrabi, Joar Franzen, Nikolaos Tertipis, Ulrika Zagai, Wanxin Li, Zongli Zheng, Weimin Ye
    Diagnostics.2021; 11(9): 1538.     CrossRef
  • A Simple, Affordable, Rapid, Stabilized, Colorimetric, Versatile RT-LAMP Assay to Detect SARS-CoV-2
    Juan García-Bernalt Diego, Pedro Fernández-Soto, Marta Domínguez-Gil, Moncef Belhassen-García, Juan Luis Muñoz Bellido, Antonio Muro
    Diagnostics.2021; 11(3): 438.     CrossRef
  • Development and evaluation of recombinase polymerase amplification combined with lateral flow dipstick assays for co-detection of epizootic haemorrhagic disease virus and the Palyam serogroup virus
    Zhuo-ran Li, Zhen-xing Yang, Zhan-hong Li, Xiang Gao, Zhong-yan Hu, Heng Yang, De-fang Liao
    BMC Veterinary Research.2021;[Epub]     CrossRef
  • Signal Extraction, Transformation, and Magnification for Ultrasensitive and Specific Detection of Nucleic Acids
    Hongfei He, Guangcheng Luo, Jun Zhang, Ling Tang, Yan Zhou, Bei Hu, Jianyuan Dai, Zhen Huang
    Analytical Chemistry.2021; 93(30): 10611.     CrossRef
  • Single- and Two-Stage, Closed-Tube, Point-of-Care, Molecular Detection of SARS-CoV-2
    Jinzhao Song, Mohamed El-Tholoth, Yize Li, Jevon Graham-Wooten, Yining Liang, Juan Li, Weijian Li, Susan R. Weiss, Ronald G. Collman, Haim H. Bau
    Analytical Chemistry.2021; 93(38): 13063.     CrossRef
  • Virus Detection: A Review of the Current and Emerging Molecular and Immunological Methods
    A. Cassedy, A. Parle-McDermott, R. O’Kennedy
    Frontiers in Molecular Biosciences.2021;[Epub]     CrossRef
  • Rapid Detection of Pityophthorus juglandis (Blackman) (Coleoptera, Curculionidae) with the Loop-Mediated Isothermal Amplification (LAMP) Method
    Domenico Rizzo, Salvatore Moricca, Matteo Bracalini, Alessandra Benigno, Umberto Bernardo, Nicola Luchi, Daniele Da Lio, Francesco Nugnes, Giovanni Cappellini, Chiara Salemi, Santa Olga Cacciola, Tiziana Panzavolta
    Plants.2021; 10(6): 1048.     CrossRef
  • Quantitative Evaluation of the Larval Density of Sea Potato Acaudina spp. with Mitochondrial Molecular Marker
    Xiang Li, Guilin Wang, Yunfan Li, Wei Liu, Chao Lu, Yuchen Guo, Wen Huang, Jinhui Wang, Bo Dong
    Journal of Ocean University of China.2021; 20(3): 681.     CrossRef
  • Isothermal Nucleic Acid Amplification Technologies for the Detection of Equine Viral Pathogens
    Alexandra Knox, Travis Beddoe
    Animals.2021; 11(7): 2150.     CrossRef
  • Development of loop-mediated isothermal amplification (LAMP) assay using SYBR safe and gold-nanoparticle probe for detection of Leishmania in HIV patients
    Toon Ruang-areerate, Charanyarut Sukphattanaudomchoke, Thanyapit Thita, Saovanee Leelayoova, Phunlerd Piyaraj, Mathirut Mungthin, Patcharapan Suwannin, Duangporn Polpanich, Tienrat Tangchaikeeree, Kulachart Jangpatarapongsa, Kiattawee Choowongkomon, Surad
    Scientific Reports.2021;[Epub]     CrossRef
  • Isothermal amplifications – a comprehensive review on current methods
    Jörn Glökler, Theam Soon Lim, Jeunice Ida, Marcus Frohme
    Critical Reviews in Biochemistry and Molecular Biology.2021; 56(6): 543.     CrossRef
  • Application of Nanotechnology for Sensitive Detection of Low-Abundance Single-Nucleotide Variations in Genomic DNA: A Review
    Mahwash Mukhtar, Saman Sargazi, Mahmood Barani, Henning Madry, Abbas Rahdar, Magali Cucchiarini
    Nanomaterials.2021; 11(6): 1384.     CrossRef
  • Loop‐mediated isothermal amplification (LAMP): An effective molecular point‐of‐care technique for the rapid diagnosis of coronavirus SARS‐CoV‐2
    Melek Chaouch
    Reviews in Medical Virology.2021;[Epub]     CrossRef
  • Heat-enhancing aggregation of gold nanoparticles combined with loop-mediated isothermal amplification (HAG-LAMP) for Plasmodium falciparum detection
    Patcharapan Suwannin, Duangporn Polpanich, Saovanee Leelayoova, Mathirut Mungthin, Pramuan Tangboriboonrat, Abdelhamid Elaissari, Kulachart Jangpatarapongsa, Toon Ruang-areerate, Tienrat Tangchaikeeree
    Journal of Pharmaceutical and Biomedical Analysis.2021; 203: 114178.     CrossRef
  • RLEP LAMP for the laboratory confirmation of leprosy: towards a point-of-care test
    Malkin Saar, Marcus Beissner, Fatih Gültekin, Issaka Maman, Karl-Heinz Herbinger, Gisela Bretzel
    BMC Infectious Diseases.2021;[Epub]     CrossRef
  • Isothermal haRPA detection of blaCTX-M in bacterial isolates from water samples and comparison with qPCR
    Lisa Göpfert, Martin Elsner, Michael Seidel
    Analytical Methods.2021; 13(4): 552.     CrossRef
  • Diagnosing the drug resistance signature in Plasmodium falciparum: a review from contemporary methods to novel approaches
    Laxman Kumar Murmu, Arpita Arsmika Sahu, Tapan Kumar Barik
    Journal of Parasitic Diseases.2021; 45(3): 869.     CrossRef
  • Automated parasitological diagnosis in clinical microbiology laboratories
    Gema Fernández-Rivas, Belén Rivaya, Nona Romaní, Jun Hao Wang Wang, Mireya Alcaide, Lurdes Matas
    Scientific Reports.2021;[Epub]     CrossRef
  • Development of a simple and accurate molecular tool for Spodoptera frugiperda species identification using LAMP
    Juil Kim, Hwa Y Nam, Min Kwon, Hyun J Kim, Hwi J Yi, Sabine Haenniger, Melanie Unbehend, David G Heckel
    Pest Management Science.2021; 77(7): 3145.     CrossRef
  • Loop-Mediated Isothermal Amplification vs. Guobiao Standards Method for Detection of Salmonella in Yoghurt and Yoghurt-Based Drinks
    Jianwei Huo, Yan Huang, Raj Rajagopal
    International Journal of Dairy Science.2021; 16(3): 90.     CrossRef
  • Ultrastaging Using Ex Vivo Sentinel Lymph Node Mapping and One-Step Nucleic Acid Amplification (OSNA) in Gastric Cancer: Experiences of a European Center
    Bruno Märkl, Bianca Grosser, Kerstin Bauer, Dmytro Vlasenko, Gerhard Schenkirsch, Andreas Probst, Bernadette Kriening
    Cancers.2021; 13(11): 2683.     CrossRef
  • Assessing the Use of DNA Detection Platforms Combined with Passive Wind-Powered Spore Traps for Early Surveillance of Potato and Tomato Late Blight in Canada
    Yaima Arocha Rosete, Henry To, Martin Evans, Kristine White, Michael Saleh, Cheryl Trueman, Joseph Tomecek, Dennis Van Dyk, Richard C. Summerbell, James A. Scott
    Plant Disease.2021; 105(11): 3610.     CrossRef
  • Evaluation of a commercial loop-mediated isothermal amplification assay, 3MTM Molecular Detection Assay 2 – Campylobacter, for the detection of Campylobacter from poultry matrices
    R. Rajagopal, C. A. Barnes, J. M. David, J. Goseland, J. Goseland
    British Poultry Science.2021; 62(3): 404.     CrossRef
  • Honey bee sHSP are responsive to diverse proteostatic stresses and potentially promising biomarkers of honey bee stress
    Samantha R. Shih, Dunay M. Bach, Nicole C. Rondeau, Jessica Sam, Natalie L. Lovinger, Allison J. Lopatkin, Jonathan W. Snow
    Scientific Reports.2021;[Epub]     CrossRef
  • WarmStart colorimetric RT‐LAMP for the rapid, sensitive and specific detection of Enteroviruses A–D targeting the 5′UTR region
    M. Daskou, T.G. Dimitriou, D.S. Alexopoulou, D. Tsakogiannis, G.D. Amoutzias, D. Mossialos, Z. Kyriakopoulou, P. Markoulatos
    Journal of Applied Microbiology.2021; 130(1): 292.     CrossRef
  • Viral Respiratory Infections: New Tools for a Rapid Diagnosis
    Luna Colagrossi, Giordana Mattana, Livia Piccioni, Valeria Cento, Carlo Federico Perno
    Seminars in Respiratory and Critical Care Medicine.2021; 42(06): 747.     CrossRef
  • Total microfluidic platform strategy for liquid biopsy
    Hoyoon Lee, Wonhwi Na, Sehyun Shin
    Journal of Cellular Biotechnology.2021; 6(2): 113.     CrossRef
  • Virus recognition with terahertz radiation: drawbacks and potentialities
    Marta Di Fabrizio, Stefano Lupi, Annalisa D’Arco
    Journal of Physics: Photonics.2021; 3(3): 032001.     CrossRef
  • CRISPR technology incorporating amplification strategies: molecular assays for nucleic acids, proteins, and small molecules
    Wei Feng, Ashley M. Newbigging, Jeffrey Tao, Yiren Cao, Hanyong Peng, Connie Le, Jinjun Wu, Bo Pang, Juan Li, D. Lorne Tyrrell, Hongquan Zhang, X. Chris Le
    Chemical Science.2021; 12(13): 4683.     CrossRef
  • Utilizing loop‐mediated isothermal amplification to detect the presence of Escherichia coli: An inquiry‐driven undergraduate laboratory module
    Brandon G. Roy, Eric Ryndock, Courtney M. Lappas
    Biochemistry and Molecular Biology Education.2021; 49(3): 475.     CrossRef
  • A colorimetric IsoPCR for the rapid and sensitive visual detection of high-risk HPV16 in clinical samples with hydroxynaphthol blue
    M. Daskou, D. Tsakogiannis, D.S. Alexopoulou, T.G Dimitriou, D. Mossialos, G.D Amoutzias, C. Kottaridi, P. Markoulatos
    Journal of Virological Methods.2021; 290: 114072.     CrossRef
  • Hand-Powered Microfluidics for Parallel Droplet Digital Loop-Mediated Isothermal Amplification Assays
    Hao Yuan, Jingxuan Tian, Youchuang Chao, Yuh-Shiuan Chien, Ren-Hao Luo, Jun-Yu Guo, Shanshan Li, Yi-Ju Chou, Ho Cheung Shum, Chien-Fu Chen
    ACS Sensors.2021; 6(8): 2868.     CrossRef
  • Loop‐mediated isothermal amplification for the detection of SARS‐CoV‐2 in saliva
    Monika Janíková, Július Hodosy, Peter Boor, Boris Klempa, Peter Celec
    Microbial Biotechnology.2021; 14(1): 307.     CrossRef
  • Electrogenerated Chemiluminescence Biosensor Based on Functionalized Two-Dimensional Metal–Organic Frameworks for Bacterial Detection and Antimicrobial Susceptibility Assays
    Lina Sun, Yu Chen, Yuhong Duan, Fen Ma
    ACS Applied Materials & Interfaces.2021; 13(32): 38923.     CrossRef
  • Nucleic Acid-Based Diagnostic Tests for the Detection SARS-CoV-2: An Update
    Choo Yee Yu, Kok Gan Chan, Chan Yean Yean, Geik Yong Ang
    Diagnostics.2021; 11(1): 53.     CrossRef
  • Use of some cost-effective technologies for a routine clinical pathology laboratory
    Mercedes Vázquez, Laura Anfossi, Hadar Ben-Yoav, Lorena Diéguez, Thomas Karopka, Bartolomeo Della Ventura, Sara Abalde-Cela, Antonio Minopoli, Fabio Di Nardo, Vikas Kumar Shukla, Alexandra Teixeira, Asta Tvarijonaviciute, Lorena Franco-Martínez
    Lab on a Chip.2021; 21(22): 4330.     CrossRef
  • Microfluidic devices for multiplexed detection of foodborne pathogens
    Xiaoying Han, Yuanhui Liu, Juxin Yin, Min Yue, Ying Mu
    Food Research International.2021; 143: 110246.     CrossRef
  • Rapid and Sensitive Detection of the Colistin Resistance Gene mcr-3 by Loop-Mediated Isothermal Amplification and Visual Inspection
    Zhihai Liu, Changmei Guo, Yaru Zhang, Li Zhao, Zhihui Hao
    Microbial Drug Resistance.2021; 27(10): 1328.     CrossRef
  • Primers and visualization of LAMP: A rapid molecular identification method for Liposcelis entomophila (Enderlein) (Psocodea: Liposcelididae)
    Lingyu Zeng, Yun Su, Vaclav Stejskal, George Opit, Radek Aulicky, Zhihong Li
    Journal of Stored Products Research.2021; 93: 101855.     CrossRef
  • Comparative evaluation of lateral flow immunoassays, LAMP, and quantitative PCR for diagnosis of fire blight in apple orchards
    Jugpreet Singh, Della Cobb-Smith, Elizabeth Higgins, Awais Khan
    Journal of Plant Pathology.2021; 103(S1): 131.     CrossRef
  • Rapid detection ofmcyGgene of microcystins producing cyanobacteria in water samples by recombinase polymerase amplification combined with lateral flow strips
    Jingjing Li, Mingbao Feng, Xin Yu
    Journal of Water and Health.2021; 19(6): 907.     CrossRef
  • Real-time fluorometric and end-point colorimetric isothermal assays for detection of equine pathogens C. psittaci and equine herpes virus 1: validation, comparison and application at the point of care
    Martina Jelocnik, Sharon Nyari, Susan Anstey, Nicole Playford, Tamieka A. Fraser, Keith Mitchell, Anna Blishen, Nina M. Pollak, Joan Carrick, Catherine Chicken, Cheryl Jenkins
    BMC Veterinary Research.2021;[Epub]     CrossRef
  • Rapid and selective detection of macrocyclic trichothecene producing Stachybotrys chartarum strains by loop-mediated isothermal amplification (LAMP)
    Johannes Köck, Christoph Gottschalk, Sebastian Ulrich, Karin Schwaiger, Manfred Gareis, Ludwig Niessen
    Analytical and Bioanalytical Chemistry.2021; 413(19): 4801.     CrossRef
  • Visual and Rapid Diagnosis of Neisseria gonorrhoeae Using Loop-Mediated Isothermal Amplification Combined With a Polymer Nanoparticle–Based Biosensor in Clinical Application
    Xu Chen, Qingxue Zhou, Xueli Wu, Shuoshi Wang, Rui Liu, Shilei Dong, Wei Yuan
    Frontiers in Molecular Biosciences.2021;[Epub]     CrossRef
  • Electrochemical Strategy for Low-Cost Viral Detection
    Marjon Zamani, James M. Robson, Andy Fan, Michael S. Bono, Ariel L. Furst, Catherine M. Klapperich
    ACS Central Science.2021; 7(6): 963.     CrossRef
  • Development of a loop-mediated isothermal amplification (LAMP) assay for the identification of the invasive wood borer Aromia bungii (Coleoptera: Cerambycidae) from frass
    Domenico Rizzo, Nicola Luchi, Daniele Da Lio, Linda Bartolini, Francesco Nugnes, Giovanni Cappellini, Tommaso Bruscoli, Chiara Salemi, Raffaele V. Griffo, Antonio P. Garonna, Elisabetta Rossi
    3 Biotech.2021;[Epub]     CrossRef
  • Development of Three Molecular Diagnostic Tools for the Identification of the False Codling Moth (Lepidoptera: Tortricidae)
    D Rizzo, D Da Lio, L Bartolini, G Cappellini, T Bruscoli, C Salemi, A Aronadio, D Del Nista, F Pennacchio, N Boersma, E Rossi, P Sacchetti, Brian Rector
    Journal of Economic Entomology.2021; 114(4): 1796.     CrossRef
  • Use of LAMP for Assessing Botrytis cinerea Colonization of Bunch Trash and Latent Infection of Berries in Grapevines
    Melissa Si Ammour, Eleonora Castaldo, Giorgia Fedele, Vittorio Rossi
    Plants.2020; 9(11): 1538.     CrossRef
  • Rapid detection of two emerging viruses associated with necrotic symptoms in Areca catechu L. by reverse transcription loop-mediated isothermal amplification (RT-LAMP)
    Guangyuan Zhao, Wentao Shen, Decai Tuo, Hongguang Cui, Pu Yan, Qinghua Tang, Guopeng Zhu, Xiaoying Li, Peng Zhou, Yindong Zhang
    Journal of Virological Methods.2020; 281: 113795.     CrossRef
  • Rapid differentiation of PEDV wild-type strains and classical attenuated vaccine strains by fluorescent probe-based reverse transcription recombinase polymerase amplification assay
    Zhilin Wang, Xuerui Li, Youjun Shang, Jinyan Wu, Zhen Dong, Xiaoan Cao, Yongsheng Liu, Xi Lan
    BMC Veterinary Research.2020;[Epub]     CrossRef
  • Molecular and Immunological Diagnostic Techniques of Medical Viruses
    Daniel Hussien Reta, Tesfaye Sisay Tessema, Addis Simachew Ashenef, Adey Feleke Desta, Wajana Lako Labisso, Solomon Tebeje Gizaw, Solomon Mequanente Abay, Daniel Seifu Melka, Fisseha Alemu Reta
    International Journal of Microbiology.2020; 2020: 1.     CrossRef
  • Molecular Approaches for Low-Cost Point-of-Care Pathogen Detection in Agriculture and Forestry
    Paolo Baldi, Nicola La Porta
    Frontiers in Plant Science.2020;[Epub]     CrossRef
  • Loop-Mediated Isothermal Amplification as Point-of-Care Diagnosis for Neglected Parasitic Infections
    Catalina Avendaño, Manuel Alfonso Patarroyo
    International Journal of Molecular Sciences.2020; 21(21): 7981.     CrossRef
  • COVID‐19 Clinical Diagnostics and Testing Technology
    Cindy H. Chau, Jonathan D. Strope, William D. Figg
    Pharmacotherapy: The Journal of Human Pharmacology and Drug Therapy.2020; 40(8): 857.     CrossRef
  • Rapid visualized isothermal nucleic acid testing of Vibrio parahaemolyticus by polymerase spiral reaction
    Shiyu He, Hongbo Jang, Chao Zhao, Kun Xu, Juan Wang, Bo Pang, Xiaoxue Si, Minghua Jin, Xiuling Song, Juan Li
    Analytical and Bioanalytical Chemistry.2020; 412(1): 93.     CrossRef
  • Highly sensitive and fast Legionella spp. in situ detection based on a loop mediated isothermal amplification technique combined to an electrochemical transduction system
    Garbiñe Olabarria, Unai Eletxigerra, Isabel Rodriguez, Ainhoa Bilbao, Jesus Berganza, Santos Merino
    Talanta.2020; 217: 121061.     CrossRef
  • LAMP-LFD Based on Isothermal Amplification of Multicopy Gene ORF160b: Applicability for Highly Sensitive Low-Tech Screening of Allergenic Soybean (Glycine max) in Food
    Stefanie M. Allgöwer, Chris A. Hartmann, Clarissa Lipinski, Vera Mahler, Stefanie Randow, Elke Völker, Thomas Holzhauser
    Foods.2020; 9(12): 1741.     CrossRef
  • Safety, Quality and Analytical Authentication of ḥalāl Meat Products, with Particular Emphasis on Salami: A Review
    Maria Martuscelli, Annalisa Serio, Oriana Capezio, Dino Mastrocola
    Foods.2020; 9(8): 1111.     CrossRef
  • Diagnostic Values of Multiplex Loop-Mediated Isothermal Amplification and Multiplex Polymerase Chain Reaction for Detection of Methicillin-Resistant Staphylococcus aureus
    Sara Kashani, Amir Houshang Alvandi, Ramin Abiri
    Jundishapur Journal of Microbiology.2020;[Epub]     CrossRef
  • Graphene oxide-based molecular diagnostic biosensor for simultaneous detection of Zika and dengue viruses
    Ji-Seon Lee, Jungho Kim, Hojeong Shin, Dal-Hee Min
    2D Materials.2020; 7(4): 044001.     CrossRef
  • Sowing seeds for the future: The need for on-site plant diagnostics
    Arabelle Cassedy, Ewen Mullins, Richard O'Kennedy
    Biotechnology Advances.2020; 39: 107358.     CrossRef
  • Comparison of Loop-Mediated Isothermal Amplification, Microscopy, Culture, and PCR for Diagnosis of Pulmonary Tuberculosis
    Benjawan Phetsuksiri, Janisara Rudeeaneksin, Sopa Srisungngam, Supranee Bunchoo, Wiphat Klayut, Chie Nakajima, Shigeyugi Hamada, Yasuhiko Suzuki
    Japanese Journal of Infectious Diseases.2020; 73(4): 272.     CrossRef
  • Development and Evaluation of a Loop-mediated Isothermal Amplification Assay for the Rapid Detection and Identification of Pectobacterium carotovorum on Celery in the Field
    Yanxia Shi, Zhiwen Jin, Xianglong Meng, Lixue Wang, Xuewen Xie, Ali Chai, Baoju Li
    Horticultural Plant Journal.2020; 6(5): 313.     CrossRef
  • Combining the Sensitivity of LAMP and Simplicity of Primer Extension via a DNA-Modified Nucleotide
    Moritz Welter, Andreas Marx
    Chemistry.2020; 2(2): 490.     CrossRef
  • Application of loop-mediated isothermal amplification combined with lateral flow dipstick to rapid and sensitive detection of Alexandrium catenella
    Liang Wang, Guofu Chen, Chunyun Zhang, Yuanyuan Wang, Rui Sun
    Environmental Science and Pollution Research.2020; 27(4): 4246.     CrossRef
  • The Development of Highly Specific and Sensitive Primers for the Detection of Potentially Allergenic Soybean (Glycine max) Using Loop-Mediated Isothermal Amplification Combined with Lateral Flow Dipstick (LAMP-LFD)
    Stefanie M. Allgöwer, Chris A. Hartmann, Thomas Holzhauser
    Foods.2020; 9(4): 423.     CrossRef
  • Multiplex Digital MicroRNA Detection Using Cross-Inhibitory DNA Circuits
    Yannick Rondelez, Guillaume Gines
    ACS Sensors.2020; 5(8): 2430.     CrossRef
  • Target-Catalyzed Assembly of Pyrene-Labeled Hairpins for Exponentially Amplified Biosensing
    Zhengqing He, Jie Wu, Bin Qiao, Hua Pei, Qianfeng Xia, Qiang Wu, Huangxian Ju
    ACS Applied Bio Materials.2020; 3(8): 5342.     CrossRef
  • Critical review of methods for isothermal amplification of nucleic acids for environmental analysis
    Dana M. Nieuwkerk, Asja Korajkic, Erika L. Valdespino, Michael P. Herrmann, Valerie J. Harwood
    Journal of Microbiological Methods.2020; 179: 106099.     CrossRef
  • A Loop-Mediated Isothermal Amplification Assay for the Detection of Treponema pallidum subsp. pertenue
    Laud Anthony W. Basing, Shirley Victoria Simpson, Yaw Adu-Sarkodie, Jacqueline C. Linnes
    The American Journal of Tropical Medicine and Hygiene.2020; 103(1): 253.     CrossRef
  • Visual detection of high-risk HPV16 and HPV18 based on loop-mediated isothermal amplification
    Zhaoxuan Fan, Xiao Feng, Weifei Zhang, Nan Li, Xueji Zhang, Jin-Ming Lin
    Talanta.2020; 217: 121015.     CrossRef
  • A real-time isothermal amplification based portable microfluidic system for simple and reliable detection of Vibrio splendidus
    Runtao Zhong, Shilin Liu, Xiaohui Wang, Guohao Zhang, Ning Gong, Mengyu Wang, Yeqing Sun
    Analytical Methods.2020; 12(23): 2985.     CrossRef
  • Nucleic acid detection aboard the International Space Station by colorimetric loop‐mediated isothermal amplification (LAMP)
    Julian Rubinfien, Kutay D. Atabay, Nicole M. Nichols, Nathan A. Tanner, John A. Pezza, Michelle M. Gray, Brandon M. Wagner, Jayme N. Poppin, Jordan T. Aken, Emily J. Gleason, Kevin D. Foley, David Scott Copeland, Sebastian Kraves, Ezequiel Alvarez Saavedr
    FASEB BioAdvances.2020; 2(3): 160.     CrossRef
  • Dynamic Laser Speckle Imaging Meets Machine Learning to Enable Rapid Antibacterial Susceptibility Testing (DyRAST)
    Keren Zhou, Chen Zhou, Anjali Sapre, Jared Henry Pavlock, Ashley Weaver, Ritvik Muralidharan, Josh Noble, Taejung Chung, Jasna Kovac, Zhiwen Liu, Aida Ebrahimi
    ACS Sensors.2020; 5(10): 3140.     CrossRef
  • Detection of human papillomavirus in oropharyngeal squamous cell carcinoma
    Fatin Hazwani Fauzi, Nurul Izzati Hamzan, Nurhayu Ab Rahman, Siti Suraiya, Suharni Mohamad
    Journal of Zhejiang University-SCIENCE B.2020; 21(12): 961.     CrossRef
  • Differential susceptibility of Onchocerca volvulus microfilaria to ivermectin in two areas of contrasting history of mass drug administration in Cameroon: relevance of microscopy and molecular techniques for the monitoring of skin microfilarial repopulati
    Raphael Awah Abong, Glory N. Amambo, Patrick W. Chounna Ndongmo, Abdel Jelil Njouendou, Manuel Ritter, Amuam Andrew Beng, Mathias Eyong Esum, Kebede Deribe, Jerome Fru-Cho, Fanny F. Fombad, Theobald Mue Nji, Peter Ivo Enyong, Catherine B. Poole, Kenneth P
    BMC Infectious Diseases.2020;[Epub]     CrossRef
  • A LAMP at the end of the tunnel: A rapid, field deployable assay for the kauri dieback pathogen, Phytophthora agathidicida
    Richard C. Winkworth, Briana C. W. Nelson, Stanley E. Bellgard, Chantal M. Probst, Patricia A. McLenachan, Peter J. Lockhart, Ruslan Kalendar
    PLOS ONE.2020; 15(1): e0224007.     CrossRef
  • Molecular Markers for Detecting Schistosoma Species by Loop-Mediated Isothermal Amplification
    Pedro Fernández-Soto, Catalina Avendaño, Anna Sala-Vizcaíno, Beatriz Crego-Vicente, Begoña Febrer-Sendra, Juan García-Bernalt Diego, Ana Oleaga, Julio López-Abán, Belén Vicente, Manuel A. Patarroyo, Antonio Muro
    Disease Markers.2020; 2020: 1.     CrossRef
  • Molecular detection of Fusarium graminearum causing head blight of wheat by loop mediated isothermal amplification (LAMP) assay
    S. Gupta, M. S. Saharan, M. S. Gurjar, J. Singh, B. M. Bashyal, R. Aggarwal
    Indian Phytopathology.2020; 73(4): 667.     CrossRef
  • Phytophthora agathidicida: research progress, cultural perspectives and knowledge gaps in the control and management of kauri dieback in New Zealand
    R. E. Bradshaw, S. E. Bellgard, A. Black, B. R. Burns, M. L. Gerth, R. L. McDougal, P. M. Scott, N. W. Waipara, B. S. Weir, N. M. Williams, R. C. Winkworth, T. Ashcroft, E. L. Bradley, P. P. Dijkwel, Y. Guo, R. F. Lacey, C. H. Mesarich, P. Panda, I. J. Ho
    Plant Pathology.2020; 69(1): 3.     CrossRef
  • Development of a LAMP method for detecting the N75S mutant in SDHI-resistant Corynespora cassiicola
    Jiamei Zhu, Lingyan Zhang, Hong Li, Yangyang Gao, Wei Mu, Feng Liu
    Analytical Biochemistry.2020; 597: 113687.     CrossRef
  • Comparative evaluation of loop-mediated isothermal amplification (LAMP) vs qPCR for detection of Toxoplasma gondii oocysts DNA in mussels
    Loïc Durand, Stéphanie La Carbona, Alain Geffard, Alessia Possenti, Jitender P. Dubey, Marco Lalle
    Experimental Parasitology.2020; 208: 107809.     CrossRef
  • On-Site Detection of Tissues of Buffalo Origin by Loop-Mediated Isothermal Amplification (LAMP) Assay Targeting Mitochondrial Gene Sequences
    Sarita Kumari, R. R. Kumar, S. K. Mendiratta, Deepak Kumar, Arun Kumar, Dhananjay Kumar, Preeti Rana, Jyoti Jawla
    Food Analytical Methods.2020; 13(5): 1060.     CrossRef
  • Rapid detection of pork using alkaline lysis- Loop Mediated Isothermal Amplification (AL-LAMP) technique
    P.S. Girish, S.B. Barbuddhe, Aparana Kumari, Deepak B. Rawool, Nagappa S. Karabasanavar, M. Muthukumar, S. Vaithiyanathan
    Food Control.2020; 110: 107015.     CrossRef
  • Development of a reverse transcription loop-mediated isothermal amplification assay (RT-LAMP) that detects enteroviruses by targeting the highly conserved 5′-UTR region
    M. Daskou, T. G. Dimitriou, G. Kouklamani-Giannouli, M. Nikolaidis, D. Mossialos, G. D. Amoutzias, P. Markoulatos
    Virus Genes.2020; 56(2): 194.     CrossRef
  • Cercospora beticola: The intoxicating lifestyle of the leaf spot pathogen of sugar beet
    Lorena I. Rangel, Rebecca E. Spanner, Malaika K. Ebert, Sarah J. Pethybridge, Eva H. Stukenbrock, Ronnie de Jonge, Gary A. Secor, Melvin D. Bolton
    Molecular Plant Pathology.2020; 21(8): 1020.     CrossRef
  • Molecular Identification of Anoplophora glabripennis (Coleoptera: Cerambycidae) From Frass by Loop-Mediated Isothermal Amplification
    Domenico Rizzo, Andrea Taddei, Daniele Da Lio, Tommaso Bruscoli, Giovanni Cappellini, Linda Bartolini, Chiara Salemi, Nicola Luchi, Fabrizio Pennacchio, Elisabetta Rossi, Brian Rector
    Journal of Economic Entomology.2020; 113(6): 2911.     CrossRef
  • Droplet and Microchamber‐Based Digital Loop‐Mediated Isothermal Amplification (dLAMP)
    Hao Yuan, Youchuang Chao, Ho Cheung Shum
    Small.2020;[Epub]     CrossRef
  • Molecular Diagnosis of COVID-19: Challenges and Research Needs
    Wei Feng, Ashley M. Newbigging, Connie Le, Bo Pang, Hanyong Peng, Yiren Cao, Jinjun Wu, Ghulam Abbas, Jin Song, Dian-Bing Wang, Mengmeng Cui, Jeffrey Tao, D. Lorne Tyrrell, Xian-En Zhang, Hongquan Zhang, X. Chris Le
    Analytical Chemistry.2020; 92(15): 10196.     CrossRef
  • Prospects For the Use of Loop Isothermal Amplification in the Diagnosis of Particularly Dangerous Infectious Diseases Caused by the Viruses of the Pathogenicity Group I
    M. Yu. Kartashov, E. V. Chub, T. P. Mikryukova, E. V. Naidenova, V. A. Ternovoy
    Problems of Particularly Dangerous Infections.2020; (2): 22.     CrossRef
  • Effect of metal ions on isothermal amplification with Bst exo- DNA polymerase
    Ravil R. Garafutdinov, Aidar R. Gilvanov, Olga Yu. Kupova, Assol R. Sakhabutdinova
    International Journal of Biological Macromolecules.2020; 161: 1447.     CrossRef
  • Advances in HIV diagnosis and monitoring
    Md Alamgir Kabir, Hussein Zilouchian, Massimo Caputi, Waseem Asghar
    Critical Reviews in Biotechnology.2020; 40(5): 623.     CrossRef
  • A loop-mediated isothermal amplification (LAMP) assay for the consensus detection of human pathogenic Campylobacter species
    Uma S. Babu, Lisa M. Harrison, Mark K. Mammel, Elmer C. Bigley, Kelli L. Hiett, Kannan V. Balan
    Journal of Microbiological Methods.2020; 176: 106009.     CrossRef
  • The Colorimetric Isothermal Multiple-Self-Matching-Initiated Amplification Using Cresol Red for Rapid and Sensitive Detection of Porcine Circovirus 3
    Hongchao Gou, Zhibiao Bian, Rujian Cai, Zhiyong Jiang, Shuai Song, Yan Li, Pinpin Chu, Dongxia Yang, Ying-An Zang, Chunling Li
    Frontiers in Veterinary Science.2020;[Epub]     CrossRef
  • iso-μmGene: an isothermal amplification-based portable microfluidic system for simple, reliable and flexibly multiplexed genetic identification and quantification
    Runtao Zhong, Shilin Liu, Guohao Zhang, Mengyu Wang, Yeqing Sun
    The Analyst.2020; 145(13): 4627.     CrossRef
  • Electrochemical Detection of Genomic DNA Utilizing Recombinase Polymerase Amplification and Stem-Loop Probe
    Shirin Khaliliazar, Liangqi Ouyang, Andrew Piper, Georgios Chondrogiannis, Martin Hanze, Anna Herland, Mahiar Max Hamedi
    ACS Omega.2020; 5(21): 12103.     CrossRef
  • Use of real-time multiplex PCR, malaria rapid diagnostic test and microscopy to investigate the prevalence of Plasmodium species among febrile hospital patients in Sierra Leone
    Tomasz A. Leski, Chris Rowe Taitt, Abdulai G. Swaray, Umaru Bangura, Nathanael D. Reynolds, Andrew Holtz, Chadwick Yasuda, Joseph Lahai, Joseph M. Lamin, Victoria Baio, Kathryn H. Jacobsen, Rashid Ansumana, David A. Stenger
    Malaria Journal.2020;[Epub]     CrossRef
  • Rapid detection of antibiotic resistance genes in lactic acid bacteria using PMMA-based microreactor arrays
    Zengjun Jin, Guotao Ding, Guoxing Yang, Guiying Li, Wei Zhang, Lixin Yang, Weihao Li
    Applied Microbiology and Biotechnology.2020; 104(14): 6375.     CrossRef
  • Variplex™ test system fails to reliably detect SARS-CoV-2 directly from respiratory samples without RNA extraction
    Florian Eckel, Franziska Küsters, Bernhard Drossel, Markus Konert, Hans Mattes, Stefan Schopf
    European Journal of Clinical Microbiology & Infectious Diseases.2020; 39(12): 2373.     CrossRef
  • Rapid detection of foodborne bacterial pathogens using visual high‐throughput microfluidic chip
    Zengjun Jin, Guotao Ding, Guiying Li, Guoxing Yang, Yonghong Han, Ning Hao, Jian Deng, Yan Zhang, Wei Zhang, Weihao Li
    Journal of Chemical Technology & Biotechnology.2020; 95(5): 1460.     CrossRef
  • Development of a Species Diagnostic Molecular Tool for an Invasive Pest, Mythimna loreyi, Using LAMP
    Hwa Yeun Nam, Min Kwon, Hyun Ju Kim, Juil Kim
    Insects.2020; 11(11): 817.     CrossRef
  • A Diagnostic Loop-Mediated Isothermal Amplification Method to Distinguish Helicoverpa armigera (Lepidoptera: Noctuidae) From Other Related Species in the New World
    Takayuki Amano, Masashi Nomura, Jianxiu Yao
    Journal of Insect Science.2020;[Epub]     CrossRef
  • Simplified closed tube loop mediated isothermal amplification (LAMP) assay for visual diagnosis of Leishmania infection
    Charanyarut Sukphattanaudomchoke, Suradej Siripattanapipong, Thanyapit Thita, Saovanee Leelayoova, Phunlerd Piyaraj, Mathirut Mungthin, Toon Ruang-areerate
    Acta Tropica.2020; 212: 105651.     CrossRef
  • Α 2-stage, nested-like nucleic acid amplification method (IsoPCR) for the highly sensitive detection of HPV16 and HPV18 DNA
    M. Daskou, D. Tsakogiannis, T.G. Dimitriou, M. Manali, C. Apti, G.D. Amoutzias, D. Mossialos, C. Kottaridi, P. Markoulatos
    Molecular and Cellular Probes.2019; 45: 1.     CrossRef
  • Development of a loop-mediated isothermal amplification (LAMP) assay for the detection of Anaplasma marginale
    Rodrigo Giglioti, César Cristiano Bassetto, Cintia Hiromi Okino, Henrique Nunes de Oliveira, Márcia Cristina de Sena Oliveira
    Experimental and Applied Acarology.2019; 77(1): 65.     CrossRef
  • Development of Three Loop-Mediated Isothermal Amplification (LAMP) Assays for the Rapid Detection of Calonectria ilicicola, Dactylonectria macrodidyma, and the Dactylonectria Genus in Avocado Roots
    Louisamarie E. Parkinson, Duy P. Le, Elizabeth K. Dann
    Plant Disease.2019; 103(8): 1865.     CrossRef
  • Detection of Vibrio anguillarum and Vibrio alginolyticus by Singleplex and Duplex Loop-Mediated Isothermal Amplification (LAMP) Assays Targeted to groEL and fklB Genes
    Mahbubul Pratik Siddique, Won Je Jang, Jong Min Lee, Md Tawheed Hasan, Chang-Hoon Kim, In-Soo Kong
    International Microbiology.2019; 22(4): 501.     CrossRef
  • A foldable isothermal amplification microdevice for fuchsin-based colorimetric detection of multiple foodborne pathogens
    Thi Ngoc Diep Trinh, Nae Yoon Lee
    Lab on a Chip.2019; 19(8): 1397.     CrossRef
  • Rapid and semiquantitative detection of Staphylococcus epidermidis in humor samples by microfluidic platform
    Xinlian Zhang, Xiaoxu Li, Qi Liu, Shaorui Ke, Yinghong Ji, Sixiu Liu, Guodong Sui
    Sensors and Actuators B: Chemical.2019; 278: 8.     CrossRef
  • A Review on Equine Piroplasmosis: Epidemiology, Vector Ecology, Risk Factors, Host Immunity, Diagnosis and Control
    ThankGod E. Onyiche, Keisuke Suganuma, Ikuo Igarashi, Naoaki Yokoyama, Xuenan Xuan, Oriel Thekisoe
    International Journal of Environmental Research and Public Health.2019; 16(10): 1736.     CrossRef
  • Simple Visualized Detection Method of Virulence-Associated Genes of Vibrio cholerae by Loop-Mediated Isothermal Amplification
    Mengjie Xu, Huiyu Fu, Dailing Chen, Zehuai Shao, Jun Zhu, Walid Q. Alali, Lanming Chen
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Development of a reverse transcription-loop-mediated isothermal amplification (RT-LAMP) assay for the detection of porcine pegivirus
    Hao Li, Kai Li, Zhen Bi, Jun Gu, Deping Song, Dan Lei, Suoxian Luo, Dongyan Huang, Qiong Wu, Zhen Ding, Leyi Wang, Yu Ye, Yuxin Tang
    Journal of Virological Methods.2019; 270: 59.     CrossRef
  • Pathogenic Bacteria Detection Using RNA-Based Loop-Mediated Isothermal-Amplification-Assisted Nucleic Acid Amplification via Droplet Microfluidics
    Morteza Azizi, Meisam Zaferani, Soon Hon Cheong, Alireza Abbaspourrad
    ACS Sensors.2019; 4(4): 841.     CrossRef
  • Comparison of Loop-Mediated Isothermal Amplification and Real-Time PCR Assays for Detection of Strongyloides Larvae in Different Specimen Matrices
    Matthew R. Watts, Rady Kim, Vishal Ahuja, Gemma J. Robertson, Yasmin Sultana, Michael C. Wehrhahn, Richard S. Bradbury, Gwendolyn L. Gilbert, Rogan Lee, Michael J. Loeffelholz
    Journal of Clinical Microbiology.2019;[Epub]     CrossRef
  • Development of an RT-LAMP assay for the detection of Lassa viruses in southeast and south-central Nigeria
    Christelle M. Pemba, Yohei Kurosaki, Rokusuke Yoshikawa, Olamide K. Oloniniyi, Shuzo Urata, Maki Sueyoshi, Vahid R. Zadeh, Ifeanyi Nwafor, Michael O. Iroezindu, Nnenna A. Ajayi, Chinedu M. Chukwubike, Nneka M. Chika-Igwenyi, Anne C. Ndu, Damian U. Nwidi,
    Journal of Virological Methods.2019; 269: 30.     CrossRef
  • New sensitive and fast detection of Little cherry virus 1 using loop-mediated isothermal amplification (RT-LAMP)
    Rachid Tahzima, Yoika Foucart, Gertie Peusens, Tim Beliën, Sébastien Massart, Kris De Jonghe
    Journal of Virological Methods.2019; 265: 91.     CrossRef
  • A versatile loop-mediated isothermal amplification microchip platform for Streptococcus pneumoniae and Mycoplasma pneumoniae testing at the point of care
    Hua Wang, Zhan Ma, Juanxiu Qin, Zhen Shen, Qian Liu, Xiaoyin Chen, Hengliang Wang, Zhenghua An, Wu Liu, Min Li
    Biosensors and Bioelectronics.2019; 126: 373.     CrossRef
  • Development and Clinical Evaluation of Loop-Mediated Isothermal Amplification (LAMP) Assay for the Diagnosis of Human Visceral Leishmaniasis in Brazil
    Daniel Moreira de Avelar, Débora Moreira Carvalho, Ana Rabello
    BioMed Research International.2019; 2019: 1.     CrossRef
  • Demonstration of a quantitative triplex LAMP assay with an improved probe-based readout for the detection of MRSA
    Imaly A. Nanayakkara, Ian M. White
    The Analyst.2019; 144(12): 3878.     CrossRef
  • A simple method for sequencing the whole human mitochondrial genome directly from samples and its application to genetic testing
    Yue Yao, Motoi Nishimura, Kei Murayama, Naomi Kuranobu, Satomi Tojo, Minako Beppu, Takayuki Ishige, Sakae Itoga, Sachio Tsuchida, Masato Mori, Masaki Takayanagi, Masataka Yokoyama, Kazuyuki Yamagata, Yoshihito Kishita, Yasushi Okazaki, Fumio Nomura, Kazuy
    Scientific Reports.2019;[Epub]     CrossRef
  • Microfluidic-Based Nucleic Acid Amplification Systems in Microbiology
    Lena Gorgannezhad, Helen Stratton, Nam-Trung Nguyen
    Micromachines.2019; 10(6): 408.     CrossRef
  • Relative Performance of MinION (Oxford Nanopore Technologies) versus Sequel (Pacific Biosciences) Third-Generation Sequencing Instruments in Identification of Agricultural and Forest Fungal Pathogens
    Kaire Loit, Kalev Adamson, Mohammad Bahram, Rasmus Puusepp, Sten Anslan, Riinu Kiiker, Rein Drenkhan, Leho Tedersoo, Irina S. Druzhinina
    Applied and Environmental Microbiology.2019;[Epub]     CrossRef
  • Detection of helminths by loop-mediated isothermal amplification assay: a review of updated technology and future outlook
    Miao-Han Deng, Lan-Yi Zhong, Okanurak Kamolnetr, Yanin Limpanont, Zhi-Yue Lv
    Infectious Diseases of Poverty.2019;[Epub]     CrossRef
  • A Variety of Bio-nanogold in the Fabrication of Lateral Flow Biosensors for the Detection of Pathogenic Bacteria
    Nan Cheng, Zhansen Yang, Weiran Wang, Xinxian Wang, Wentao Xu, Yunbo Luo
    Current Topics in Medicinal Chemistry.2019; 19(27): 2476.     CrossRef
  • Rapid detection of tilapia lake virus using a one-step reverse transcription loop-mediated isothermal amplification assay
    Theerawut Phusantisampan, Puntanat Tattiyapong, Palita Mutrakulcharoen, Malinee Sriariyanun, Win Surachetpong
    Aquaculture.2019; 507: 35.     CrossRef
  • Loop-mediated isothermal amplification (LAMP): An advanced molecular point-of-care technique for the detection of Leishmania infection
    Chukwunonso O. Nzelu, Hirotomo Kato, Nathan C. Peters, Sima Rafati
    PLOS Neglected Tropical Diseases.2019; 13(11): e0007698.     CrossRef
  • MorphoCatcher: a multiple-alignment based web tool for target selection and designing taxon-specific primers in the loop-mediated isothermal amplification method
    Fedor V. Shirshikov, Yuri A. Pekov, Konstantin A. Miroshnikov
    PeerJ.2019; 7: e6801.     CrossRef
  • Shift of Sensitivity in Botrytis cinerea to Benzimidazole Fungicides in Strawberry Greenhouse Ascribing to the Rising-lowering of E198A Subpopulation and its Visual, On-site Monitoring by Loop-mediated Isothermal Amplification
    Y. H. Liu, S. K. Yuan, X. R. Hu, C. Q. Zhang
    Scientific Reports.2019;[Epub]     CrossRef
  • Loop‐mediated isothermal amplification (LAMP) for the identification of invasive Aedes mosquito species
    C. D. Schenkel, T. Kamber, F. Schaffner, A. Mathis, C. Silaghi
    Medical and Veterinary Entomology.2019; 33(3): 345.     CrossRef
  • qPCR and loop mediated isothermal amplification for rapid detection of Ustilago tritici
    Hanwen Yan, Jian Zhang, Dongfang Ma, Junliang Yin
    PeerJ.2019; 7: e7766.     CrossRef
  • Rapid and Accurate Diagnosis of the Respiratory Disease Pertussis on a Point-of-Care Biochip
    Maowei Dou, Natalie Macias, Feng Shen, Jennifer Dien Bard, Delfina C. Domínguez, XiuJun Li
    EClinicalMedicine.2019; 8: 72.     CrossRef
  • Measurement of microRNA with isothermal DNA amplification on fully automated immunoassay analyzers
    Makoto Komori, Ken Komiya, Takuma Shirakawa, Takamitsu J. Morikawa, Toru Yoshimura
    Analytical and Bioanalytical Chemistry.2019; 411(17): 3789.     CrossRef
  • Isothermal Amplification Methods for the SNP Genotyping
    Somayeh Heidari Sharafdarkolaee, Pooria Gill, Majid Motovali-Bashi, Fatemeh Heidari Sharafdarkolaee
    Current Molecular Medicine.2019; 19(7): 461.     CrossRef
  • Emerging ultrafast nucleic acid amplification technologies for next-generation molecular diagnostics
    Sang Hun Lee, Seung-min Park, Brian N. Kim, Oh Seok Kwon, Won-Yep Rho, Bong-Hyun Jun
    Biosensors and Bioelectronics.2019; 141: 111448.     CrossRef
  • Detection of viable but nonculturable Vibrio parahaemolyticus in shrimp samples using improved real-time PCR and real-time LAMP methods
    Xiao Cao, Lichao Zhao, Jingfeng Zhang, Xun Chen, Lei Shi, Xiang Fang, Hui Xie, Yanlei Chang, Li Wang
    Food Control.2019; 103: 145.     CrossRef
  • Detection of Potato ring rot Pathogen Clavibacter michiganensis subsp. sepedonicus by Loop-mediated isothermal amplification (LAMP) assay
    Hasan Sagcan, Neslihan Turgut Kara
    Scientific Reports.2019;[Epub]     CrossRef
  • Rapid Antimicrobial Susceptibility Testing of Patient Urine Samples Using Large Volume Free-Solution Light Scattering Microscopy
    Manni Mo, Yunze Yang, Fenni Zhang, Wenwen Jing, Rafael Iriya, John Popovich, Shaopeng Wang, Thomas Grys, Shelley E. Haydel, Nongjian Tao
    Analytical Chemistry.2019; 91(15): 10164.     CrossRef
  • EFFECTIVENESS OF THE LOOP-MEDIATED ISOTHERMAL AMPLIFICATION WITH FLUORESCENT DETECTION IN THE DIAGNOSIS OF PARVOVIRUS ENTERITIS IN CARNIVORES
    O. A. Petrusha, T. L. Chernichenko, I. A. Kofiadi, V. V. Zverev, E. B. Faizuloev
    Journal of microbiology, epidemiology and immunobiology.2019; 96(1): 90.     CrossRef
  • Loop-Mediated Isothermal Amplification (LAMP) for the Diagnosis of Zika Virus: A Review
    Severino Jefferson Ribeiro da Silva, Keith Pardee, Lindomar Pena
    Viruses.2019; 12(1): 19.     CrossRef
  • Personalized Approach as a Basis for the Future Diagnosis of Tuberculosis (Literature Review)
    P. A. Khromova, V. V. Sinkov, E. D. Savilov
    Acta Biomedica Scientifica (East Siberian Biomedical Journal).2019; 4(3): 127.     CrossRef
  • A Loop-Mediated Isothermal Amplification Integrated G-Quadruplex Molecular Beacon (LAMP-GMB) Method for the Detection of Staphylococcus aureus in Food
    Jingguo Xu, Yimin Hu, Jia Guo, Yumeng Yang, Jiarong Qiu, Xuanxuan Li, Zhihong Xin
    Food Analytical Methods.2019; 12(2): 422.     CrossRef
  • Graphene Oxide-Based Suppression of Nonspecificity in Loop-Mediated Isothermal Amplification Enabling the Sensitive Detection of Cyclooxygenase-2 mRNA in Colorectal Cancer
    Qiuyuan Lin, Xin Ye, Zhipeng Huang, Bin Yang, Xueen Fang, Hui Chen, Jilie Kong
    Analytical Chemistry.2019; 91(24): 15694.     CrossRef
  • Real-time fluorescence loop-mediated isothermal amplification assay for rapid and sensitive detection of Streptococcus gallolyticus subsp. gallolyticus associated with colorectal cancer
    Qiuyuan Lin, Xin Ye, Bin Yang, Xueen Fang, Hui Chen, Wenhao Weng, Jilie Kong
    Analytical and Bioanalytical Chemistry.2019; 411(26): 6877.     CrossRef
  • Fully integrated and slidable paper-embedded plastic microdevice for point-of-care testing of multiple foodborne pathogens
    Kieu The Loan Trinh, Thi Ngoc Diep Trinh, Nae Yoon Lee
    Biosensors and Bioelectronics.2019; 135: 120.     CrossRef
  • A novel impedimetric sensor for detecting LAMP amplicons of pathogenic DNA based on magnetic separation
    Sumaira Sharif, Yixian Wang, Zunzhong Ye, Zhen Wang, Qimin Qiu, Shengna Ying, Yibin Ying
    Sensors and Actuators B: Chemical.2019; 301: 127051.     CrossRef
  • Paper-Based All-in-One Origami Microdevice for Nucleic Acid Amplification Testing for Rapid Colorimetric Identification of Live Cells for Point-of-Care Testing
    Phuoc Tung Trieu, Nae Yoon Lee
    Analytical Chemistry.2019; 91(17): 11013.     CrossRef
  • Detection of Schistosoma mansoni-derived DNA in human urine samples by loop-mediated isothermal amplification (LAMP)
    Pedro Fernández-Soto, Javier Gandasegui, Cristina Carranza Rodríguez, José Luis Pérez-Arellano, Beatriz Crego-Vicente, Juan García-Bernalt Diego, Julio López-Abán, Belén Vicente, Antonio Muro, Fela Mendlovic
    PLOS ONE.2019; 14(3): e0214125.     CrossRef
  • Advances in the molecular diagnosis of tuberculosis: From probes to genomes
    Diana Machado, Isabel Couto, Miguel Viveiros
    Infection, Genetics and Evolution.2019; 72: 93.     CrossRef
  • Loop Mediated Isothermal Amplification: A Promising Tool for Screening Genetic Mutations
    Arjuna Srividya, Biswajit Maiti, Anirban Chakraborty, Gunimala Chakraborty
    Molecular Diagnosis & Therapy.2019; 23(6): 723.     CrossRef
  • Diagnosis and treatment of invasive fungal infections: looking ahead
    Maurizio Sanguinetti, Brunella Posteraro, Catherine Beigelman-Aubry, Frederic Lamoth, Vincent Dunet, Monica Slavin, Malcolm D Richardson
    Journal of Antimicrobial Chemotherapy.2019; 74(Supplement): ii27.     CrossRef
  • Target-catalyzed hairpin structure-mediated padlock cyclization for ultrasensitive rolling circle amplification
    Huanxia Song, Zhe Yang, Min Jiang, Guo Zhang, Yansha Gao, Zhifa Shen, Zai-Sheng Wu, Yongliang Lou
    Talanta.2019; 204: 29.     CrossRef
  • Rapid detection of the red fire ant Solenopsis invicta (Hymenoptera: Formicidae) by loop-mediated isothermal amplification
    Nobuyoshi Nakajima, Yoshiko Sakamoto, Koichi Goka
    Applied Entomology and Zoology.2019; 54(3): 319.     CrossRef
  • Progress in loop-mediated isothermal amplification assay for detection of Schistosoma mansoni DNA: towards a ready-to-use test
    J. García-Bernalt Diego, P. Fernández-Soto, B. Crego-Vicente, S. Alonso-Castrillejo, B. Febrer-Sendra, A. Gómez-Sánchez, B. Vicente, J. López-Abán, A. Muro
    Scientific Reports.2019;[Epub]     CrossRef
  • WarmStart colorimetric LAMP for the specific and rapid detection of HPV16 and HPV18 DNA
    M. Daskou, D. Tsakogiannis, T.G. Dimitriou, G.D. Amoutzias, D. Mossialos, C. Kottaridi, C. Gartzonika, P. Markoulatos
    Journal of Virological Methods.2019; 270: 87.     CrossRef
  • Rapid point‐of‐care diagnostics for the detection of Chlamydia pecorum in koalas (Phascolarctos cinereus) using loop‐mediated isothermal amplification without nucleic acid purification
    Lyndal S. Hulse, Sean McDonald, Stephen D. Johnston, Kenneth W. Beagley
    MicrobiologyOpen.2019;[Epub]     CrossRef
  • Reliability of direct varicella zoster virus loop-mediated isothermal amplification method for rapid diagnosis of breakthrough varicella
    Yuki Higashimoto, Yoshiki Kawamura, Ayumi Kuboshiki, Fumihiko Hattori, Hiroki Miura, Naoko Nishimura, Takao Ozaki, Masaru Ihira, Tetsushi Yoshikawa
    Journal of Clinical Virology.2019; 119: 53.     CrossRef
  • In Silico Identification of Novel Biomarkers and Development of New Rapid Diagnostic Tests for the Filarial Parasites Mansonella perstans and Mansonella ozzardi
    C. B. Poole, A. Sinha, L. Ettwiller, L. Apone, K. McKay, V. Panchapakesa, N. F. Lima, M. U. Ferreira, S. Wanji, C. K. S. Carlow
    Scientific Reports.2019;[Epub]     CrossRef
  • Cost Effectiveness of New Diagnostic Tools for Cutaneous Leishmaniasis in Afghanistan
    Céline Aerts, Martijn Vink, Sayed Jalal Pashtoon, Sami Nahzat, Albert Picado, Israel Cruz, Elisa Sicuri
    Applied Health Economics and Health Policy.2019; 17(2): 213.     CrossRef
  • Development of real‐time fluorescent reverse transcription loop‐mediated isothermal amplification assays for rhinovirus detection
    Mina Nakauchi, Ikuyo Takayama, Hitoshi Takahashi, Shohei Semba, Shinji Saito, Hideyuki Kubo, Atsushi Kaida, Kunihiro Oba, Shiho Nagata, Takato Odagiri, Tsutomu Kageyama
    Journal of Medical Virology.2019; 91(7): 1232.     CrossRef
  • Cascade Transcription Amplification of RNA Aptamer for Ultrasensitive MicroRNA Detection
    Mengxi Zhou, Xucong Teng, Yue Li, Ruijie Deng, Jinghong Li
    Analytical Chemistry.2019; 91(8): 5295.     CrossRef
  • Development of loop-mediated isothermal amplification combined with a chromatographic lateral-flow dipstick for rapid detection of Chattonella marina
    Yue Qin, Guofu Chen, Chunyun Zhang, Yuanyuan Wang, Jin Zhou
    Harmful Algae.2019; 89: 101666.     CrossRef
  • The burden of congenital Chagas disease and implementation of molecular diagnostic tools in Latin America
    Albert Picado, Israel Cruz, Maël Redard-Jacot, Alejandro G Schijman, Faustino Torrico, Sergio Sosa-Estani, Zachary Katz, Joseph Mathu Ndung’u
    BMJ Global Health.2018; 3(5): e001069.     CrossRef
  • Evaluation of fluorimetry and direct visualization to interpret results of a loop-mediated isothermal amplification kit to detect Leishmania DNA
    Ana V. Ibarra-Meneses, Israel Cruz, Carmen Chicharro, Carmen Sánchez, Sylvain Biéler, Tobias Broger, Javier Moreno, Eugenia Carrillo
    Parasites & Vectors.2018;[Epub]     CrossRef
  • An Integrated Real‐time Electrochemical LAMP Device for Pathogenic Bacteria Detection in Food
    Tsung‐Tao Huang, Shao‐Chung Liu, Chih‐Hung Huang, Chun‐Ju Lin, Sheng‐Tung Huang
    Electroanalysis.2018; 30(10): 2397.     CrossRef
  • Fluorescent analysis of bioactive molecules in single cells based on microfluidic chips
    Yuanyuan Fan, Defang Dong, Qingling Li, Haibin Si, Haimeng Pei, Lu Li, Bo Tang
    Lab on a Chip.2018; 18(8): 1151.     CrossRef
  • Bacterial pathogens were detected from human exhaled breath using a novel protocol
    Yunhao Zheng, Haoxuan Chen, Maosheng Yao, Xiaoguang Li
    Journal of Aerosol Science.2018; 117: 224.     CrossRef
  • Lateral Flow Loop-Mediated Isothermal Amplification Test with Stem Primers: Detection ofCryptosporidiumSpecies in Kenyan Children Presenting with Diarrhea
    Timothy S. Mamba, Cecilia K. Mbae, Johnson Kinyua, Erastus Mulinge, Gitonga Nkanata Mburugu, Zablon K. Njiru
    Journal of Tropical Medicine.2018; 2018: 1.     CrossRef
  • Detection of Zika virus using reverse-transcription LAMP coupled with reverse dot blot analysis in saliva
    Maite Sabalza, Rubina Yasmin, Cheryl A. Barber, Talita Castro, Daniel Malamud, Beum Jun Kim, Hui Zhu, Richard A. Montagna, William R. Abrams, Ruslan Kalendar
    PLOS ONE.2018; 13(2): e0192398.     CrossRef
  • Microbiological Sensing Technologies: A Review
    Firouz Abbasian, Ebrahim Ghafar-Zadeh, Sebastian Magierowski
    Bioengineering.2018; 5(1): 20.     CrossRef
  • Innovative PCR without DNA extraction for African sickle cell disease diagnosis
    L. Detemmerman, S. Olivier, V. Bours, F. Boemer
    Hematology.2018; 23(3): 181.     CrossRef
  • Evaluation of point-of-care tests for cutaneous leishmaniasis diagnosis in Kabul, Afghanistan
    Martijn M.T. Vink, Sami M. Nahzat, Habiburrahman Rahimi, Cyril Buhler, Bashir A. Ahmadi, Mohammad Nader, Fazal R. Zazai, Abdul S. Yousufzai, Merlin van Loenen, Henk D.F.H. Schallig, Albert Picado, Israel Cruz
    EBioMedicine.2018; 37: 453.     CrossRef
  • Field Evaluation of a Loop-Mediated Isothermal Amplification (LAMP) Platform for the Detection of Schistosoma japonicum Infection in Oncomelania hupensis Snails
    Zhi-Qiang Qin, Jing Xu, Ting Feng, Shan Lv, Ying-Jun Qian, Li-Juan Zhang, Yin-Long Li, Chao Lv, Robert Bergquist, Shi-Zhu Li, Xiao-Nong Zhou
    Tropical Medicine and Infectious Disease.2018; 3(4): 124.     CrossRef
  • A direct isothermal amplification system adapted for rapid SNP genotyping of multifarious sample types
    Xiaonan Liu, Chao Zhang, Mengye Zhao, Kewu Liu, Hang Li, Ningning Li, Linlin Gao, Xuemin Yang, Ting Ma, Juanli Zhu, Wenli Hui, Kai Hua, Yali Cui
    Biosensors and Bioelectronics.2018; 115: 70.     CrossRef
  • Field and laboratory comparative evaluation of a LAMP assay for the diagnosis of urogenital schistosomiasis in Cubal, Central Angola
    Javier Gandasegui, Pedro Fernández‐Soto, Elena Dacal, Esperanza Rodríguez, José María Saugar, Edward Yepes, María Luisa Aznar‐Ruiz‐de‐Alegría, Mateu Espasa, Arlette Ninda, Cristina Bocanegra, Fernando Salvador, Elena Sulleiro, Milagros Moreno, Belén Vicen
    Tropical Medicine & International Health.2018; 23(9): 992.     CrossRef
  • Rapid and simple detection of Ureaplasma species from vaginal swab samples using a loop‐mediated isothermal amplification method
    Kazumasa Fuwa, Mitsuko Seki, Yoshiyasu Hirata, Itaru Yanagihara, Yukiko Nakura, Chika Takano, Kazumichi Kuroda, Satoshi Hayakawa
    American Journal of Reproductive Immunology.2018;[Epub]     CrossRef
  • Direct and Rapid Detection and Quantification of Oenococcus oeni Cells in Wine by Cells-LAMP and Cells-qLAMP
    Verónica Soares-Santos, Isabel Pardo, Sergi Ferrer
    Frontiers in Microbiology.2018;[Epub]     CrossRef
  • Laboratory challenges in the diagnosis of hepatitis E virus
    Duaa W. Al-Sadeq, Amin F. Majdalawieh, Areej G. Mesleh, Omnya M. Abdalla, Gheyath K. Nasrallah
    Journal of Medical Microbiology.2018; 67(4): 466.     CrossRef
  • On-chip LAMP-BART reaction for viral DNA real-time bioluminescence detection
    M. Mirasoli, F. Bonvicini, N. Lovecchio, G. Petrucci, M. Zangheri, D. Calabria, F. Costantini, A. Roda, G. Gallinella, D. Caputo, G. de Cesare, A. Nascetti
    Sensors and Actuators B: Chemical.2018; 262: 1024.     CrossRef
  • OPTIMIZATION OF A METHOD OF ISOTHERMAL AMPLIFICATION (LAMP) FOR DIAGNOSIS OF WHOOPING COUGH
    A. S. Pimenova, O. Yu. Borisova, M. S. Petrova, E. V. Vlasov, I. S. Voronina, A. B. Borisova, S. S. Afanasiev, E. E. Donskich, L. I. Kafarskaya, V. A. Aleshkin, A. V. Aleshkin, M. S. Afanasiev, A. V. Karaulov
    Journal of microbiology, epidemiology and immunobiology.2018; 95(5): 37.     CrossRef
  • Reduced graphene oxide-polyaniline film as enhanced sensing interface for the detection of loop-mediated-isothermal-amplification products by open circuit potential measurement
    Vu Thi Thu, Bui Quang Tien, Dau Thi Ngoc Nga, Ly Cong Thanh, Le Hoang Sinh, Tu Cam Le, Tran Dai Lam
    RSC Advances.2018; 8(45): 25361.     CrossRef
  • Loop-mediated isothermal amplification: an effective method for express-diagnostics of cancer
    Yu. A. Makarova, A. A. Zotikov, G. A. Belyakova, B. Ya. Alekseev, M. Yu. Shkurnikov
    Cancer Urology.2018; 14(2): 88.     CrossRef
  • Microchip device with dry-stored reagents for Loop mediated isothermal amplification
    A Tupik, G Rudnitskaya, A Bulyanitsa, T Lukashenko, D Varlamov, A Evstrapov
    Journal of Physics: Conference Series.2018; 1124: 031015.     CrossRef
  • Real-time Detection and Monitoring of Loop Mediated Amplification (LAMP) Reaction Using Self-quenching and De-quenching Fluorogenic Probes
    Vijay J. Gadkar, David M. Goldfarb, Soren Gantt, Peter A. G. Tilley
    Scientific Reports.2018;[Epub]     CrossRef
  • Rapid in vitro detection of CTX-M groups 1, 2, 8, 9 resistance genes by LAMP assays
    Odile Lalainasoa Rivoarilala, Benoît Garin, Felamboahangy Andriamahery, Jean Marc Collard, Massimiliano Galdiero
    PLOS ONE.2018; 13(7): e0200421.     CrossRef
  • Microfluidic devices for Loop mediated isothermal amplification
    A Tupik, Y Posmitnaya, G Rudnitskaya, D Varlamov, A Evstrapov
    Journal of Physics: Conference Series.2018; 1135: 012110.     CrossRef
  • Loop-Mediated Isothermal Amplification on Crude DNA as a Point-of-Care Test for the Diagnosis of Mycoplasma-Related Vaginitis During Early Pregnancy
    Yichao Wang, Bumei Zhang, Yan Sun, Yunde Liu, Yajun Gu
    Laboratory Medicine.2018; 49(1): 59.     CrossRef
  • A Minireview of the Methods for Listeria monocytogenes Detection
    Aiping Liu, Li Shen, Zhenghai Zeng, Min Sun, Yuntao Liu, Shuliang Liu, Cheng Li, Xiaohong Wang
    Food Analytical Methods.2018; 11(1): 215.     CrossRef
  • Isothermal exponential amplification techniques: From basic principles to applications in electrochemical biosensors
    Hongjie Qi, Shuzhen Yue, Sai Bi, Caifeng Ding, Weiling Song
    Biosensors and Bioelectronics.2018; 110: 207.     CrossRef
  • Die exponentielle isotherme Amplifikation von Nukleinsäuren und Assays zur Detektion von Proteinen, Zellen, kleinen Molekülen und Enzymaktivitäten: Anwendungen für EXPAR
    Michael S. Reid, X. Chris Le, Hongquan Zhang
    Angewandte Chemie.2018; 130(37): 12030.     CrossRef
  • Comparative Evaluation of the Loop-Mediated Isothermal Amplification Assay for Detecting Pulmonary Tuberculosis
    Chang-Ki Kim, Eun A Cho, Dong Mi Shin, Sung Won Choi, So Youn Shin
    Annals of Laboratory Medicine.2018; 38(2): 119.     CrossRef
  • A field survey using LAMP assay for detection of Schistosoma mansoni in a low-transmission area of schistosomiasis in Umbuzeiro, Brazil: Assessment in human and snail samples
    Javier Gandasegui, Pedro Fernández-Soto, Antonio Muro, Constança Simões Barbosa, Fabio Lopes de Melo, Rodrigo Loyo, Elainne Christine de Souza Gomes, Justin V. Remais
    PLOS Neglected Tropical Diseases.2018; 12(3): e0006314.     CrossRef
  • A rapid and eco-friendly isothermal amplification microdevice for multiplex detection of foodborne pathogens
    Thi Ngoc Diep Trinh, Nae Yoon Lee
    Lab on a Chip.2018; 18(16): 2369.     CrossRef
  • Laboratory Methods in Molecular Epidemiology: Viral Infections
    Ricardo Parreira, Lee W. Riley, Ronald E. Blanton
    Microbiology Spectrum.2018;[Epub]     CrossRef
  • Comparison of Different Methods of RNA Preparation from Peripheral Blood for Nucleic Acid Amplification Assay
    Dong Eun Lee, Hanna Lee, Seon Duk Lee, Hyung Soo Han, Jae Young Choe, Sora Yun, Hong-Jun Park, Jungbae Park, Jong Kun Kim
    Indian Journal of Medical Microbiology.2018; 36(1): 77.     CrossRef
  • Rapid Detection Device for Salmonella typhi in Milk, Juice, Water and Calf Serum
    Avinash Kaur, Ritu Das, Mayank Rai Nigam, Ravikrishnan Elangovan, Deepal Pandya, Sandeep Jha, Dinesh Kalyanasundaram
    Indian Journal of Microbiology.2018; 58(3): 381.     CrossRef
  • The application of loop-mediated isothermal amplification (LAMP) assays for the rapid diagnosis of food-borne mycotoxigenic fungi
    Ludwig Niessen
    Current Opinion in Food Science.2018; 23: 11.     CrossRef
  • Validation of SYBR green I based closed tube loop mediated isothermal amplification (LAMP) assay and simplified direct-blood-lysis (DBL)-LAMP assay for diagnosis of visceral leishmaniasis (VL)
    Keerti Kaumudee Dixit, Sandeep Verma, Om Prakash Singh, Dharmendra Singh, Akhil Pratap Singh, Ratan Gupta, Narendra Singh Negi, Pradeep Das, Shyam Sundar, Ruchi Singh, Poonam Salotra, Sreenivas Gannavaram
    PLOS Neglected Tropical Diseases.2018; 12(11): e0006922.     CrossRef
  • Semiquantitative Nucleic Acid Test with Simultaneous Isotachophoretic Extraction and Amplification
    Andrew T. Bender, Mark D. Borysiak, Amanda M. Levenson, Lorraine Lillis, David S. Boyle, Jonathan D. Posner
    Analytical Chemistry.2018; 90(12): 7221.     CrossRef
  • Application of the LAMP assay for the detection of the Argentine ant, Linepithema humile (Hymenoptera: Formicidae), from captures of pan traps
    Tatsuya Ide, Natsumi Kanzaki, Hayato Masuya, Kimiko Okabe
    Applied Entomology and Zoology.2018; 53(2): 275.     CrossRef
  • Lineage specific detection of the scaly form of the pen shell Atrina spp. by a loop-mediated isothermal amplification method
    Kazumasa Hashimoto, Katsumasa Yamada, Akira Nagae, Yukihiko Matsuyama
    Fisheries Science.2018; 84(5): 837.     CrossRef
  • Diagnosis of amphimeriasis by LAMPhimerus assay in human stool samples long-term storage onto filter paper
    William Cevallos, Pedro Fernández-Soto, Manuel Calvopiña, María Buendía-Sánchez, Julio López-Abán, Belén Vicente, Antonio Muro, Ana Paula Arez
    PLOS ONE.2018; 13(2): e0192637.     CrossRef
  • Validation of loop‐mediated isothermal amplification for fast and portable sex determination across the phylogeny of birds
    A. Centeno‐Cuadros, J. L. Tella, M. Delibes, P. Edelaar, M. Carrete
    Molecular Ecology Resources.2018; 18(2): 251.     CrossRef
  • Exponential Isothermal Amplification of Nucleic Acids and Assays for Proteins, Cells, Small Molecules, and Enzyme Activities: An EXPAR Example
    Michael S. Reid, X. Chris Le, Hongquan Zhang
    Angewandte Chemie International Edition.2018; 57(37): 11856.     CrossRef
  • Loop-mediated isothermal amplification (LAMP) shield for Arduino DNA detection
    Aldrik H. Velders, Cor Schoen, Vittorio Saggiomo
    BMC Research Notes.2018;[Epub]     CrossRef
  • Aptamer selection and application in multivalent binding-based electrical impedance detection of inactivated H1N1 virus
    Chenjun Bai, Zhangwei Lu, Hua Jiang, Zihua Yang, Xuemei Liu, Hongmei Ding, Hui Li, Jie Dong, Aixue Huang, Tao Fang, Yongqiang Jiang, Lingling Zhu, Xinhui Lou, Shaohua Li, Ningsheng Shao
    Biosensors and Bioelectronics.2018; 110: 162.     CrossRef
  • HCV Detection, Discrimination, and Genotyping Technologies
    Shrikant Dashrath Warkad, Satish Balasaheb Nimse, Keum-Soo Song, Taisun Kim
    Sensors.2018; 18(10): 3423.     CrossRef
  • Chromogenic detection of yam mosaic virus by closed-tube reverse transcription loop-mediated isothermal amplification (CT-RT-LAMP)
    Chukwuemeka K. Nkere, Joshua O. Oyekanmi, Gonçalo Silva, Moritz Bömer, Gabriel I. Atiri, Joseph Onyeka, Norbert G. Maroya, Susan E. Seal, P. Lava Kumar
    Archives of Virology.2018; 163(4): 1057.     CrossRef
  • Sensitive and less invasive confirmatory diagnosis of visceral leishmaniasis in Sudan using loop-mediated isothermal amplification (LAMP)
    Maowia Mukhtar, Sababil S. Ali, Salah A. Boshara, Audrey Albertini, Séverine Monnerat, Paul Bessell, Yasuyoshi Mori, Yutaka Kubota, Joseph M. Ndung’u, Israel Cruz, Anne-Laure Bañuls
    PLOS Neglected Tropical Diseases.2018; 12(2): e0006264.     CrossRef
  • Community-Acquired Pneumonia in Children: the Challenges of Microbiological Diagnosis
    C. M. C. Rodrigues, H. Groves, Colleen Suzanne Kraft
    Journal of Clinical Microbiology.2018;[Epub]     CrossRef
  • Évaluation d’une technique LAMP pour le diagnostic de la prédisposition génétique à l’intolérance au lactose
    Minh-Toàn Duong, Lise Hebert, Sébastien Courcelle, Franck Ceppa, Hervé Delacour
    Revue Francophone des Laboratoires.2018; 2018(504): 20.     CrossRef
  • Loop-mediated isothermal amplification for visual detection of Vibrio parahaemolyticus using gold nanoparticles
    Cong Kong, Yuan Wang, Essy Kouadio Fodjo, Guang-xin Yang, Feng Han, Xiao-sheng Shen
    Microchimica Acta.2018;[Epub]     CrossRef
  • Loop-mediated isothermal amplification (LAMP): a versatile technique for detection of micro-organisms
    Y.-P. Wong, S. Othman, Y.-L. Lau, S. Radu, H.-Y. Chee
    Journal of Applied Microbiology.2018; 124(3): 626.     CrossRef
  • Multiplex sample-to-answer detection of bacteria using a pipette-actuated capillary array comb with integrated DNA extraction, isothermal amplification, and smartphone detection
    Junhou Hui, Yin Gu, Yuanshou Zhu, Yanjing Chen, Shu-juan Guo, Sheng-ce Tao, Yan Zhang, Peng Liu
    Lab on a Chip.2018; 18(18): 2854.     CrossRef
  • EFFICIENCY OF APPLICATION OF ISOTHERMAL AMPLIFICATION AT INSPECTION OF PATIENTS WITH WHOOPING COUGH
    A. S. Pimenova, O. Yu. Borisova, M. S. Petrova, I. S. Voronina, A. B. Borisova, O. V. Shamsheva, S. S. Afanasiev, E. V. Vlasov, V. A. Aleshkin
    Russian Journal of Infection and Immunity.2018; 8(3): 361.     CrossRef
  • Rapid discriminative detection of dengue viruses via loop mediated isothermal amplification
    Jong-Gil Kim, Seung Hoon Baek, Seungrok Kim, Hae In Kim, Seung Woo Lee, Le Minh Tu Phan, Suresh Kumar Kailasa, Tae Jung Park
    Talanta.2018; 190: 391.     CrossRef
  • A multiplex microfluidic loop-mediated isothermal amplification array for detection of malaria-related parasites and vectors
    Rui Mao, Ge Ge, Zhuo Wang, Rongzhang Hao, Guohao Zhang, Zhenzhou Yang, Bincheng Lin, Yajun Ma, Hongtao Liu, Yuguang Du
    Acta Tropica.2018; 178: 86.     CrossRef
  • Detection of HCV genotypes 1b and 2a by a reverse transcription loop‐mediated isothermal amplification assay
    Na Zhao, Jinxia Liu, Dianxing Sun
    Journal of Medical Virology.2017; 89(6): 1048.     CrossRef
  • A smartphone-based diagnostic platform for rapid detection of Zika, chikungunya, and dengue viruses
    Aashish Priye, Sara W. Bird, Yooli K. Light, Cameron S. Ball, Oscar A. Negrete, Robert J. Meagher
    Scientific Reports.2017;[Epub]     CrossRef
  • Microbial genomics and antimicrobial susceptibility testing
    W. Michael Dunne Jr, Magali Jaillard, Olivier Rochas, Alex Van Belkum
    Expert Review of Molecular Diagnostics.2017; 17(3): 257.     CrossRef
  • Rapid visual identification of bovine meat by loop mediated isothermal amplification combined with immunochromatographic strip
    Yong-Jin Li, Jin-Yu Fan
    BioChip Journal.2017; 11(1): 8.     CrossRef
  • Development of a Quantitative Loop-Mediated Isothermal Amplification Assay for the Rapid Detection of Novel Goose Parvovirus
    Jing Yang, Hao Chen, Zhenzhong Wang, Xianglong Yu, Xiaoyu Niu, Yi Tang, Youxiang Diao
    Frontiers in Microbiology.2017;[Epub]     CrossRef
  • LAMPhimerus: A novel LAMP assay for detecting Amphimerus sp. DNA in human stool samples
    William Cevallos, Pedro Fernández-Soto, Manuel Calvopiña, Cristina Fontecha-Cuenca, Hiromu Sugiyama, Megumi Sato, Julio López Abán, Belén Vicente, Antonio Muro, David Blair
    PLOS Neglected Tropical Diseases.2017; 11(6): e0005672.     CrossRef
  • Stem loop-mediated isothermal amplification test: comparative analysis with classical LAMP and PCR in detection of Entamoeba histolytica in Kenya
    Fridah Mwendwa, Cecilia K. Mbae, Johnson Kinyua, Erastus Mulinge, Gitonga Nkanata Mburugu, Zablon K. Njiru
    BMC Research Notes.2017;[Epub]     CrossRef
  • Rapid pathogen-specific phenotypic antibiotic susceptibility testing using digital LAMP quantification in clinical samples
    Nathan G. Schoepp, Travis S. Schlappi, Matthew S. Curtis, Slava S. Butkovich, Shelley Miller, Romney M. Humphries, Rustem F. Ismagilov
    Science Translational Medicine.2017;[Epub]     CrossRef
  • Nuclease-free target recycling signal amplification for ultrasensitive multiplexing DNA biosensing
    Zhihan Zhao, Shixing Chen, Jianbang Wang, Jing Su, Jiaqiang Xu, Sanjay Mathur, Chunhai Fan, Shiping Song
    Biosensors and Bioelectronics.2017; 94: 605.     CrossRef
  • Identification of Methicillin-Resistant Staphylococcus aureus (MRSA) Using Simultaneous Detection of mecA, nuc, and femB by Loop-Mediated Isothermal Amplification (LAMP)
    Changguo Chen, Qiangyuan Zhao, Jianwei Guo, Yanjun Li, Qiuyuan Chen
    Current Microbiology.2017; 74(8): 965.     CrossRef
  • Paper microchip with a graphene-modified silver nano-composite electrode for electrical sensing of microbial pathogens
    Mohammadali Safavieh, Vivasvat Kaul, Sultan Khetani, Anupriya Singh, Karan Dhingra, Manoj Kumar Kanakasabapathy, Mohamed Shehata Draz, Adnan Memic, Daniel R. Kuritzkes, Hadi Shafiee
    Nanoscale.2017; 9(5): 1852.     CrossRef
  • Loop‐mediated isothermal amplification (LAMP) as an alternative to PCR: A rapid on‐site detection of gene doping
    Olivier Salamin, Tiia Kuuranne, Martial Saugy, Nicolas Leuenberger
    Drug Testing and Analysis.2017; 9(11-12): 1731.     CrossRef
  • A loop-mediated, isothermal amplification-based method for visual detection of Vibrio parahaemolyticus within only 1 h, from shrimp sampling to results
    Rui Wang, Xingning Xiao, Yuan Chen, Jun Wu, Wenjuan Qian, Liu Wang, Yuan Liu, Feng Ji, Jian Wu
    Analytical Methods.2017; 9(11): 1695.     CrossRef
  • Hands-free smartphone-based diagnostics for simultaneous detection of Zika, Chikungunya, and Dengue at point-of-care
    A. Ganguli, A. Ornob, H. Yu, G. L. Damhorst, W. Chen, F. Sun, A. Bhuiya, B. T. Cunningham, R. Bashir
    Biomedical Microdevices.2017;[Epub]     CrossRef
  • Establishment and Evaluation of a Loop-Mediated Isothermal Amplification Assay for Detection of Raccoon Dog in Meat Mixtures
    Jinhua Liu, Yanyu Shi, Siying Teng, Lianpeng Wu, Xinmin Zhang
    Journal of Food Quality.2017; 2017: 1.     CrossRef
  • Development of a recombinase polymerase amplification lateral flow dipstick (RPA-LFD) for the field diagnosis of caprine arthritis-encephalitis virus (CAEV) infection
    Po-An Tu, Jia-Shian Shiu, Shu-Hwae Lee, Victor Fei Pang, De-Chi Wang, Pei-Hwa Wang
    Journal of Virological Methods.2017; 243: 98.     CrossRef
  • Loop-mediated isothermal amplification (LAMP) for detection of the red ring nematode, Bursaphelenchus cocophilus
    Tatsuya Ide, Natsumi Kanzaki, Pedro Pablo Parra Giraldo, Robin M. Giblin-Davis
    Nematology.2017; 19(5): 559.     CrossRef
  • A smart sealed nucleic acid biosensor based on endogenous reference gene detection to screen and identify mammals on site
    Yuancong Xu, Wenjin Xiang, Qin Wang, Nan Cheng, Li Zhang, Kunlun Huang, Wentao Xu
    Scientific Reports.2017;[Epub]     CrossRef
  • Development of a loop-mediated isothermal amplification technique and comparison with quantitative real-time PCR for the rapid visual detection of canine neosporosis
    Aongart Mahittikorn, Nipa Thammasonthijarern, Amonrattana Roobthaisong, Ruenruetai Udonsom, Supaluk Popruk, Sukhontha Siri, Hirotake Mori, Yaowalark Sukthana
    Parasites & Vectors.2017;[Epub]     CrossRef
  • Analytical sensitivity and specificity of a loop-mediated isothermal amplification (LAMP) kit prototype for detection of Trypanosoma cruzi DNA in human blood samples
    Susana A. Besuschio, Mónica Llano Murcia, Alejandro F. Benatar, Severine Monnerat, Israel Cruz, Albert Picado, María de los Ángeles Curto, Yutaka Kubota, Diana P. Wehrendt, Paula Pavia, Yasuyoshi Mori, Concepción Puerta, Joseph M. Ndung'u, Alejandro G. Sc
    PLOS Neglected Tropical Diseases.2017; 11(7): e0005779.     CrossRef
  • The development of loop-mediated isothermal amplification (LAMP) assays for the rapid authentication of five forbidden vegetables in strict vegetarian diets
    Meng-Shiou Lee, Ting-Ying Su, Yi-Yang Lien, Shyang-Chwen Sheu
    Scientific Reports.2017;[Epub]     CrossRef
  • Development and evaluation of rapid novel isothermal amplification assays for important veterinary pathogens:Chlamydia psittaciandChlamydia pecorum
    Martina Jelocnik, Md. Mominul Islam, Danielle Madden, Cheryl Jenkins, James Branley, Scott Carver, Adam Polkinghorne
    PeerJ.2017; 5: e3799.     CrossRef
  • Sequence-specific validation of LAMP amplicons in real-time optomagnetic detection of Dengue serotype 2 synthetic DNA
    Gabriel Antonio S. Minero, Catarina Nogueira, Giovanni Rizzi, Bo Tian, Jeppe Fock, Marco Donolato, Mattias Strömberg, Mikkel F. Hansen
    The Analyst.2017; 142(18): 3441.     CrossRef
  • Detection of schistosomiasis applicable for primary health care facilities in endemic regions of Africa
    Alžbeta Kaiglová, Pavol Beňo, Mwatasa J. S. Changoma
    Biologia.2017; 72(10): 1113.     CrossRef
  • A Digital Microfluidics Platform for Loop-Mediated Isothermal Amplification Detection
    Beatriz Coelho, Bruno Veigas, Hugo Águas, Elvira Fortunato, Rodrigo Martins, Pedro Baptista, Rui Igreja
    Sensors.2017; 17(11): 2616.     CrossRef
  • Molecular detection of genotype II grass carp reovirus based on nucleic acid sequence-based amplification combined with enzyme-linked immunosorbent assay (NASBA-ELISA)
    Weiwei Zeng, Wei Yao, Yingying Wang, Yingying Li, Sven M. Bermann, Yan Ren, Cunbin Shi, Xinjian Song, Qiwen Huang, Shuchen Zheng, Qing Wang
    Journal of Virological Methods.2017; 243: 92.     CrossRef
  • Detection assay for HPV16 and HPV18 by loop-mediated isothermal amplification with lateral flow dipstick tests
    Ratchanida Kumvongpin, Patcharee Jearanaikoon, Chotchana Wilailuckana, Nattaya Sae-Ung, Prinya Prasongdee, Sakda Daduang, Metee Wongsena, Patcharee Boonsiri, Wansika Kiatpathomchai, Sukumarn Sanersak Swangvaree, Alisa Sandee, Jureerut Daduang
    Molecular Medicine Reports.2017; 15(5): 3203.     CrossRef
  • Colorimetric tests for diagnosis of filarial infection and vector surveillance using non-instrumented nucleic acid loop-mediated isothermal amplification (NINA-LAMP)
    Catherine B. Poole, Zhiru Li, Andy Alhassan, Dylan Guelig, Steven Diesburg, Nathan A. Tanner, Yinhua Zhang, Thomas C. Evans, Paul LaBarre, Samuel Wanji, Robert A. Burton, Clotilde K. S. Carlow, Matty Knight
    PLOS ONE.2017; 12(2): e0169011.     CrossRef
  • Mie Scatter and Interfacial Tension Based Real‐Time Quantification of Colloidal Emulsion Nucleic Acid Amplification
    Ariana M. Nicolini, Tyler D. Toth, Samuel Y. Kim, M. Alejandra Mandel, David W. Galbraith, Jeong‐Yeol Yoon
    Advanced Biosystems.2017;[Epub]     CrossRef
  • Development and evaluation of a rapid molecular diagnostic test for Zika virus infection by reverse transcription loop-mediated isothermal amplification
    Yohei Kurosaki, Danyelly Bruneska Gondim Martins, Mayuko Kimura, Andriu dos Santos Catena, Maria Amélia Carlos Souto Maior Borba, Sandra da Silva Mattos, Haruka Abe, Rokusuke Yoshikawa, José Luiz de Lima Filho, Jiro Yasuda
    Scientific Reports.2017;[Epub]     CrossRef
  • Effects of supplement additives on anaerobic biogas production
    Minsoo Kim, Dan Li, Okkyoung Choi, Byoung-In Sang, Pen Chi Chiang, Hyunook Kim
    Korean Journal of Chemical Engineering.2017; 34(10): 2678.     CrossRef
  • Rapid on-site evaluation of the development of resistance to quinone outside inhibitors in Botrytis cinerea
    X. R. Hu, D. J. Dai, H. D. Wang, C. Q. Zhang
    Scientific Reports.2017;[Epub]     CrossRef
  • DNA amplification in the field: move over PCR, here comes LAMP
    Patricia L. M. Lee
    Molecular Ecology Resources.2017; 17(2): 138.     CrossRef
  • Rapid and Sensitive Detection of sFAT-1 Transgenic Pigs by Visual Loop-Mediated Isothermal Amplification
    Chenyu Tao, Yalan Yang, Xunbi Li, Xinmin Zheng, Hongyan Ren, Kui Li, Rong Zhou
    Applied Biochemistry and Biotechnology.2016; 179(6): 938.     CrossRef
  • Peste des petits ruminants diagnosis and diagnostic tools at a glance: perspectives on global control and eradication
    Ramasamy Santhamani, Rabindra Prasad Singh, Felix Njeumi
    Archives of Virology.2016; 161(11): 2953.     CrossRef
  • Molecular Identification of an Invasive Wood-Boring InsectLyctus brunneus(Coleoptera: Bostrichidae: Lyctinae) Using Frass by Loop-Mediated Isothermal Amplification and Nested PCR Assays
    Tatsuya Ide, Natsumi Kanzaki, Wakako Ohmura, Kimiko Okabe
    Journal of Economic Entomology.2016; 109(3): 1410.     CrossRef
  • Porcine epidemic diarrhea virus: An overview of current virological and serological diagnostic methods
    D.G. Diel, S. Lawson, F. Okda, A. Singrey, T. Clement, M.H.V. Fernandes, J. Christopher-Hennings, E.A. Nelson
    Virus Research.2016; 226: 60.     CrossRef
  • Sequence selective naked-eye detection of DNA harnessing extension of oligonucleotide-modified nucleotides
    Daniela Verga, Moritz Welter, Andreas Marx
    Bioorganic & Medicinal Chemistry Letters.2016; 26(3): 841.     CrossRef
  • A field-deployable mobile molecular diagnostic system for malaria at the point of need
    Gihoon Choi, Daniel Song, Sony Shrestha, Jun Miao, Liwang Cui, Weihua Guan
    Lab on a Chip.2016; 16(22): 4341.     CrossRef
  • What’s New in Point-of-Care Testing?
    Rachel D. Le, Ida Bixho, Stacy E. F. Melanson
    Point of Care: The Journal of Near-Patient Testing & Technology.2016; 15(4): 158.     CrossRef
  • Strong-LAMP: A LAMP Assay for Strongyloides spp. Detection in Stool and Urine Samples. Towards the Diagnosis of Human Strongyloidiasis Starting from a Rodent Model
    Pedro Fernández-Soto, Alicia Sánchez-Hernández, Javier Gandasegui, Cristina Bajo Santos, Julio López-Abán, José María Saugar, Esperanza Rodríguez, Belén Vicente, Antonio Muro, James S McCarthy
    PLOS Neglected Tropical Diseases.2016; 10(7): e0004836.     CrossRef
  • Comparison of a new visual isothermal nucleic acid amplification test with PCR and skin snip analysis for diagnosis of onchocerciasis in humans
    Andy Alhassan, Mike Y. Osei-Atweneboana, Kwadwo F. Kyeremeh, Catherine B. Poole, Zhiru Li, Edward Tettevi, Nathan A. Tanner, Clotilde K.S. Carlow
    Molecular and Biochemical Parasitology.2016; 210(1-2): 10.     CrossRef
  • Rapid and specific detection of Tilletia indica using loop-mediated isothermal DNA amplification
    Y. Gao, M. K. Tan, Y. G. Zhu
    Australasian Plant Pathology.2016; 45(4): 361.     CrossRef
  • Establishment and application of a real-time loop-mediated isothermal amplification system for the detection of CYP2C19 polymorphisms
    Chao Zhang, Yao Yao, Juan-Li Zhu, Si-Nong Zhang, Shan-Shan Zhang, Hua Wei, Wen-Li Hui, Ya-Li Cui
    Scientific Reports.2016;[Epub]     CrossRef
  • A Novel Loop-Mediated Isothermal Amplification Assay for Serogroup Identification of Neisseria meningitidis in Cerebrospinal Fluid
    DoKyung Lee, Eun Jin Kim, Paul E. Kilgore, Hideyuki Takahashi, Makoto Ohnishi, Jun Tomono, Shigehiko Miyamoto, Daisuke Omagari, Dong Wook Kim, Mitsuko Seki
    Frontiers in Microbiology.2016;[Epub]     CrossRef
  • Molecular Identification of the Western Drywood Termite (Isoptera: Kalotermitidae) by Loop-Mediated Isothermal Amplification of DNA from Fecal Pellets
    Tatsuya Ide, Natsumi Kanzaki, Wakako Ohmura, Kimiko Okabe
    Journal of Economic Entomology.2016; 109(5): 2234.     CrossRef
  • An Innovative Method for Rapid Identification and Detection of Vibrio alginolyticus in Different Infection Models
    Kaifei Fu, Jun Li, Yuxiao Wang, Jianfei Liu, He Yan, Lei Shi, Lijun Zhou
    Frontiers in Microbiology.2016;[Epub]     CrossRef
  • Rapid authentication of the precious herb saffron by loop-mediated isothermal amplification (LAMP) based on internal transcribed spacer 2 (ITS2) sequence
    Mingming Zhao, Yuhua Shi, Lan Wu, Licheng Guo, Wei Liu, Chao Xiong, Song Yan, Wei Sun, Shilin Chen
    Scientific Reports.2016;[Epub]     CrossRef
  • An integrated lateral flow assay for effective DNA amplification and detection at the point of care
    Jane Ru Choi, Jie Hu, Yan Gong, Shangsheng Feng, Wan Abu Bakar Wan Abas, Belinda Pingguan-Murphy, Feng Xu
    The Analyst.2016; 141(10): 2930.     CrossRef
  • Direct loop mediated isothermal amplification on filters for quantification of Dehalobacter in groundwater
    Robert D Stedtfeld, Tiffany M Stedtfeld, Farag Samhan, Yogendra H Kanitkar, Paul B. Hatzinger, Alison M Cupples, Syed A Hashsham
    Journal of Microbiological Methods.2016; 131: 61.     CrossRef
  • Centrifugal loop-mediated isothermal amplification microdevice for rapid, multiplex and colorimetric foodborne pathogen detection
    Seung Jun Oh, Byung Hyun Park, Jae Hwan Jung, Goro Choi, Doh C. Lee, Do Hyun Kim, Tae Seok Seo
    Biosensors and Bioelectronics.2016; 75: 293.     CrossRef
  • Laboratory Diagnosis of Central Nervous System Infection
    Taojun He, Samuel Kaplan, Mini Kamboj, Yi-Wei Tang
    Current Infectious Disease Reports.2016;[Epub]     CrossRef
  • Emerging Loop-Mediated Isothermal Amplification-Based Microchip and Microdevice Technologies for Nucleic Acid Detection
    Mohammadali Safavieh, Manoj K. Kanakasabapathy, Farhang Tarlan, Minhaz U. Ahmed, Mohammed Zourob, Waseem Asghar, Hadi Shafiee
    ACS Biomaterials Science & Engineering.2016; 2(3): 278.     CrossRef
  • An integrated paper-based sample-to-answer biosensor for nucleic acid testing at the point of care
    Jane Ru Choi, Jie Hu, Ruihua Tang, Yan Gong, Shangsheng Feng, Hui Ren, Ting Wen, XiuJun Li, Wan Abu Bakar Wan Abas, Belinda Pingguan-Murphy, Feng Xu
    Lab on a Chip.2016; 16(3): 611.     CrossRef
  • Biompha-LAMP: A New Rapid Loop-Mediated Isothermal Amplification Assay for Detecting Schistosoma mansoni in Biomphalaria glabrata Snail Host
    Javier Gandasegui, Pedro Fernández-Soto, Juan Hernández-Goenaga, Julio López-Abán, Belén Vicente, Antonio Muro, Matty Knight
    PLOS Neglected Tropical Diseases.2016; 10(12): e0005225.     CrossRef
  • Detection of Bar Transgenic Sugarcane with a Rapid and Visual Loop-Mediated Isothermal Amplification Assay
    Dinggang Zhou, Chunfeng Wang, Zhu Li, Yun Chen, Shiwu Gao, Jinlong Guo, Wenying Lu, Yachun Su, Liping Xu, Youxiong Que
    Frontiers in Plant Science.2016;[Epub]     CrossRef
  • A novel microfluidic device that integrates nucleic acid extraction, amplification, and detection to identify an EGFR mutation in lung cancer tissues
    Yuanbin Liu, Yang Zhao, Yongxin Qin, Xiaohui Du, Qi Wang, Jianxin Lyu
    RSC Advances.2016; 6(16): 13399.     CrossRef
  • High sensitivity, loop-mediated isothermal amplification combined with colorimetric gold-nanoparticle probes for visual detection of high risk human papillomavirus genotypes 16 and 18
    Ratchanida Kumvongpin, Patcharee Jearanaikool, Chotechana Wilailuckana, Nattaya Sae-ung, Prinya Prasongdee, Sakda Daduang, Metee Wongsena, Patcharee Boonsiri, Wansika Kiatpathomchai, Sukumarn Sanersak Swangvaree, Alisa Sandee, Jureerut Daduang
    Journal of Virological Methods.2016; 234: 90.     CrossRef
  • An isothermal DNA amplification method for detection of Onchocerca volvulus infection in skin biopsies
    Ole Lagatie, Michelle Merino, Linda Batsa Debrah, Alexander Y. Debrah, Lieven J. Stuyver
    Parasites & Vectors.2016;[Epub]     CrossRef
  • An Advanced Visual Qualitative and EVA Green‐Based Quantitative Isothermal Amplification Method to Detect Listeria Monocytogenes
    Nan Cheng, Yuancong Xu, Xinghua Yan, Ying Shang, Pengyu Zhu, Wenying Tian, Zhihong Liang, Wentao Xu
    Journal of Food Safety.2016; 36(2): 237.     CrossRef
  • A Loop-Mediated Isothermal Amplification Assay and Sample Preparation Procedure for Sensitive Detection of Xanthomonas fragariae in Strawberry
    Hehe Wang, William W. Turechek, Tzong-Yueh Chen
    PLOS ONE.2016; 11(1): e0147122.     CrossRef
  • Laboratory Diagnosis of Pertussis
    Anneke van der Zee, Joop F. P. Schellekens, Frits R. Mooi
    Clinical Microbiology Reviews.2015; 28(4): 1005.     CrossRef
  • Isothermal Amplification of Nucleic Acids
    Yongxi Zhao, Feng Chen, Qian Li, Lihua Wang, Chunhai Fan
    Chemical Reviews.2015; 115(22): 12491.     CrossRef
  • Adsorption and isolation of nucleic acids on cellulose magnetic beads using a three-dimensional printed microfluidic chip
    Lei Zhang, Rachel N. Deraney, Anubhav Tripathi
    Biomicrofluidics.2015;[Epub]     CrossRef
  • The Novel Multiple Inner Primers-Loop-Mediated Isothermal Amplification (MIP-LAMP) for Rapid Detection and Differentiation of Listeria monocytogenes
    Yi Wang, Yan Wang, Aijing Ma, Dongxun Li, Lijuan Luo, Dongxin Liu, Shoukui Hu, Dong Jin, Kai Liu, Changyun Ye
    Molecules.2015; 20(12): 21515.     CrossRef
  • Development of reverse transcription loop mediated isothermal amplification assay for rapid detection of bluetongue viruses
    Sreekala S. Mohandas, Dhanavelu Muthuchelvan, Awadh Bihari Pandey, Sanchay Kumar Biswas, Karam Chand, Gnanavel Venkatesan, Dheeraj Choudhary, Muthannan Andavar Ramakrishnan, Bimalendu Mondal
    Journal of Virological Methods.2015; 222: 103.     CrossRef
  • The Rapid-Heat LAMPellet Method: A Potential Diagnostic Method for Human Urogenital Schistosomiasis
    Javier Gandasegui, Pedro Fernández-Soto, Cristina Carranza-Rodríguez, José Luis Pérez-Arellano, Belén Vicente, Julio López-Abán, Antonio Muro, Jeffrey Michael Bethony
    PLOS Neglected Tropical Diseases.2015; 9(7): e0003963.     CrossRef
  • Expanding the MDx toolbox for filarial diagnosis and surveillance
    Andy Alhassan, Zhiru Li, Catherine B. Poole, Clotilde K.S. Carlow
    Trends in Parasitology.2015; 31(8): 391.     CrossRef
  • Detection of Mycobacterium tuberculosis complex in sputum specimens using a loop-mediated isothermal amplification assay in Korea
    Se Hoon Moon, Eun Jin Kim, Jun Tomono, Shigehiko Miyamoto, Satoshi Mitarai, Dong Wook Kim, Mitsuko Seki
    Journal of Medical Microbiology .2015; 64(11): 1335.     CrossRef
  • Genome Filtering for New DNA Biomarkers of Loa loa Infection Suitable for Loop-Mediated Isothermal Amplification
    Catherine B. Poole, Laurence Ettwiller, Nathan A. Tanner, Thomas C. Evans, Samuel Wanji, Clotilde K. S. Carlow, Matty Knight
    PLOS ONE.2015; 10(9): e0139286.     CrossRef
REVIEW] Candida albicans, a Major Human Fungal Pathogen
Joon Kim , Peter Sudbery
J. Microbiol. 2011;49(2):171-177.   Published online May 3, 2011
DOI: https://doi.org/10.1007/s12275-011-1064-7
  • 1,718 View
  • 0 Download
  • 331 Crossref
AbstractAbstract PDF
Candida albicans is the most common human fungal pathogen (Beck-Sague and Jarvis, 1993). It is normally a harmless commensal organism. However, it is a opportunistic pathogen for some immunologically weak and immunocompromised people. It is responsible for painful mucosal infections such as the vaginitis in women and oral-pharangeal thrush in AIDS patients. In certain groups of vulnerable patients it causes severe, life-threatening bloodstream infections and it causes severe, life-threatening bloodstream infections and subsequent infections in the internal organs. There are various fascinating features of the C. albicans life cycle and biology that have made the pathogen the subject of extensive research, including its ability to grow in unicellular yeast, psudohyphal, and hyphal forms (Fig. 1A); its ability to switch between different but stable phenotypic states, and the way that it retains the ability to mate but apparently loses the ability to go through meiosis to complete the sexual cycle. This research has been greatly facilitated by the derivation of the complete C. albicans genome sequence (Braun et al., 2005), the development of a variety of molecular tools for gene manipulation, and a store of underpinning knowledge of cell biology borrowed from the distantly related model yeast Saccharomyces cerevisiae (Berman and Sudbery, 2002; Noble and Johnson, 2007). This review will provide a brief overview of the importance of C. albicans as a public health issue, the experimental tools developed to study its fascinating biology, and some examples of how these have been applied.

Citations

Citations to this article as recorded by  
  • Antifungal Properties of Polycephalomyces nipponicus (Ascomycetes) against Candida albicans: Potential for Novel Therapeutic Development
    Sutthiwan Thammawat, Winita Fowsantear, Kusavadee Sangdee, Aphidech Sangdee
    International Journal of Medicinal Mushrooms.2025; 27(1): 81.     CrossRef
  • New Temporin A Analogues Modified in Positions 1 and 10—Synthesis and Biological Studies
    Dilyana Dimitrova, Veronica Nemska, Ivan Iliev, Stoyko Petrin, Nelly Georgieva, Dancho Danalev
    Pharmaceutics.2025; 17(4): 396.     CrossRef
  • HR-LCMS-based metabolite profiling and evaluation of in-vitro anti-oxidant, antimicrobial and antibiofilm activities of aerial parts of Symplocos rosea Bedd. (Symplocaceae), an endemic species to Southern Western Ghats
    Arsha Narayanan, Sekaran Sathunni, Shiburaj Sugathan
    Vegetos.2025;[Epub]     CrossRef
  • Targeting biofilm formation in Candida albicans with halogenated pyrrolopyrimidine derivatives
    Yong-Guy Kim, Hyejin Jeon, Bharath Reddy Boya, Jin-Hyung Lee, Jintae Lee
    European Journal of Medicinal Chemistry.2025; 290: 117528.     CrossRef
  • Biofilm-Associated Candidiasis: Pathogenesis, Prevalence, Challenges and Therapeutic Options
    Valerie Amann, Ann-Kathrin Kissmann, Carolina Firacative, Frank Rosenau
    Pharmaceuticals.2025; 18(4): 460.     CrossRef
  • Vismia guianensis Improves Survival of Tenebrio molitor and Mice During Lethal Infection with Candida albicans
    Arthur André Castro Costa, Elizangela Pestana Motta, Aluísio Silva Oliveira, Pamela Gomes Santos, Josivan Regis Farias, Danielle Cristine Gomes Franco, Mayara Cristina Pinto Silva, Nicolle Teixeira Barbosa, Simone Batista Muniz, Luís Douglas Miranda. Silv
    Antibiotics.2025; 14(1): 72.     CrossRef
  • Valorization of spent coffee grounds as an antimicrobial agent and variation of its potential according to solvent extraction and microbial strain: a multivariate comparative study
    Zakarya Aalam, Adil Khtira, Mohamed Joine, Najlae Akbib, Said Gharby, El Hassan Sakar
    Biomass Conversion and Biorefinery.2025; 15(8): 12959.     CrossRef
  • Design of a Novel DNA-FISH Probe for the Rapid Identification of Candida albicans in Cosmetic Products
    Patrícia Branco, Margarida Nunes, Paula Pereira, Elisabete Muchagato Mauricio
    Cosmetics.2025; 12(3): 115.     CrossRef
  • Real-time monitoring of Candida albicans biofilm growth and 4-HPA-mediated inhibition using an optoelectrochemical platform
    Anmol Kulshrestha, Pratima Gupta, Vivek Kumar Singh, Abhishek Kumar, Sonal Fande, Sanket Goel
    Microfluidics and Nanofluidics.2025;[Epub]     CrossRef
  • Nanocomposite films of pectin–halloysite nanotubes for the sustained oral delivery of griseofulvin with lavender oil: development, characterization, and pharmacokinetic evaluation
    Saleha Babar, Ghulam Abbas, Shahid Shah
    Bioinspired, Biomimetic and Nanobiomaterials.2025; 14(2): 101.     CrossRef
  • Set1 is a critical transcriptional regulator in response to external signals in Candida albicans
    Jueun Kim, Jiyeon Park, Eun-Jin Lee, Yong-Joon Cho, Jung-Shin Lee
    Nucleic Acids Research.2025;[Epub]     CrossRef
  • Repurposing Poloxamers as Antimicrobial Agents: A Comprehensive Review of Mechanisms and Applications
    Sheila I. Peña Corona, Fabiola V. Borbolla‐Jiménez, Lorena Duarte‐Peña, Angélica Moreno, Luis E. Pérez‐Caltzontzin, María Luisa Del Prado‐Audelo, Alejandra Romero‐Montero, Maykel González‐Torres, Hernán Cortés, Hector Hernández‐Parra, Javad Sharifi‐Rad, G
    Drug Development Research.2025;[Epub]     CrossRef
  • Acridine Derivatives as Antifungal and Antivirulence Agents Against Candida albicans
    Amra Yunus, Oluwatosin Oluwaseun Faleye, Jin-Hyung Lee, Jintae Lee
    International Journal of Molecular Sciences.2025; 26(15): 7228.     CrossRef
  • Chitosan nanoparticles loaded with ribavirin, carboplatin, and thyme oil downregulate SNQ2, ERG11, CDR1, and MDR1 in Candida strains
    Shima Aghaei, Mohammad Hossein Yadegari, Masoumeh Rajabibazl, Saham Ansari, Jafar Amani
    Scientific Reports.2025;[Epub]     CrossRef
  • Mutanobactin D from the Human Microbiome: Chemistry, Biology, and Molecular Dynamics Studies
    Patricia Brandl, Lukas Lüthy, Felix Pultar, Moritz E. Hansen, Nicola Jelmini, Justin Faris, Samuel O. Yasmin, Anna S. Kamenik, René Arnold, Marc-Olivier Ebert, Susanne Wolfrum, R. Scott Lokey, Sereina Riniker, Erick M. Carreira
    Journal of the American Chemical Society.2025; 147(47): 43330.     CrossRef
  • A Randomized Trial in Older Adults of a Flavor-Enhanced Coconut Oil-Based Mouthwash: Clinical Safety, Antimicrobial Efficacy, and User Satisfaction
    Arpasiri Soodsakorn, Wantida Chaiyana, Jitjiroj Ittichaicharoen, Phenphichar Wanachantararak, Marut Wongtapin, Siriwoot Sookkhee, Darunee Owittayakul
    Healthcare.2025; 13(22): 2941.     CrossRef
  • Exploring alternative therapeutic strategies against drug-resistant Candida albicans for immunocompromised patients
    Satadru Ghosh, Suranjana Sarkar, Pramita Garai, Arpan Kumar Maiti, Nimai Chandra Saha, Priyajit Banerjee
    Discover Applied Sciences.2025;[Epub]     CrossRef
  • Harnessing Probiotics to Combat Candidiasis: Mechanisms, Evidence, and Future Directions
    Emma Wright, Nisha Valand, Umakhanth Venkatraman Girija
    Journal of Fungi.2025; 11(11): 779.     CrossRef
  • Revisiting threats associated with neglected and emerging fungal pathogens in sub-Saharan Africa
    Saheed Adekunle Akinola, Rasheed Omotayo Adeyemo, Muritala Issa Bale, Emmanuel Eilu, Adam Moyosore Afodun, Robiah Ajoke Abdulrahman Akinola, Michael Olubusayo Binuyo, Saidi Odoma, Ibrahim Eleha Suleiman, Taofeek Tope Adegboyega, Ismail Abiola Adebayo
    Discover Public Health.2024;[Epub]     CrossRef
  • Copper Nanoparticles Reduce Expression of Key Virulence Genes in Vaginal Candida albicans Infection: Implications for Novel Antifungal Therapies
    Mahmoud Hassan Shahryari, Roudabeh Behzadi Andouhjerdi, Mehrnoosh Hasan Shahriari
    Journal of Medical Microbiology and Infectious Diseases.2024; 12(1): 35.     CrossRef
  • Antifungal drug resistance in Candida: a special emphasis on amphotericin B
    Lailema Ahmady, Manisha Gothwal, Muhammed Mushthaque Mukkoli, Vinay Kumar Bari
    APMIS.2024; 132(5): 291.     CrossRef
  • Fabrication of miconazole nitrate solid lipid nanoparticle loaded microneedle patches for the treatment of Candida albicans biofilms
    Muhammad Sohail Arshad, Aqsa Ayub, Saman Zafar, Sadia Jafar Rana, Syed Aun Muhammad, Ambreen Aleem, Ekhoerose Onaiwu, Kazem Nazari, Ming-Wei Chang, Zeeshan Ahmad
    RSC Pharmaceutics.2024; 1(3): 458.     CrossRef
  • Vaginal Yeast Infections: Causes, Symptoms, Diagnosis, and Treatment
    Vaishnavi H. Mishra
    Journal of Preventive, Diagnostic and Treatment Strategies in Medicine.2024; 3(4): 303.     CrossRef
  • Effect of the Sho1 gene on the pathogenicity of Candida albicans and immune function in vivo
    Mengyan Li, Hua Wang, Huihai Zhao, Mengyu Jiang, Mengge Cui, Keran Jia, Daxin Lei, Fukun Wang
    Heliyon.2024; 10(19): e38219.     CrossRef
  • Optimization of the antifungal properties of the bacterial peptide EntV by variant analysis
    Shantanu Guha, Shane A. Cristy, Giuseppe Buda De Cesare, Melissa R. Cruz, Michael C. Lorenz, Danielle A. Garsin, Judith Berman
    mBio.2024;[Epub]     CrossRef
  • Comparative antimicrobial evaluation of synthetic antibiotics and essential oils against human pathogenic bacteria and fungi
    Ayman Khaliq, Akhilesh Kumar Mishra, Ahmad Rabbani
    Innovations in Agriculture.2024; 7: 1.     CrossRef
  • Transcriptomic meta-analysis to identify potential antifungal targets in Candida albicans
    Zeinab Abdelmoghis Hefny, Boyang Ji, Ibrahim E. Elsemman, Jens Nielsen, Patrick Van Dijck
    BMC Microbiology.2024;[Epub]     CrossRef
  • Investigation of biological activities of essential oil obtained from peel of wild orange in Quang Ngai by steam distillation
    Quynh-Anh Phan-Nguyen, Thien-Thu Tran-Le, Huy-Hoang Nguyen, Vu-Ha Le
    IOP Conference Series: Earth and Environmental Science.2024; 1340(1): 012024.     CrossRef
  • Candida albicans pathways that protect against organic peroxides and lipid peroxidation
    Kara A. Swenson, Kyunghun Min, James B. Konopka, Aaron P. Mitchell
    PLOS Genetics.2024; 20(10): e1011455.     CrossRef
  • Implications of innate lymphoid cells in oral diseases
    Si-Ting Hu, Gang Zhou, Jing Zhang
    International Immunopharmacology.2024; 133: 112122.     CrossRef
  • The Role of Fungi in Food Production and Processing
    John Pouris, Foteini Kolyva, Spyridoula Bratakou, Chrysovalantou Argyro Vogiatzi, Dimitrios Chaniotis, Apostolos Beloukas
    Applied Sciences.2024; 14(12): 5046.     CrossRef
  • Insights into the role of sphingolipids in antifungal drug resistance
    Sapna Kalra, Sunita Tanwar, Vinay Kumar Bari
    Fungal Biology Reviews.2024; 47: 100342.     CrossRef
  • Toxoplasma-induced behavior changes - is microbial dysbiosis the missing link?
    Emese Prandovszky, Emily G. Severance, Victor W. Splan, Hua Liu, Jianchun Xiao, Robert H. Yolken
    Frontiers in Cellular and Infection Microbiology.2024;[Epub]     CrossRef
  • En god vaginalflora beskytter også det ufødte barnet
    Jörn Klein
    Sykepleien.2024; (96146): e.     CrossRef
  • Fatliquor for fungus resistant leather-a sustainable ecofriendly approach
    Md. Abdur Razzaq, Chadni Lyzu, Sahana Parveen, Md. Tushar Uddin, Md. Aftab Ali Shaikh, Murshid Jaman Chowdhury, A. H. M. Shofiul Islam Molla Jamal, Muhammad Abdullah Al-Mansur
    Heliyon.2024; 10(11): e31598.     CrossRef
  • Red/Orange Autofluorescence in Selected Candida Strains Exposed to 405 nm Laser Light
    Rafał Wiench, Dariusz Paliga, Anna Mertas, Elżbieta Bobela, Anna Kuśka-Kiełbratowska, Sonia Bordin-Aykroyd, Aleksandra Kawczyk-Krupka, Kinga Grzech-Leśniak, Monika Lukomska-Szymanska, Edward Lynch, Dariusz Skaba
    Dentistry Journal.2024; 12(3): 48.     CrossRef
  • Candida albicans cells exhibit media specific proteomic profiles during induction of filamentation
    Legros Véronique, Albanese Véronique, Chevreux Guillaume, Camadro Jean-Michel, Auchère Françoise
    BMC Microbiology.2024;[Epub]     CrossRef
  • A fungal metabolic regulator underlies infectious synergism during Candida albicans-Staphylococcus aureus intra-abdominal co-infection
    Saikat Paul, Olivia A. Todd, Kara R. Eichelberger, Christine Tkaczyk, Bret R. Sellman, Mairi C. Noverr, James E. Cassat, Paul L. Fidel, Brian M. Peters
    Nature Communications.2024;[Epub]     CrossRef
  • The role of infections and inflammation in schizophrenia: review of the evidence
    Gellan K. Ahmed, Haidi Karam-Allah Ramadan, Khaled Elbeh, Nourelhoda A. Haridy
    Middle East Current Psychiatry.2024;[Epub]     CrossRef
  • Isotope labeled 3D-Raman confocal imaging and atomic force microscopy study on epithelial cells interacting with the fungus Candida albicans
    Sarmiza Elena Stanca, Selene Mogavero, Wolfgang Fritzsche, Christoph Krafft, Bernhard Hube, Jürgen Popp
    Nanomedicine: Nanotechnology, Biology and Medicine.2024; 59: 102750.     CrossRef
  • Potential Anti-Candida albicans Mechanism of Trichoderma Acid from Trichoderma spirale
    Wei Ye, Yuchan Chen, Weimin Zhang, Taomei Liu, Yuping Liu, Mengran Li, Saini Li, Liqiong Xu, Hongxin Liu
    International Journal of Molecular Sciences.2023; 24(6): 5445.     CrossRef
  • Black-eyed Susan vine (Thunbergia alata): chemical and antifungal potential evaluation of an invasive plant species in Colombia
    Miguel Ángel Vanegas Romero, Luis Carlos Chitiva, Claudia Patrícia Bravo-Chaucanés, Andrea Ximena Hernández, Claudia Marcela Parra-Giraldo, Geison Modesti Costa
    Universitas Scientiarum.2023; 28(2): 217.     CrossRef
  • Biosensor-Enabled Discovery of CaERG6 Inhibitors and Their Antifungal Mode of Action against Candida albicans
    Zhan Liu, Yi Li, Daijing Wei, Jing Wang, Chong Qiao, Guo-you Li, Guolin Zhang, Yinggang Luo
    ACS Infectious Diseases.2023; 9(4): 785.     CrossRef
  • The genomes of Scedosporium between environmental challenges and opportunism
    Francesco Venice, Federica Spina, Domenico Davolos, Stefano Ghignone, Giovanna Cristina Varese
    IMA Fungus.2023;[Epub]     CrossRef
  • Molecular Detection of Candida albicans Virulence Genes That Isolated from Periodontitis Patients in Al-Hillah City
    Ali A. Obais, Maysaa S.M. Al-shukri, Abeer Fauzi M. Al-Rubaye
    Medical Journal of Babylon.2023; 20(2): 347.     CrossRef
  • Anti-Candida albicans Effects and Mechanisms of Theasaponin E1 and Assamsaponin A
    Yuhong Chen, Ying Gao, Mingan Yuan, Zhaisheng Zheng, Junfeng Yin
    International Journal of Molecular Sciences.2023; 24(11): 9350.     CrossRef
  • Remodeling articular immune homeostasis with an efferocytosis-informed nanoimitator mitigates rheumatoid arthritis in mice
    Shengchang Zhang, Ying Liu, Weiqiang Jing, Qihao Chai, Chunwei Tang, Ziyang Li, Zhentao Man, Chen Chen, Jing Zhang, Peng Sun, Rui Zhang, Zhenmei Yang, Maosen Han, Yan Wang, Xia Wei, Jun Li, Wei Li, Mohnad Abdalla, Gongchang Yu, Bin Shi, Yuankai Zhang, Kun
    Nature Communications.2023;[Epub]     CrossRef
  • Farnesol and phosphorylation of the transcriptional regulator Efg1 affect Candida albicans white-opaque switching rates
    Lucas R. Brenes, Alexander D. Johnson, Matthew B. Lohse, Roy Aziz Khalaf
    PLOS ONE.2023; 18(1): e0280233.     CrossRef
  • Design, synthesis and in vitro biological studies of novel triazoles with potent and broad-spectrum antifungal activity
    Junhe Bao, Yumeng Hao, Tingjunhong Ni, Ruina Wang, Jiacun Liu, Xiaochen Chi, Ting Wang, Shichong Yu, Yongsheng Jin, Lan Yan, Xiaomei Li, Dazhi Zhang, Fei Xie
    Journal of Enzyme Inhibition and Medicinal Chemistry.2023;[Epub]     CrossRef
  • Amino acid substitutions in specific proteins correlate with farnesol unresponsiveness in Candida albicans
    Sima Mohammadi, Annie Leduc, Steve J. Charette, Jean Barbeau, Antony T. Vincent
    BMC Genomics.2023;[Epub]     CrossRef
  • Antifungal Activity of Plant Secondary Metabolites on Candida albicans: An Updated Review
    Andleeb Khan, Sivakumar Sivagurunathan Moni, M. Ali, Syam Mohan, Huma Jan, Saiema Rasool, Mohammad A Kamal, Saeed Alshahrani, Maryam Halawi, Hassan A Alhazmi
    Current Molecular Pharmacology.2023; 16(1): 15.     CrossRef
  • Nisin and its application in oral diseases
    Ka Teng Chan, Xin Song, Leyao Shen, Nian Liu, Xuedong Zhou, Lei Cheng, Jing Chen
    Journal of Functional Foods.2023; 105: 105559.     CrossRef
  • Alteration of Azole-Resistant Candida albicans Cell Permeability by a Flavonoid from Dalea elegans
    Milagros Muthular, Pablo Passero, María Eugenia Gómez Casati, Valeria Miozza, Cristina Pérez
    Jentashapir Journal of Cellular and Molecular Biology.2023;[Epub]     CrossRef
  • Rewilding of laboratory mice enhances granulopoiesis and immunity through intestinal fungal colonization
    Ying-Han Chen, Frank Yeung, Keenan A. Lacey, Kimberly Zaldana, Jian-Da Lin, Gavyn Chern Wei Bee, Caroline McCauley, Ramya S. Barre, Shen-Huan Liang, Christina B. Hansen, Alexander E. Downie, Kyle Tio, Jeffrey N. Weiser, Victor J. Torres, Richard J. Bennet
    Science Immunology.2023;[Epub]     CrossRef
  • Novel itraconazole nano-spanlastics gel with enhanced penetration to treat topical fungal infection
    Sumeet S. Dhakane, Ashlesha P. Pandit
    Journal of Drug Delivery Science and Technology.2023; 90: 105093.     CrossRef
  • Inhibitory effect of lactobacilli supernatants on biofilm and filamentation of Candida albicans, Candida tropicalis, and Candida parapsilosis
    Yeuklan Poon, Mamie Hui
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Reviving the interest in the versatile drug nystatin: A multitude of strategies to increase its potential as an effective and safe antifungal agent
    Filipa Sousa, Cecília Nascimento, Domingos Ferreira, Salette Reis, Paulo Costa
    Advanced Drug Delivery Reviews.2023; 199: 114969.     CrossRef
  • Variation in transcription regulator expression underlies differences in white–opaque switching between the SC5314 reference strain and the majority of Candida albicans clinical isolates
    Matthew B Lohse, Naomi Ziv, Alexander D Johnson, L Cowen
    GENETICS.2023;[Epub]     CrossRef
  • Controlling the toxicity of biomass-derived difunctional molecules as potential pharmaceutical ingredients for specific activity toward microorganisms and mammalian cells
    Hochan Chang, Douglas H. Chang, Alexios G. Stamoulis, George W. Huber, David M. Lynn, Sean P. Palecek, James A. Dumesic
    Green Chemistry.2023; 25(14): 5416.     CrossRef
  • Functional Clustering of Metabolically Related Genes Is Conserved across Dikarya
    Gina M. Cittadino, Johnathan Andrews, Harpreet Purewal, Pedro Estanislao Acuña Avila, James T. Arnone
    Journal of Fungi.2023; 9(5): 523.     CrossRef
  • Rapid and precise identification of bloodstream infections using a pre-treatment protocol combined with high-throughput multiplex genetic detection system
    Jinghao Zhang, Feng Yang, Zhaoyang Sun, Yi Fang, Haowei Zhu, Dijun Zhang, Xianping Zeng, Wenjian Liu, Tao Liu, Yixin Liu, Wenjing Chi, Su Wang, Li Ding, Yong Wu, Yanmei Zhang, Hu Zhao
    BMC Infectious Diseases.2022;[Epub]     CrossRef
  • Antioxidant and Antimicrobial Activities of Erodium arborescens Aerial Part Extracts and Characterization by LC-HESI-MS2 of Its Acetone Extract
    Sonda Samet, Amani Ayachi, Mariam Fourati, Lotfi Mallouli, Noureddine Allouche, Michel Treilhou, Nathan Téné, Raoudha Mezghani-Jarraya
    Molecules.2022; 27(14): 4399.     CrossRef
  • Evaluation of the mycobiome of ballast water and implications for fungal pathogen distribution
    WA Gerhard, DB Raudabaugh, JA Rojas, CK Gunsch
    Aquatic Microbial Ecology.2022; 88: 149.     CrossRef
  • Pomegranate Extract Potentiates the Anti-Demineralizing, Anti-Biofilm, and Anti-Inflammatory Actions of Non-Alcoholic Mouthwash When Associated with Sodium-Fluoride Trimetaphosphate
    Gabriela Lopes Fernandes, Ana Paula Miranda Vieira, Marcelle Danelon, Nayara Gonçalves Emerenciano, Andresa Aparecida Berretta, Andrei Felipe Moreira Buszinski, Juliana Issa Hori, Mikhael Haruo Fernandes de Lima, Thaila Fernanda dos Reis, Jessica Aparecid
    Antibiotics.2022; 11(11): 1477.     CrossRef
  • The prophylactic effects of monoclonal antibodies targeting the cell wall Pmt4 protein epitopes of Candida albicans in a murine model of invasive candidiasis
    Xiaojuan Wang, Peng Liu, Yuanying Jiang, Bing Han, Lan Yan
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • β-Glucan-Functionalized Nanoparticles Down-Modulate the Proinflammatory Response of Mononuclear Phagocytes Challenged with Candida albicans
    Tânia Lima, Stefán B. Gunnarsson, Elisabete Coelho, Dmitry V. Evtuguin, Alexandra Correia, Manuel A. Coimbra, Tommy Cedervall, Manuel Vilanova
    Nanomaterials.2022; 12(14): 2475.     CrossRef
  • Essential Oil and Supercritical Carbon Dioxide Extract of Grapefruit Peels Formulated for Candida albicans Infections: Evaluation by an in Vitro Model to Study Fungal–Host Interactions
    Burcu Yaldiz, Pelin Saglam-Metiner, Betul Cakmak, Elif Kaya, Buse Deliogullari, Ozlem Yesil-Celiktas
    ACS Omega.2022; 7(42): 37427.     CrossRef
  • Vaccines against candidiasis: Status, challenges and emerging opportunity
    Satya Ranjan Sahu, Swagata Bose, Manish Singh, Premlata Kumari, Abinash Dutta, Bhabasha Gyanadeep Utkalaja, Shraddheya Kumar Patel, Narottam Acharya
    Frontiers in Cellular and Infection Microbiology.2022;[Epub]     CrossRef
  • Multiple molecular events underlie stochastic switching between 2 heritable cell states in fungi
    Naomi Ziv, Lucas R. Brenes, Alexander Johnson, Joseph Heitman
    PLOS Biology.2022; 20(5): e3001657.     CrossRef
  • The effect of brotowali (Tinospora crispa L.) stem ethanolic extract on the inhibition of Candida albicans biofilm formation
    Suryani Hutomo, Christiane Marlene Sooai, Maria Silvia Merry, Ceny Gloria Larope, Haryo Dimasto Kristiyanto
    Dental Journal.2022; 55(1): 21.     CrossRef
  • Structural and functional investigation of ABC transporter STE6-2p from Pichia pastoris reveals unexpected interaction with sterol molecules
    E. Sabine M. Schleker, Sabine Buschmann, Hao Xie, Sonja Welsch, Hartmut Michel, Christoph Reinhart
    Proceedings of the National Academy of Sciences.2022;[Epub]     CrossRef
  • Isolation, identification and genotyping of Candida albicans from Landes geese
    Hongzhi Wang, Xudong Li, Dongxue Wang, Chong Li, Yuanyuan Wang, Youxiang Diao, Yi Tang
    Transboundary and Emerging Diseases.2022; 69(2): 349.     CrossRef
  • Molecular docking analysis of Allium chinense compounds as Secreted Aspartyl Proteinase-5 (SAP5) inhibitor
    A Hartanto, F G Naibaho, D Panjaitan, A Lutfia, E Munir
    IOP Conference Series: Earth and Environmental Science.2022; 977(1): 012017.     CrossRef
  • The mycobiome of the oral cavity in healthy dogs and dogs with periodontal disease
    Brook A. Niemiec, Jerzy Gawor, Shuiquan Tang, Aishani Prem, Janina A. Krumbeck
    American Journal of Veterinary Research.2022; 83(1): 42.     CrossRef
  • FunOMIC: Pipeline with built-in fungal taxonomic and functional databases for human mycobiome profiling
    Zixuan Xie, Chaysavanh Manichanh
    Computational and Structural Biotechnology Journal.2022; 20: 3685.     CrossRef
  • Investigation of the antimicrobial effects of carvacrol in clinical Candida isolates and imaging by immunoelectron microscopic method
    Bükay YENİCE GÜRSU
    Biological Diversity and Conservation.2022;[Epub]     CrossRef
  • The efficacy of organo-selenium conjugated cellulose polymer dressing to inhibit Candida albicans biofilm formation
    Unique Jacobo, Jonathan Kopel, John Reed, Shruti Patel, Suyash Jain, Phat Tran, Noureddine Abidi, Nicholas Bergfeld, Ted Reid
    Journal of Microbiological Methods.2022; 202: 106598.     CrossRef
  • A critical role of farnesol in the modulation of Amphotericin B and Aureobasidin A antifungal drug susceptibility
    Venkatramanan Mahendrarajan, Vinay Kumar Bari
    Mycology.2022; 13(4): 305.     CrossRef
  • Crosstalk between Body Microbiota and the Regulation of Immunity
    Carolina Rojas, Felipe Gálvez-Jirón, Javiera De Solminihac, Cristina Padilla, Ignacio Cárcamo, Natalia Villalón, Mónica Kurte, Karina Pino-Lagos, Zhipeng Xu
    Journal of Immunology Research.2022; 2022: 1.     CrossRef
  • Clinicopathological assessment of chronic hyperplastic candidasis
    Hussain S Hussain, Ban F Al-Drobie
    Journal of Baghdad College of Dentistry.2022; 34(4): 28.     CrossRef
  • Mapping the human gut mycobiome in middle-aged and elderly adults: multiomics insights and implications for host metabolic health
    Menglei Shuai, Yuanqing Fu, Hai-li Zhong, Wanglong Gou, Zengliang Jiang, Yuhui Liang, Zelei Miao, Jin-Jian Xu, Tien Huynh, Mark L Wahlqvist, Yu-ming Chen, Ju-Sheng Zheng
    Gut.2022; 71(9): 1812.     CrossRef
  • Inhibition of azole-resistant Candida albicans ATPase and oxidoreductase activity by a flavonoid from Dalea elegans
    Pablo Passero, Milagros Muthular, Sebastián Barceló, Valeria Miozza, Cristina Pérez
    Journal of Medical Mycology.2022; 32(2): 101247.     CrossRef
  • Usingin vivotranscriptomics and RNA enrichment to identify genes involved in virulence ofCandida glabrata
    Sanne Schrevens, Eric Durandau, Van Du T. Tran, Dominique Sanglard
    Virulence.2022; 13(1): 1285.     CrossRef
  • Metagenomic Assessment of the Pathogenic Risk of Microorganisms in Sputum of Postoperative Patients With Pulmonary Infection
    Junji Chen, Lianjie Sun, Xiaoying Liu, Qixiang Yu, Kaijie Qin, Xuejie Cao, Jianwei Gu
    Frontiers in Cellular and Infection Microbiology.2022;[Epub]     CrossRef
  • Allicin as a Volatile or Nebulisable Antimycotic for the Treatment of Pulmonary Mycoses: In Vitro Studies Using a Lung Flow Test Rig
    Christina Schier, Jana Foerster (née Reiter), Monika Heupel, Philipp Dörner, Michael Klaas, Wolfgang Schröder, Lothar Rink, Alan J. Slusarenko, Martin C. H. Gruhlke
    International Journal of Molecular Sciences.2022; 23(12): 6607.     CrossRef
  • Bioinformatics strategies for studying the molecular mechanisms of fungal extracellular vesicles with a focus on infection and immune responses
    Kandasamy Saravanakumar, Sugavaneswaran Siva Santosh, MohamedAli Afaan Ahamed, Anbazhagan Sathiyaseelan, Ghazala Sultan, Navabshan Irfan, Davoodbasha Mubarak Ali, Myeong-Hyeon Wang
    Briefings in Bioinformatics.2022;[Epub]     CrossRef
  • Interactions between Liquid Metal Droplets and Bacterial, Fungal, and Mammalian Cells
    Samuel Cheeseman, Aaron Elbourne, Sheeana Gangadoo, Z. L. Shaw, Saffron J. Bryant, Nitu Syed, Michael D. Dickey, Michael J. Higgins, Krasimir Vasilev, Chris F. McConville, Andrew J. Christofferson, Russell J. Crawford, Torben Daeneke, James Chapman, Vi Kh
    Advanced Materials Interfaces.2022;[Epub]     CrossRef
  • Proteomic profile of Candida albicans biofilm
    Mazen Abdulghani, Rasiqua Iram, Priti Chidrawar, Kajal Bhosle, Rubina Kazi, Rajendra Patil, Kiran Kharat, Gajanan Zore
    Journal of Proteomics.2022; 265: 104661.     CrossRef
  • Antibacterial and Antifungal Efficacy of Medium and Low Weight Chitosan-Shelled Nanodroplets for the Treatment of Infected Chronic Wounds
    Narcisa Mandras, Monica Argenziano, Mauro Prato, Janira Roana, Anna Luganini, Valeria Allizond, Vivian Tullio, Nicole Finesso, Sara Comini, Bruno Emilio Bressan, Francesca Pecoraro, Giuliana Giribaldi, Adriano Troia, Roberta Cavalli, Anna Maria Cuffini, G
    International Journal of Nanomedicine.2022; Volume 17: 1725.     CrossRef
  • Antimicrobial oxygen-loaded nanobubbles as promising tools to promote wound healing in hypoxic human keratinocytes
    Giuliana Banche, Valeria Allizond, Narcisa Mandras, Nicole Finesso, Anna Luganini, Tullio Genova, Monica Argenziano, Chiara Magnetto, Giulia Rossana Gulino, Janira Roana, Vivian Tullio, Giuliana Giribaldi, Roberta Cavalli, Rita Spagnolo, Adriano Troia, An
    Toxicology Reports.2022; 9: 154.     CrossRef
  • Combined impacts of various plant derivative extracts and lactic acid bacteria on yeasts to develop a nutritional bar with antifungal properties
    Reda Riešutė, Joana Šalomskienė, Alvija Šalaševičienė, Irena Mačionienė
    Food Bioscience.2022; 47: 101718.     CrossRef
  • The Role of Glycoside Hydrolases in S. gordonii and C. albicans Interactions
    Zhiyan Zhou, Biao Ren, Jiyao Li, Xuedong Zhou, Xin Xu, Yuan Zhou, Hideaki Nojiri
    Applied and Environmental Microbiology.2022;[Epub]     CrossRef
  • Efficacy of intravitreal povidone-iodine administration for the treatment of Candida albicans endophthalmitis in rabbits
    Seung Min Lee, Jong Ho Park, Su Youn Suh, Sang Min Lee, Iksoo Byon
    Experimental Eye Research.2021; 212: 108788.     CrossRef
  • The Vacuole and Mitochondria Patch (vCLAMP) Protein Mcp1 Is Involved in Maintenance of Mitochondrial Function and Mitophagy in Candida albicans
    Xiaolong Mao, Li Yang, Yiming Fan, Jiazhen Wang, Dongkai Cui, Dixiong Yu, Qilin Yu, Mingchun Li
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Therapeutic Effects of Shikonin on Skin Diseases: A Review
    Zhenzhen Mu, Jinrong Guo, Dongxia Zhang, Yuanyuan Xu, Mingming Zhou, Yimeng Guo, Yuzhu Hou, Xinghua Gao, Xiuping Han, Long Geng
    The American Journal of Chinese Medicine.2021; 49(08): 1871.     CrossRef
  • Genotyping, drug resistance and virulence factors of Candida species isolated from patients using long‐term inhaled steroids
    Nursel Dikmen, Nizami Duran, Emrah Ay, Funda Cimen, Erhan Tek
    International Journal of Clinical Practice.2021;[Epub]     CrossRef
  • Comparative evaluation of the antioxidant, antimicrobial and nutritive properties of gluten-free flours
    Joanna Miedzianka, Katarzyna Drzymała, Agnieszka Nemś, Agnieszka Kita
    Scientific Reports.2021;[Epub]     CrossRef
  • Structural Insights into the Azole Resistance of the Candida albicans Darlington Strain Using Saccharomyces cerevisiae Lanosterol 14α-Demethylase as a Surrogate
    Danyon O. Graham, Rajni K. Wilson, Yasmeen N. Ruma, Mikhail V. Keniya, Joel D. A. Tyndall, Brian C. Monk
    Journal of Fungi.2021; 7(11): 897.     CrossRef
  • RETRACTED: Development and Optimization of Luliconazole Spanlastics to Augment the Antifungal Activity against Candida albicans
    Nabil Alhakamy, Mohammed Al-Rabia, Shadab Md, Alaa Sirwi, Selwan Khayat, Sahar AlOtaibi, Raghad Hakami, Hadeel Al Sadoun, Basmah Eldakhakhny, Wesam Abdulaal, Hibah Aldawsari, Shaimaa Badr-Eldin, Mahmoud Elfaky
    Pharmaceutics.2021; 13(7): 977.     CrossRef
  • Development of Carbazole Derivatives Compounds against Candida albicans: Candidates to Prevent Hyphal Formation via the Ras1-MAPK Pathway
    Young-Kwang Park, Jisoo Shin, Hee-Yoon Lee, Hag-Dong Kim, Joon Kim
    Journal of Fungi.2021; 7(9): 688.     CrossRef
  • Targeted Drug Delivery Using Tuftsin-bearing Liposomes: Implications in the Treatment of Infectious Diseases and Tumors
    Masood Alam Khan
    Current Drug Targets.2021; 22(7): 770.     CrossRef
  • Effect of LongZhang Gargle on Dual‐Species Biofilm of Candida albicans and Streptococcus mutans
    Jinglei Gong, Die Hu, Jinzhi He, Ling Zou, Zhu Chen, Mingyun Li, Maria Bayliak
    BioMed Research International.2021;[Epub]     CrossRef
  • Synergistic activity of Pelargonium capitatum and Cymbopogon martini essential oils against C. albicans
    Letizia Angiolella
    Natural Product Research.2021; 35(24): 5997.     CrossRef
  • Efg1 and Cas5 Orchestrate Cell Wall Damage Response to Caspofungin in Candida albicans
    Kang Xiong, Chang Su, Qiangqiang Sun, Yang Lu
    Antimicrobial Agents and Chemotherapy.2021;[Epub]     CrossRef
  • Antimicrobial Activities of Propolis in Poloxamer Based Topical Gels
    Seong-Hyeon An, Eunmi Ban, In-Young Chung, You-Hee Cho, Aeri Kim
    Pharmaceutics.2021; 13(12): 2021.     CrossRef
  • Impeding Virulence of Candida albicans by Candesartan and Domperidone
    Hisham A. Abbas, Amany I. Gad, Mona A. El-Sayed, Amira M. El-Ganiny
    Current Microbiology.2021; 78(11): 3957.     CrossRef
  • Rapid proliferation due to better metabolic adaptation results in full virulence of a filament-deficient Candida albicans strain
    Christine Dunker, Melanie Polke, Bianca Schulze-Richter, Katja Schubert, Sven Rudolphi, A. Elisabeth Gressler, Tony Pawlik, Juan P. Prada Salcedo, M. Joanna Niemiec, Silvia Slesiona-Künzel, Marc Swidergall, Ronny Martin, Thomas Dandekar, Ilse D. Jacobsen
    Nature Communications.2021;[Epub]     CrossRef
  • Verapamil inhibits efflux pumps in Candida albicans, exhibits synergism with fluconazole, and increases survival of Galleria mellonella
    Yuliana Vega-Chacón, Maria Carolina de Albuquerque, Ana Cláudia Pavarina, Gustavo Henrique Goldman, Ewerton Garcia de Oliveira Mima
    Virulence.2021; 12(1): 231.     CrossRef
  • Microbial Interkingdom Biofilms and the Quest for Novel Therapeutic Strategies
    Katrien Van Dyck, Rita M. Pinto, Durgasruthi Pully, Patrick Van Dijck
    Microorganisms.2021; 9(2): 412.     CrossRef
  • Dimorphic Mechanism on cAMP Mediated Signal Pathway in Mucor circinelloides
    Maki Moriwaki-Takano, Ryo Iwakura, Kazuhiro Hoshino
    Applied Biochemistry and Biotechnology.2021; 193(5): 1252.     CrossRef
  • Raman Imaging of Pathogenic Candida auris: Visualization of Structural Characteristics and Machine-Learning Identification
    Giuseppe Pezzotti, Miyuki Kobara, Tenma Asai, Tamaki Nakaya, Nao Miyamoto, Tetsuya Adachi, Toshiro Yamamoto, Narisato Kanamura, Eriko Ohgitani, Elia Marin, Wenliang Zhu, Ichiro Nishimura, Osam Mazda, Tetsuo Nakata, Koichi Makimura
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Hijacking Transposable Elements for Saturation Mutagenesis in Fungi
    Sanne Schrevens, Dominique Sanglard
    Frontiers in Fungal Biology.2021;[Epub]     CrossRef
  • Systematic Analysis of the Lysine Crotonylome and Multiple Posttranslational Modification Analysis (Acetylation, Succinylation, and Crotonylation) in Candida albicans
    Xiaowei Zhou, Nana Song, Dongmei Li, Xiaofang Li, Weida Liu, David Fenyo
    mSystems.2021;[Epub]     CrossRef
  • Retrospective assessment of fungal pathogens isolated from various clinical samples in a tertiary care hospital in Turkey: A cross-sectional study
    Meryem ÇOLAK, Nergis AŞGIN
    Journal of Surgery and Medicine.2021; 5(4): 362.     CrossRef
  • Insights into the activation of oral keratinocyte cell death by Candida albicans and Staphylococcus aureus biofilms
    Kassia de Carvalho Dias, Paula Aboud Barbugli, Carlos Eduardo Vergani
    Biofouling.2021; 37(9-10): 975.     CrossRef
  • Mucoadhesive gellan gum hydrogel containing diphenyl diselenide-loaded nanocapsules presents improved anti-candida action in a mouse model of vulvovaginal candidiasis
    Estevan Sonego Zimmermann, Luana Mota Ferreira, Laura Bedin Denardi, Marcel Henrique Marcondes Sari, Verônica Ferrari Cervi, Cristina Wayne Nogueira, Sydney Hartz Alves, Letícia Cruz
    European Journal of Pharmaceutical Sciences.2021; 167: 106011.     CrossRef
  • Mechanisms to reduce the cytotoxicity of pharmacological nicotinamide concentrations in the pathogenic fungus Candida albicans
    Rahul Ghugari, Sarah Tsao, Mark Schmidt, Éric Bonneil, Charles Brenner, Alain Verreault
    The FEBS Journal.2021; 288(11): 3478.     CrossRef
  • How does temperature trigger biofilm adhesion and growth in Candida albicans and two non‐Candida albicans Candida species?
    Debora Casagrande Pierantoni, Laura Corte, Arturo Casadevall, Vincent Robert, Gianluigi Cardinali, Carlo Tascini
    Mycoses.2021; 64(11): 1412.     CrossRef
  • Chitosan hydrogel loaded with recombinant protein containing epitope C from HSP90 of Candida albicans induces protective immune responses against systemic candidiasis
    Xiaozhou Li, Ye Yang, Fan Yang, Feihe Wang, Hong Li, Huayu Tian, Guiyun Wang
    International Journal of Biological Macromolecules.2021; 173: 327.     CrossRef
  • Applying Cryo-X-ray Photoelectron Spectroscopy to Study the Surface Chemical Composition of Fungi and Viruses
    Andrey Shchukarev, Emelie Backman, Samuel Watts, Stefan Salentinig, Constantin F. Urban, Madeleine Ramstedt
    Frontiers in Chemistry.2021;[Epub]     CrossRef
  • Immunomodulatory mechanism of Bacillus subtilis R0179 in RAW 264.7 cells against Candida albicans challenge
    Weiwei Zhao, Xu Wang, Chen Zhao, Zhimin Yan
    Microbial Pathogenesis.2021; 157: 104988.     CrossRef
  • Rational Design of an Antifungal Polyacrylamide Library with Reduced Host-Cell Toxicity
    Sebastian Schaefer, Thi Thu Phuong Pham, Sascha Brunke, Bernhard Hube, Kenward Jung, Megan Denise Lenardon, Cyrille Boyer
    ACS Applied Materials & Interfaces.2021; 13(23): 27430.     CrossRef
  • A Liquid Metal Mediated Metallic Coating for Antimicrobial and Antiviral Fabrics
    Ki Yoon Kwon, Samuel Cheeseman, Alba Frias‐De‐Diego, Haeleen Hong, Jiayi Yang, Woojin Jung, Hong Yin, Billy J. Murdoch, Frank Scholle, Nathan Crook, Elisa Crisci, Michael D. Dickey, Vi Khanh Truong, Tae‐il Kim
    Advanced Materials.2021;[Epub]     CrossRef
  • mDrop-Seq: Massively Parallel Single-Cell RNA-Seq of Saccharomyces cerevisiae and Candida albicans
    Ryan Dohn, Bingqing Xie, Rebecca Back, Alan Selewa, Heather Eckart, Reeta Prusty Rao, Anindita Basu
    Vaccines.2021; 10(1): 30.     CrossRef
  • Effect of yeasts on food quality and safety and possibilities of their inhibition
    Reda Riesute, Joana Salomskiene, David Saez Moreno, Sonata Gustiene
    Trends in Food Science & Technology.2021; 108: 1.     CrossRef
  • Human inborn errors of immunity underlying superficial or invasive candidiasis
    Anne Puel
    Human Genetics.2020; 139(6-7): 1011.     CrossRef
  • Ospemifene displays broad-spectrum synergistic interactions with itraconazole through potent interference with fungal efflux activities
    Hassan E. Eldesouky, Ehab A. Salama, Tony R. Hazbun, Abdelrahman S. Mayhoub, Mohamed N. Seleem
    Scientific Reports.2020;[Epub]     CrossRef
  • Wss1 homolog from Candida albicans and its role in DNA–protein crosslink tolerance
    Aimorn Homchan, Juthamas Sukted, Skorn Mongkolsuk, David Jeruzalmi, Oranart Matangkasombut, Danaya Pakotiprapha
    Molecular Microbiology.2020; 114(3): 409.     CrossRef
  • Broad-Spectrum Antimicrobial and Antibiofilm Activity of a Natural Clay Mineral from British Columbia, Canada
    Shekooh Behroozian, Sarah L. Svensson, Loretta Y. Li, Julian E. Davies, Pascale F. Cossart
    mBio.2020;[Epub]     CrossRef
  • An Opaque Cell-Specific Expression Program of Secreted Proteases and Transporters Allows Cell-Type Cooperation inCandida albicans
    Matthew B Lohse, Lucas R Brenes, Naomi Ziv, Michael B Winter, Charles S Craik, Alexander D Johnson
    Genetics.2020; 216(2): 409.     CrossRef
  • The battle against biofilm infections: juglone loaded nanoparticles as an anticandidal agent
    Busra Gumus, Tayfun Acar, Tugba Atabey, Serap Derman, Fikrettin Sahin, Tulin Arasoglu
    Journal of Biotechnology.2020; 316: 17.     CrossRef
  • The effect of glucose and human serum on 5-aminolevulinic acid mediated photodynamic inactivation of Candida albicans
    Irena Maliszewska, Dominika Wawrzyńczyk, Ewelina Wanarska
    Photodiagnosis and Photodynamic Therapy.2020; 29: 101623.     CrossRef
  • Candida Species (Volatile) Metabotyping through Advanced Comprehensive Two‐Dimensional Gas Chromatography
    Carina Pedrosa Costa, Ana Rita Bezerra, Adelaide Almeida, Sílvia M. Rocha
    Microorganisms.2020; 8(12): 1911.     CrossRef
  • In Situ Imaging of Candida albicans Hyphal Growth via Atomic Force Microscopy
    Arzu Çolak, Mélanie A. C. Ikeh, Clarissa J. Nobile, Mehmet Z. Baykara, Michael Lorenz
    mSphere.2020;[Epub]     CrossRef
  • Chemical Characterization of Lavandula dentata Essential Oil Cultivated in Chile and Its Antibiofilm Effect against Candida albicans
    Andrea Müller-Sepúlveda, Camila Cid Chevecich, José A. Jara, Carolina Belmar, Pablo Sandoval, Rocío Santander Meyer, Raúl Quijada, Sidnei Moura, Rodrigo López-Muñoz, Mario Díaz-Dosque, Alfredo Molina-Berríos
    Planta Medica.2020; 86(16): 1225.     CrossRef
  • In vitro efficacy of the lipopeptide biosurfactant surfactin-C15 and its complexes with divalent counterions to inhibit Candida albicans biofilm and hyphal formation
    Tomasz Janek, Katarzyna Drzymała, Adam Dobrowolski
    Biofouling.2020; 36(2): 210.     CrossRef
  • Caenorhabditis elegans as a model animal for investigating fungal pathogenesis
    Moses Madende, Jacobus Albertyn, Olihile Sebolai, Carolina H. Pohl
    Medical Microbiology and Immunology.2020; 209(1): 1.     CrossRef
  • The Interactions between the Antimicrobial Peptide P-113 and Living Candida albicans Cells Shed Light on Mechanisms of Antifungal Activity and Resistance
    Kuang-Ting Cheng, Chih-Lung Wu, Bak-Sau Yip, Ya-Han Chih, Kuang-Li Peng, Su-Ya Hsu, Hui-Yuan Yu, Jya-Wei Cheng
    International Journal of Molecular Sciences.2020; 21(7): 2654.     CrossRef
  • Anandamide prevents the adhesion of filamentous Candida albicans to cervical epithelial cells
    Ronit Vogt Sionov, Mark Feldman, Reem Smoum, Raphael Mechoulam, Doron Steinberg
    Scientific Reports.2020;[Epub]     CrossRef
  • Proteomics Analysis of Candida albicans dnm1 Haploid Mutant Unraveled the Association between Mitochondrial Fission and Antifungal Susceptibility
    Thuyen Truong, Guisheng Zeng, Teck Kwang Lim, Tong Cao, Li Mei Pang, Yew Mun Lee, Qingsong Lin, Yue Wang, Chaminda Jayampath Seneviratne
    PROTEOMICS.2020;[Epub]     CrossRef
  • Combination of Antifungal Drugs and Protease Inhibitors Prevent Candida albicans Biofilm Formation and Disrupt Mature Biofilms
    Matthew B. Lohse, Megha Gulati, Charles S. Craik, Alexander D. Johnson, Clarissa J. Nobile
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • A novel, quorum sensor-infused liposomal drug delivery system suppresses Candida albicans biofilms
    H.M.H.N. Bandara, A.K. Hewavitharana, P.N. Shaw, H.D.C. Smyth, L.P. Samaranayake
    International Journal of Pharmaceutics.2020; 578: 119096.     CrossRef
  • A Screen for Small Molecules to Target Candida albicans Biofilms
    Matthew B. Lohse, Craig L. Ennis, Nairi Hartooni, Alexander D. Johnson, Clarissa J. Nobile
    Journal of Fungi.2020; 7(1): 9.     CrossRef
  • Rapid method for chromatin immunoprecipitation (ChIP) assay in a dimorphic fungus, Candida albicans
    Jueun Kim, Jung-Shin Lee
    Journal of Microbiology.2020; 58(1): 11.     CrossRef
  • Orchestrated actin nucleation by the Candida albicans polarisome complex enables filamentous growth
    Ying Xie, Zhi Yang Loh, Jiao Xue, Feng Zhou, Jialin Sun, Zhu Qiao, Shengyang Jin, Yinyue Deng, Hongye Li, Yue Wang, Lanyuan Lu, Yonggui Gao, Yansong Miao
    Journal of Biological Chemistry.2020; 295(44): 14840.     CrossRef
  • A Set of Diverse Genes Influence the Frequency of White-Opaque Switching in Candida albicans
    Lucas R Brenes, Matthew B Lohse, Nairi Hartooni, Alexander D Johnson
    G3 Genes|Genomes|Genetics.2020; 10(8): 2593.     CrossRef
  • Repurposing of respiratory drug theophylline againstCandida albicans: mechanistic insights unveil alterations in membrane properties and metabolic fitness
    S. Singh, Z. Fatima, K. Ahmad, S. Hameed
    Journal of Applied Microbiology.2020; 129(4): 860.     CrossRef
  • Evaluation of Susceptibility and Innate Immune Response in C57BL/6 and BALB/c Mice DuringCandida albicansEndophthalmitis
    Bruce G. Rottmann, Pawan Kumar Singh, Sneha Singh, Sanjay G. Revankar, Pranatharthi H. Chandrasekar, Ashok Kumar
    Investigative Opthalmology & Visual Science.2020; 61(11): 31.     CrossRef
  • Effect of ethanolic extract of Zataria multiflora Boiss (Shiraz thyme extract) on the kidney and spleen tissues of mice infected with visceral candidiasis and the stimulation of Th1, Th17, and Treg immune cells
    Mansour Bayat, Niloofar Hassannejad, Hadi Ghazanfari
    Reviews in Medical Microbiology.2020; 31(4): 201.     CrossRef
  • Protective effect of fungal extracellular vesicles against murine candidiasis
    Gabriele Vargas, Leandro Honorato, Allan Jefferson Guimarães, Marcio L. Rodrigues, Flavia C. G. Reis, André M. Vale, Anjana Ray, Joshua Daniel Nosanchuk, Leonardo Nimrichter
    Cellular Microbiology.2020;[Epub]     CrossRef
  • Expression, purification, and characterization of phospholipase B1 from Candida albicans in Escherichia coli
    Zigang Zhao, Yaguang Zhou, Rui Wang, Fang Xie, Zhengyuan Zhai
    3 Biotech.2020;[Epub]     CrossRef
  • Can Leaves and Stems of Rubus idaeus L. Handle Candida albicans Biofilms?
    Clément Bernard, Camille Juin, Marine Vitry, Van Thanh Danh Le, Julien Verdon, Anne-Solène Toullec, Christine Imbert, Marion Girardot
    Pharmaceuticals.2020; 13(12): 477.     CrossRef
  • Mannan detecting C-type lectin receptor probes recognise immune epitopes with diverse chemical, spatial and phylogenetic heterogeneity in fungal cell walls
    Ingrida Vendele, Janet A. Willment, Lisete M. Silva, Angelina S. Palma, Wengang Chai, Yan Liu, Ten Feizi, Maria Spyrou, Mark H. T. Stappers, Gordon D. Brown, Neil A. R. Gow, Tobias M. Hohl
    PLOS Pathogens.2020; 16(1): e1007927.     CrossRef
  • Unambiguous determination of farnesol and tyrosol in vaginal fluid using fast and sensitive UHPLC-MS/MS method
    Veronika Pilařová, Hana Kočová Vlčková, Ondřej Jung, Michele Protti, Vladimír Buchta, Laura Mercolini, Frantisek Svec, Lucie Nováková
    Analytical and Bioanalytical Chemistry.2020; 412(24): 6529.     CrossRef
  • A Review of Dental Composites: Methods of Characterizations
    Alireza Aminoroaya, Rasoul Esmaeely Neisiany, Saied Nouri Khorasani, Parisa Panahi, Oisik Das, Seeram Ramakrishna
    ACS Biomaterials Science & Engineering.2020; 6(7): 3713.     CrossRef
  • Physicochemical and Mycological Examination of Groundwater (Well Water) in Rumuosi Community, Rivers State, Nigeria
    C.E.I. Nwankwo, P.N. Barika, N.P. Akani, O.N. Amadi
    Research Journal of Microbiology.2020; 15(3): 82.     CrossRef
  • A Selective Serotonin Reuptake Inhibitor, a Proton Pump Inhibitor, and Two Calcium Channel Blockers Inhibit Candida albicans Biofilms
    Clarissa J. Nobile, Craig L. Ennis, Nairi Hartooni, Alexander D. Johnson, Matthew B. Lohse
    Microorganisms.2020; 8(5): 756.     CrossRef
  • Fungistatic Action of N-Acetylcysteine on Candida albicans Biofilms and Its Interaction with Antifungal Agents
    Thaís Soares Bezerra Santos Nunes, Leticia Matheus Rosa, Yuliana Vega-Chacón, Ewerton Garcia de Oliveira Mima
    Microorganisms.2020; 8(7): 980.     CrossRef
  • Interactions of microorganisms with host mucins: a focus on Candida albicans
    Ashley Valle Arevalo, Clarissa J Nobile
    FEMS Microbiology Reviews.2020; 44(5): 645.     CrossRef
  • The LAMMER kinase is involved in morphogenesis and response to cell wall- and DNA-damaging stresses in Candida albicans
    Joo-Yeon Lim, Yun-Hee Park, Young-Hee Pyon, Ji-Min Yang, Ja-Young Yoon, Sun Joo Park, Hak Lee, Hee-Moon Park
    Medical Mycology.2019;[Epub]     CrossRef
  • Candida albicanscell wall integrity transcription factors regulate polymicrobial biofilm formation withStreptococcus gordonii
    Jennifer Chinnici, Lisa Yerke, Charlene Tsou, Sujay Busarajan, Ryan Mancuso, Nishanth D. Sadhak, Jaewon Kim, Abhiram Maddi
    PeerJ.2019; 7: e7870.     CrossRef
  • Exploiting the vulnerable active site of a copper-only superoxide dismutase to disrupt fungal pathogenesis
    Natalie G. Robinett, Edward M. Culbertson, Ryan L. Peterson, Hiram Sanchez, David R. Andes, Jeniel E. Nett, Valeria C. Culotta
    Journal of Biological Chemistry.2019; 294(8): 2700.     CrossRef
  • Anti-Candida albicans effect of the protein-carbohydrate fraction obtained from the coelomic fluid of earthworm Dendrobaena veneta
    Marta J. Fiołka, Paulina Czaplewska, Katarzyna Macur, Tomasz Buchwald, Jolanta Kutkowska, Roman Paduch, Zbigniew Kaczyński, Jerzy Wydrych, Teresa Urbanik-Sypniewska, Vijai Gupta
    PLOS ONE.2019; 14(3): e0212869.     CrossRef
  • New group of azastilbene analogs of resveratrol: Synthesis, anticandidal activity and toxicity evaluation
    Francislene Juliana Martins, Mônica Senra, César Augusto Caneschi, Juliana Alves dos Santos, Adilson David da Silva, Nádia Rezende Barbosa Raposo
    Journal of King Saud University - Science.2019; 31(2): 158.     CrossRef
  • Mechanical and Surface Properties of Resilient Denture Liners Modified with Chitosan Salts
    Maike Herla, Klaus Boening, Heike Meissner, Katarzyna Walczak
    Materials.2019; 12(21): 3518.     CrossRef
  • The Candida albicans biofilm gene circuit modulated at the chromatin level by a recent molecular histone innovation
    Laxmi Shanker Rai, Rima Singha, Hiram Sanchez, Tanmoy Chakraborty, Bipin Chand, Sophie Bachellier-Bassi, Shantanu Chowdhury, Christophe d’Enfert, David R. Andes, Kaustuv Sanyal, Harmit S. Malik
    PLOS Biology.2019; 17(8): e3000422.     CrossRef
  • Lycorine Hydrochloride Inhibits the Virulence Traits ofCandida albicans
    Longfei Yang, Xin Liu, Yujie Sui, Zhiming Ma, Xuechao Feng, Fang Wang, Tonghui Ma
    BioMed Research International.2019; 2019: 1.     CrossRef
  • Metabolic Rewiring Improves the Production of the Fungal Active Targeting Molecule Fusarinine C
    Yi Lu, Hongying Wang, Zhuangzhuang Wang, Ying Cong, Peng Zhang, Guanglei Liu, Chenguang Liu, Zhenming Chi, Zhe Chi
    ACS Synthetic Biology.2019; 8(8): 1755.     CrossRef
  • Candida albicans Augments Staphylococcus aureus Virulence by Engaging the StaphylococcalagrQuorum Sensing System
    Olivia A. Todd, Paul L. Fidel, Janette M. Harro, Jamese J. Hilliard, Christine Tkaczyk, Bret R. Sellman, Mairi C. Noverr, Brian M. Peters, Michael Lorenz
    mBio.2019;[Epub]     CrossRef
  • Cross‐talk between Tor1 and Sch9 regulates hyphae‐specific genes or ribosomal protein genes in a mutually exclusive manner inCandida albicans
    Se Woong Kim, Yoo Jin Joo, Yu Jin Chun, Young Kwang Park, Joon Kim
    Molecular Microbiology.2019; 112(3): 1041.     CrossRef
  • Fungal Extracellular Vesicles as Potential Targets for Immune Interventions
    Mateus Silveira Freitas, Vânia Luiza Deperon Bonato, Andre Moreira Pessoni, Marcio L. Rodrigues, Arturo Casadevall, Fausto Almeida, Aaron P. Mitchell
    mSphere.2019;[Epub]     CrossRef
  • The Host Immune System Facilitates Disseminated Staphylococcus aureus Disease Due to Phagocytic Attraction to Candida albicans during Coinfection: a Case of Bait and Switch
    Devon L. Allison, Nina Scheres, Hubertine M. E. Willems, Carolien S. Bode, Bastiaan P. Krom, Mark E. Shirtliff, Victor J. Torres
    Infection and Immunity.2019;[Epub]     CrossRef
  • Fractal analysis and mathematical models for the investigation of photothermal inactivation of Candida albicans using carbon nanotubes
    Kevin F. dos Santos, Marcos S. Sousa, João V.P. Valverde, Clarissa A. Olivati, Paula C.S Souto, Josmary R. Silva, Nara C. de Souza
    Colloids and Surfaces B: Biointerfaces.2019; 180: 393.     CrossRef
  • Whole Genome Analysis of Lactobacillus plantarum Strains Isolated From Kimchi and Determination of Probiotic Properties to Treat Mucosal Infections by Candida albicans and Gardnerella vaginalis
    Bo Ram Beck, Gun-Seok Park, Yong Hyun Lee, Sunghoon Im, Do Yeun Jeong, Jihee Kang
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Novel 2-indolinones containing a sulfonamide moiety as selective inhibitors ofcandidaβ-carbonic anhydrase enzyme
    Atilla Akdemir, Andrea Angeli, Füsun Göktaş, Pınar Eraslan Elma, Nilgün Karalı, Claudiu T. Supuran
    Journal of Enzyme Inhibition and Medicinal Chemistry.2019; 34(1): 528.     CrossRef
  • Sida hermaphrodita seeds as the source of anti - Candida albicans activity
    Kinga Lewtak, Marta J. Fiołka, Paulina Czaplewska, Katarzyna Macur, Zbigniew Kaczyński, Tomasz Buchwald, Ewa Szczuka, Jolanta Rzymowska
    Scientific Reports.2019;[Epub]     CrossRef
  • Polyphenols Inhibit Candida albicans and Streptococcus mutans Biofilm Formation
    Yosi Farkash, Mark Feldman, Isaac Ginsburg, Doron Steinberg, Miriam Shalish
    Dentistry Journal.2019; 7(2): 42.     CrossRef
  • Polymorphism analysis of virulence-related genes among Candida tropicalis isolates
    Li-Juan Zhang, Shuan-Bao Yu, Wen-Ge Li, Wen-Zhu Zhang, Yuan Wu, Jin-Xing Lu
    Chinese Medical Journal.2019; 132(4): 446.     CrossRef
  • Evaluation of synergistic anticandidal and apoptotic effects of ferulic acid and caspofungin against Candida albicans
    Zerrin Canturk
    Journal of Food and Drug Analysis.2018; 26(1): 439.     CrossRef
  • Multi-Locus Next-Generation Sequence Typing of DNA Extracted From Pooled Colonies Detects Multiple Unrelated Candida albicans Strains in a Significant Proportion of Patient Samples
    Ningxin Zhang, David Wheeler, Mauro Truglio, Cristina Lazzarini, Jenine Upritchard, Wendy McKinney, Karen Rogers, Anna Prigitano, Anna M. Tortorano, Richard D. Cannon, Roland S. Broadbent, Sally Roberts, Jan Schmid
    Frontiers in Microbiology.2018;[Epub]     CrossRef
  • Overview of selected virulence attributes in Aspergillus fumigatus, Candida albicans, Cryptococcus neoformans, Trichophyton rubrum, and Exophiala dermatitidis
    Hazal Boral, Banu Metin, Aylin Döğen, Seyedmojtaba Seyedmousavi, Macit Ilkit
    Fungal Genetics and Biology.2018; 111: 92.     CrossRef
  • Community Development betweenPorphyromonas gingivalisandCandida albicansMediated by InlJ and Als3
    Maryta N. Sztukowska, Lindsay C. Dutton, Christopher Delaney, Mark Ramsdale, Gordon Ramage, Howard F. Jenkinson, Angela H. Nobbs, Richard J. Lamont, Indranil Biswas
    mBio.2018;[Epub]     CrossRef
  • Clioquinol is a promising preventive morphological switching compound in the treatment of Candida infections linked to the use of intrauterine devices
    Bruna Pippi, Gabriella da Rosa Monte Machado, Vanessa Zafaneli Bergamo, Ricardo José Alves, Saulo Fernandes Andrade, Alexandre Meneghello Fuentefria
    Journal of Medical Microbiology.2018; 67(11): 1655.     CrossRef
  • Oral Administration of Human Polyvalent IgG by Mouthwash as an Adjunctive Treatment of Chronic Oral Candidiasis
    Sigifredo Pedraza-Sánchez, Julia I. Méndez-León, Yolanda Gonzalez, María Laura Ventura-Ayala, María Teresa Herrera, Jose Luis Lezana-Fernández, Joseph A. Bellanti, Martha Torres
    Frontiers in Immunology.2018;[Epub]     CrossRef
  • Single human B cell-derived monoclonal anti-Candida antibodies enhance phagocytosis and protect against disseminated candidiasis
    Fiona M. Rudkin, Ingrida Raziunaite, Hillary Workman, Sosthene Essono, Rodrigo Belmonte, Donna M. MacCallum, Elizabeth M. Johnson, Lisete M. Silva, Angelina S. Palma, Ten Feizi, Allan Jensen, Lars P. Erwig, Neil A. R. Gow
    Nature Communications.2018;[Epub]     CrossRef
  • Green Tea Polyphenols and Padma Hepaten Inhibit Candida albicans Biofilm Formation
    Yosi Farkash, Mark Feldman, Isaac Ginsburg, Doron Steinberg, Miriam Shalish, Giovanna Simonetti
    Evidence-Based Complementary and Alternative Medicine.2018;[Epub]     CrossRef
  • Maize Transposable Elements Ac/Ds as Insertion Mutagenesis Tools in Candida albicans
    Kevin Mielich, Ella Shtifman-Segal, Julia C Golz, Guisheng Zeng, Yue Wang, Judith Berman, Reinhard Kunze
    G3 Genes|Genomes|Genetics.2018; 8(4): 1139.     CrossRef
  • In vitroactivities of antifungals alone and in combination with tigecycline againstCandida albicansbiofilms
    Mayram Hacioglu, Ayse Seher Birteksoz Tan, Sibel Dosler, Nese Inan, Gulten Otuk
    PeerJ.2018; 6: e5263.     CrossRef
  • The putative transient receptor potential channel protein encoded by the orf19.4805 gene is involved in cation sensitivity, antifungal tolerance, and filamentation in Candida albicans
    Linghuo Jiang, Yi Yang
    Canadian Journal of Microbiology.2018; 64(10): 727.     CrossRef
  • Candida Infections and Therapeutic Strategies: Mechanisms of Action for Traditional and Alternative Agents
    Giselle C. de Oliveira Santos, Cleydlenne C. Vasconcelos, Alberto J. O. Lopes, Maria do S. de Sousa Cartágenes, Allan K. D. B. Filho, Flávia R. F. do Nascimento, Ricardo M. Ramos, Emygdia R. R. B. Pires, Marcelo S. de Andrade, Flaviane M. G. Rocha, Cristi
    Frontiers in Microbiology.2018;[Epub]     CrossRef
  • The Mycotoxin Zearalenone Hinders Candida albicans Biofilm Formation and Hyphal Morphogenesis
    Satish Kumar Rajasekharan, Jin-Hyung Lee, Yueju Zhao, Jintae Lee
    Indian Journal of Microbiology.2018; 58(1): 19.     CrossRef
  • In Vitro Characterization of a Biaryl Amide Anti-virulence Compound Targeting Candida albicans Filamentation and Biofilm Formation
    Jesus A. Romo, Christopher G. Pierce, Marisol Esqueda, Chiung-Yu Hung, Stephen. P. Saville, Jose L. Lopez-Ribot
    Frontiers in Cellular and Infection Microbiology.2018;[Epub]     CrossRef
  • Traditional Medicinal Plants of Higher Altitude of Himachal Pradesh as Functional Food Ingredient Cum Food Preservative and Bioavailability Enhancer of Anifungal Antibiotics
    Rajan Rolta, Akash Sharma, Vikas Kumar, Pankaj Kumar Chauhan, Anuradha Sourirajan, Kamal Dev
    SSRN Electronic Journal .2018;[Epub]     CrossRef
  • Antibiotic-induced alterations in taurocholic acid levels promote gastrointestinal colonization of Candida albicans
    Jack Guinan, Shankar Thangamani
    FEMS Microbiology Letters.2018;[Epub]     CrossRef
  • Oxyresveratrol-induced DNA cleavage triggers apoptotic response in Candida albicans
    Suhyun Kim, Dong Gun Lee
    Microbiology.2018; 164(9): 1112.     CrossRef
  • Anticandidal synergistic activity of Ocimum sanctum and fluconazole of azole resistance strains of clinical isolates
    K.U. Zaidi, F. Shah, R. Parmar, V. Thawani
    Journal de Mycologie Médicale.2018; 28(2): 289.     CrossRef
  • The human muscarinic acetylcholine receptor antagonist, Dicyclomine targets signal transduction genes and inhibits the virulence factors in the human pathogen, Candida albicans
    Awad Ali, Ashwini Jadhav, Priyanka Jangid, Rajendra Patil, Amruta Shelar, Sankunny Mohan Karuppayil
    The Journal of Antibiotics.2018; 71(4): 456.     CrossRef
  • Candida albicans - Biology, molecular characterization, pathogenicity, and advances in diagnosis and control – An update
    Maryam Dadar, Ruchi Tiwari, Kumaragurubaran Karthik, Sandip Chakraborty, Youcef Shahali, Kuldeep Dhama
    Microbial Pathogenesis.2018; 117: 128.     CrossRef
  • Molecular typing and genetic relatedness of 72 clinical Candida albicans isolates from poultry
    Jianchai Liu, Huanzhang Liu, Jinkun Yan, Na Liu, Heping Zhang, Chengrui Zhao, Yanwei Liu
    Veterinary Microbiology.2018; 214: 36.     CrossRef
  • In Vitro Culturing and Screening of Candida albicans Biofilms
    Megha Gulati, Matthew B. Lohse, Craig L. Ennis, Ruth E. Gonzalez, Austin M. Perry, Priyanka Bapat, Ashley Valle Arevalo, Diana L. Rodriguez, Clarissa J. Nobile
    Current Protocols in Microbiology.2018;[Epub]     CrossRef
  • Manufacturing and Optimization the Nanofibres Tissue of Poly(N-vinyl-2-pyrrolidone) - Poly(e-caprolactone) Shell/Poly(N-vinyl-2-pyrrolidone)-Amphotericin B Core for Controlled Drug Release System
    Fataneh Rouhollahi Vernosfaderani, Dariush Semnani
    Fibers and Polymers.2018; 19(3): 620.     CrossRef
  • The putative transcription factor CaMaf1 controls the sensitivity to lithium and rapamycin and represses RNA polymerase III transcription in Candida albicans
    Faiza Asghar, Hongbo Yan, Linghuo Jiang
    FEMS Yeast Research.2018;[Epub]     CrossRef
  • Antimicrobial Photodynamic Therapy Mediated by Curcumin-Loaded Polymeric Nanoparticles in a Murine Model of Oral Candidiasis
    Vinicius Tatsuyuji Sakima, Paula Aboud Barbugli, Paulo Sérgio Cerri, Marlus Chorilli, Juliana Cabrini Carmello, Ana Cláudia Pavarina, Ewerton Garcia de Oliveira Mima
    Molecules.2018; 23(8): 2075.     CrossRef
  • Antibacterial quaternary ammonium compounds in dental materials: A systematic review
    Pooyan Makvandi, Rezvan Jamaledin, Mostafa Jabbari, Nasser Nikfarjam, Assunta Borzacchiello
    Dental Materials.2018; 34(6): 851.     CrossRef
  • Ions released from a S-PRG filler induces oxidative stress in Candida albicans inhibiting its growth and pathogenicity
    Muneaki Tamura, Marni E. Cueno, Kazumasa Abe, Noriaki Kamio, Kuniyasu Ochiai, Kenichi Imai
    Cell Stress and Chaperones.2018; 23(6): 1337.     CrossRef
  • A Systematic Review: The Role of Resident Memory T Cells in Infectious Diseases and Their Relevance for Vaccine Development
    Visai Muruganandah, Harindra D. Sathkumara, Severine Navarro, Andreas Kupz
    Frontiers in Immunology.2018;[Epub]     CrossRef
  • Incorporation of triclosan and acridine orange into liposomes for evaluating the susceptibility of Candida albicans
    Karla B. Romio, Kevin F. dos Santos, Romário J. da Silva, Maria F.C. Pedro, Alessandro S. Kalck, Marcos da Silva Sousa, Leandro M. Possamai, Paula C.S. Souto, Josmary R. Silva, Nara C. de Souza
    Journal of Photochemistry and Photobiology B: Biology.2017; 173: 514.     CrossRef
  • Cell Surface Hydrophobicity as a Virulence Factor in Candida albicans
    Renuka R. Goswami, Suhas D. Pohare, Jayant S. Raut, S. Mohan Karuppayil
    Biosciences, Biotechnology Research Asia.2017; 14(4): 1503.     CrossRef
  • Nicotine Enhances Interspecies Relationship betweenStreptococcus mutansandCandida albicans
    Shiyu Liu, Wei Qiu, Keke Zhang, Xuedong Zhou, Biao Ren, Jinzhi He, Xin Xu, Lei Cheng, Mingyun Li
    BioMed Research International.2017; 2017: 1.     CrossRef
  • Clotrimazole and econazole inhibit Streptococcus mutans biofilm and virulence in vitro
    Wei Qiu, Biao Ren, Huanqin Dai, Lixin Zhang, Qiong Zhang, Xuedong Zhou, Yuqing Li
    Archives of Oral Biology.2017; 73: 113.     CrossRef
  • A functional link between hyphal maintenance and quorum sensing in Candida albicans
    Melanie Polke, Marcel Sprenger, Kirstin Scherlach, María Cristina Albán‐Proaño, Ronny Martin, Christian Hertweck, Bernhard Hube, Ilse D. Jacobsen
    Molecular Microbiology.2017; 103(4): 595.     CrossRef
  • Characterization of carboxylate nanoparticle adhesion with the fungal pathogen Candida albicans
    Amy Lyden, Lisa Lombardi, Wilfried Sire, Peng Li, Jeremy C. Simpson, Geraldine Butler, Gil U. Lee
    Nanoscale.2017; 9(41): 15911.     CrossRef
  • Histone Acetyltransferase Encoded by NGG1 is Required for Morphological Conversion and Virulence of Candida Albicans
    De-Dong Li, Beth Burgwyn Fuchs, Yan Wang, Xiao-Wen Huang, Dan-Dan Hu, Yan Sun, Dong Chai, Yuan-Ying Jiang, Eleftherios Mylonakis
    Future Microbiology.2017; 12(16): 1497.     CrossRef
  • Bacteriocin-Antimicrobial Synergy: A Medical and Food Perspective
    Harsh Mathur, Des Field, Mary C. Rea, Paul D. Cotter, Colin Hill, R. Paul Ross
    Frontiers in Microbiology.2017;[Epub]     CrossRef
  • Genetic analysis of the Candida albicans biofilm transcription factor network using simple and complex haploinsufficiency
    Virginia E. Glazier, Thomas Murante, Daniel Murante, Kristy Koselny, Yuan Liu, Dongyeop Kim, Hyun Koo, Damian J. Krysan, Geraldine Butler
    PLOS Genetics.2017; 13(8): e1006948.     CrossRef
  • Quorum sensing by farnesol revisited
    Melanie Polke, Ilse D. Jacobsen
    Current Genetics.2017; 63(5): 791.     CrossRef
  • Disarming Fungal Pathogens: Bacillus safensis Inhibits Virulence Factor Production and Biofilm Formation by Cryptococcus neoformans and Candida albicans
    François L. Mayer, James W. Kronstad, Yong-Sun Bahn, J. Andrew Alspaugh, Deborah Hogan
    mBio.2017;[Epub]     CrossRef
  • High-speed stimulated hyperspectral Raman imaging using rapid acousto-optic delay lines
    Mohammed S. Alshaykh, Chien-Sheng Liao, Oscar E. Sandoval, Gregory Gitzinger, Nicolas Forget, Daniel E. Leaird, Ji-Xin Cheng, Andrew M. Weiner
    Optics Letters.2017; 42(8): 1548.     CrossRef
  • Hydrophilic nano-silica coating agents with platinum and diamond nanoparticles for denture base materials
    Taro YOSHIZAKI, Norihisa AKIBA, Masanao INOKOSHI, Masayuki SHIMADA, Shunsuke MINAKUCHI
    Dental Materials Journal.2017; 36(3): 333.     CrossRef
  • Interactions of a prenylated flavonoid from Dalea elegans with fluconazole against azole- resistant Candida albicans
    Sebastián Barceló, Mariana Peralta, Maximiliano Calise, Soledad Finck, Gabriela Ortega, Roberto A. Diez, José Luis Cabrera, Cristina Pérez
    Phytomedicine.2017; 32: 24.     CrossRef
  • Spontaneous fungal peritonitis: a rare but severe complication of liver cirrhosis
    Marta Gravito-Soares, Elisa Gravito-Soares, Sandra Lopes, Graça Ribeiro, Pedro Figueiredo
    European Journal of Gastroenterology & Hepatology.2017; 29(9): 1010.     CrossRef
  • Probiotic normalization of Candida albicans in schizophrenia: A randomized, placebo-controlled, longitudinal pilot study
    Emily G. Severance, Kristin L. Gressitt, Cassie R. Stallings, Emily Katsafanas, Lucy A. Schweinfurth, Christina L.G. Savage, Maria B. Adamos, Kevin M. Sweeney, Andrea E. Origoni, Sunil Khushalani, Faith B. Dickerson, Robert H. Yolken
    Brain, Behavior, and Immunity.2017; 62: 41.     CrossRef
  • Anti-biofilm activity of a sophorolipid-amphotericin B niosomal formulation against Candida albicans
    Farazul Haque, Mohammad Sajid, Swaranjit Singh Cameotra, Mani Shankar Battacharyya
    Biofouling.2017; 33(9): 768.     CrossRef
  • The Candida albicans transcription factor Cas5 couples stress responses, drug resistance and cell cycle regulation
    Jinglin L. Xie, Longguang Qin, Zhengqiang Miao, Ben T. Grys, Jacinto De La Cruz Diaz, Kenneth Ting, Jonathan R. Krieger, Jiefei Tong, Kaeling Tan, Michelle D. Leach, Troy Ketela, Michael F. Moran, Damian J. Krysan, Charles Boone, Brenda J. Andrews, Anna S
    Nature Communications.2017;[Epub]     CrossRef
  • Autophagy and its implication in human oral diseases
    Ya-Qin Tan, Jing Zhang, Gang Zhou
    Autophagy.2017; 13(2): 225.     CrossRef
  • Plumbagin, a Plant-Derived Compound, Exhibits Antifungal Combinatory Effect with Amphotericin B againstCandida albicansClinical Isolates and Anti-hepatitis C Virus Activity
    Sherif T. S. Hassan, Kateřina Berchová-Bímová, Jan Petráš
    Phytotherapy Research.2016; 30(9): 1487.     CrossRef
  • DNA barcoding revealed Nematodospora valgi gen. nov., sp. nov. and Candida cetoniae sp. nov. in the Lodderomyces clade
    Dilnora E. Gouliamova, Roumen A. Dimitrov, Maudy Th. Smith, Marizeth Groenewald, Margarita M. Stoilova-Disheva, Borislav V. Guéorguiev, Teun Boekhout
    Fungal Biology.2016; 120(2): 179.     CrossRef
  • An approach toward optimization of the influential growth determinants of opportunistic yeast isolatePichia guilliermondii
    Suprabhat Mukherjee, Niladri Mukherjee, Priya Roy, Prasanta Saini, Santi P. Sinha Babu
    Preparative Biochemistry and Biotechnology.2016; 46(5): 440.     CrossRef
  • Amplification of TLO Mediator Subunit Genes Facilitate Filamentous Growth in Candida Spp.
    Zhongle Liu, Gary P. Moran, Derek J. Sullivan, Donna M. MacCallum, Lawrence C. Myers, Geraldine Butler
    PLOS Genetics.2016; 12(10): e1006373.     CrossRef
  • Peroxy Pyruvic Acid-Containing Topical Anti-Infective: A Potential Candidate for a Wound Instillation Solution
    Edwin D. Neas, Julie A. Dunn, Evelyn Dimaano Silva, A. Morgan Chambers, Gary J. Luckasen, Adam Jaskowiak
    Advances in Wound Care.2016; 5(10): 432.     CrossRef
  • The Eighth Central European Conference “Chemistry towards Biology”: Snapshot
    András Perczel, Atanas Atanasov, Vladimír Sklenář, Jiří Nováček, Veronika Papoušková, Pavel Kadeřávek, Lukáš Žídek, Henryk Kozłowski, Joanna Wątły, Aleksandra Hecel, Paulina Kołkowska, Jaroslav Koča, Radka Svobodová-Vařeková, Lukáš Pravda, David Sehnal, V
    Molecules.2016; 21(10): 1381.     CrossRef
  • Systematic Analysis of the Lysine Acetylome in Candida albicans
    Xiaowei Zhou, Guanyu Qian, Xingling Yi, Xiaofang Li, Weida Liu
    Journal of Proteome Research.2016; 15(8): 2525.     CrossRef
  • Effects of Yeast and Bacterial Commensals and Pathogens of the Female Genital Tract on the Transepithelial Electrical Resistance of HeLa Cells
    Vassiliki Tsata, Aristea Velegraki, Anastasios Ioannidis, Cornelia Poulopoulou, Pantelis Bagos, Maria Magana, Stylianos Chatzipanagiotou
    The Open Microbiology Journal.2016; 10(1): 90.     CrossRef
  • 6-O-Branched Oligo-β-glucan-Based Antifungal Glycoconjugate Vaccines
    Guochao Liao, Zhifang Zhou, Jun Liao, Luning Zu, Qiuye Wu, Zhongwu Guo
    ACS Infectious Diseases.2016; 2(2): 123.     CrossRef
  • CaTip41 regulates protein phosphatase 2A activity, CaRad53 deactivation and the recovery of DNA damage-induced filamentation to yeast form inCandida albicans
    Jinrong Feng, Yinong Duan, Wei Sun, Yongwei Qin, Zhong Zhuang, Dandan Zhu, Xiaolei Sun, Linghuo Jiang, Richard Calderone
    FEMS Yeast Research.2016; 16(2): fow009.     CrossRef
  • Polymicrobial biofilm formation byCandida albicans, Actinomyces naeslundii, andStreptococcus mutansisCandida albicansstrain and medium dependent
    Mohd Hafiz Arzmi, Ali D. Alnuaimi, Stuart Dashper, Nicola Cirillo, Eric C. Reynolds, Michael McCullough
    Medical Mycology.2016; 54(8): 856.     CrossRef
  • Sds22 participates in Glc7 mediated Rad53 dephosphorylation in MMS-induced DNA damage in Candida albicans
    Guangyin Yao, Junhua Wan, Chunhua Mu, Qizheng Liu, Yue Wang, Jianli Sang
    Fungal Genetics and Biology.2016; 93: 50.     CrossRef
  • Candida albicans exposures, sex specificity and cognitive deficits in schizophrenia and bipolar disorder
    Emily G Severance, Kristin L Gressitt, Catherine R Stallings, Emily Katsafanas, Lucy A Schweinfurth, Christina L Savage, Maria B Adamos, Kevin M Sweeney, Andrea E Origoni, Sunil Khushalani, F Markus Leweke, Faith B Dickerson, Robert H Yolken
    npj Schizophrenia.2016;[Epub]     CrossRef
  • Comparison of antimicrobial activities of polyacrylonitrile fibers modified with quaternary phosphonium salts having different alkyl chain lengths
    Li Chang, Jing Wang, Chunyi Tong, Liang Zhao, Xuanming Liu
    Journal of Applied Polymer Science.2016;[Epub]     CrossRef
  • Spatial and compositional variation in the fungal communities of organic and conventionally grown apple fruit at the consumer point-of-purchase
    Ahmed Abdelfattah, Michael Wisniewski, Samir Droby, Leonardo Schena
    Horticulture Research.2016;[Epub]     CrossRef
  • High-Performance Liquid Chromatography-Diodic Array Detector, Fungistatic, and Anti-Morphogenical Analysis of Extracts from Psidium brownianum Mart. ex DC. Against Yeasts of the Genus Candida
    Maria Flaviana B. Morais-Braga, Joara N. P. Carneiro, Antonio J. T. Machado, Débora L. Sales, Dara I.V. Brito, Rosimeire S. Albuquerque, Aline A. Boligon, Margareth L. Athayde, João T. Calixto Júnior, Djair S. L. Souza, Edeltrudes O. Lima, Irwin R. A. Men
    International Journal of Food Properties.2016; 19(8): 1837.     CrossRef
  • Rapid Detection of Candida albicans by Polymerase Spiral Reaction Assay in Clinical Blood Samples
    Xiaoqun Jiang, Derong Dong, Lihong Bian, Dayang Zou, Xiaoming He, Da Ao, Zhan Yang, Simo Huang, Ningwei Liu, Wei Liu, Liuyu Huang
    Frontiers in Microbiology.2016;[Epub]     CrossRef
  • Antimicrobial Activity and Phytochemical Analysis of Organic Extracts from Cleome spinosa Jaqc.
    Ana P. Sant'Anna da Silva, Luís C. Nascimento da Silva, Caíque S. Martins da Fonseca, Janete M. de Araújo, Maria T. dos Santos Correia, Marilene da Silva Cavalcanti, Vera L. de Menezes Lima
    Frontiers in Microbiology.2016;[Epub]     CrossRef
  • Molecular mechanisms associated with Fluconazole resistance in clinical Candida albicans isolates from India
    Arati Mane, Pallavi Vidhate, Chanchal Kusro, Vaishali Waman, Vandana Saxena, Urmila Kulkarni‐Kale, Arun Risbud
    Mycoses.2016; 59(2): 93.     CrossRef
  • Immobilization of chlorophyll by using layer-by-layer technique for controlled release systems and photodynamic inactivation
    Filipe D.S. Gorza, Romário J. da Silva, Tarquin F. Trescher, Graciela C. Pedro, Maria A. Oliveira de Sousa, Paula C.S. Souto, Josmary R. Silva, Nara C. de Souza
    Photodiagnosis and Photodynamic Therapy.2016; 15: 147.     CrossRef
  • Syngonanthus nitens Bong. (Rhul.)-Loaded Nanostructured System for Vulvovaginal Candidiasis Treatment
    Matheus Dos Santos Ramos, Luciani De Toledo, Giovana Calixto, Bruna Bonifácio, Marcelo De Freitas Araújo, Lourdes Dos Santos, Margarete De Almeida, Marlus Chorilli, Taís Bauab
    International Journal of Molecular Sciences.2016; 17(8): 1368.     CrossRef
  • British Journal of Biomedical Science in 2015: what have we learned?
    Andrew Blann, Brian Nation
    British Journal of Biomedical Science.2016; 73(1): 4.     CrossRef
  • The effects of photodynamic treatment with new methylene blue N on the Candida albicans proteome
    Guilherme Thomaz Pereira Brancini, Gabriela Braga Rodrigues, Mariana de Souza Lima Rambaldi, Clarice Izumi, Ana Patrícia Yatsuda, Mark Wainwright, José César Rosa, Gilberto Úbida Leite Braga
    Photochemical & Photobiological Sciences.2016; 15(12): 1503.     CrossRef
  • Endogenous nitric oxide accumulation is involved in the antifungal activity of Shikonin against Candida albicans
    Zebin Liao, Yu Yan, Huaihuai Dong, Zhenyu Zhu, Yuanying Jiang, Yingying Cao
    Emerging Microbes & Infections.2016; 5(1): 1.     CrossRef
  • Identification of Candida Species Using MP65 Gene and Evaluation of the Candida albicans MP65 Gene Expression in BALB/C Mice
    Farahnaz Bineshian, Mohammad Hossien Yadegari, Zohre Sharifi, Mohammadreza Akbari Eidgahi, Reza Nasr
    Jundishapur Journal of Microbiology.2015;[Epub]     CrossRef
  • Mechanisms of azole resistance in Candida albicans clinical isolates from Shanghai, China
    Jin-Yan Liu, Ce Shi, Ying Wang, Wen-Jing Li, Yue Zhao, Ming-Jie Xiang
    Research in Microbiology.2015; 166(3): 153.     CrossRef
  • The evolution of drug resistance in clinical isolates of Candida albicans
    Christopher B Ford, Jason M Funt, Darren Abbey, Luca Issi, Candace Guiducci, Diego A Martinez, Toni Delorey, Bi yu Li, Theodore C White, Christina Cuomo, Reeta P Rao, Judith Berman, Dawn A Thompson, Aviv Regev
    eLife.2015;[Epub]     CrossRef
  • Plants used in folk medicine: The potential of their hydromethanolic extracts against Candida species
    Natália Martins, Isabel C.F.R. Ferreira, Lillian Barros, Ana Maria Carvalho, Mariana Henriques, Sónia Silva
    Industrial Crops and Products.2015; 66: 62.     CrossRef
  • Activity of phenolic compounds from plant origin against Candida species
    Natália Martins, Lillian Barros, Mariana Henriques, Sónia Silva, Isabel C.F.R. Ferreira
    Industrial Crops and Products.2015; 74: 648.     CrossRef
  • Mechanism underlying renal failure caused by pathogenic Candida albicans infection
    SHIN JAE-CHEN, JEON YOUNG-JOO, PARK SEON-MIN, SEO KANG SEOK, SHIM JUNG-HYUN, CHAE JUNG-IL
    Biomedical Reports.2015; 3(2): 179.     CrossRef
  • Prevalence of oral Candida in the first year of life
    C. Stecksén‐Blicks, E. Granström, S. A. Silfverdal, C. E. West
    Mycoses.2015; 58(9): 550.     CrossRef
  • Ribosomal protein S6 phosphorylation is controlled by TOR and modulated by PKA in Candida albicans
    Tahmeena Chowdhury, Julia R. Köhler
    Molecular Microbiology.2015; 98(2): 384.     CrossRef
  • Mutations in the Flo8 transcription factor contribute to virulence and phenotypic traits in Candida albicans strains
    Jin-Yan Liu, Wen-Jing Li, Ce Shi, Ying Wang, Yue Zhao, Ming-Jie Xiang
    Microbiological Research.2015; 178: 1.     CrossRef
  • In VivoAnti-CandidaActivity of Phenolic Extracts and Compounds: Future Perspectives Focusing on Effective Clinical Interventions
    Natália Martins, Lillian Barros, Mariana Henriques, Sónia Silva, Isabel C. F. R. Ferreira
    BioMed Research International.2015; 2015: 1.     CrossRef
  • Candida albicans up-regulates the Fas-L expression in liver Natural Killer and Natural Killer T cells.
    María Sol Renna, Carlos Mauricio Figueredo, María Cecilia Rodríguez-Galán, Paula Alejandra Icely, Hugo Cejas, Roxana Cano, Silvia Graciela Correa, Claudia Elena Sotomayor
    Immunobiology.2015; 220(11): 1210.     CrossRef
  • CD47 Promotes Protective Innate and Adaptive Immunity in a Mouse Model of Disseminated Candidiasis
    Dhammika H. M. L. P. Navarathna, Erica V. Stein, Elizabeth C. Lessey-Morillon, Debasis Nayak, Gema Martin-Manso, David D. Roberts, Julian R Naglik
    PLOS ONE.2015; 10(5): e0128220.     CrossRef
  • Comparison of anti-Candida albicans activities of halogenomethylsulfonyl derivatives
    Małgorzata Bondaryk, Zbigniew Ochal, Monika Staniszewska
    Medicinal Chemistry Research.2015; 24(5): 1799.     CrossRef
  • Candida albicans Biofilms and Human Disease
    Clarissa J. Nobile, Alexander D. Johnson
    Annual Review of Microbiology.2015; 69(1): 71.     CrossRef
  • Striking up the conversation: quorum sensing in fungi
    Brooke Martini, Cody Orr, Ginny Webb
    Fine Focus.2015; 1(2): 139.     CrossRef
  • Composition, taxonomy and functional diversity of the oropharynx microbiome in individuals with schizophrenia and controls
    Eduardo Castro-Nallar, Matthew L. Bendall, Marcos Pérez-Losada, Sarven Sabuncyan, Emily G. Severance, Faith B. Dickerson, Jennifer R. Schroeder, Robert H. Yolken, Keith A. Crandall
    PeerJ.2015; 3: e1140.     CrossRef
  • Simultaneous Detection of Four Common Oral Candida Species from Blood Samples by the Fluorescence Polarization Assay
    Yuhong He, Wei Geng, Peihuan Wang, Lanlan Xi, Zhaoling Wang, Gaoyi Wu, Chunling Wang
    Cell Biochemistry and Biophysics.2015; 71(2): 919.     CrossRef
  • Synthesis and Immunological Studies of Linear Oligosaccharides of β-Glucan As Antigens for Antifungal Vaccine Development
    Guochao Liao, Zhifang Zhou, Srinivas Burgula, Jun Liao, Cheng Yuan, Qiuye Wu, Zhongwu Guo
    Bioconjugate Chemistry.2015; 26(3): 466.     CrossRef
  • In Vitro Studies of Chromone-Tetrazoles against Pathogenic Protozoa, Bacteria, and Fungi
    Pedro Cano, Alejandro Islas-Jácome, Ángeles Rangel-Serrano, Fernando Anaya-Velázquez, Felipe Padilla-Vaca, Elías Trujillo-Esquivel, Patricia Ponce-Noyola, Antonio Martínez-Richa, Rocío Gámez-Montaño
    Molecules.2015; 20(7): 12436.     CrossRef
  • Genetic and phenotypic characterization of Candida albicans strains isolated from infectious disease patients in Shanghai
    Lvyin Hu, Xin Du, Tianming Li, Yan Song, Shubei Zai, Xiangnan Hu, Xiaonan Zhang, Min Li
    Journal of Medical Microbiology.2015; 64(1): 74.     CrossRef
  • Compositional and immunobiological analyses of extracellular vesicles released byCandida albicans
    Gabriele Vargas, Juliana D. B. Rocha, Debora Leite Oliveira, Priscila Costa Albuquerque, Susana Frases, Suelen S. Santos, Joshua Daniel Nosanchuk, Andre Marco Oliveira Gomes, Lia C. A. S. Medeiros, Kildare Miranda, Tiago J. P. Sobreira, Ernesto S. Nakayas
    Cellular Microbiology.2015; 17(3): 389.     CrossRef
  • In vitro photodynamic inactivation of Candida albicans by phenothiazine dye (new methylene blue) and Indocyanine green (EmunDo®)
    Reza Fekrazad, Vadood Ghasemi Barghi, Arash Poorsattar Bejeh Mir, Masoumeh Shams-Ghahfarokhi
    Photodiagnosis and Photodynamic Therapy.2015; 12(1): 52.     CrossRef
  • A novel in vitro assay for assessing efficacy and toxicity of antifungals using human leukaemic cells infected with Candida albicans
    J. Boros-Majewska, Ł. Turczyk, X. Wei, S. Milewski, D.W. Williams
    Journal of Applied Microbiology.2015; 119(1): 177.     CrossRef
  • Clonal reproduction in fungi
    John W. Taylor, Christopher Hann-Soden, Sara Branco, Iman Sylvain, Christopher E. Ellison
    Proceedings of the National Academy of Sciences.2015; 112(29): 8901.     CrossRef
  • Glutathione Metabolism in Candida albicans Resistant Strains to Fluconazole and Micafungin
    Bruno Maras, Letizia Angiolella, Giuseppina Mignogna, Elisabetta Vavala, Alberto Macone, Marisa Colone, Giuseppina Pitari, Annarita Stringaro, Silvestro Dupré, Anna Teresa Palamara, Alix Therese Coste
    PLoS ONE.2014; 9(6): e98387.     CrossRef
  • Analysis of Candida albicans Mutants Defective in the Cdk8 Module of Mediator Reveal Links between Metabolism and Biofilm Formation
    Allia K. Lindsay, Diana K. Morales, Zhongle Liu, Nora Grahl, Anda Zhang, Sven D. Willger, Lawrence C. Myers, Deborah A. Hogan, Geraldine Butler
    PLoS Genetics.2014; 10(10): e1004567.     CrossRef
  • Towards non‐invasive monitoring of pathogen–host interactions during C andida albicans biofilm formation using in vivo bioluminescence
    Greetje Vande Velde, Soňa Kucharíková, Sanne Schrevens, Uwe Himmelreich, Patrick Van Dijck
    Cellular Microbiology.2014; 16(1): 115.     CrossRef
  • Candida albicans Utilizes a Modified β-Oxidation Pathway for the Degradation of Toxic Propionyl-CoA
    Christian Otzen, Bettina Bardl, Ilse D. Jacobsen, Markus Nett, Matthias Brock
    Journal of Biological Chemistry.2014; 289(12): 8151.     CrossRef
  • Inorganic phosphate uptake in unicellular eukaryotes
    Claudia F. Dick, André L.A. Dos-Santos, José R. Meyer-Fernandes
    Biochimica et Biophysica Acta (BBA) - General Subjects.2014; 1840(7): 2123.     CrossRef
  • Candida and Other Fungal Species
    B.P. Krom, S. Kidwai, J.M. ten Cate
    Journal of Dental Research.2014; 93(5): 445.     CrossRef
  • Cross-feeding and interkingdom communication in dual-species biofilms of Streptococcus mutans and Candida albicans
    Helena Sztajer, Szymon P Szafranski, Jürgen Tomasch, Michael Reck, Manfred Nimtz, Manfred Rohde, Irene Wagner-Döbler
    The ISME Journal.2014; 8(11): 2256.     CrossRef
  • Hibiscus sabdariffa extract inhibits in vitro biofilm formation capacity of Candida albicans isolated from recurrent urinary tract infections
    Issam Alshami, Ahmed E Alharbi
    Asian Pacific Journal of Tropical Biomedicine.2014; 4(2): 104.     CrossRef
  • Candida glabrata: a review of its features and resistance
    C. F. Rodrigues, S. Silva, M. Henriques
    European Journal of Clinical Microbiology & Infectious Diseases.2014; 33(5): 673.     CrossRef
  • An Investigation into the Stability and Sterility of Citric Acid Solutions Used for Cough Reflex Testing
    James R. Falconer, Zimei Wu, Hugo Lau, Joanna Suen, Lucy Wang, Sarah Pottinger, Elaine Lee, Nawar Alazawi, Molly Kallesen, Derryn A. Gargiulo, Simon Swift, Darren Svirskis
    Dysphagia.2014; 29(5): 622.     CrossRef
  • Melanocytes and melanin represent a first line of innate immunity against Candida albicans
    C. V. Tapia, M. Falconer, F. Tempio, F. Falcon, M. Lopez, M. Fuentes, C. Alburquenque, J. Amaro, S. A. Bucarey, A. D. Nardo
    Medical Mycology.2014; 52(5): 445.     CrossRef
  • Antifungal effect of electrospun nanofibers containing cetylpyridinium chloride against Candida albicans
    Valdirene Alves dos SANTOS, Patricia Verônica Aulestia VIERA, Adriano Marim de OLIVEIRA, Maria Helena Ambrosio ZANIN, Maria Aparecida BORSATTI
    Brazilian Oral Research.2014; 28(1): 1.     CrossRef
  • TheCandidaGenome Database: The new homology information page highlights protein similarity and phylogeny
    Jonathan Binkley, Martha B. Arnaud, Diane O. Inglis, Marek S. Skrzypek, Prachi Shah, Farrell Wymore, Gail Binkley, Stuart R. Miyasato, Matt Simison, Gavin Sherlock
    Nucleic Acids Research.2014; 42(D1): D711.     CrossRef
  • A Novel Antifungal Is Active against Candida albicans Biofilms and Inhibits Mutagenic Acetaldehyde Production In Vitro
    Mikko T. Nieminen, Lily Novak-Frazer, Vilma Rautemaa, Ranjith Rajendran, Timo Sorsa, Gordon Ramage, Paul Bowyer, Riina Rautemaa, Martine Bassilana
    PLoS ONE.2014; 9(5): e97864.     CrossRef
  • Candidiasis: Predisposing Factors, Prevention, Diagnosis and Alternative Treatment
    Natália Martins, Isabel C. F. R. Ferreira, Lillian Barros, Sónia Silva, Mariana Henriques
    Mycopathologia.2014; 177(5-6): 223.     CrossRef
  • Serum interleukin-6 levels in murine models of Candida albicans infection
    Renátó Kovács, Anita Czudar, László Horváth, Levente Szakács, László Majoros, József Kónya
    Acta Microbiologica et Immunologica Hungarica.2014; 61(1): 61.     CrossRef
  • Microbial cell surface proteins and secreted metabolites involved in multispecies biofilms
    Liesbeth Demuyser, Mary Ann Jabra-Rizk, Patrick Van Dijck
    Pathogens and Disease.2014; 70(3): 219.     CrossRef
  • Phenotypic Analysis of a Family of Transcriptional Regulators, the Zinc Cluster Proteins, in the Human Fungal Pathogen Candida glabrata
    Natalia Klimova, Ralph Yeung, Nadezda Kachurina, Bernard Turcotte
    G3 Genes|Genomes|Genetics.2014; 4(5): 931.     CrossRef
  • Novel Nystatin A1 derivatives exhibiting low host cell toxicity and antifungal activity in an in vitro model of oral candidosis
    Joanna Boros-Majewska, Natalia Salewska, Edward Borowski, Sławomir Milewski, Sladjana Malic, Xiao-Qing Wei, Anthony J. Hayes, Melanie J. Wilson, David W. Williams
    Medical Microbiology and Immunology.2014; 203(5): 341.     CrossRef
  • A novel surfactant aided micellar system of oxidation inhibitors in clotrimazole bioadhesive gel: development, characterization, in vitro and in vivo antifungal evaluation against Candida clinical isolates
    Varun Bhardwaj, Jitender Monga, Amit Sharma, Shailesh Sharma, Arun Sharma, Poonam Sharma
    RSC Adv..2014; 4(88): 47207.     CrossRef
  • Effect of a Silver Nanoparticles Solution on Staphylococcus aureus and Candida spp.
    Amanda Fucci Wady, Ana Lucia Machado, Camila Cristina Foggi, Camila Andrade Zamperini, Valtencir Zucolotto, Eduardo Buozi Moffa, Carlos Eduardo Vergani, Miguel A. Correa-Duarte
    Journal of Nanomaterials.2014;[Epub]     CrossRef
  • The Synthetic Melanocortin (CKPV)2 Exerts Anti-Fungal and Anti-Inflammatory Effects against Candida albicans Vaginitis via Inducing Macrophage M2 Polarization
    Hai-xia Ji, Yu-lian Zou, Jing-jing Duan, Zhi-rong Jia, Xian-jing Li, Zhuo Wang, Li Li, Yong-wen Li, Gen-yan Liu, Ming-Qing Tong, Xiao-yi Li, Guo-hui Zhang, Xiang-rong Dai, Ling He, Zhi-yu Li, Cong Cao, Yong Yang, David M. Ojcius
    PLoS ONE.2013; 8(2): e56004.     CrossRef
  • β-Asarone, an active principle of Acorus calamus rhizome, inhibits morphogenesis, biofilm formation and ergosterol biosynthesis in Candida albicans
    Sandeep B. Rajput, S. Mohan Karuppayil
    Phytomedicine.2013; 20(2): 139.     CrossRef
  • In vitro photodynamic inactivation of Candida species and mouse fibroblasts with phenothiazinium photosensitisers and red light
    Gabriela B. Rodrigues, Marcelo Dias-Baruffi, Natalie Holman, Mark Wainwright, Gilberto U.L. Braga
    Photodiagnosis and Photodynamic Therapy.2013; 10(2): 141.     CrossRef
  • Recent insights into Candida albicans biofilm resistance mechanisms
    Lotte Mathé, Patrick Van Dijck
    Current Genetics.2013; 59(4): 251.     CrossRef
  • Synthesis and cytotoxicity of novel (thiazol-2-yl)hydrazine derivatives as promising anti-Candida agents
    Simone Carradori, Daniela Secci, Adriana Bolasco, Daniela Rivanera, Emanuela Mari, Alessandra Zicari, Lavinia Vittoria Lotti, Bruna Bizzarri
    European Journal of Medicinal Chemistry.2013; 65: 102.     CrossRef
  • Anti-Candida properties of asaronaldehyde of Acorus gramineus rhizome and three structural isomers
    Sandeep B Rajput, Ravikumar B Shinde, Madhushree M Routh, Sankunny M Karuppayil
    Chinese Medicine.2013;[Epub]     CrossRef
  • Candida albicans and Pseudomonas aeruginosa interactions: More than an opportunistic criminal association?
    J.-B. Méar, E. Kipnis, E. Faure, R. Dessein, G. Schurtz, K. Faure, B. Guery
    Médecine et Maladies Infectieuses.2013; 43(4): 146.     CrossRef
  • Antifungal activity of the lipopeptides produced by Bacillus amyloliquefaciens anti-CA against Candida albicans isolated from clinic
    Bo Song, Yan-Jun Rong, Ming-Xin Zhao, Zhen-Ming Chi
    Applied Microbiology and Biotechnology.2013; 97(16): 7141.     CrossRef
  • Isolation of (-)-olivil-9′-O-β-d-glucopyranoside from Sambucus williamsii and its antifungal effects with membrane-disruptive action
    Hyemin Choi, Juneyoung Lee, Young Su Chang, Eun-Rhan Woo, Dong Gun Lee
    Biochimica et Biophysica Acta (BBA) - Biomembranes.2013; 1828(8): 2002.     CrossRef
  • Control of Candida albicans Metabolism and Biofilm Formation by Pseudomonas aeruginosa Phenazines
    Diana K. Morales, Nora Grahl, Chinweike Okegbe, Lars E. P. Dietrich, Nicholas J. Jacobs, Deborah A. Hogan, Judith Berman
    mBio.2013;[Epub]     CrossRef
  • Anionic Antimicrobial and Anticancer Peptides from Plants
    Saurabh Prabhu, Sarah R. Dennison, Bob Lea, Timothy J. Snape, Iain D. Nicholl, Iza Radecka, Frederick Harris
    Critical Reviews in Plant Sciences.2013; 32(5): 303.     CrossRef
  • Massive Occult Infection of a Left Ventricular Assist Device With Candida albicans
    Anton Sabashnikov, Prashant N. Mohite, Bartolomiej Zych, Aron‐Frederick Popov, Diana Garcia, André R. Simon
    Artificial Organs.2013; 37(6): 582.     CrossRef
  • Pharmacokinetics and tissue distribution of amphotericin B following oral administration of three lipid-based formulations to rats
    Fady Ibrahim, Pavel Gershkovich, Olena Sivak, Ellen K. Wasan, Kishor M. Wasan
    Drug Development and Industrial Pharmacy.2013; 39(9): 1277.     CrossRef
  • Candida species: current epidemiology, pathogenicity, biofilm formation, natural antifungal products and new therapeutic options
    J. C. O. Sardi, L. Scorzoni, T. Bernardi, A. M. Fusco-Almeida, M. J. S. Mendes Giannini
    Journal of Medical Microbiology.2013; 62(1): 10.     CrossRef
  • Molecular Fingerprints to IdentifyCandidaSpecies
    Claudia Spampinato, Darío Leonardi
    BioMed Research International.2013; 2013: 1.     CrossRef
  • A novel killer toxin produced by the marine-derived yeast Wickerhamomyces anomalus YF07b
    Feng-Jun Guo, Yan Ma, Hong-Mei Xu, Xiang-Hong Wang, Zhen-Ming Chi
    Antonie van Leeuwenhoek.2013; 103(4): 737.     CrossRef
  • Vanillin Inhibits Growth, Morphogenesis and Biofilm Formation byCandida albicans
    Jayant S. Raut, Sandeep B. Rajput, Ravikumar B. Shinde, Babasaheb S. Surwase, S. Mohan Karuppayil
    Journal of Biologically Active Products from Nature.2013; 3(2): 130.     CrossRef
  • The secretory pathway: exploring yeast diversity
    Marizela Delic, Minoska Valli, Alexandra B. Graf, Martin Pfeffer, Diethard Mattanovich, Brigitte Gasser
    FEMS Microbiology Reviews.2013; 37(6): 872.     CrossRef
  • Phylogenetic and phenotypic characterisation of the 3-ketoacyl-CoA thiolase gene family from the opportunistic human pathogenic fungusCandida albicans
    Christian Otzen, Sebastian Müller, Ilse D. Jacobsen, Matthias Brock
    FEMS Yeast Research.2013; 13(6): 553.     CrossRef
  • Bilateral Candida and Atypical Mycobacterial Infection After Frontalis Sling Suspension With Silicone Rod to Correct Congenital Ptosis
    Brett W. Davies, Emily M. Bratton, Vikram D. Durairaj, Eric M. Hink
    Ophthalmic Plastic & Reconstructive Surgery.2013; 29(4): e111.     CrossRef
  • Nitrogen source and growth stage of Candida albicans influence expression level of vacuolar aspartic protease Apr1p and carboxypeptidase Cpy1p
    Václava Bauerová, Iva Pichová, Olga Hrušková-Heidingsfeldová
    Canadian Journal of Microbiology.2012; 58(5): 678.     CrossRef
  • Pharmacotherapy approaches to antifungal prophylaxis
    Tzi Bun Ng, Randy Chi Fai Cheung, Xiu juan Ye, Evandro Fei Fang, Yau Sang Chan, Wen Liang Pan, Xiu Li Dan, Cui Ming Yin, Sze Kwan Lam, Peng Lin, Patrick Hung Kui Ngai, Li Xin Xia, Fang Liu, Xiu Yun Ye, He Xiang Wang, Jack Ho Wong
    Expert Opinion on Pharmacotherapy.2012; 13(12): 1695.     CrossRef
  • Farnesol and Cyclic AMP Signaling Effects on the Hypha-to-Yeast Transition in Candida albicans
    Allia K. Lindsay, Aurélie Deveau, Amy E. Piispanen, Deborah A. Hogan
    Eukaryotic Cell.2012; 11(10): 1219.     CrossRef
  • Chimerization of lactoferricin and lactoferrampin peptides strongly potentiates the killing activity against Candida albicans1This article is part of a Special Issue entitled Lactoferrin and has undergone the Journal's usual peer review process.
    Jan Bolscher, Kamran Nazmi, Jan van Marle, Wim van ‘t Hof, Enno Veerman
    Biochemistry and Cell Biology.2012; 90(3): 378.     CrossRef
  • Quaternary ammonium silane-functionalized, methacrylate resin composition with antimicrobial activities and self-repair potential
    Shi-qiang Gong, Li-na Niu, Lisa K. Kemp, Cynthia K.Y. Yiu, Heonjune Ryou, Yi-pin Qi, John D. Blizzard, Sergey Nikonov, Martha G. Brackett, Regina L.W. Messer, Christine D. Wu, Jing Mao, L. Bryan Brister, Frederick A. Rueggeberg, Dwayne D. Arola, David H.
    Acta Biomaterialia.2012; 8(9): 3270.     CrossRef
  • Macrophage Autophagy in Immunity to Cryptococcus neoformans and Candida albicans
    André Moraes Nicola, Patrícia Albuquerque, Luis R. Martinez, Rafael Antonio Dal-Rosso, Carolyn Saylor, Magdia De Jesus, Joshua D. Nosanchuk, Arturo Casadevall, G. S. Deepe
    Infection and Immunity.2012; 80(9): 3065.     CrossRef
  • Efficacy and toxicity of a tropically stable lipid-based formulation of amphotericin B (iCo-010) in a rat model of invasive candidiasis
    Fady Ibrahim, Pavel Gershkovich, Olena Sivak, Ellen K. Wasan, Karen Bartlett, Kishor M. Wasan
    International Journal of Pharmaceutics.2012; 436(1-2): 318.     CrossRef
  • Effectiveness of the Association of 2 Probiotic Strains Formulated in a Slow Release Vaginal Product, in Women Affected by Vulvovaginal Candidiasis
    Franco Vicariotto, Mario Del Piano, Luca Mogna, Giovanni Mogna
    Journal of Clinical Gastroenterology.2012; 46: S73.     CrossRef
  • Germling fusion via conidial anastomosis tubes in the grey mould Botrytis cinerea requires NADPH oxidase activity
    M. Gabriela Roca, Martin Weichert, Ulrike Siegmund, Paul Tudzynski, André Fleißner
    Fungal Biology.2012; 116(3): 379.     CrossRef
  • Inn1 and Cyk3 regulate chitin synthase during cytokinesis in budding yeasts
    Asli Devrekanli, Magdalena Foltman, Cesar Roncero, Alberto Sanchez-Diaz, Karim Labib
    Journal of Cell Science.2012;[Epub]     CrossRef
  • Sensitization of Candida albicans biofilms to various antifungal drugs by cyclosporine A
    Ravikumar B Shinde, Nitin M Chauhan, Jayant S Raut, Sankunny M Karuppayil
    Annals of Clinical Microbiology and Antimicrobials.2012;[Epub]     CrossRef
  • Raman Microspectroscopy of the Yeast Vacuoles
    Lucie Bednárová, Jan Palacký, Václava Bauerová, Olga Hrušková-Heidingsfeldová, Iva Pichová, Peter Mojzeš
    Journal of Spectroscopy.2012; 27(5-6): 503.     CrossRef
  • Complexity and dynamics of host–fungal interactions
    Fabien Cottier, Norman Pavelka
    Immunologic Research.2012; 53(1-3): 127.     CrossRef
  • Flexible Survival Strategies of Pseudomonas aeruginosa in Biofilms Result in Increased Fitness Compared with Candida albicans
    Frauke Gina Purschke, Ekkehard Hiller, Iris Trick, Steffen Rupp
    Molecular & Cellular Proteomics.2012; 11(12): 1652.     CrossRef
  • Exploring the possible applications of catechin (gel) for oral care of the elderly and disabled individuals
    Muneaki Tamura, Kuniyasu Ochiai
    Japanese Dental Science Review.2012; 48(2): 126.     CrossRef
  • Enhancement of anti-candidal activity of endophytic fungus Phomopsis sp. ED2, isolated from Orthosiphon stamineus Benth, by incorporation of host plant extract in culture medium
    Tong Woei Yenn, Chong Chai Lee, Darah Ibrahim, Latiffah Zakaria
    Journal of Microbiology.2012; 50(4): 581.     CrossRef
  • Candida albicans Isolates from the Gut of Critically Ill Patients Respond to Phosphate Limitation by Expressing Filaments and a Lethal Phenotype
    Kathleen Romanowski, Alexander Zaborin, Vesta Valuckaite, Ronda J. Rolfes, Trissa Babrowski, Cindy Bethel, Andrea Olivas, Olga Zaborina, John C. Alverdy, Neeraj Chauhan
    PLoS ONE.2012; 7(1): e30119.     CrossRef
Research Support, Non-U.S. Gov't
Bacterial Endophyte Sphingomonas sp. LK11 Produces Gibberellins and IAA and Promotes Tomato Plant Growth
Abdul Latif Khan , Muhammad Waqas , Sang-Mo Kang , Ahmed Al-Harrasi , Javid Hussain , Ahmed Al-Rawahi , Salima Al-Khiziri , Ihsan Ullah , Liaqat Ali , Hee-Young Jung , In-Jung Lee
J. Microbiol. 2014;52(8):689-695.   Published online July 4, 2014
DOI: https://doi.org/10.1007/s12275-014-4002-7
  • 1,177 View
  • 0 Download
  • 327 Crossref
AbstractAbstract PDF
Plant growth promoting endophytic bacteria have been identified as potential growth regulators of crops. Endophytic bacterium, Sphingomonas sp. LK11, was isolated from the leaves of Tephrosia apollinea. The pure culture of Sphingomonas sp. LK11 was subjected to advance chromatographic and spectroscopic techniques to extract and isolate gibberellins (GAs). Deuterated standards of [17, 17-2H2]-GA4, [17, 17-2H2]-GA9 and [17, 17-2H2]-GA20 were used to quantify the bacterial GAs. The analysis of the culture broth of Sphingomonas sp. LK11 revealed the existence of physiologically active gibberellins (GA4: 2.97 ± 0.11 ng/ml) and inactive GA9 (0.98 ± 0.15 ng/ml) and GA20 (2.41 ± 0.23). The endophyte also produced indole acetic acid (11.23 ± 0.93 μM/ml). Tomato plants inoculated with endophytic Sphingomonas sp. LK11 showed significantly increased growth attributes (shoot length, chlorophyll contents, shoot, and root dry weights) compared to the control. This indicated that such phyto-hormones-producing strains could help in increasing crop growth.

Citations

Citations to this article as recorded by  
  • Silicon: A valuable soil element for improving plant growth and CO2 sequestration
    Abdul Latif Khan
    Journal of Advanced Research.2025; 71: 43.     CrossRef
  • Biochar-based fertilizer enhanced tobacco yield and quality by improving soil quality and soil microbial community
    Shen Yan, Peng Wang, Xianjie Cai, Chuliang Wang, Lukas Van Zwieten, Hailong Wang, Quanyu Yin, Guoshun Liu, Tianbao Ren
    Environmental Technology & Innovation.2025; 37: 103964.     CrossRef
  • Contributions of the dark septate endophyte extracellular metabolites to plant growth, metabolism and root-associated microbial community structure
    Yinli Bi, Shuhui Wang, Yaning Song, Hai Tan, Peter Christie
    Plant and Soil.2025; 511(1-2): 189.     CrossRef
  • The control effect of endophytic fungus Fusarium equiseti FUS-8 on cotton Verticillium wilt and its effects on soil microbial communities
    Yun Zhang, Chao Xue, Xin Wang, Jianhua Zhang, Aiyu Wang, Yuanxue Yang, Xi Jia, Wenjuan Zhang, Ming Zhao
    Plant and Soil.2025; 512(1-2): 1221.     CrossRef
  • Insect residual streams supplement improves chili pepper growth: Insights into the role of rhizosphere soil microbiome and metabolome
    Hanghai Zhou, Xusong Zheng, Zhigang Zhu, Qi Shen, Chenghu Yang, Lijia Jiang, Hua Li, Yuxue Liu, Xiaohong Yao, Hong Sun, Xin Wang, Chunfang Zhang, Yifei Wu, Jiangwu Tang
    Applied Soil Ecology.2025; 206: 105838.     CrossRef
  • Soybean nodulation shapes the rhizosphere microbiome to increase rapeseed yield
    Yu Liu, Qin Han, Jiaming Zhang, Xuehai Zhang, Yuqin Chen, Mingbo Li, Yongfang Hao, Yujie Hong, Ruizhen Tang, Brett J. Ferguson, Peter M. Gresshoff, Jie Kuai, Guangsheng Zhou, Xia Li, Hongtao Ji
    Journal of Advanced Research.2025; 75: 95.     CrossRef
  • Evaluation of bacterial bioagents for controlling gray mold disease in tomatoes and promoting crop health
    Md Mosaddekur Rahman, Najeeb M. Almasoudi, Khalid A. Asiry, Kamal A. M. Abo-Elyousr
    Egyptian Journal of Biological Pest Control.2025;[Epub]     CrossRef
  • Manipulation of root-associated bacterial endophytes for sustainable crop production system: A review
    Maqsood Ahmed Khaskheli, Mir Muhammad Nizamani, Entaj Tarafder, Diptosh Das, Ghulam Muhae-Ud-Din, Raheel Ahmed Khaskheli, Yong Wang
    Rhizosphere.2025; 33: 101044.     CrossRef
  • From microbiome to biostimulants: unlocking the potential of tomato root endophytes
    Francesco Maria Fagnano, Valeria Ventorino, Edoardo Pasolli, Ida Romano, Patrizia Ambrosino, Olimpia Pepe
    BMC Plant Biology.2025;[Epub]     CrossRef
  • Core Bacterial Communities in the Endosphere of Lettuce (Lactuca sativa): A Comparative Study of Roots and Leaves
    Gulnaz Galieva, Polina Kuryntseva, Polina Galitskaya, Svetlana Selivanovskaya, G. Devi, M. Sadriddinov, G. Khalmatjanova
    BIO Web of Conferences.2025; 160: 02030.     CrossRef
  • Phytostabilization potential and microbial response to the reclamation of native Cynodon dactylon in spoil heaps from a multiple-metal mining site in Southwest China
    Bowen Wang, Yanying Guo, Xuejiao Li, Chaoqin Dong, Haixian Sha, Haiyan Li, Zhiwei Zhao, Tao Li
    Journal of Environmental Management.2025; 378: 124758.     CrossRef
  • Microbial biobank-based strain phenotyping efficiently identifies plant growth-promoting bacteria from citrus rhizosphere
    Hongfei Li, Yuanfa Wang, Lile Deng, Zhiyong Pan
    Horticulture Advances.2025;[Epub]     CrossRef
  • Impact of organic liquid fertilizer on plant growth of Chinese cabbage and soil bacterial communities
    Junkyung Lee, Na-Yeon Jo, Su-Yeon Shim, Tran Yen Linh Le, Woo Yong Jeong, Ki Wung Kwak, Hyun Sik Choi, Byong-O Lee, Soo-Ryang Kim, Myung-Gyu Lee, Sun-Goo Hwang
    Scientific Reports.2025;[Epub]     CrossRef
  • Keystone root bacteria in Ambrosia artemisiifolia promote invasive growth by increasing the colonization rate of Funneliformis mosseae
    Chunying Li, Xue Chen, Jieyu Yang, Jun Li, Ruiyue Wang, Haiyun Xu, Fengjuan Zhang
    Microbiological Research.2025; 293: 128081.     CrossRef
  • Microbiome analysis uncovers fruit-specific microbial community divergence between wild and cultivated watermelon varieties
    Yutong Liu, Yang Yang, Xiajing Zhang, Zhongyuan Hu, Mingfang Zhang, Jinghua Yang
    Vegetable Research.2025;[Epub]     CrossRef
  • Foliar infections by Botrytis cinerea modulate the tomato root volatilome and microbiome
    Muhammad Syamsu Rizaludin, Ana Shein Lee Díaz, Hans Zweers, Jos M Raaijmakers, Paolina Garbeva
    FEMS Microbiology Ecology.2025;[Epub]     CrossRef
  • Dynamic shifts and functional insights into bacterial communities during the aplanospore stage of Haematococcus lacustris
    Mehwish Taj, Ve Van Le, Ji Eun Jeong, Hee-Mock Oh, Man-Young Jung, Sang-Ah Lee
    Journal of Applied Phycology.2025; 37(2): 795.     CrossRef
  • Combined improvement of coastal saline-alkali soils by biochar and Azotobacter chroococcum: Effects and mechanisms
    Jinju Hou, Jiawen Tang, Xiaotong Zhang, Shudong Zhang, Qiuzhuo Zhang
    Applied Soil Ecology.2025; 212: 106214.     CrossRef
  • Biofertilizers Enhance Soil Fertility and Crop Yields Through Microbial Community Modulation
    Xu Zhang, Lei Zhang, Junjie Liu, Zongzuan Shen, Zhuxiu Liu, Haidong Gu, Xiaojing Hu, Zhenhua Yu, Yansheng Li, Jian Jin, Guanghua Wang
    Agronomy.2025; 15(7): 1572.     CrossRef
  • Biomimetic synthesis of TiO2 nanoparticles by Sphingomonas sp. and their cytotoxicity assessment on Allium cepa root tips
    Karpaga Valli Arumugam, S.Venkat Kumar
    Sustainable Chemistry One World.2025; 7: 100076.     CrossRef
  • Panchagavya-enhanced microbial biodegradation of steel slag: A sustainable phytoremediation approach
    AnjaniKumar S.V. Brahmandam, Khanindra Pathak, Varaprasad Kasa, Brajesh Kumar Dubey
    International Biodeterioration & Biodegradation.2025; 205: 106162.     CrossRef
  • Cooperative Interplay Between PGPR and Trichoderma longibrachiatum Reprograms the Rhizosphere Microecology for Improved Saline Alkaline Stress Resilience in Rice Seedlings
    Junjie Song, Xueting Guan, Lili Chen, Zhouqing Han, Haojun Cui, Shurong Ma
    Microorganisms.2025; 13(7): 1562.     CrossRef
  • Debaryomyces hansenii Enhances Growth, Nutrient Uptake, and Yield in Rice Plants (Oryza sativa L.) Cultivated in Calcareous Soil
    Jorge Núñez-Cano, Francisco J. Ruiz-Castilla, José Ramos, Francisco J. Romera, Carlos Lucena
    Agronomy.2025; 15(7): 1696.     CrossRef
  • Co-inoculation of Bacillus amyloliquefaciens and Pleurotus ostreatus alleviates replanting obstacles in continuously cropped soil by enhancing the soil nutrient cycle and beneficial microorganisms
    Xue Luo, Man Xu, Xin-Li Yan, Rui Xing, Yi-Jin Kang, Hong-Wei Wang
    Rhizosphere.2025; 36: 101175.     CrossRef
  • GmSPX5 regulates arbuscular mycorrhizal colonization and phosphate acquisition through modifying transcription profile and microbiome in soybean
    Xingqi Yang, Yuanyuan Li, Tianqi Wang, Zipei Li, Qingli Zhuang, Cuiyue Liang, Xiurong Wang, Jiang Tian
    The Plant Journal.2025;[Epub]     CrossRef
  • Influence of Agricultural Practices on Soil Physicochemical Properties and Rhizosphere Microbial Communities in Apple Orchards in Xinjiang, China
    Guangxin Zhang, Zili Wang, Huanhuan Zhang, Xujiao Li, Kun Liu, Kun Yu, Zhong Zheng, Fengyun Zhao
    Horticulturae.2025; 11(8): 891.     CrossRef
  • Transient colonization by Priestia megaterium B1L5 alters the structure of the rhizosphere microbiome towards potential plant beneficial bacterial groups in apple plantlets
    Fatma M. Mahmoud, Holger Edelmann, Yang Si, Lea Endrejat, Karin Pritsch, Caroline Gutjahr, Armin Ehrenreich, Traud Winkelmann, Jana Barbro Winkler, Jörg‑Peter Schnitzler, Michael Schloter
    Environmental Microbiome.2025;[Epub]     CrossRef
  • Changes in the Structure of Strawberry Leaf Surface Bacterial and Fungal Communities by Plant Biostimulants
    Ji Yoon Lee, Hyeran Shin, Juhyun Yu, Hyun Gi Kong
    Microorganisms.2025; 13(11): 2461.     CrossRef
  • Positive impact of hydroponics and artificial light on yield and quality of wheat
    Simona Bassu, Sebastian Eichelsbacher, Francesco Giunta, Rosella Motzo, Corinna Dawid, Martina Gastl, Michael Schloter, Katharina A. Scherf, Stefan Hör, Yuri Pinheiro Alves De Souza, Stefanie Schulz, Timo D. Stark, Volker Mohler, Senthold Asseng
    Scientific Reports.2025;[Epub]     CrossRef
  • Chitosan-modified biochar and root exudates of rapes (Brassica napus L.) synergistically remediate cadmium-contaminated soil
    Lu Wang, Qilei Li, Sheng Zhai, Shengkai Yu, Qiong Lu, Qibin Zhang, Juyuan Wang
    Environmental Geochemistry and Health.2025;[Epub]     CrossRef
  • Role of Bacterial Endophytes in Bioremediation, Crop Improvement and Stress Management
    Rajosik Bose, Harsh Dubey, Ayan Samadder, Smarto Basak, Sreya Dutta, Ranjit Kumar Dey, Amit Kumar Dixit, Shiddamallayya Mathapati, Sanjaya Kumar Y.R, Gajji Babu, Narayanam Srikanth, Rabinarayan Acharya, Susmita Roy
    Journal of Crop Health.2025;[Epub]     CrossRef
  • Humalite shapes the wheat rhizosphere soil microbiome by altering microbial community structure, diversity, and network stability
    Pramod Rathor, Chathuranga De Silva, Rhea Amor Lumactud, Linda Yuya Gorim, Sylvie A. Quideau, Malinda S. Thilakarathna
    Applied Soil Ecology.2025; 215: 106414.     CrossRef
  • HR-LCMS profiling, in vitro and in silico assessment of the antibacterial activities of endophytic Bacillus amyloliquefaciens NWR-14 from Piper chaba W. Hunter
    Sijo Asokan, Teena Jacob, Tijo Cherian, Teena Merlin, Vivekanandhan S, Afaf A AlSosowaa, Mostafa Mohammed Atiyah, Faheem Q Al-Mojahid, Willie J.G.M. Peijnenburg, Smitha Vijayan
    Phytomedicine Plus.2025; 5(4): 100885.     CrossRef
  • Toward a plant biotechnological application of phyllosphere bacteria
    Rikako Hirata, Yuga Fujinawa, Akira Mine
    Plant Biotechnology.2025; 42(3): 251.     CrossRef
  • Quorum quenching by endophytic Bacillus cereus AL1: a lactonase-based anti-virulence strategy against Pseudomonas aeruginosa
    Alaa A. Fawzy, Marwa M. Raafat, R. Mahmoud, Omneya M. Helmy
    BMC Microbiology.2025;[Epub]     CrossRef
  • The role of endophytes in plant heavy metal accumulation: The detailed insights towards phytoremediation enhancement
    Guili Yang, Jen-How Huang, Xin Wang, Kang Mao, Zhiqun Chen, Huijiao Liu, Aijuan Tan, Xiangjun Pei
    Journal of Environmental Chemical Engineering.2025; 13(6): 119636.     CrossRef
  • Combined metagenomics and metabolomic analysis of microbial community structure and metabolic function in continuous soybean cropping soils of Songnen Plain, China
    Letian Xu, Shun Jin, Yue Su, Xiaochen Lyu, Shuangshuang Yan, Chang Wang, Liang Cao, Chao Yan, Chunmei Ma
    Chemical and Biological Technologies in Agriculture.2024;[Epub]     CrossRef
  • Effects of the decomposition agent application on the physicochemical properties and microbial community structure of wheat straw-returning soil
    Jiaxuan Han, Xinyu Song, Haiyan Fu, Chunguang Liu, Fengshan Yang
    Environmental Technology & Innovation.2024; 35: 103668.     CrossRef
  • Divergence and convergence in epiphytic and endophytic phyllosphere bacterial communities of rice landraces
    Pratibha Sanjenbam, Deepa Agashe, Maria L. Marco
    mSphere.2024;[Epub]     CrossRef
  • Response of Plant Endophyte Communities to Heavy Metal Stress and Plant Growth Promotion by the Endophyte Serratia marcescens (Strain JG1)
    Jiayi Liu, Chao Liu, Jiaxin Zheng, Xiaoxia Zhang, Kang Zheng, Jiayao Zhuang
    Plants.2024; 13(19): 2755.     CrossRef
  • UV-C Exposure Enhanced the Cd2+ Adsorption Capability of the Radiation-Resistant Strain Sphingomonas sp. M1-B02
    Yunshi Li, Haoyuan Niu, Shuang Li, Ming Yue, Gaosen Zhang
    Microorganisms.2024; 12(12): 2620.     CrossRef
  • The plant endomicrobiome: Structure and strategies to produce stress resilient future crop
    Shobhit Raj Vimal, Jay Shankar Singh, Ashwani Kumar, Sheo Mohan Prasad
    Current Research in Microbial Sciences.2024; 6: 100236.     CrossRef
  • Amorphous silica fertilization ameliorated soil properties and promoted putative soil beneficial microbial taxa in a wheat field under drought
    Simon Lewin, Joerg Schaller, Steffen Kolb, Davide Francioli
    Applied Soil Ecology.2024; 196: 105286.     CrossRef
  • Alleviation of Drought Stress by Plant Growth-Promoting Rhizobacteria (PGPR) in Crop Plants: A Review
    Khyati Harkhani, Anish Kumar Sharma
    Communications in Soil Science and Plant Analysis.2024; 55(5): 735.     CrossRef
  • Enhancing rice growth and yield with weed endophytic bacteria Alcaligenes faecalis and Metabacillus indicus under reduced chemical fertilization
    Kaniz Fatema, Nur Uddin Mahmud, Dipali Rani Gupta, Md. Nurealam Siddiqui, Tahsin Islam Sakif, Aniruddha Sarker, Andrew G. Sharpe, Tofazzal Islam, Sofia Isabel Almeida Pereira
    PLOS ONE.2024; 19(5): e0296547.     CrossRef
  • Morphological, Metabolomic and Genomic Evidences on Drought Stress Protective Functioning of the Endophyte Bacillus safensis Ni7
    Silju Juby, P. Soumya, K. Jayachandran, E. K. Radhakrishnan
    Current Microbiology.2024;[Epub]     CrossRef
  • Inoculation with PGPR co-fermented broths promotes growth, yields, and quality of pepper by increasing soil nutrients and changing soil bacterial community
    Yujie Han, Lei Tian, Yu Luo, Lizhen Han
    Journal of Applied Microbiology.2024;[Epub]     CrossRef
  • Genomic Insights into Combating Anthracnose with an Endophytic Bacillus amyloliquefaciens Strain
    Haiyan Zhang, Jie Zhang, Yao Tong, Zhiyuan Luan, Jiexi Hou, Fenggang Luan
    Plant Disease.2024; 108(7): 1976.     CrossRef
  • Effect of macrophyte biomass-based vermicompost and vermicompost tea on plant growth, productivity, and biocontrol of Fusarium wilt disease in tomato
    Ali Mohd Yatoo, Md Niamat Ali, Zahoor Ahmad Baba, Abdullah S. Alsohim, M. Muthukumaran, R.Z. Sayyed
    Biocatalysis and Agricultural Biotechnology.2024; 60: 103320.     CrossRef
  • The seeds of invasion: a comparison of endophytic seed bacteria of Acacia longifolia between its native and invasive ranges
    Mónica Condessa, Joana G. Jesus, Cristina Máguas, Johannes J. Le Roux, Helena Trindade
    Symbiosis.2024; 93(1): 29.     CrossRef
  • Effect of Organic and Chemical Fertilizer on the Diversity of Rhizosphere and Leaf Microbial Composition in Sunflower Plant
    Babitha Joseph, Subramanian Babu
    Current Microbiology.2024;[Epub]     CrossRef
  • Invisible Inhabitants of Plants and a Sustainable Planet: Diversity of Bacterial Endophytes and their Potential in Sustainable Agriculture
    Masrure Alam, Baishali Pandit, Abdul Moin, Umaimah Nuzhat Iqbal
    Indian Journal of Microbiology.2024; 64(2): 343.     CrossRef
  • Dynamic microbial regulation of triiron tetrairon phosphate nanomaterials in the tomato rhizosphere
    Liya Jiao, Le Yue, Xiehui Le, Xuesong Cao, Feiran Chen, Chuanxi Wang, Xiaoli Zhang, Hua Zou, Zhenyu Wang
    Environmental Science: Nano.2024; 11(3): 1157.     CrossRef
  • Shifts in Structure and Assembly Processes of Root Endophytic Community Caused by Climate Warming and Precipitation Increase in Alpine Grassland
    Xiaoting Wei, Bing Han, Jinxin Zhang, Xinqing Shao
    Microorganisms.2024; 12(9): 1780.     CrossRef
  • Bacillus velezensis LY7 promotes pepper growth and induces resistance to Colletotrichum scovillei
    Xiaolu Zou, Junqi Ning, Xiaojun Zhao, Hong Lv, Nan Qin, Hui Yin, Lu Ren
    Biological Control.2024; 192: 105480.     CrossRef
  • Rhizobacterial volatile organic compounds: Implications for agricultural ecosystems' nutrient cycling and soil health
    Faryal Babar Baloch, Nan Zeng, Haiyang Gong, Zhiyong Zhang, Ning Zhang, Sadia Babar Baloch, Shahzaib Ali, Bingxue Li
    Heliyon.2024; 10(23): e40522.     CrossRef
  • Continuous cropping of potato changed the metabolic pathway of root exudates to drive rhizosphere microflora
    Yanhong Xing, Pingliang Zhang, Wenming Zhang, Chenxu Yu, Zhuzhu Luo
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • Combined application of melatonin and Bacillus sp. strain IPR-4 ameliorates drought stress tolerance via hormonal, antioxidant, and physiomolecular signaling in soybean
    Odongkara Peter, Muhammad Imran, Shifa Shaffique, Sang-Mo Kang, Nkulu Kabange Rolly, Chebitok Felistus, Saqib Bilal, Zhao Dan-Dan, Md. Injamum-Ul-Hoque, Eun-Hae Kwon, Mohammad Nazree Mong, Ho-Jun Gam, Won-Chan- Kim, In-Jung Lee
    Frontiers in Plant Science.2024;[Epub]     CrossRef
  • Microalgal bioinoculants for sustainable agriculture and their interactions with soil biotic and abiotic components: A review
    Shisy JOSE, Nirmal RENUKA, Sachitra Kumar RATHA, Sheena KUMARI, Faizal BUX
    Pedosphere.2024; 34(2): 297.     CrossRef
  • Plant endophytes: unveiling hidden applications toward agro-environment sustainability
    Rajeshwari Negi, Babita Sharma, Sanjeev Kumar, Kundan Kumar Chaubey, Tanvir Kaur, Rubee Devi, Ashok Yadav, Divjot Kour, Ajar Nath Yadav
    Folia Microbiologica.2024; 69(1): 181.     CrossRef
  • Multiple Omics investigation into the regulatory mechanisms of tobacco growth and quality by transplanting period
    Guangwei Sun, Yang Liu, Wei Nie, Yuhai Du, Jingguo Sun, Zhenguo Chen, Liguang Chai, Daisong Liu, Zongpeng Zhao, Aizhong Deng, Qiang Zhang, Chuandong Jiang
    Industrial Crops and Products.2024; 217: 118846.     CrossRef
  • Changes in Endophyte Communities across the Different Plant Compartments in Response to the Rice Blast Infection
    Mehwish Roy, Sravanthi Goud Burragoni, Junhyun Jeon
    The Plant Pathology Journal.2024; 40(3): 299.     CrossRef
  • Potential of the quorum‐quenching and plant‐growth promoting halotolerant Bacillus toyonensisAA1EC1 as biocontrol agent
    Amalia Roca, Mónica Cabeo, Carlos Enguidanos, Fernando Martínez‐Checa, Inmaculada Sampedro, Inmaculada Llamas
    Microbial Biotechnology.2024;[Epub]     CrossRef
  • The beneficial endophytic microbes enhanced tobacco defense system to resist bacterial wilt disease
    Jiemeng Tao, Mengli Gu, Shizhou Yu, Jingjing Shi, Lingtong Cheng, Jingjing Jin, Peng Lu, Jianfeng Zhang, He Li, Peijian Cao
    Chemical and Biological Technologies in Agriculture.2024;[Epub]     CrossRef
  • Influence of biochar on the arsenic phytoextraction potential of Pteris vittata in soils from an abandoned arsenic mining site
    Guanghui Guo, Shiqi Chen, Degang Zhang, Jing Wang, Mei Lei, Tienan Ju, Heng Wei
    Chemosphere.2024; 352: 141389.     CrossRef
  • Active microbial population dynamics and life strategies drive the enhanced carbon use efficiency in high-organic matter soils
    Qicheng Xu, Ling Li, Junjie Guo, Hanyue Guo, Manqiang Liu, Shiwei Guo, Yakov Kuzyakov, Ning Ling, Qirong Shen, Jennifer B. H. Martiny, Bruce A. Hungate
    mBio.2024;[Epub]     CrossRef
  • Endophytic Microorganisms in Tomato Roots, Changes in the Structure and Function of the Community at Different Growing Stages
    Yufei Wei, Siyu Chen, Xinyan Zhou, Diancao Ding, Jingjing Song, Shangdong Yang
    Microorganisms.2024; 12(6): 1251.     CrossRef
  • Impacts of nano-acetamiprid pesticide on faba bean root metabolic response and soil health
    Ying Ding, Mengna Tao, Lanqing Xu, Chuanxi Wang, Jinghong Wang, Chunjie Zhao, Zhenggao Xiao, Zhenyu Wang
    Science of The Total Environment.2024; 927: 171976.     CrossRef
  • Integrative analysis of microbiome and metabolome revealed the effect of microbial inoculant on microbial community diversity and function in rhizospheric soil under tobacco monoculture
    Xianjun Lai, Wangjun Duan, Wenyou Zhang, Zhengsong Peng, Xianjun Wang, Haiyan Wang, Xiaobo Qi, Huaqiang Pi, Kailu Chen, Lang Yan, Florian M. Freimoser
    Microbiology Spectrum.2024;[Epub]     CrossRef
  • Unlocking Zn biofortification: leveraging high-Zn wheat and rhizospheric microbiome interactions in high-pH soils
    Jun Yang, Chenrui Liu, Runze Wang, Junfeng Xu, Cui Huang, Wenxiang Wang, Siqi Zhang, Wenting She, Xuemei Zhang, Mei Shi, Eduardo Moreno-Jiménez, Yinglong Chen, Zhaohui Wang
    Biology and Fertility of Soils.2024; 60(7): 969.     CrossRef
  • Plant-associated bacteria of Syringa vulgaris L. in an urban environment
    Elena A. Tsavkelova, Olga A. Churikova, Elena A. Volynchikova, Sofia S. Sapun, Maria R. Leontieva, Anna S. Speranskaya, Evgenii A. Konorov, Anastasia A. Krinitsina
    Plant and Soil.2024; 497(1-2): 585.     CrossRef
  • Unveiling the multifaceted potential of Pseudomonas khavaziana strain SR9: a promising biocontrol agent for wheat crown rot
    Shengzhi Guo, Yuqi Liu, Yanling Yin, Yating Chen, Siyu Jia, Tong Wu, Jun Liao, Xinyan Jiang, Hafiz Abdul Kareem, Xuejun Li, Junfeng Pan, Yao Wang, Xihui Shen, Frédérique Reverchon, Sandra Tienda
    Microbiology Spectrum.2024;[Epub]     CrossRef
  • Growth promotion and modulation of the soybean microbiome INTACTA RR PRO with the application of the fungi Trichoderma harzianum and Purpureocillum lilacinum
    Everlon Cid Rigobelo, Lucas Amoroso Lopes de Carvalho, Carlos Henrique Barbosa Santos, Edvan Teciano Frezarin, Daniel Guariz Pinheiro, Daniel Nicodemo, Olubukola Oluranti Babalola, Nicolas Desoignies
    Scientific Reports.2024;[Epub]     CrossRef
  • Harnessing the potential of nitrogen-fixing cyanobacteria: A rich bio-resource for sustainable soil fertility and enhanced crop productivity
    Taufiq Nawaz, Nitish Joshi, Dillon Nelson, Shah Saud, Nader R. Abdelsalam, Mohamed M.A. Abdelhamid, Mariusz Jaremko, Tanzeel Ur Rahman, Shah Fahad
    Environmental Technology & Innovation.2024; 36: 103886.     CrossRef
  • Unraveling the Role of Plant Growth Regulators and Plant Growth Promoting Rhizobacteria in Phytoremediation
    Sadaf Jan, Renu Bhardwaj, Neeta Raj Sharma, Rattandeep Singh
    Journal of Plant Growth Regulation.2024; 43(8): 2471.     CrossRef
  • Plant Growth Promoting Rhizobacteria: Their potential in sustainable Agriculture
    Aarti, Sujata, Shivam Parmar, Anil Kumar*
    Journal of Science Innovations and Nature of Earth.2024; 4(2): 40.     CrossRef
  • Effect of Plant Growth Promoting Rhizobacteria on the Development and Biochemical Composition of Cucumber under Different Substrate Moisture Levels
    Gerardo Zapata-Sifuentes, Manuel Fortis-Hernández, Jorge Sáenz-Mata, Christian Silva-Martínez, Liliana Lara-Capistran, Pablo Preciado-Rangel, Luis Guillermo Hernández-Montiel
    Microbiology Research.2024; 15(3): 1505.     CrossRef
  • Inoculation effect of heavy metal tolerant and plant growth promoting rhizobacteria for rhizoremediation
    S. Y. Lee, Y.-Y. Lee, K.-S. Cho
    International Journal of Environmental Science and Technology.2024; 21(2): 1419.     CrossRef
  • Combating wheat yellow mosaic virus through microbial interactions and hormone pathway modulations
    Fangyan Wang, Haoqing Zhang, Hongwei Liu, Chuanfa Wu, Yi Wan, Lifei Zhu, Jian Yang, Peng Cai, Jianping Chen, Tida Ge
    Microbiome.2024;[Epub]     CrossRef
  • Soil microbial community composition by crop type under rotation diversification
    Donglin Zong, Yefu Zhou, Jing Zhou, Yanan Zhao, Xiaokang Hu, Tao Wang
    BMC Microbiology.2024;[Epub]     CrossRef
  • Quality analysis and function prediction of soil microbial communities of Polygonatum cyrtonema in two indigenous-origins
    Li Yang, Qing Yang, Jiansang Wulu, Yue Wang, Wenfang Jin, Zhigang Yan, Zhifeng Zhang
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • DESENVOLVIMENTO DE Urochloa ruziziensis SUBMETIDA À INOCULAÇÃO COM BACTÉRIAS PROMOTORAS DE CRESCIMENTO VEGETAL
    Iuri Beltrão Naves, Danilo José Santos Gomes, Marihus Altoé Baldotto, Lílian Estrela Borges Baldotto
    Revista Contemporânea.2024; 4(10): e6199.     CrossRef
  • Effects of functional microbial agents on the microbial community and fertility of reclaimed soil in a coal mining area
    Zixu Li, Jianhua Li, Tingting Li, Qiang Zhang, Chunhua Gao, Jinjing Lu, Dongsheng Jin, Minggang Xu
    Environmental Technology & Innovation.2024; 36: 103891.     CrossRef
  • From Microscopy to Omics: A Comprehensive Review of Tools and Techniques in Studying Endophytic Adaptation Under Abiotic and Biotic Stress
    Rajinder Kaur, Charanjit Kaur, Gursharan Kaur, Jaspreet Kaur, Santosh Kumar Rath, Vagish Dwibedi
    Journal of Plant Growth Regulation.2024;[Epub]     CrossRef
  • Endophytic Bacteria Improves the Growth of Tomato Plants: An Initial Trial Towards Sustainable Agriculture
    Yasir Sidiq, Arbiatun Nurlaili Assyifa, Triastuti Rahayu, Kistantia Elok Mumpuni
    IOP Conference Series: Earth and Environmental Science.2024; 1357(1): 012015.     CrossRef
  • Microbial Biofortification of Grain Crops: Current State and Prospects
    Daria Kolpakova, Yuliya Serazetdinova, Natalya Fotina, Alexandra Zaushintsena, Lyudmila Asyakina, Anna Loseva
    Food Processing: Techniques and Technology.2024; : 191.     CrossRef
  • Biochar assists phytoremediation of cadmium by regulation of rhizosphere microbiome in paddy fields
    Haomin Wang, Cong Shi, Quanxi Zhang, Donggang Guo, Shuo Liu, Qilin Yu
    Environmental Technology & Innovation.2024; 36: 103757.     CrossRef
  • In preprints: hormonal stepping stones to diverging root organogenesis
    Clare Hurst, Miriam L. Gifford
    Development.2024;[Epub]     CrossRef
  • Genomic profiling and assessment of the plant growth-enhancing traits in the novel actinomycete, Plantactinospora soli sp. nov.
    Lili Wang, Zhouai Ma, Ya Zhang, Qiuyu Chen, Qi Shen, Jiaqi Yao, Chengliang Cao, Rongpeng Li, Jihong Jiang
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Diversity and Plant Growth Properties of Rhizospheric Bacteria Associated with Medicinal Plants
    Dilfuza Jabborova, Bakhodir Mamarasulov, Kakhramon Davranov, Yuriy Enakiev, Neha Bisht, Sachidanand Singh, Svilen Stoyanov, Amar P. Garg
    Indian Journal of Microbiology.2024; 64(2): 409.     CrossRef
  • Exploring the root-associated microbiome of the resurrection plant Myrothamnus flabellifolia
    Shandry M. Tebele, Rose A. Marks, Jill M. Farrant
    Plant and Soil.2024; 500(1-2): 53.     CrossRef
  • Use of ginger extract and bacterial inoculants for the suppression of Alternaria solani causing early blight disease in Tomato
    Sajjad Hyder, Amjad Shahzad Gondal, Anam Sehar, Aimen Razzaq Khan, Nadia Riaz, Zarrin Fatima Rizvi, Rashid Iqbal, Mohamed S. Elshikh, Khaloud M. Alarjani, Muhammed Habib ur Rahman, Muhammad Rizwan
    BMC Plant Biology.2024;[Epub]     CrossRef
  • The succession of rhizosphere microbial community in the continuous cropping soil of tobacco
    Guitong Li, Pengfei Gong, Jie Zhou, Lin Wang, Xin Song, Penghui Ding, Yunfeng Jin, Yuzhen Zhang, Xiaoqian Zhou, Jianming Yang, Zhaobao Wang, Long Yun, Jie Ren
    Frontiers in Environmental Science.2024;[Epub]     CrossRef
  • Phytoremediation of Arsenic (As) in rice plants, mediated by  strain IU31 through antioxidant responses and phytohormones synthesis
    Ihsan Ullah, Yasir Anwar, Muhammad Faisal Siddiqui, Nadiah Alsulami, Raza Ullah
    Environmental Pollution.2024; 355: 124207.     CrossRef
  • Effects of lactic acid bacteria and molasses on the fermentation quality, in vitro dry matter digestibility, and microbial community of Korshinsk peashrub (Caragana korshinskii Kom.) silages harvested at two growth stages
    Wencan Ke, Yan Wang, Marketta Rinne, Marcia de Oliveira Franco, Fuhou Li, Yufan Lin, Qing Zhang, Yimin Cai, Guijie Zhang
    Grass and Forage Science.2024; 79(1): 56.     CrossRef
  • Integrated microbiome and metabolomics analysis reveal the relationship between plant-specialized metabolites and microbial community in Phellodendron amurense
    Wanran Zhang, Ranran Gao, Lixia Tian, Zhichao Xu
    Frontiers in Plant Science.2024;[Epub]     CrossRef
  • The potential of Actinoplanes spp. for alleviating the oxidative stress induced by thallium toxicity in wheat plants
    Nashwa Hagagy, Hamada AbdElgawad
    Plant Physiology and Biochemistry.2024; 213: 108853.     CrossRef
  • Drought and salt stress mitigation in crop plants using stress-tolerant auxin-producing endophytic bacteria: a futuristic approach towards sustainable agriculture
    Sadananda Mal, Shweta Panchal
    Frontiers in Plant Science.2024;[Epub]     CrossRef
  • Prospects of Bacillus amyloliquefaciens (MZ945930) Mediated Enhancement of Capsicum annuum L. Plants Under Stress of Alternaria alternata in Terms of Physiological Traits, Thiol Content, Antioxidant Defense, and Phytohormones
    Reda E. Abdelhameed, Rabab A. Metwally, Shereen A. Soliman
    Journal of Plant Growth Regulation.2024; 43(9): 3265.     CrossRef
  • Up-regulation of growth-related gene expression in tobacco by volatile compounds released by Bacillus velezensis WSW007
    Yuxi He, Jieli Peng, Nan Jia, Xu Wang, Jia Ma, Hao Wang, Cuimian Zhang, Entao Wang, Dong Hu, Zhanwu Wang
    Scientific Reports.2024;[Epub]     CrossRef
  • Neopolyploidy has variable effects on the diversity and composition of the wild strawberry microbiome
    Thomas J. Anneberg, Nevin P. Cullen, Elizabeth M. O'Neill, Na Wei, Tia‐Lynn Ashman
    American Journal of Botany.2024;[Epub]     CrossRef
  • Bacterial community structure and co-occurrence networks in the rhizosphere and root endosphere of the grafted apple
    Hui Cao, Longxiao Xu, Jianfei Song, Mi Xun, Weiwei Zhang, Hongqiang Yang
    BMC Microbiology.2024;[Epub]     CrossRef
  • Seeds of Stevia rebaudiana Bertoni as a Source of Plant Growth-Promoting Endophytic Bacteria with the Potential to Synthesize Rebaudioside A
    Magdalena Simlat, Agata Ptak, Anita Jaglarz, Agnieszka Szewczyk, Michał Dziurka, Artur Gurgul
    International Journal of Molecular Sciences.2023; 24(3): 2174.     CrossRef
  • Effect of Arbuscular mycorrhizal fungi (AMF) inoculation on endophytic bacteria of lettuce
    Zhixiang Han, Zihua Zhang, Yingyue Li, Boyan Wang, Qingchen Xiao, Zishan Li, Xiaowan Geng, Keqing Lin, Tao Huang, Xiaoyu Li, Jin Chen
    Physiological and Molecular Plant Pathology.2023; 126: 102036.     CrossRef
  • Deciphering the mechanisms, hormonal signaling, and potential applications of endophytic microbes to mediate stress tolerance in medicinal plants
    Praveen Pandey, Arpita Tripathi, Shweta Dwivedi, Kanhaiya Lal, Tripta Jhang
    Frontiers in Plant Science.2023;[Epub]     CrossRef
  • Plants and endophytes interaction: a “secret wedlock” for sustainable biosynthesis of pharmaceutically important secondary metabolites
    Poonam Kumari, Nikky Deepa, Prabodh Kumar Trivedi, Brajesh K. Singh, Vaibhav Srivastava, Akanksha Singh
    Microbial Cell Factories.2023;[Epub]     CrossRef
  • Calendula officinalis—A Great Source of Plant Growth Promoting Endophytic Bacteria (PGPEB) and Biological Control Agents (BCA)
    Polina C. Tsalgatidou, Eirini-Evangelia Thomloudi, Kallimachos Nifakos, Costas Delis, Anastasia Venieraki, Panagiotis Katinakis
    Microorganisms.2023; 11(1): 206.     CrossRef
  • Exploration of plant growth promoting traits and regulatory mechanisms of Bacillus anthracis PM21 in enhancing salt stress tolerance in maize
    Muhammad Atif Azeem, Fawad Ali, Abid Ullah, Mahmood Iqbal, Kishwar Ali, Dunia A. Al Farraj, Mohamed S. Elshikh, Qirat Naz, Muhammad Farooq Hussain Munis, Hassan Javed Chaudhary
    Environmental Science and Pollution Research.2023; 30(31): 77499.     CrossRef
  • The Mechanisms of the Growth Promotion and Protective Effects of Endophytic PGP Bacteria in Wheat Plants Under the Impact of Drought (Review)
    O. V. Lastochkina, Ch. R. Allagulova
    Applied Biochemistry and Microbiology.2023; 59(1): 14.     CrossRef
  • Biochemical Characterization and Potential of Bacillus safensis Strain SCAL1 to Mitigate Heat Stress in Solanum lycopersicum L.
    Tehmeena Mukhtar, Fawad Ali, Mazhar Rafique, Javed Ali, Muhammad Siddique Afridi, Donald Smith, Shehzad Mehmood, Amna, Alfred Souleimanov, Ghulam Jellani, Tariq Sultan, Farooq Hussain Munis, Hassan Javed Chaudhary
    Journal of Plant Growth Regulation.2023; 42(1): 523.     CrossRef
  • Continuous cropping of cut chrysanthemum reduces rhizospheric soil bacterial community diversity and co-occurrence network complexity
    Jun Li, Xiaoyu Cheng, Guixin Chu, Baowei Hu, Rui Tao
    Applied Soil Ecology.2023; 185: 104801.     CrossRef
  • Sphingomonas sediminicola Is an Endosymbiotic Bacterium Able to Induce the Formation of Root Nodules in Pea (Pisum sativum L.) and to Enhance Plant Biomass Production
    Candice Mazoyon, Bertrand Hirel, Audrey Pecourt, Manuella Catterou, Laurent Gutierrez, Vivien Sarazin, Fréderic Dubois, Jérôme Duclercq
    Microorganisms.2023; 11(1): 199.     CrossRef
  • Bioprospeksi Bakteri Asal Akar Nanas (Ananas comosus L. Merr) Lahan Gambut Kayu Agung, Sumatra Selatan, sebagai Agen Biostimulan dan Bioprotektan
    Erma Suryanti, Dewi Chusniasih, Muhammad Asril, Ika Agus Rini , Wulandari Putri Antika, Nadia Rahmah
    Jurnal Ilmu Pertanian Indonesia.2023; 28(3): 352.     CrossRef
  • Enhancement of humic acid on plant growth in a Cd-contaminated matrix: performance, kinetics, and mechanism
    Yan Zhao, Yang Shi, Zhi Wang, Guangsheng Qian
    Environmental Science and Pollution Research.2023; 30(3): 5677.     CrossRef
  • Optimizing Crop Production with Bacterial Inputs: Insights into Chemical Dialogue between Sphingomonas sediminicola and Pisum sativum
    Candice Mazoyon, Stéphane Firmin, Lamine Bensaddek, Audrey Pecourt, Amélie Chabot, Michel-Pierre Faucon, Vivien Sarazin, Fréderic Dubois, Jérôme Duclercq
    Microorganisms.2023; 11(7): 1847.     CrossRef
  • Mechanisms of Growth Promotional and Protective Effects of Endophytic PGP-Bacteria in Wheat Plants Under the Impact of Drought (Review)
    О. V. Lastochkina, Ch. R. Allagulova
    Прикладная биохимия и микробиология.2023; 59(1): 17.     CrossRef
  • Seed Bio-priming of wheat with a novel bacterial strain to modulate drought stress in Daegu, South Korea
    Shifa Shaffique, Muhammad Imran, Sang-Mo Kang, Muhammad Aaqil Khan, Sajjad Asaf, Won-Chan Kim, In-Jung Lee
    Frontiers in Plant Science.2023;[Epub]     CrossRef
  • Sphingomonas sediminicola Dae20 Is a Highly Promising Beneficial Bacteria for Crop Biostimulation Due to Its Positive Effects on Plant Growth and Development
    Candice Mazoyon, Manuella Catterou, Abdelrahman Alahmad, Gaëlle Mongelard, Stéphanie Guénin, Vivien Sarazin, Fréderic Dubois, Jérôme Duclercq
    Microorganisms.2023; 11(8): 2061.     CrossRef
  • Unraveling the functional genes present in rhizosphere microbiomes of Solanum lycopersicum
    Afeez Adesina Adedayo, Ayomide Emmanuel Fadiji, Olubukola Oluranti Babalola
    PeerJ.2023; 11: e15432.     CrossRef
  • Temporal dynamics of endophytic bacterial and fungal communities during spike development in Piper longum L.
    Sushma Mishra, Shilpi Sharma
    Physiology and Molecular Biology of Plants.2023; 29(8): 1117.     CrossRef
  • Complete genome of Sphingomonas paucimobilis ZJSH1, an endophytic bacterium from Dendrobium officinale with stress resistance and growth promotion potential
    Jin Li, Hangtao Wu, Qian Pu, Chu Zhang, Ying Chen, Zhengxin Lin, Xiufang Hu, Ou Li
    Archives of Microbiology.2023;[Epub]     CrossRef
  • Plant-microbiome interactions under drought—insights from the molecular machinist’s toolbox
    Mohamed Ait-El-Mokhtar, Abdelilah Meddich, Marouane Baslam
    Frontiers in Sustainable Food Systems.2023;[Epub]     CrossRef
  • New Sulfur-Containing Diketopiperazine from Marine-Derived Bacteria Streptomyces rochei sp. 81 with Potent Carbonic Anhydrase II Inhibition
    Ahmed N. Al-Rawahi, Raeid M. M. Abed, Najeeb Ur Rehman, Kashif Rafiq, Ajmal Khan, Abdul L. Khan, Majid Khan, Sobia Ahsan Halim, Fahad Al-Senafi, Huda Mahmoud, Ahmed Al-Harrasi
    Chemistry of Natural Compounds.2023; 59(2): 346.     CrossRef
  • Root microbiome diversity and structure of the Sonoran desert buffelgrass (Pennisetum ciliare L.)
    Angélica Jara-Servin, Adán Silva, Hugo Barajas, Rocío Cruz-Ortega, Clara Tinoco-Ojanguren, Luis D. Alcaraz, Marcela Pagano
    PLOS ONE.2023; 18(5): e0285978.     CrossRef
  • Cooperation of arbuscular mycorrhizal fungi and bacteria to facilitate the host plant growth dependent on soil pH
    Zengwei Feng, Xiaodi Liu, Yongqiang Qin, Guangda Feng, Yang Zhou, Honghui Zhu, Qing Yao
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Exopolysaccharide-producing bacteria enhanced Pb immobilization and influenced the microbiome composition in rhizosphere soil of pakchoi (Brassica chinensis L.)
    Ruiwen Cao, Yiling Zhang, Yuhao Ju, Wei Wang, Yanqiu Zhao, Nan Liu, Gangrui Zhang, Xingbao Wang, Xuesong Xie, Cunxi Dai, Yue Liu, Hongfei Yin, Kaiyuan Shi, Chenchen He, Weiyan Wang, Lingyu Zhao, Che Ok Jeon, Lujiang Hao
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Sphingomonas liriopis sp. nov., Sphingomonas donggukensis sp. nov., and Sphingomonas tagetis sp. nov., isolated from Liriope platyphylla fruit, soil, and Tagetes patula roots
    Inhyup Kim, Geeta Chhetri, Yoonseop So, Yonghee Jung, Sunho Park, Taegun Seo
    Archives of Microbiology.2023;[Epub]     CrossRef
  • The rootstock shape microbial diversity and functionality in the rhizosphere of Vitis vinifera L. cultivar Falanghina
    Daniela Zuzolo, Maria Antonietta Ranauda, Maria Maisto, Maria Tartaglia, Antonello Prigioniero, Alessandra Falzarano, Giuseppe Marotta, Rosaria Sciarrillo, Carmine Guarino
    Frontiers in Plant Science.2023;[Epub]     CrossRef
  • The phytomicrobiome: solving plant stress tolerance under climate change
    Abdul Latif Khan
    Frontiers in Plant Science.2023;[Epub]     CrossRef
  • Cadmium toxicity impacts plant growth and plant remediation strategies
    Mehtab Muhammad Aslam, Eyalira Jacob Okal, Muhammad Waseem
    Plant Growth Regulation.2023; 99(3): 397.     CrossRef
  • Short-term responses of plant growth-promoting bacterial community to the herbicides imazethapyr and flumioxazin
    Ademir Sergio Ferreira Araujo, Mariane Pertile, Romário Martins Costa, Mayanna Karlla Lima Costa, Rhaiana Oliveira de Aviz, Lucas William Mendes, Erika Valente de Medeiros, Diogo Paes da Costa, Vania Maria Maciel Melo, Arthur Prudencio de Araujo Pereira
    Chemosphere.2023; 328: 138581.     CrossRef
  • A nostoxanthin-producing bacterium, Sphingomonas nostoxanthinifaciens sp. nov., alleviates the salt stress of Arabidopsis seedlings by scavenging of reactive oxygen species
    Lingmin Jiang, Jiyoon Seo, Yuxin Peng, Doeun Jeon, Ju Huck Lee, Cha Young Kim, Jiyoung Lee
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Microbiome analysis revealed distinct microbial communities occupying different sized nodules in field-grown peanut
    Md Shakhawat Hossain, Paul B. DeLaune, Terry J. Gentry
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Developmental Phytohormones: Key Players in Host-Microbe Interactions
    Rupali Gupta, Gautam Anand, Maya Bar
    Journal of Plant Growth Regulation.2023; 42(12): 7330.     CrossRef
  • Pesticide-tolerant microbial consortia: Potential candidates for remediation/clean-up of pesticide-contaminated agricultural soil
    Mohammad Shahid, Mohammad Saghir Khan, Udai B. Singh
    Environmental Research.2023; 236: 116724.     CrossRef
  • Response of microbial communities in the phyllosphere ecosystem of tobacco exposed to the broad-spectrum copper hydroxide
    Ruichao Feng, Hancheng Wang, Tingting Liu, Feng Wang, Liuti Cai, Xingjiang Chen, Songbai Zhang
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Problems and prospects of utilization of bacterial endophytes for the management of plant diseases
    Dhruva Kumar Jha
    Indian Phytopathology.2023; 76(1): 3.     CrossRef
  • Phage combination alleviates bacterial leaf blight of rice (Oryza sativa L.)
    Hubiao Jiang, Changxin Li, Xuefang Huang, Temoor Ahmed, Solabomi Olaitan Ogunyemi, Shanhong Yu, Xiao Wang, Hayssam M. Ali, Fahad Khan, Chengqi Yan, Jianping Chen, Bin Li
    Frontiers in Plant Science.2023;[Epub]     CrossRef
  • Role of microbial inoculants as bio fertilizers for improving crop productivity: A review
    Durre Shahwar, Zeenat Mushtaq, Humira Mushtaq, Abdulaziz A. Alqarawi, Younghoon Park, Thobayet S. Alshahrani, Shahla Faizan
    Heliyon.2023; 9(6): e16134.     CrossRef
  • Metabarcoding reveals response of rice rhizosphere bacterial community to rice bacterial leaf blight
    Hubiao Jiang, Xinyan Xu, Yuan Fang, Solabomi Olaitan Ogunyemi, Temoor Ahmed, Xuqing Li, Yong Yang, Chengqi Yan, Jianping Chen, Bin Li
    Microbiological Research.2023; 270: 127344.     CrossRef
  • Pheno- and Genotyping of Three Novel Bacteriophage Genera That Target a Wheat Phyllosphere Sphingomonas Genus
    Leise Riber, Alexander Byth Carstens, Peter Erdmann Dougherty, Chayan Roy, Katharina Willenbücher, Frank Hille, Charles M. A. P. Franz, Lars Hestbjerg Hansen
    Microorganisms.2023; 11(7): 1831.     CrossRef
  • Screening of plant growth-promoting attributes bearing endogenous bacteria from abiotic stress resisting high altitude plants
    Manpreet Kaur, Arun Karnwal
    Journal of Agriculture and Food Research.2023; 11: 100489.     CrossRef
  • Phylogeny, phenotypic characteristics and pathogenicity of Sphingomonas sp. and Erwinia persicina as bacterial causal agents of lettuce diseases in southwest of Iran
    Vahid Keshavarz-Tohid, Somayeh Ebrahimi
    Physiological and Molecular Plant Pathology.2023; 127: 102124.     CrossRef
  • Tug of War-Who is the Winner? Canker Disease Restructures the Endophytic Bacterial Community of Citrus
    Jian-Yu Zhou, Yi Zhang, Wen-Ping Xu, Misbah Naz, Xiao-Meng Li, Xu Li, Bi-Ying Zhao, Shan-Shan Qi, Zhi-Cong Dai, Dao-Lin Du
    Horticultural Science and Technology.2023; 41(5): 605.     CrossRef
  • Physiological Effects of Microbial Biocontrol Agents in the Maize Phyllosphere
    María Fiamma Grossi Vanacore, Melina Sartori, Francisco Giordanino, Germán Barros, Andrea Nesci, Daiana García
    Plants.2023; 12(24): 4082.     CrossRef
  • Towards further understanding the applications of endophytes: enriched source of bioactive compounds and bio factories for nanoparticles
    Nisha Choudhary, Naveen Dhingra, Amel Gacem, Virendra Kumar Yadav, Rakesh Kumar Verma, Mahima Choudhary, Uma Bhardwaj, Rajendra Singh Chundawat, Mohammed S. Alqahtani, Rajarshi Kumar Gaur, Lienda Bashier Eltayeb, Waleed Al Abdulmonem, Byong-Hun Jeon
    Frontiers in Plant Science.2023;[Epub]     CrossRef
  • Phytoextraction of As by Pteris vittata L. assisted with municipal sewage sludge compost and associated mechanism
    Guanghui Guo, Degang Zhang, Mei Lei, Xiaoming Wan, Jun Yang, Heng Wei, Shiqi Chen
    Science of The Total Environment.2023; 893: 164705.     CrossRef
  • Novel Approaches for Sustainable Horticultural Crop Production: Advances and Prospects
    Oksana Lastochkina, Sasan Aliniaeifard, Maryam SeifiKalhor, Massimo Bosacchi, Dilara Maslennikova, Alsu Lubyanova
    Horticulturae.2022; 8(10): 910.     CrossRef
  • Endophytes and their potential in biotic stress management and crop production
    Parul Chaudhary, Upasana Agri, Anuj Chaudhary, Ashish Kumar, Govind Kumar
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Acidic amelioration of soil amendments improves soil health by impacting rhizosphere microbial assemblies
    Dele Chen, Xingxiang Wang, Víctor J. Carrión, Shan Yin, Zhengfu Yue, Yangwenke Liao, Yuanhua Dong, Xiaogang Li
    Soil Biology and Biochemistry.2022; 167: 108599.     CrossRef
  • Mangrove’s rhizospheric engineering with bacterial inoculation improve degradation of diesel contamination
    Abdul Latif Khan, Muhammad Numan, Saqib Bilal, Sajjad Asaf, Kerri Crafword, Muhammad Imran, Ahmed Al-Harrasi, Jamal Nasser Al-Sabahi, Najeeb ur Rehman, Ahmed A-Rawahi, In-Jung Lee
    Journal of Hazardous Materials.2022; 423: 127046.     CrossRef
  • Microbial fuel cell as water-energy-environment nexus: a relevant strategy for treating streamlined effluents
    Nikita Mittal, Ajay Kumar
    Energy Nexus.2022; 7: 100097.     CrossRef
  • Sphingomonas folii sp. nov., Sphingomonas citri sp. nov. and Sphingomonas citricola sp. nov., isolated from citrus phyllosphere
    Guang-Da Feng, Jiali Li, Mingkai Pan, Xiaoqin Deng, Meng Chen, Qing Yao, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Heavy metal transporters: Functional mechanisms, regulation, and application in phytoremediation
    Zi Yang, Fan Yang, Jia-Lan Liu, Hai-Tao Wu, Hao Yang, Yi Shi, Jie Liu, Yan-Feng Zhang, Yan-Rong Luo, Kun-Ming Chen
    Science of The Total Environment.2022; 809: 151099.     CrossRef
  • The Deterioration of Agronomical Traits of the Continuous Cropping of Stevia Is Associated With the Dynamics of Soil Bacterial Community
    Xinjuan Xu, Qingyun Luo, Qichao Wei, Shangtao Jiang, Caixia Dong, Mohammad Omar Faruque, Zhongwen Huang, Zhenghua Xu, Changxi Yin, Zaibiao Zhu, Xuebo Hu
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Effects of long-term application of organic manure and chemical fertilizer on soil properties and microbial communities in the agro-pastoral ecotone of North China
    Riping Gao, Yu Duan, Jun Zhang, Yongfeng Ren, Huanchun Li, Xiaoyue Liu, Peiyi Zhao, Yupeng Jing
    Frontiers in Environmental Science.2022;[Epub]     CrossRef
  • Root and Rhizosphere Microbiome of Tomato Plants Grown in the Open Field in the South of West Siberia under Mineral Fertilization
    Natalia Naumova, Olga Baturina, Taisia Nechaeva, Marsel Kabilov
    Horticulturae.2022; 8(11): 1051.     CrossRef
  • Inoculations of soil by antagonistic strains modify tuberosphere bacterial communities and suppress common scab of potatoes
    Tereza Patrmanova, Iva Krizkova, Daria Rapoport, Jan Kopecky, Sarka Hrychova, Marketa Sagova-Mareckova
    Applied Soil Ecology.2022; 176: 104491.     CrossRef
  • Contrasting patterns of microbial dominance in the Arabidopsis thaliana phyllosphere
    Derek S. Lundberg, Roger de Pedro Jové, Pratchaya Pramoj Na Ayutthaya, Talia L. Karasov, Or Shalev, Karin Poersch, Wei Ding, Anita Bollmann-Giolai, Ilja Bezrukov, Detlef Weigel
    Proceedings of the National Academy of Sciences.2022;[Epub]     CrossRef
  • Metagenomic analysis of the dynamical conversion of photosynthetic bacterial communities in different crop fields over different growth periods
    Ju-E Cheng, Pin Su, Zhan-Hong Zhang, Li-Min Zheng, Zhong-Yong Wang, Muhammad Rizwan Hamid, Jian-Ping Dai, Xiao-Hua Du, Li-Jie Chen, Zhong-Ying Zhai, Xiao-Ting Kong, Yong Liu, De-Yong Zhang, Suzanne L. Ishaq
    PLOS ONE.2022; 17(7): e0262517.     CrossRef
  • Volatile organic compounds from Lysinibacillus macroides regulating the seedling growth of Arabidopsis thaliana
    Dongying Zhao, Junhui Jiao, Binghai Du, Kai Liu, Chengqiang Wang, Yanqin Ding
    Physiology and Molecular Biology of Plants.2022; 28(11-12): 1997.     CrossRef
  • Unraveling global and diazotrophic bacteriomes of boreal forest floor feather mosses and their environmental drivers at the ecosystem and at the plant scale in North America
    Marie Renaudin, Isabelle Laforest-Lapointe, Jean-Philippe Bellenger
    Science of The Total Environment.2022; 837: 155761.     CrossRef
  • Synergistic effects of Azospirillum brasilense and Bacillus cereus on plant growth, biochemical attributes and molecular genetic regulation of steviol glycosides biosynthetic genes in Stevia rebaudiana
    Ashraf Elsayed, Amal M. Abdelsattar, Yasmin M. Heikal, Mohamed A. El-Esawi
    Plant Physiology and Biochemistry.2022; 189: 24.     CrossRef
  • Cultivation of Two Barnyard Varieties Improves Physicochemical Properties of Saline-Alkali Land through Mediating Rhizospheric Microbiome and Metabolome
    Xueqin Wang, Xing Xu, Anqiao Lu, Xin Li, Fengju Zhang
    Agronomy.2022; 12(6): 1322.     CrossRef
  • Characterization of the Cultivable Endophytic Bacterial Community of Seeds and Sprouts of Cannabis sativa L. and Perspectives for the Application as Biostimulants
    Morena Gabriele, Francesco Vitali, Elisa Chelucci, Carolina Chiellini
    Microorganisms.2022; 10(9): 1742.     CrossRef
  • Genomic Characterization of Potential Plant Growth-Promoting Features of Sphingomonas Strains Isolated from the International Space Station
    Jonathan Lombardino, Swati Bijlani, Nitin K. Singh, Jason M. Wood, Richard Barker, Simon Gilroy, Clay C. C. Wang, Kasthuri Venkateswaran, Kim M. Handley
    Microbiology Spectrum.2022;[Epub]     CrossRef
  • The role of plant-associated rhizobacteria in plant growth, biocontrol and abiotic stress management
    Basharat Ahmad Bhat, Lubna Tariq, Showkat Nissar, Sheikh Tajamul Islam, Shahid Ul Islam, Zahid Mangral, Noshin Ilyas, Riyaz Z. Sayyed, Govarthanan Muthusamy, Woong Kim, Tanvir Ul Hasan Dar
    Journal of Applied Microbiology.2022; 133(5): 2717.     CrossRef
  • Sphingomonas sp. Hbc-6 alters physiological metabolism and recruits beneficial rhizosphere bacteria to improve plant growth and drought tolerance
    Fang Wang, Yali Wei, Taozhe Yan, Cuicui Wang, Yinghui Chao, Mingyue Jia, Lizhe An, Hongmei Sheng
    Frontiers in Plant Science.2022;[Epub]     CrossRef
  • Diversity, Antimicrobial Activity, and Antibiotic Susceptibility Pattern of Endophytic Bacteria Sourced From Cordia dichotoma L
    Mahima Sharma, Sharada Mallubhotla
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Responses of Rhizosphere Soil Chemical Properties and Bacterial Community Structure to Major Afforestation Tree Species in Xiong’an New Area
    Kefan Wang, Zhenlu Qiu, Mei Zhang, Xueying Li, Xin Fang, Mingyuan Zhao, Fuchen Shi
    Forests.2022; 13(11): 1822.     CrossRef
  • Valorization of African indigenous leafy vegetables: The role of phyllosphere microbiota
    Chiara Misci, Eren Taskin, Filippo Vaccari, Margherita Dall'Asta, Samuel Imathiu, Pier Sandro Cocconcelli, Edoardo Puglisi
    Food Research International.2022; 162: 111944.     CrossRef
  • Effect of Stevia rebaudiana Bertoni residue on the arsenic phytoextraction efficiency of Pteris vittata L
    Yingying Lu, Shuijiao Liao, Yiran Ding, Ying He, Ziyi Gao, Danna Song, Wei Tian, Xing Zhang
    Journal of Hazardous Materials.2022; 421: 126678.     CrossRef
  • Is Endophytic Colonization of Host Plants a Method of Alleviating Drought Stress? Conceptualizing the Hidden World of Endophytes
    Roopashree Byregowda, Siddegowda Rajendra Prasad, Ralf Oelmüller, Karaba N. Nataraja, M. K. Prasanna Kumar
    International Journal of Molecular Sciences.2022; 23(16): 9194.     CrossRef
  • Assembly of rhizosphere microbial communities in Artemisia annua: recruitment of plant growth‐promoting microorganisms and inter‐kingdom interactions between bacteria and fungi
    Yuhua Shi, Yanshuo Pan, Li Xiang, Zhihui Zhu, Wenbo Fu, Guangfei Hao, Zengchao Geng, Shilin Chen, Yuzhong Li, Dongfei Han
    Plant and Soil.2022; 470(1-2): 127.     CrossRef
  • Dynamic Alteration of Microbial Communities of Duckweeds from Nature to Nutrient-Deficient Condition
    Chakrit Bunyoo, Peerapat Roongsattham, Sirikorn Khumwan, Juthaporn Phonmakham, Passorn Wonnapinij, Arinthip Thamchaipenet
    Plants.2022; 11(21): 2915.     CrossRef
  • Bacillus mojavensis, a Metal-Tolerant Plant Growth-Promoting Bacterium, Improves Growth, Photosynthetic Attributes, Gas Exchange Parameters, and Alkalo-Polyphenol Contents in Silver Nanoparticle (Ag-NP)-Treated Withania somnifera L. (Ashwagandha)
    Mohammad Danish, Mohammad Shahid, Mohammad Tarique Zeyad, Najat A. Bukhari, Fatimah S. Al-Khattaf, Ashraf Atef Hatamleh, Sajad Ali
    ACS Omega.2022; 7(16): 13878.     CrossRef
  • Endophytic bacteria of wheat and the potential to improve microelement composition of grain
    O. O. Makar, N. D. Romanyuk
    Studia Biologica.2022; 16(3): 101.     CrossRef
  • Soil carbon supplementation: Improvement of root-surrounding soil bacterial communities, sugar and starch content in tobacco (N. tabacum)
    Shen Yan, Tianbao Ren, Wan Adibah Wan Mahari, Huilin Feng, Chensheng Xu, Fei Yun, Khor Waiho, Yaowei Wei, Su Shiung Lam, Guoshun Liu
    Science of The Total Environment.2022; 802: 149835.     CrossRef
  • Endophytic bacteria from the leaves of two types of albino tea plants, indicating the plant growth promoting properties
    Huiyan Jia, Zuguo Xi, Jinqing Ma, Yifan Li, Changhong Hao, Mengqian Lu, Zheng-Zhu Zhang, Wei-Wei Deng
    Plant Growth Regulation.2022; 96(2): 331.     CrossRef
  • Unsnarling Plausible Role of Plant Growth-Promoting Rhizobacteria for Mitigating Cd-Toxicity from Plants: An Environmental Safety Aspect
    Kanika Khanna, Puja Ohri, Renu Bhardwaj, Parvaiz Ahmad
    Journal of Plant Growth Regulation.2022; 41(6): 2514.     CrossRef
  • Tobacco straw biochar improved the growth of Chinese cherry (Prunus pseudocerasus) via altering plant physiology and shifting the rhizosphere bacterial community
    Kun Yang, Yuwen Jiang, Jianning Wang, Xiaowei Cai, Zhuang Wen, Zhilang Qiu, Guang Qiao
    Scientia Horticulturae.2022; 303: 111244.     CrossRef
  • Differences of rhizospheric and endophytic bacteria are recruited by different watermelon phenotypes relating to rind colors formation
    Jian Xiao, Si-yu Chen, Yan Sun, Shang-dong Yang, Yi He
    Scientific Reports.2022;[Epub]     CrossRef
  • Deciphering the plant microbiome to improve drought tolerance: Mechanisms and perspectives
    Sajad Ali, Anshika Tyagi, Suvin Park, Rakeeb A. Mir, Muntazir Mushtaq, Basharat Bhat, Henda Mahmoudi, Hanhong Bae
    Environmental and Experimental Botany.2022; 201: 104933.     CrossRef
  • Volatile Organic Compounds of Streptomyces sp. TOR3209 Stimulated Tobacco Growth by Up-Regulating the Expression of Genes Related to Plant Growth and Development
    Yuxi He, Wenyu Guo, Jieli Peng, Jinying Guo, Jia Ma, Xu Wang, Cuimian Zhang, Nan Jia, Entao Wang, Dong Hu, Zhanwu Wang
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Sphingomonas psychrotolerans sp. nov., isolated from root surface of Leontopodium leontopodioides in the Tianshan Mountains, Xinjiang, China
    Yang Luo, Meng Zhou, Fang Wang, Hongmei Sheng
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Triterpenoid and Steroidal Saponins Differentially Influence Soil Bacterial Genera
    Masaru Nakayasu, Shinichi Yamazaki, Yuichi Aoki, Kazufumi Yazaki, Akifumi Sugiyama
    Plants.2021; 10(10): 2189.     CrossRef
  • Bacterial Endophytes of Spring Wheat Grains and the Potential to Acquire Fe, Cu, and Zn under Their Low Soil Bioavailability
    Orysia Makar, Agnieszka Kuźniar, Ostap Patsula, Yana Kavulych, Volodymyr Kozlovskyy, Agnieszka Wolińska, Ewa Skórzyńska-Polit, Olena Vatamaniuk, Olga Terek, Nataliya Romanyuk
    Biology.2021; 10(5): 409.     CrossRef
  • On the genetic architecture in a public tropical maize panel of the symbiosis between corn and plant growth-promoting bacteria aiming to improve plant resilience
    Rafael Massahiro Yassue, Humberto Fanelli Carvalho, Raysa Gevartosky, Felipe Sabadin, Pedro Henrique Souza, Maria Leticia Bonatelli, João Lúcio Azevedo, Maria Carolina Quecine, Roberto Fritsche-Neto
    Molecular Breeding.2021;[Epub]     CrossRef
  • Tomato roots secrete tomatine to modulate the bacterial assemblage of the rhizosphere
    Masaru Nakayasu, Kohei Ohno, Kyoko Takamatsu, Yuichi Aoki, Shinichi Yamazaki, Hisabumi Takase, Tsubasa Shoji, Kazufumi Yazaki, Akifumi Sugiyama
    Plant Physiology.2021; 186(1): 270.     CrossRef
  • Bioprospecting Desert Plants for Endophytic and Biostimulant Microbes: A Strategy for Enhancing Agricultural Production in a Hotter, Drier Future
    Qiuwei Zhang, James F. White
    Biology.2021; 10(10): 961.     CrossRef
  • Orchid Root Associated Bacteria: Linchpins or Accessories?
    Jaspreet Kaur, Jyotsna Sharma
    Frontiers in Plant Science.2021;[Epub]     CrossRef
  • Bacterial inoculation positively affects the quality and quantity of flax under deficit irrigation regimes
    S. Rajabi‐Khamseh, A. Danesh Shahraki, M. Rafieiolhossaini, K. Saeidi
    Journal of Applied Microbiology.2021; 131(1): 321.     CrossRef
  • Microbial Interactions and Roles in Soil Fertility in Seasonal Freeze-Thaw Periods under Different Straw Returning Strategies
    Mengqi Sun, Baoyu Chen, Hongjun Wang, Nan Wang, Taigang Ma, Yingshun Cui, Tianhao Luan, Seongjun Chun, Chunguang Liu, Lichun Wang
    Agriculture.2021; 11(8): 779.     CrossRef
  • The Endophytic Microbiome as a Hotspot of Synergistic Interactions, with Prospects of Plant Growth Promotion
    Udaya Kumar Vandana, Jina Rajkumari, L. Paikhomba Singha, Lakkakula Satish, Hemasundar Alavilli, Pamidimarri D.V.N. Sudheer, Sushma Chauhan, Rambabu Ratnala, Vanisri Satturu, Pranab Behari Mazumder, Piyush Pandey
    Biology.2021; 10(2): 101.     CrossRef
  • Comparative analysis of bacterial and fungal endophytes responses to Candidatus Liberibacter asiaticus infection in leaf midribs of Citrus reticulata cv. Shatangju
    Huaxue Yan, Birong Zhou, Bo Jiang, Yuanda Lv, M.D. Moniruzzaman, Guangyan Zhong, Yun Zhong
    Physiological and Molecular Plant Pathology.2021; 113: 101590.     CrossRef
  • Niche specificity and functional diversity of the bacterial communities associated with Ginkgo biloba and Panax quinquefolius
    Hanan R. Shehata, Subramanyam Ragupathy, Thomas A. Henry, Steven G. Newmaster
    Scientific Reports.2021;[Epub]     CrossRef
  • Plant Growth-Promoting Endophytic Bacterial Community Inhabiting the Leaves of Pulicaria incisa (Lam.) DC Inherent to Arid Regions
    Amr Fouda, Ahmed M. Eid, Albaraa Elsaied, Ehab F. El-Belely, Mohammed G. Barghoth, Ehab Azab, Adil A. Gobouri, Saad El-Din Hassan
    Plants.2021; 10(1): 76.     CrossRef
  • Applications of endophytic microbes in agriculture, biotechnology, medicine, and beyond
    Sravanthi Goud Burragoni, Junhyun Jeon
    Microbiological Research.2021; 245: 126691.     CrossRef
  • Endophytic bacteria from Piper colubrinum suppress Phytophthora capsici infection in black pepper (Piper nigrum L.) and improve plant growth in the nursery
    Nadiya Kollakkodan, K. N. Anith, N. S. Nysanth
    Archives of Phytopathology and Plant Protection.2021; 54(1-2): 86.     CrossRef
  • Mechanisms of Action of Microbial Biocontrol Agents against Botrytis cinerea
    Rocío Roca-Couso, José David Flores-Félix, Raúl Rivas
    Journal of Fungi.2021; 7(12): 1045.     CrossRef
  • Persistent microbiome members in the common bean rhizosphere: an integrated analysis of space, time, and plant genotype
    Nejc Stopnisek, Ashley Shade
    The ISME Journal.2021; 15(9): 2708.     CrossRef
  • Prospecting Endophytic Bacteria Endowed With Plant Growth Promoting Potential Isolated From Camellia sinensis
    Shabiha Nudrat Hazarika, Kangkon Saikia, Atlanta Borah, Debajit Thakur
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Horsenettle (Solanum carolinense) fruit bacterial communities are not variable across fine spatial scales
    Ariel R. Heminger, Lisa K. Belden, Jacob N. Barney, Brian D. Badgley, David C. Haak
    PeerJ.2021; 9: e12359.     CrossRef
  • Virus diversity in metagenomes of a lichen symbiosis (Umbilicaria phaea): complete viral genomes, putative hosts and elevational distributions
    Dominik Merges, Francesco Dal Grande, Carola Greve, Jürgen Otte, Imke Schmitt
    Environmental Microbiology.2021; 23(11): 6637.     CrossRef
  • Does Organic Farming Increase Raspberry Quality, Aroma and Beneficial Bacterial Biodiversity?
    Daniela Sangiorgio, Antonio Cellini, Francesco Spinelli, Brian Farneti, Iuliia Khomenko, Enrico Muzzi, Stefano Savioli, Chiara Pastore, María Teresa Rodriguez-Estrada, Irene Donati
    Microorganisms.2021; 9(8): 1617.     CrossRef
  • Shotgun metagenomics reveals the functional diversity of root-associated endophytic microbiomes in maize plant
    Ayomide Emmanuel Fadiji, Ayansina Segun Ayangbenro, Olubukola Oluranti Babalola
    Current Plant Biology.2021; 25: 100195.     CrossRef
  • Evaluation of applying an alkaline green tea/ferrous iron system to lindane remediation impacts to soil and plant growth-promoting microbial community
    Siang Chen Wu, Chun-Chen Lu
    Science of The Total Environment.2021; 786: 147511.     CrossRef
  • Drought Tolerance Strategies in Plants: A Mechanistic Approach
    Muhammad Ilyas, Mohammad Nisar, Nadeem Khan, Ali Hazrat, Aamir Hamid Khan, Kashif Hayat, Shah Fahad, Aziz Khan, Abid Ullah
    Journal of Plant Growth Regulation.2021; 40(3): 926.     CrossRef
  • Role of biochar, compost and plant growth promoting rhizobacteria in the management of tomato early blight disease
    Mujahid Rasool, Adnan Akhter, Gerhard Soja, Muhammad Saleem Haider
    Scientific Reports.2021;[Epub]     CrossRef
  • General Limitations to Endophytic Entomopathogenic Fungi Use as Plant Growth Promoters, Pests and Pathogens Biocontrol Agents
    Bamisope Steve Bamisile, Junaid Ali Siddiqui, Komivi Senyo Akutse, Luis Carlos Ramos Aguila, Yijuan Xu
    Plants.2021; 10(10): 2119.     CrossRef
  • Single and combined abiotic stressors affect maize rhizosphere bacterial microbiota
    Rosa Vescio, Antonino Malacrinò, Alison E. Bennett, Agostino Sorgonà
    Rhizosphere.2021; 17: 100318.     CrossRef
  • Model Application of Entomopathogenic Fungi as Alternatives to Chemical Pesticides: Prospects, Challenges, and Insights for Next-Generation Sustainable Agriculture
    Bamisope Steve Bamisile, Komivi Senyo Akutse, Junaid Ali Siddiqui, Yijuan Xu
    Frontiers in Plant Science.2021;[Epub]     CrossRef
  • Bacterial Endophytes as a Promising Approach to Enhance the Growth and Accumulation of Bioactive Metabolites of Three Species of Chenopodium Sprouts
    Mohammed S. Almuhayawi, Mohamed Abdel-Mawgoud, Soad K. Al Jaouni, Saad M. Almuhayawi, Mohammed H. Alruhaili, Samy Selim, Hamada AbdElgawad
    Plants.2021; 10(12): 2745.     CrossRef
  • Insight into the Influencing Mechanism of Endophytic Bacteria on the Adsorption of Heavy Metals by Plants: A Review
    Chiyue Huang, Zhaohui Guo, Pufeng Qin
    Science of Advanced Materials.2021; 13(8): 1401.     CrossRef
  • Dissection of physiological, transcriptional, and metabolic traits in two tall fescue genotypes with contrasting drought tolerance
    Yun Kang, Shyamal Talukder, Zewei An, Ivone Torres‐Jerez, Nick Krom, David Huhman, Michael Udvardi, Malay C. Saha
    Plant-Environment Interactions.2021; 2(6): 277.     CrossRef
  • Plant growth–promoting traits of yeasts isolated from the tank bromeliad Vriesea minarum L.B. Smith and the effectiveness of Carlosrosaea vrieseae for promoting bromeliad growth
    Andréa R. Marques, Alessandra A. Resende, Fátima C. O. Gomes, Ana Raquel O. Santos, Carlos A. Rosa, Alexandre A. Duarte, José Pires de Lemos-Filho, Vera Lúcia dos Santos
    Brazilian Journal of Microbiology.2021; 52(3): 1417.     CrossRef
  • Effectively controlling Fusarium root rot disease of Angelica sinensis and enhancing soil fertility with a novel attapulgite-coated biocontrol agent
    Yang Liu, Yuan Tian, Liang Yue, Uwaremwe Constantine, Xia Zhao, Qin Zhou, Yun Wang, Yubao Zhang, Gaofeng Chen, Zhiheng Dun, Zengtuan Cui, Ruoyu Wang
    Applied Soil Ecology.2021; 168: 104121.     CrossRef
  • Use of Acyl-Homoserine Lactones Leads to Improved Growth of Ginseng Seedlings and Shifts in Soil Microbiome Structure
    Jerald-Conrad Ibal, Min-Kyu Park, Gun-Seok Park, Byung-Kwon Jung, Tae-Hyung Park, Min-Sueng Kim, Gi-Ung Kang, Yeong-Jun Park, Jae-Ho Shin
    Agronomy.2021; 11(11): 2177.     CrossRef
  • Wheat Growth Dependent Succession of Culturable Endophytic Bacteria and Their Plant Growth Promoting Traits
    Janki K. Patel, Krupa Gohel, Hiral Patel, Tanvi Solanki
    Current Microbiology.2021; 78(12): 4103.     CrossRef
  • Endophytic bacteria associated with the enhanced cadmium resistance in NHX1- overexpressing tobacco plants
    Gang Wang, Dan Yang, Wuteng Wang, Jing Ji, Chao Jin, Chunfeng Guan
    Environmental and Experimental Botany.2021; 188: 104524.     CrossRef
  • Ancient Bacterial Class Alphaproteobacteria Cytochrome P450 Monooxygenases Can Be Found in Other Bacterial Species
    Nomfundo Nzuza, Tiara Padayachee, Puleng Rosinah Syed, Justyna Dorota Kryś, Wanping Chen, Dominik Gront, David R. Nelson, Khajamohiddin Syed
    International Journal of Molecular Sciences.2021; 22(11): 5542.     CrossRef
  • Effect of Bacillus spp. and Brevibacillus sp. on the Photosynthesis and Redox Status of Solanum lycopersicum
    Marino Costa-Santos, Nuno Mariz-Ponte, Maria Dias, Luísa Moura, Guilhermina Marques, Conceição Santos
    Horticulturae.2021; 7(2): 24.     CrossRef
  • Comparative Study between Exogenously Applied Plant Growth Hormones versus Metabolites of Microbial Endophytes as Plant Growth-Promoting for Phaseolus vulgaris L.
    Mohamed A. Ismail, Mohamed A. Amin, Ahmed M. Eid, Saad El-Din Hassan, Hany A. M. Mahgoub, Islam Lashin, Abdelrhman T. Abdelwahab, Ehab Azab, Adil A. Gobouri, Amr Elkelish, Amr Fouda
    Cells.2021; 10(5): 1059.     CrossRef
  • Multi-Trait Wheat Rhizobacteria from Calcareous Soil with Biocontrol Activity Promote Plant Growth and Mitigate Salinity Stress
    Anastasia Venieraki, Styliani N. Chorianopoulou, Panagiotis Katinakis, Dimitris L. Bouranis
    Microorganisms.2021; 9(8): 1588.     CrossRef
  • Endophytes enhance Asia minor bluegrass (Polypogon fugax) resistance to quizalofop-p-ethyl
    Kailin Liu, Kun Luo, Aixing Mao, Lang Pan, Bei Yan, Jing Wu, Lifeng Hu, Min Liu, Xiangying Liu, Lianyang Bai
    Plant and Soil.2020; 450(1-2): 373.     CrossRef
  • Revealing the Impact of the Environment on Cistanche salsa: From Global Ecological Regionalization to Soil Microbial Community Characteristics
    Xiao Sun, Jin Pei, Yu-lin Lin, Bao-li Li, Li Zhang, Bashir Ahmad, Lin-Fang Huang
    Journal of Agricultural and Food Chemistry.2020; 68(32): 8720.     CrossRef
  • Seed Priming with Endophytic Bacillus subtilis Modulates Physiological Responses of Two Different Triticum aestivum L. Cultivars under Drought Stress
    Oksana Lastochkina, Darya Garshina, Sergey Ivanov, Ruslan Yuldashev, Regina Khafizova, Chulpan Allagulova, Kristina Fedorova, Azamat Avalbaev, Dilara Maslennikova, Massimo Bosacchi
    Plants.2020; 9(12): 1810.     CrossRef
  • Use of Plant Growth-Promoting Rhizobacteria in Maize and Sugarcane: Characteristics and Applications
    Roberta Mendes dos Santos, Paola Andrea Escobar Diaz, Laiana Lana Bentes Lobo, Everlon Cid Rigobelo
    Frontiers in Sustainable Food Systems.2020;[Epub]     CrossRef
  • Promotion of saltgrass growth in a saline petroleum hydrocarbons contaminated soil using a plant growth promoting bacterial consortium
    Mingqian Xia, Romy Chakraborty, Norman Terry, Rajendra Prasad Singh, Dafang Fu
    International Biodeterioration & Biodegradation.2020; 146: 104808.     CrossRef
  • The Dynamics of Endophytic Bacterial Community Structure in Rice Roots under Different Field Management Systems
    Guan-Ying Lin, Chia-Yu Lin, Su-Jein Chang, Wei-Yi Lin
    Agronomy.2020; 10(11): 1623.     CrossRef
  • Correlation between soil microbial communities and tobacco aroma in the presence of different fertilizers
    Shen Yan, Jiayuan Zhao, Tianbao Ren, Guoshun Liu
    Industrial Crops and Products.2020; 151: 112454.     CrossRef
  • A potential antifungal and growth-promoting bacterium Bacillus sp. KTMA4 from tomato rhizosphere
    S. Karthika, Sebastian Jose Midhun, M.S. Jisha
    Microbial Pathogenesis.2020; 142: 104049.     CrossRef
  • Role of plant growth-promoting bacteria in sustainable agriculture
    Priyanka Pathania, Ankita Rajta, Poonam C. Singh, Ranjana Bhatia
    Biocatalysis and Agricultural Biotechnology.2020; 30: 101842.     CrossRef
  • Plant growth‐promoting endophytic bacteria augment growth and salinity tolerance in rice plants
    M. A. Khan, S. Asaf, A. L. Khan, A. Adhikari, R. Jan, S. Ali, M. Imran, K.‐M. Kim, I.‐J. Lee, H. Papen
    Plant Biology.2020; 22(5): 850.     CrossRef
  • Early blight suppression and plant growth promotion potential of the endophyte Aspergillus flavus in tomato plant
    Fatma Abdel-Motaal, Noha Kamel, Soad El-Zayat, Mohamed Abou-Ellail
    Annals of Agricultural Sciences.2020; 65(2): 117.     CrossRef
  • Wheat dwarfing influences selection of the rhizosphere microbiome
    Vanessa N. Kavamura, Rebekah J. Robinson, David Hughes, Ian Clark, Maike Rossmann, Itamar Soares de Melo, Penny R. Hirsch, Rodrigo Mendes, Tim H. Mauchline
    Scientific Reports.2020;[Epub]     CrossRef
  • Two-year study of biochar: Achieving excellent capability of potassium supply via alter clay mineral composition and potassium-dissolving bacteria activity
    Mengyang Zhang, Muhammad Riaz, Bo Liu, Hao Xia, Zeinab El-desouki, Cuncang Jiang
    Science of The Total Environment.2020; 717: 137286.     CrossRef
  • Culture-Dependent and Culture-Independent Characterization of the Olive Xylem Microbiota: Effect of Sap Extraction Methods
    Manuel Anguita-Maeso, Concepción Olivares-García, Carmen Haro, Juan Imperial, Juan A. Navas-Cortés, Blanca B. Landa
    Frontiers in Plant Science.2020;[Epub]     CrossRef
  • Methylobacterium, a major component of the culturable bacterial endophyte community of wild Brassica seed
    Davood Roodi, James P. Millner, Craig McGill, Richard D. Johnson, Ruy Jauregui, Stuart D. Card
    PeerJ.2020; 8: e9514.     CrossRef
  • Corn microbial diversity and its relationship to yield
    Shimaila Ali, Soledad Saldias, Nimalka Weerasuriya, Kristen Delaney, Saveetha Kandasamy, George Lazarovits
    Canadian Journal of Microbiology.2020; 66(8): 457.     CrossRef
  • Treatments with native Coleus forskohlii endophytes improve fitness and secondary metabolite production of some medicinal and aromatic plants
    Anthati Mastan, Chikkarasanahalli Shivegowda Vivek Babu, Channayya Hiremath, Kalavagunta Venkata Naga Satya Srinivas, Arigari Niranjan Kumar, Jonnala Kotesh Kumar
    International Microbiology.2020; 23(2): 345.     CrossRef
  • Effects of Depolymerized Gellan with Different Molecular Weights on the Growth of Four Bedding Plant Species
    Piotr Salachna
    Agronomy.2020; 10(2): 169.     CrossRef
  • Role of Microorganisms in the Remediation of Wastewater in Floating Treatment Wetlands: A Review
    Munazzam Jawad Shahid, Ameena A. AL-surhanee, Fayza Kouadri, Shafaqat Ali, Neeha Nawaz, Muhammad Afzal, Muhammad Rizwan, Basharat Ali, Mona H. Soliman
    Sustainability.2020; 12(14): 5559.     CrossRef
  • Interkingdom signaling in plant-rhizomicrobiome interactions for sustainable agriculture
    Manisha Phour, Anju Sehrawat, Satyavir Singh Sindhu, Bernard R. Glick
    Microbiological Research.2020; 241: 126589.     CrossRef
  • Effect of the endophytic plant growth promoting Enterobacter ludwigii EB4B on tomato growth
    M.E.A. Bendaha, H.A. Belaouni
    Hellenic Plant Protection Journal.2020; 13(2): 54.     CrossRef
  • Biocontrol of Bacterial Wilt Disease Through Complex Interaction Between Tomato Plant, Antagonists, the Indigenous Rhizosphere Microbiota, and Ralstonia solanacearum
    Tarek R. Elsayed, Samuel Jacquiod, Eman H. Nour, Søren J. Sørensen, Kornelia Smalla
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Exploring the Microbiota of East African Indigenous Leafy Greens for Plant Growth, Health, and Resilience
    Julian Taffner, Olivia Laggner, Adrian Wolfgang, Danny Coyne, Gabriele Berg
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Elucidating Mechanisms of Endophytes Used in Plant Protection and Other Bioactivities With Multifunctional Prospects
    Ayomide Emmanuel Fadiji, Olubukola Oluranti Babalola
    Frontiers in Bioengineering and Biotechnology.2020;[Epub]     CrossRef
  • Complete Genome Sequence of Pseudomonas psychrotolerans CS51, a Plant Growth-Promoting Bacterium, Under Heavy Metal Stress Conditions
    Sang-Mo Kang, Sajjad Asaf, Abdul Latif Khan, Lubna, Adil Khan, Bong-Gyu Mun, Muhammad Aaqil Khan, Humaira Gul, In-Jung Lee
    Microorganisms.2020; 8(3): 382.     CrossRef
  • Sphingomonas: from diversity and genomics to functional role in environmental remediation and plant growth
    Sajjad Asaf, Muhammad Numan, Abdul Latif Khan, Ahmed Al-Harrasi
    Critical Reviews in Biotechnology.2020; 40(2): 138.     CrossRef
  • Application of Transposon Insertion Sequencing to Agricultural Science
    Belinda K. Fabian, Sasha G. Tetu, Ian T. Paulsen
    Frontiers in Plant Science.2020;[Epub]     CrossRef
  • Effect of Applying Struvite and Organic N as Recovered Fertilizers on the Rhizosphere Dynamics and Cultivation of Lupine (Lupinus angustifolius)
    Ana A. Robles-Aguilar, Oliver Grunert, Emma Hernandez-Sanabria, Mohamed Mysara, Erik Meers, Nico Boon, Nicolai D. Jablonowski
    Frontiers in Plant Science.2020;[Epub]     CrossRef
  • Poly-γ-glutamic acid-producing bacteria reduced Cd uptake and effected the rhizosphere microbial communities of lettuce
    Xiaohan Wang, Geyu Dong, Xingwang Liu, Shengkui Zhang, Can Li, Xianqin Lu, Tao Xia
    Journal of Hazardous Materials.2020; 398: 123146.     CrossRef
  • Sphingomonas hominis sp. nov., isolated from hair of a 21-year-old girl
    Dao-Feng Zhang, Xi-Wen Cui, Zhe Zhao, Ai-Hua Zhang, Jian-Ke Huang, Wen-Jun Li
    Antonie van Leeuwenhoek.2020; 113(10): 1523.     CrossRef
  • Fungal and Bacterial Microbiome Associated with the Rhizosphere of Native Plants from the Atacama Desert
    Alejandra Fuentes, Héctor Herrera, Trevor C. Charles, Cesar Arriagada
    Microorganisms.2020; 8(2): 209.     CrossRef
  • Extending thermotolerance to tomato seedlings by inoculation with SA1 isolate of Bacillus cereus and comparison with exogenous humic acid application
    Muhammad Aaqil Khan, Sajjad Asaf, Abdul Latif Khan, Rahmatullah Jan, Sang-Mo Kang, Kyung-Min Kim, In-Jung Lee, Haitao Shi
    PLOS ONE.2020; 15(4): e0232228.     CrossRef
  • Complete genome sequence of Sphingomonas sp. Cra20, a drought resistant and plant growth promoting rhizobacteria
    Yang Luo, Meng Zhou, Qi Zhao, Fang Wang, Jiangli Gao, Hongmei Sheng, Lizhe An
    Genomics.2020; 112(5): 3648.     CrossRef
  • Leaf-associated microbiomes of grafted tomato plants
    Hirokazu Toju, Koji Okayasu, Michitaka Notaguchi
    Scientific Reports.2019;[Epub]     CrossRef
  • Endophytic bacterial communities of Jingbai Pear trees in north China analyzed with Illumina sequencing of 16S rDNA
    Fei Ren, Wei Dong, Dong-Hui Yan
    Archives of Microbiology.2019; 201(2): 199.     CrossRef
  • Alleviation of salt stress response in soybean plants with the endophytic bacterial isolate Curtobacterium sp. SAK1
    Muhammad Aaqil Khan, Sajjad Asaf, Abdul Latif Khan, Ihsan Ullah, Sajid Ali, Sang-Mo Kang, In-Jung Lee
    Annals of Microbiology.2019; 69(8): 797.     CrossRef
  • Endophytic Bacteria in Plant Salt Stress Tolerance: Current and Future Prospects
    Anukool Vaishnav, Awadhesh K. Shukla, Anjney Sharma, Roshan Kumar, Devendra K. Choudhary
    Journal of Plant Growth Regulation.2019; 38(2): 650.     CrossRef
  • Metal Resistant Endophytic Bacteria Reduces Cadmium, Nickel Toxicity, and Enhances Expression of Metal Stress Related Genes with Improved Growth of Oryza Sativa, via Regulating Its Antioxidant Machinery and Endogenous Hormones
    Rahmatullah Jan, Muhammad Aaqil Khan, Sajjad Asaf, Lubna, In-Jung Lee, Kyung Min Kim
    Plants.2019; 8(10): 363.     CrossRef
  • Integrated phytohormone production by the plant growth-promoting rhizobacterium Bacillus tequilensis SSB07 induced thermotolerance in soybean
    Sang-Mo Kang, Abdul Latif Khan, Muhammad Waqas, Sajjad Asaf, Ko-Eun Lee, Yeon-Gyeong Park, Ah-Yeong Kim, Muhammad Aaqil Khan, Young-Hyun You, In-Jung Lee
    Journal of Plant Interactions.2019; 14(1): 416.     CrossRef
  • Sphingomonas sp. Cra20 Increases Plant Growth Rate and Alters Rhizosphere Microbial Community Structure of Arabidopsis thaliana Under Drought Stress
    Yang Luo, Fang Wang, Yaolong Huang, Meng Zhou, Jiangli Gao, Taozhe Yan, Hongmei Sheng, Lizhe An
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Diversity, distribution and multi‐functional attributes of bacterial communities associated with the rhizosphere and endosphere of timothy (Phleum pratenseL.)
    D. Saleh, J. Jarry, M. Rani, K.A. Aliferis, P. Seguin, S.H. Jabaji
    Journal of Applied Microbiology.2019; 127(3): 794.     CrossRef
  • Halo-tolerant rhizospheric Arthrobacter woluwensis AK1 mitigates salt stress and induces physio-hormonal changes and expression of GmST1 and GmLAX3 in soybean
    Muhammad Aaqil Khan, Ihsan Ullah, Muhammad Waqas, Muhammad Hamayun, Abdul Latif Khan, Sajjad Asaf, Sang-Mo Kang, Kyung-Min Kim, Rahmatullah Jan, In-Jung Lee
    Symbiosis.2019; 77(1): 9.     CrossRef
  • Drought tolerance improvement in plants: an endophytic bacterial approach
    Abid Ullah, Mohammad Nisar, Hazrat Ali, Ali Hazrat, Kashif Hayat, Ayaz Ali Keerio, Muhammad Ihsan, Muhammad Laiq, Sana Ullah, Shah Fahad, Aziz Khan, Aamir Hamid Khan, Adnan Akbar, Xiyan Yang
    Applied Microbiology and Biotechnology.2019; 103(18): 7385.     CrossRef
  • Fumigation coupled with bio-organic fertilizer for the suppression of watermelon Fusarium wilt disease re-shapes the soil microbiome
    Chao Xue, Zongzhuan Shen, Yuewen Hao, Sitian Yu, Yuchan Li, Weijie Huang, Yao Chong, Wei Ran, Rong Li, Qirong Shen
    Applied Soil Ecology.2019; 140: 49.     CrossRef
  • Effect of the inoculation of plant growth-promoting rhizobacteria on the photosynthetic characteristics of Sambucus williamsii Hance container seedlings under drought stress
    Fangchun Liu, Hailin Ma, Lin Peng, Zhenyu Du, Bingyao Ma, Xinghong Liu
    AMB Express.2019;[Epub]     CrossRef
  • Beneficial and Pathogenic Arabidopsis Root-Interacting Fungi Differently Affect Auxin Levels and Responsive Genes During Early Infection
    Anja K. Meents, Alexandra C. U. Furch, Marília Almeida-Trapp, Sedef Özyürek, Sandra S. Scholz, Alexander Kirbis, Teresa Lenser, Günter Theißen, Veit Grabe, Bill Hansson, Axel Mithöfer, Ralf Oelmüller
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Synthesis of Biologically Active Gibberellins GA4 and GA7 by Microorganisms
    T.P. Pirog, D.V. Havrylkina, N.O. Leonova, T.A. Shevchuk, G.O. Iutynska
    Mikrobiolohichnyi Zhurnal.2019; 81(2): 90.     CrossRef
  • Effect of Long-Term Farming Practices on Agricultural Soil Microbiome Members Represented by Metagenomically Assembled Genomes (MAGs) and Their Predicted Plant-Beneficial Genes
    Johanna Nelkner, Christian Henke, Timo Wentong Lin, Wiebke Pätzold, Julia Hassa, Sebastian Jaenicke, Rita Grosch, Alfred Pühler, Alexander Sczyrba, Andreas Schlüter
    Genes.2019; 10(6): 424.     CrossRef
  • Paenibacillusstrains with nitrogen fixation and multiple beneficial properties for promoting plant growth
    Xiaomeng Liu, Qin Li, Yongbin Li, Guohua Guan, Sanfeng Chen
    PeerJ.2019; 7: e7445.     CrossRef
  • Diversity and Functionality of Culturable Endophytic Bacterial Communities in Chickpea Plants
    Clarisse Brígido, Sakshi Singh, Esther Menéndez, Maria Tavares, Bernard Glick, Maria Félix, Solange Oliveira, Mário Carvalho
    Plants.2019; 8(2): 42.     CrossRef
  • Draft Genome Sequence of the UV-Resistant Antarctic Bacterium Sphingomonas sp. Strain UV9
    Juan J. Marizcurrena, Danilo Morales, Pablo Smircich, Susana Castro-Sowinski, John J. Dennehy
    Microbiology Resource Announcements.2019;[Epub]     CrossRef
  • Bitki Probiyotik Bakteriler: Bitkiler Üzerindeki Rolleri ve Uygulamalar
    Çiğdem KÜÇÜK
    International Journal of Life Sciences and Biotechnology.2019; 2(1): 1.     CrossRef
  • Decoding Wheat Endosphere–Rhizosphere Microbiomes in Rhizoctonia solani–Infested Soils Challenged by Streptomyces Biocontrol Agents
    Ricardo Araujo, Christopher Dunlap, Steve Barnett, Christopher M.M. Franco
    Frontiers in Plant Science.2019;[Epub]     CrossRef
  • Pre-colonization of PGPR triggers rhizosphere microbiota succession associated with crop yield enhancement
    Yang Zhang, Xu Gao, Zongzhuan Shen, Chengzhi Zhu, Zixuan Jiao, Rong Li, Qirong Shen
    Plant and Soil.2019; 439(1-2): 553.     CrossRef
  • Biotransformation of benzoin by Sphingomonas sp. LK11 and ameliorative effects on growth of Cucumis sativus
    Amjad Ali, Tapan Kumar Mohanta, Sajjad Asaf, Najeebur Rehman, Saif Al-Housni, Ahmed Al-Harrasi, Abdul Latif Khan, Ahmed Al-Rawahi
    Archives of Microbiology.2019; 201(5): 591.     CrossRef
  • Comparison of Microbial Community of Rhizosphere and Endosphere in Kiwifruit
    Min-Jung Kim, Heeil Do, Gyeongjun Cho, Rae-Dong Jeong, Youn-Sig Kwak
    The Plant Pathology Journal.2019; 35(6): 705.     CrossRef
  • Tomato plants rather than fertilizers drive microbial community structure in horticultural growing media
    Oliver Grunert, Ana A. Robles-Aguilar, Emma Hernandez-Sanabria, Silvia D. Schrey, Dirk Reheul, Marie-Christine Van Labeke, Siegfried E. Vlaeminck, Tom G. L. Vandekerckhove, Mohamed Mysara, Pieter Monsieurs, Vicky M. Temperton, Nico Boon, Nicolai D. Jablon
    Scientific Reports.2019;[Epub]     CrossRef
  • The Xylella fastidiosa-Resistant Olive Cultivar “Leccino” Has Stable Endophytic Microbiota during the Olive Quick Decline Syndrome (OQDS)
    Marzia Vergine, Joana B. Meyer, Massimiliano Cardinale, Erika Sabella, Martin Hartmann, Paolo Cherubini, Luigi De Bellis, Andrea Luvisi
    Pathogens.2019; 9(1): 35.     CrossRef
  • Prospecting endophytes from different Fe or Zn accumulating wheat genotypes for their influence as inoculants on plant growth, yield, and micronutrient content
    Devendra Singh, Neelam Geat, Mahendra Vikram Singh Rajawat, Radha Prasanna, Abhijit Kar, Anju Mahendru Singh, Anil Kumar Saxena
    Annals of Microbiology.2018; 68(12): 815.     CrossRef
  • Interspecific Plant Interactions Reflected in Soil Bacterial Community Structure and Nitrogen Cycling in Primary Succession
    Joseph E. Knelman, Emily B. Graham, Janet S. Prevéy, Michael S. Robeson, Patrick Kelly, Eran Hood, Steve K. Schmidt
    Frontiers in Microbiology.2018;[Epub]     CrossRef
  • Mechanisms of Cr(VI) resistance by endophytic Sphingomonas sp. LK11 and its Cr(VI) phytotoxic mitigating effects in soybean (Glycine max L.)
    Saqib Bilal, Abdul Latif Khan, Raheem Shahzad, Yoon-Ha Kim, Muhammad Imran, Muhammad Jamil Khan, Ahmed Al-Harrasi, Tae Han Kim, In-Jung Lee
    Ecotoxicology and Environmental Safety.2018; 164: 648.     CrossRef
  • The Green Roof Microbiome: Improving Plant Survival for Ecosystem Service Delivery
    Roberta Fulthorpe, J. Scott MacIvor, Pu Jia, Simone-Louise E. Yasui
    Frontiers in Ecology and Evolution.2018;[Epub]     CrossRef
  • Endophytic Microbial Consortia of Phytohormones-Producing Fungus Paecilomyces formosus LHL10 and Bacteria Sphingomonas sp. LK11 to Glycine max L. Regulates Physio-hormonal Changes to Attenuate Aluminum and Zinc Stresses
    Saqib Bilal, Raheem Shahzad, Abdul L. Khan, Sang-Mo Kang, Qari M. Imran, Ahmed Al-Harrasi, Byung-Wook Yun, In-Jung Lee
    Frontiers in Plant Science.2018;[Epub]     CrossRef
  • Cultivated bacterial diversity associated with the carnivorous plant Utricularia breviscapa (Lentibulariaceae) from floodplains in Brazil
    Felipe Rezende Lima, Almir José Ferreira, Cristine Gobbo Menezes, Vitor Fernandes Oliveira Miranda, Manuella Nóbrega Dourado, Welington Luiz Araújo
    Brazilian Journal of Microbiology.2018; 49(4): 714.     CrossRef
  • Variations in total phenolics and antioxidant enzymes cause phenotypic variability and differential resistant response in tomato genotypes against early blight disease
    Zoia Arshad Awan, Amna Shoaib, Kashif Ali Khan
    Scientia Horticulturae.2018; 239: 216.     CrossRef
  • Complete genome sequencing and analysis of endophytic Sphingomonas sp. LK11 and its potential in plant growth
    Sajjad Asaf, Abdul Latif Khan, Muhammad Aaqil Khan, Ahmed Al-Harrasi, In-Jung Lee
    3 Biotech.2018;[Epub]     CrossRef
  • Bacterial community structure associated with the rhizosphere soils and roots of Stellera chamaejasme L. along a Tibetan elevation gradient
    Hui Jin, Xiaoyan Yang, Rentao Liu, Zhiqiang Yan, Xudong Li, Xiuzhuang Li, Anxiang Su, Yuhui Zhao, Bo Qin
    Annals of Microbiology.2018; 68(5): 273.     CrossRef
  • Synergistic plant–microbe interactions between endophytic bacterial communities and the medicinal plant Glycyrrhiza uralensis F.
    Li Li, Osama Abdalla Abdelshafy Mohamad, Jinbiao Ma, Ariel D. Friel, Yangui Su, Yun Wang, Zulpiya Musa, Yonghong Liu, Brian P. Hedlund, Wenjun Li
    Antonie van Leeuwenhoek.2018; 111(10): 1735.     CrossRef
  • How Does Salinity Shape Bacterial and Fungal Microbiomes of Alnus glutinosa Roots?
    Dominika Thiem, Marcin Gołębiewski, Piotr Hulisz, Agnieszka Piernik, Katarzyna Hrynkiewicz
    Frontiers in Microbiology.2018;[Epub]     CrossRef
  • Gibberellin biosynthesis and metabolism: A convergent route for plants, fungi and bacteria
    Sonia Salazar-Cerezo, Nancy Martínez-Montiel, Jenny García-Sánchez, Rocío Pérez-y-Terrón, Rebeca D. Martínez-Contreras
    Microbiological Research.2018; 208: 85.     CrossRef
  • Antibacterial activity of endophytic fungi from the medicinal plant Uncaria tomentosa (Willd.) DC
    Asfury Rodrigues Rodrigo, Vasconcelos de Araujo Atilon, Moura da Cunha Renildo, Maia Carvalho Clarice
    Journal of Medicinal Plants Research.2018; 12(15): 179.     CrossRef
  • Isolation and Identification of Bacterial Endophytes from Grasses along the Oregon Coast
    James E. Dombrowski, Vicky G. Hollenbeck, Ruth C. Martin
    American Journal of Plant Sciences.2017; 08(03): 574.     CrossRef
  • Bacillus amyloliquefaciens BSL16 improves phytoremediation potential of Solanum lycopersicum during copper stress
    Abdul Latif Khan, Saqib Bilal, Boshra Ahmed Halo, Ahmed Al-Harrasi, Abdur Rahim Khan, Muhammad Waqas, Ghanim Salim Al-Thani, Issa Al-Amri, Ahmed Al-Rawahi, In-Jung Lee
    Journal of Plant Interactions.2017; 12(1): 550.     CrossRef
  • Osmoprotective functions conferred to soybean plants via inoculation with Sphingomonas sp. LK11 and exogenous trehalose
    Sajjad Asaf, Abdul Latif Khan, Muhammad Aaqil Khan, Qari Muhammad Imran, Byung-Wook Yun, In-Jung Lee
    Microbiological Research.2017; 205: 135.     CrossRef
  • Beneficial traits of bacterial endophytes belonging to the core communities of the tomato root microbiome
    Baoyu Tian, Cuijuan Zhang, Yuan Ye, Jiaming Wen, Yimin Wu, Hongzhu Wang, Huimin Li, Shixian Cai, Weiting Cai, Zhiqiang Cheng, Shaonan Lei, Rongqin Ma, Chaojun Lu, Yi Cao, Xiaohong Xu, Keqin Zhang
    Agriculture, Ecosystems & Environment.2017; 247: 149.     CrossRef
  • Endophytic bacterial diversity of Avicennia marina helps to confer resistance against salinity stress in Solanum lycopersicum
    Amjad Ali, Raheem Shahzad, Abdul Latif Khan, Boshera A. Halo, Rashid Al-Yahyai, Ahmed Al-Harrasi, Ahmed Al-Rawahi, In-Jung Lee
    Journal of Plant Interactions.2017; 12(1): 312.     CrossRef
  • Bottlenecks in commercialisation and future prospects of PGPR
    Bushra Tabassum, Anwar Khan, Muhammad Tariq, Memoona Ramzan, Muhammad Saleem Iqbal Khan, Naila Shahid, Khadija Aaliya
    Applied Soil Ecology.2017; 121: 102.     CrossRef
  • The Effects of the Endophytic Bacterium Pseudomonas fluorescens Sasm05 and IAA on the Plant Growth and Cadmium Uptake of Sedum alfredii Hance
    Bao Chen, Sha Luo, Yingjie Wu, Jiayuan Ye, Qiong Wang, Xiaomeng Xu, Fengshan Pan, Kiran Y. Khan, Ying Feng, Xiaoe Yang
    Frontiers in Microbiology.2017;[Epub]     CrossRef
  • Bacterial endophytes from arid land plants regulate endogenous hormone content and promote growth in crop plants: an example of Sphingomonas sp. and Serratia marcescens
    Sajjad Asaf, Muhammad Aaqil Khan, Abdul Latif Khan, Muhammad Waqas, Raheem Shahzad, Ah-Yeong Kim, Sang-Mo Kang, In-Jung Lee
    Journal of Plant Interactions.2017; 12(1): 31.     CrossRef
  • Isolation and characterization of a novel silicate-solubilizing bacterial strainBurkholderia eburneaCS4-2 that promotes growth of japonica rice (Oryza sativaL. cv. Dongjin)
    Sang-Mo Kang, Muhammad Waqas, Raheem Shahzad, Young-Hyun You, Sajjad Asaf, Muhammad Aaqil Khan, Ko-Eun Lee, Gil-Jae Joo, Sang-Jun Kim, In-Jung Lee
    Soil Science and Plant Nutrition.2017; : 1.     CrossRef
  • Diverse culturable diazotrophic endophytic bacteria from Poaceae plants show cross-colonization and plant growth promotion in wheat
    Janki K. Patel, G. Archana
    Plant and Soil.2017; 417(1-2): 99.     CrossRef
  • Phylloplane bacteria of Jatropha curcas: diversity, metabolic characteristics, and growth-promoting attributes towards vigor of maize seedling
    Garima Dubey, Bharati Kollah, Usha Ahirwar, Asit Mandal, Jyoti Kumar Thakur, Ashok Kumar Patra, Santosh Ranjan Mohanty
    Canadian Journal of Microbiology.2017; 63(10): 822.     CrossRef
  • Comparison of Prokaryotic and Eukaryotic Communities in Soil Samples with and without Tomato Bacterial Wilt Collected from Different Fields
    Chol Gyu Lee, Toshiya Iida, Yohei Uwagaki, Yoko Otani, Kazuhiro Nakaho, Moriya Ohkuma
    Microbes and environments.2017; 32(4): 376.     CrossRef
  • Inner Plant Values: Diversity, Colonization and Benefits from Endophytic Bacteria
    Hongwei Liu, Lilia C. Carvalhais, Mark Crawford, Eugenie Singh, Paul G. Dennis, Corné M. J. Pieterse, Peer M. Schenk
    Frontiers in Microbiology.2017;[Epub]     CrossRef
  • Plant growth-promoting endophyte Sphingomonas sp. LK11 alleviates salinity stress in Solanum pimpinellifolium
    Abdul Latif Khan, Muhammad Waqas, Sajjad Asaf, Muhammad Kamran, Raheem Shahzad, Saqib Bilal, Muhammad Aaqil Khan, Sang-Mo Kang, Yoon-Ha Kim, Byung-Wook Yun, Ahmed Al-Rawahi, Ahmed Al-Harrasi, In-Jung Lee
    Environmental and Experimental Botany.2017; 133: 58.     CrossRef
  • Effect of GFP-tagging on nitrogen fixation and plant growth promotion of an endophytic diazotrophic strain of Paenibacillus polymyxa
    Kiran Preet Padda, Akshit Puri, Qingwei Zeng, Chris P. Chanway, Xiaoqin Wu
    Botany.2017; 95(9): 933.     CrossRef
  • Biofertilizers: a potential approach for sustainable agriculture development
    Trishna Mahanty, Surajit Bhattacharjee, Madhurankhi Goswami, Purnita Bhattacharyya, Bannhi Das, Abhrajyoti Ghosh, Prosun Tribedi
    Environmental Science and Pollution Research.2017; 24(4): 3315.     CrossRef
  • Endophytes of Jatropha curcas promote growth of maize
    Santosh Ranjan Mohanty, Garima Dubey, Bharati Kollah
    Rhizosphere.2017; 3: 20.     CrossRef
  • Colonization and Maize Growth Promotion Induced by Phosphate Solubilizing Bacterial Isolates
    Yongbin Li, Xiaomeng Liu, Tianyi Hao, Sanfeng Chen
    International Journal of Molecular Sciences.2017; 18(7): 1253.     CrossRef
  • Regulations of essential amino acids and proteomics of bacterial endophytes Sphingomonas sp. Lk11 during cadmium uptake
    Abdul Latif Khan, Ihsan Ullah, Javid Hussain, Sang‐Mo Kang, Ahmed Al‐Harrasi, Ahmed Al‐Rawahi, In‐Jung Lee
    Environmental Toxicology.2016; 31(7): 887.     CrossRef
  • Native Phytoremediation Potential of Urtica dioica for Removal of PCBs and Heavy Metals Can Be Improved by Genetic Manipulations Using Constitutive CaMV 35S Promoter
    Jitka Viktorova, Zuzana Jandova, Michaela Madlenakova, Petra Prouzova, Vilem Bartunek, Blanka Vrchotova, Petra Lovecka, Lucie Musilova, Tomas Macek, Pankaj Kumar Arora
    PLOS ONE.2016; 11(12): e0167927.     CrossRef
  • The biosynthesis of gibberellic acids by the transformants of orchid-associated Fusarium oxysporum
    Elena A. Tsavkelova
    Mycological Progress.2016;[Epub]     CrossRef
  • Dendrobium nobile Lindl. seed germination in co-cultures with diverse associated bacteria
    Elena A. Tsavkelova, Maria A. Egorova, Maria R. Leontieva, Sophie G. Malakho, Galina L. Kolomeitseva, Alexander I. Netrusov
    Plant Growth Regulation.2016; 80(1): 79.     CrossRef
  • Diversity of indigenous endophytic bacteria associated with the roots of Chinese cabbage (Brassica campestris L.) cultivars and their antagonism towards pathogens
    Md. Azizul Haque, Han Dae Yun, Kye Man Cho
    Journal of Microbiology.2016; 54(5): 353.     CrossRef
  • Plant growth-promoting effects of rhizospheric and endophytic bacteria associated with different tomato cultivars and new tomato hybrids
    Gennaro Roberto Abbamondi, Giuseppina Tommonaro, Nele Weyens, Sofie Thijs, Wouter Sillen, Panagiotis Gkorezis, Carmine Iodice, Wesley de Melo Rangel, Barbara Nicolaus, Jaco Vangronsveld
    Chemical and Biological Technologies in Agriculture.2016;[Epub]     CrossRef
  • A Complex Molecular Interplay of Auxin and Ethylene Signaling Pathways Is Involved in Arabidopsis Growth Promotion by Burkholderia phytofirmans PsJN
    María J. Poupin, Macarena Greve, Vicente Carmona, Ignacio Pinedo
    Frontiers in Plant Science.2016;[Epub]     CrossRef
  • Crop management as a driving force of plant growth promoting rhizobacteria physiology
    Juliana Melo, Manuela Carolino, Luís Carvalho, Patrícia Correia, Rogério Tenreiro, Sandra Chaves, Ana I. Meleiro, Sávio B. de Souza, Teresa Dias, Cristina Cruz, Alessandro C. Ramos
    SpringerPlus.2016;[Epub]     CrossRef
  • Culturable endophytic bacteria associated with medicinal plant Ferula songorica: molecular phylogeny, distribution and screening for industrially important traits
    Yong-Hong Liu, Jian-Wei Guo, Nimaichand Salam, Li Li, Yong-Guang Zhang, Jian Han, Osama Abdalla Mohamad, Wen-Jun Li
    3 Biotech.2016;[Epub]     CrossRef
  • Role of Plant Growth Promoting Rhizobacteria in Agricultural Sustainability—A Review
    Pravin Vejan, Rosazlin Abdullah, Tumirah Khadiran, Salmah Ismail, Amru Nasrulhaq Boyce
    Molecules.2016; 21(5): 573.     CrossRef
  • Response of leaf endophytic bacterial community to elevated CO2 at different growth stages of rice plant
    Gaidi Ren, Huayong Zhang, Xiangui Lin, Jianguo Zhu, Zhongjun Jia
    Frontiers in Microbiology.2015;[Epub]     CrossRef
  • Diversity and distribution of endophytic bacterial community in the Noni (Morinda citrifolia L.) plant
    Liu Yang, Li Yinhu, Yao Su, Wang Hui, Cao Yanhua, Li Jie, Bai Feirong, Qiu Chuangzhao, Feng Xin, Dai Wenkui, Cheng Chi
    African Journal of Microbiology Research.2015; 9(25): 1649.     CrossRef
  • Indole: a signaling molecule or a mere metabolic byproduct that alters bacterial physiology at a high concentration?
    Jisun Kim, Woojun Park
    Journal of Microbiology.2015; 53(7): 421.     CrossRef
  • Endophytic bacteria (Sphingomonassp. LK11) and gibberellin can improveSolanum lycopersicumgrowth and oxidative stress under salinity
    Boshra Ahmed Halo, Abdul Latif Khan, Muhammad Waqas, Ahmed Al-Harrasi, Javid Hussain, Liaqat Ali, Muhammad Adnan, In-Jung Lee
    Journal of Plant Interactions.2015; 10(1): 117.     CrossRef
Journal Article
Introducing EzAAI: a pipeline for high throughput calculations of prokaryotic average amino acid identity
Dongwook Kim , Sein Park , Jongsik Chun
J. Microbiol. 2021;59(5):476-480.   Published online April 28, 2021
DOI: https://doi.org/10.1007/s12275-021-1154-0
  • 620 View
  • 0 Download
  • 339 Web of Science
  • 309 Crossref
AbstractAbstract PDF
The average amino acid identity (AAI) is an index of pairwise genomic relatedness, and multiple studies have proposed its application in prokaryotic taxonomy and related disciplines. AAI demonstrates better resolution in elucidating taxonomic structure beyond the species rank when compared with average nucleotide identity (ANI), which is a standard criterion in species delineation. However, an efficient and easy-to-use computational tool for AAI calculation in large-scale taxonomic studies is not yet available. Here, we introduce a bioinformatic pipeline, named EzAAI, which allows for rapid and accurate AAI calculation in prokaryote sequences. The EzAAI tool is based on the MMSeqs2 program and computes AAI values almost identical to those generated by the standard BLAST algorithm with significant improvements in the speed of these evaluations. Our pipeline also provides a function for hierarchical clustering to create dendrograms, which is an essential part of any taxonomic study. EzAAI is available for download as a standalone JAVA program at http:// leb.snu.ac.kr/ezaai.

Citations

Citations to this article as recorded by  
  • Parasalinivibrio latis gen. nov., sp. nov., isolated from the distal gut of healthy farmed Asian Seabass (Lates calcarifer)
    Shuan Er, Melissa Soh, Adrian Low, Henning Seedorf
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Acidisoma cladoniae sp. nov., an acidotolerant bacterium isolated from an Antarctic lichen
    Un Cho, Jehyun Jeon, Woohyun Kim, Soon Gyu Hong, Hyoungseok Lee, Yung Mi Lee
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Phenylobacterium ferrooxidans sp. nov., isolated from a sub-surface geothermal aquifer in Iceland
    Eva Pouder, Erwann Vince, Karen Jacquot, Maimouna batoma Traoré, Ashley Grosche, Maria Ludwig, Mohamed Jebbar, Loïs Maignien, Karine Alain, Sophie Mieszkin
    Systematic and Applied Microbiology.2025; 48(1): 126578.     CrossRef
  • Streptomyces yaizuensis sp. nov., a berninamycin C-producing actinomycete isolated from sponge
    Miku Takahashi, Kanata Hoshino, Moriyuki Hamada, Tomohiko Tamura, Ryota Moriuchi, Hideo Dohra, Youji Nakagawa, Susumu Kokubo, Motoyuki Yamazaki, Hiroyuki Nakagawa, Masayuki Hayakawa, Shinya Kodani, Hideki Yamamura
    The Journal of Antibiotics.2025; 78(1): 35.     CrossRef
  • Advanced aspects of acetogens
    Anja Poehlein, Benjamin Zeldes, Maximilian Flaiz, Tim Böer, Alina Lüschen, Franziska Höfele, Kira S. Baur, Bastian Molitor, Christian Kröly, Meng Wang, Quan Zhang, Yixuan Fan, Wei Chao, Rolf Daniel, Fuli Li, Mirko Basen, Volker Müller, Largus T. Angenent,
    Bioresource Technology.2025; 427: 131913.     CrossRef
  • Description of Hyphococcus formosus sp. nov. and Hyphococcus lacteus sp. nov., isolated from coastal sediment, and reclassification of Marinicaulis flavus as Hyphococcus luteus nom. nov. and Marinicaulis aureus as Hyphococcus aureus comb. nov
    Yu-Qi Ye, Xin-Yue Zhang, Hong-Nan Gong, Meng-Qi Ye, Zong-Jun Du
    Systematic and Applied Microbiology.2025; 48(1): 126575.     CrossRef
  • Methyloraptor flagellatus gen. nov., sp. nov., novel Ancalomicrobiaceae-affiliated facultatively methylotrophic bacteria that feed on methanotrophs of the genus Methylococcus
    Victoria A. Saltykova, Olga V. Danilova, Igor Y. Oshkin, Svetlana E. Belova, Natalia E. Suzina, Nikolai V. Pimenov, Svetlana N. Dedysh
    Systematic and Applied Microbiology.2025; 48(1): 126565.     CrossRef
  • Taxonomic and genomic characterization of a siderophore-producing bacterium, Rhodoligotrophos ferricapiens sp. nov isolated from lettuce cultivation soil
    Yu-Jin Kim, Yong-Seok Kim, Chang-Jun Cha
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Florfenicol-resistant Brevundimonas sanguinis sp. nov., a novel bacterium isolated from patient blood in South Korea
    Ji Hee Lee, Yewon An, Su Yeon Kim
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Aquibaculum sediminis sp. nov., a halotolerant bacteria isolated from salt lake sediment
    Qing-Yu Xu, Lei Gao, Dildar Wu, Xin-Yao Li, Yong-Hong Liu, Yao Zhang, Yue-Heng Chen, Ting-Ting She, Bao-Zhu Fang, Wen-Jun Li
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Infection signatures of multiple Nucleocytoviricota virus lineages in the brown algae Undaria pinnatifida revealed by population-wide genome analysis
    Hiroki Ban
    Journal of Applied Phycology.2025; 37(4): 2705.     CrossRef
  • Genomic insights into novel predatory myxobacteria isolated from human feces
    Joyasree Das, Shilpee Pal, Anu Negi, Shiva S. Sundharam, Amit Yadav, Srikrishna Subramanian, S. K. Sinha, Jayanta Samanta, Srinivasan Krishnamurthi, Jan Claesen
    Microbiology Spectrum.2025;[Epub]     CrossRef
  • Polyphasic Taxonomic Analysis of Pontitalea aquivivens gen. nov., sp. nov., Isolated from Seawater
    Jaewoo Yoon
    Current Microbiology.2025;[Epub]     CrossRef
  • Flavobacterium arundinis sp. nov., Flavobacterium calami sp. nov., Flavobacterium helocola sp. nov. and Flavobacterium flavipallidum sp. nov., isolated from stagnant water in a clump of Phragmites japonica Steud
    Sunho Park, Inhyup Kim, Haejin Woo, Hyunji Lee, Subin Yook, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Virgifigura deserti gen. nov., sp. nov., isolated from the Gurbantunggut Desert soil
    Qi Li, Zi-Qi Peng, Wen-Ling Liu, Zhen-Hao Luo, Shuai Li, Wen-Jun Li, Lei Dong
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Resolution of MALDI-TOF compared to whole genome sequencing for identification of Bacillus species isolated from cleanrooms at NASA Johnson Space Center
    Farnaz Mazhari, Aaron B. Regberg, Christian L. Castro, Michael G. LaMontagne
    Frontiers in Microbiology.2025;[Epub]     CrossRef
  • Thalassobellus suaedae gen. nov., sp. nov., a marine bacterium of the family Flavobacteriaceae isolated from a halophyte Suaeda japonica
    Su Yeon Lee, Ami Rho, Jy Young Choi, Jaeho Choi, Bo Min Lee, Byung Cheol Cho, Chung Yeon Hwang
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Nocardioides eburneus sp. nov., isolated from commercial soil
    Min-Seok Kang, Jae-yon Yu, Yong Ho Kim, Ke Dong, Sathiyaraj Srinivasan, Sang-Seob Lee
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Rubrolithibacter danxiaensis gen. nov., sp. nov. isolated from red sandy conglomerate in the Danxia Mountain
    Wen-Hui Lian, Huan-Huan He, Ying Wang, Zhuo-Huan Zheng, Fang Chen, Ting Zhou, Chao-Jian Hu, Jia-Rui Han, Lei Dong, Wen-Jun Li
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Bacteria in the Phylum Bacillota Degrade Nicotine Through the Variant of Pyridine and Pyrrolidine Pathway
    Xiu-Ming Liu, Xuan Hai, Cong-Jian Li, Yu-Fan Han, Xing Chen, Yu-Jin Fan, Jian Wu, En-Min Zhou, Yuan-Dong Li, Ling-Ling Yang, Yan-Qing Duan, Xiao-Yang Zhi
    Current Microbiology.2025;[Epub]     CrossRef
  • Schlesneria sphaerica sp. nov., a neutrophilic, xylan-degrading planctomycete from a mountain wetland, and emended description of the genus Schlesneria
    Irina S Kulichevskaya, Anastasia A Ivanova, Daniil G Naumoff, Anna A Zlatogorskaya, Gennady S Kachmazov, Svetlana N Dedysh
    FEMS Microbiology Letters.2025;[Epub]     CrossRef
  • Characterization of three novel Helicobacter species infecting stomachs of dogs and cats: Helicobacter gastrocanis sp. nov., Helicobacter gastrofelis sp. nov., and Helicobacter felistomachi sp. nov.
    Emiko Rimbara, Sae Aoki, Masato Suzuki, Hirotaka Kobayashi, Taisuke Nakagawa, Yuko Goto-Koshino, Sachiyo Nomura, Wan-Ying Du, Hidenori Matsui, Shigetarou Mori, Keigo Shibayama, Tsuyoshi Kenri, Koichi Ohno
    Frontiers in Microbiology.2025;[Epub]     CrossRef
  • Evolution of far-red light photoacclimation in cyanobacteria
    Laura A. Antonaru, Cecilia Rad-Menéndez, Susan Mbedi, Sarah Sparmann, Matthew Pope, Thomas Oliver, Shujie Wu, David H. Green, Muriel Gugger, Dennis J. Nürnberg
    Current Biology.2025; 35(11): 2539.     CrossRef
  • Genome-based classification and phylogenetic revision of the family Colwelliaceae with proposals for new genera and species
    Min Seo Lee, Sung-Hyun Yang, Yun Jae Kim, Yeong-Jun Park, Mi-Jeong Park, Kae Kyoung Kwon
    Frontiers in Ecology and Evolution.2025;[Epub]     CrossRef
  • FastAAI: efficient estimation of genome average amino acid identity and phylum-level relationships using tetramers of universal proteins
    Kenji Gerhardt, Carlos A Ruiz-Perez, Luis M Rodriguez-R, Chirag Jain, James M Tiedje, James R Cole, Konstantinos T Konstantinidis
    Nucleic Acids Research.2025;[Epub]     CrossRef
  • Reduction of enteric methane emission using methanotroph-based probiotics in Hanwoo steers
    Tenzin Tseten, Rey Anthony Sanjorjo, Jong-Wook Son, Keun Sik Baik, Janine I. Berdos, Seon-Ho Kim, Sang-Hwal Yoon, Min-Kyoung Kang, Moonhyuk Kwon, Sang-Suk Lee, Seon-Won Kim
    Animal Microbiome.2025;[Epub]     CrossRef
  • Isolation and Characterisation of Gracilimonas aurantiaca sp. nov., A Novel Bacterium Isolated from Tidal-Flat Sediment
    Jaincy N. Jayan, Sathiyaraj Srinivasan, Sang-Seob Lee
    Current Microbiology.2025;[Epub]     CrossRef
  • Closed genomes of commercial inoculant rhizobia provide a blueprint for management of legume inoculation
    MacLean G. Kohlmeier, Graham W. O'Hara, Joshua P. Ramsay, Jason J. Terpolilli, Gladys Alexandre
    Applied and Environmental Microbiology.2025;[Epub]     CrossRef
  • Flavonifractor porci sp. nov. and Flintibacter porci sp. nov., two novel butyrate-producing bacteria of the family Oscillospiraceae
    Han-Yu Niu, Jie Zhang, Hao-Jie Huang, Xin-Wei Sun, Hao-Yu Chen, Xiao-Meng Wang, Ci Liu, Ming-Xia Bi, Shuang-Jiang Liu
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Characterisation of Aequorivita ciconiae sp. nov., isolated from oriental stork, Ciconia boyciana
    Jeong-Eun Han, Seomin Kang, So-Yeon Lee, Jin-Woo Bae
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Sulfitobacter sediminis sp. nov., a novel halophilic bacterium isolated from tidal flat sediment
    Jaincy N. Jayan, Ke Dong, Sathiyaraj Srinivasan, Sang-Seob Lee
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Gracilimonas qinghaiensis sp. nov., a halophilic bacterium from a high-altitude saline lake exhibiting diverse metabolic potential and ecological adaptation
    Haohao Wang, Chi Zhang, Yaqin Chen, Yifan Guo, Lijian Ding, Shengfa Zhang, Gaijun Du, Weiyan Zhang, Shan He
    Current Research in Microbial Sciences.2025; 9: 100413.     CrossRef
  • Isolation and characterization of Sporomusa carbonis sp. nov.: a carboxydotrophic hydrogenogen in the genus of Sporomusa isolated from a charcoal-burning pile
    Tim Böer, Florian P. Rosenbaum, Lena Eysell, Volker Müller, Rolf Daniel, Anja Poehlein
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Paenibacillus zeirhizosphaerae sp. nov., isolated from surface of the maize (Zea mays) roots in a horticulture field, Hungary
    Dalma Márton, Milán Farkas, Anna Bedics, Erika Tóth, András Táncsics, Károly Bóka, Gergely Maróti, Erzsébet Baka, Balázs Kriszt, Mátyás Cserháti
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Marivivens marinum sp. nov., isolated from tidal flat, Gochang, South Korea
    Min-Seok Kang, Hyung-Seop Kim, Jae-yon Yu, Sathiyaraj Srinivasan, Sang-Seob Lee
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Jannaschia maritima sp. nov., a novel marine bacterium isolated from the biofilm of concrete breakwater structures
    Hao Feng, Shuyi Liang, Ruisi Li, Hui Wang, Runlin Cai
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Ascidiimonas meishanensis sp. nov. and Leptobacterium meishanense sp. nov., two bacteria isolated from marine sediment in the East China Sea
    Hao Wang, Huiting Wang, Xinyu Liu, Dawoon Jung, Eun-Young Seo, Shan He, Weiyan Zhang, Lijian Ding
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Meridianimarinicoccus marinus sp. nov., Isolated from Tidal Flat
    Min-Seok Kang, Jae-Yon Yu, Hyung-Seop Kim, Ke Dong, Sathiyaraj Srinivasan, Sang-Seob Lee
    Current Microbiology.2025;[Epub]     CrossRef
  • Taklimakanibacter albus sp. nov., an Endophytic Bacterial Species Isolated from the Root of Paris polyphylla var. yunnanensis
    Jin-Yu Tian, Zhen Zhang, Yu Zhao, Xiao-Yang Zhi, Ling-Ling Yang
    Current Microbiology.2025;[Epub]     CrossRef
  • Comprehensive genomic and functional analysis of Leuconostoc lactic acid bacteria in alcohol and acetaldehyde metabolism
    Joo-Han Gwak, Yun Ji Choi, Hina Ayub, Min Kyeong Seol, Hongik Kim, Man-Young Jung
    Journal of Microbiology.2025; 63(2): e2410026.     CrossRef
  • Comamonas squillarum sp. nov., Isolated from Intestine of Red Swamp Crayfish (Procambarus clarkii)
    Shi Shi, Dao-Feng Zhang, Hong-Chuan Wang, Fu-Hui Jiang, Li-Fan Cui, Ying Huang
    Current Microbiology.2025;[Epub]     CrossRef
  • Limibacterium fermenti gen. nov., sp. nov., a novel member of the family Dysgonomonadaceae isolated from the Chinese strong aroma-type Baijiu fermentation system
    Yang Gu, Huilin Wang, Xia Zhang, Zhiyun Peng, Jian Su, Dong Zhao, Jia Zheng
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Inconstantimicrobium mannanitabidum sp. nov., a novel member of the family Clostridiaceae isolated from anoxic soil under the treatment of reductive soil disinfestation
    Atsuko Ueki, Akio Tonouchi, Sachi Honma, Nobuo Kaku, Katsuji Ueki
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Halomonas pelophila sp. nov., isolated from mud and Halomonas aquatica sp. nov., isolated from marine water
    Subin Yook, Inhyup Kim, Sunho Park, Haejin Woo, Hyunji Lee, Taegun Seo
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Metabolic redundancy and specialisation of novel sulfide-oxidizing Sulfurimonas and Sulfurovum along the brine-seawater interface of the Kebrit Deep
    Rayyan Alamoudi, Alan Barozzi, Grégoire Michoud, Marc W. Van Goethem, Charlene Odobel, Yue Chen, Ramona Marasco, Daniele Daffonchio
    Environmental Microbiome.2025;[Epub]     CrossRef
  • Three Novel Bacterial Species, Roseateles flavus sp. nov., Roseateles paludis sp. nov., and Roseateles hydrophilus sp. nov., Isolated from Various Water-Related Environments
    Haejin Woo, Geeta Chhetri, Inhyup Kim, Sunho Park, Hyunji Lee, Subin Yook, Taegun Seo
    Current Microbiology.2025;[Epub]     CrossRef
  • Taxonomic, genomic, and ecological insights into a novel Flavobacteriaceae strain from coastal tidal flats
    Haohao Wang, Jiahui Liu, Yifan Guo, Yaqin Chen, Chi Zhang, Shan He, Weiyan Zhang, Lijian Ding
    BMC Microbiology.2025;[Epub]     CrossRef
  • High diversity of nitrifying bacteria and archaea in biofilms from a subsea tunnel
    Linnea F M Kop, Hanna Koch, Paula Dalcin Martins, Carolina Suarez, Sabina Karačić, Frank Persson, Britt-Marie Wilén, Per Hagelia, Mike S M Jetten, Sebastian Lücker
    FEMS Microbiology Ecology.2025;[Epub]     CrossRef
  • Dethiothermospora halolimnae gen. nov., sp. nov., a novel moderately halophilic, thermotolerant, bacterium isolated from a brine lake
    Luke A. Fisher, Saloni R. Dangre, Arthur Odenheimer, Nirav Patel, Peter T. Doran, Jeff S. Bowman, Britney E. Schmidt, Douglas H. Bartlett
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Whole genome sequence data of Mycolicibacterium parafortuitum Panama NTM 1 from a dairy farm in Panama
    Johanna Elizabeth Ku, Alejandro Llanes, Francisco Guizado-Batista, Emmanuel Hernández-Ricord, Amanda Ramírez-Casanova, Pave Mislov-Vallarino, Alexa Prescilla-Ledezma, Nicolas Torrales, Fermín Acosta, Amador Goodridge, Nora Ortiz de Moreno
    Data in Brief.2025; 59: 111368.     CrossRef
  • Genomic and functional characterization of the Pantoea ananatis nfd35 strain, a potential biocontrol agent of anthracnose disease in Trichosanthes kirilowii Maxim
    Ziang He, Feng Zhu, Shuzhen Sun, Ying Zhang, Rui Min, Huixiang Yang, Leiming Xu, Dengke Yin, Weifang Xu
    Physiological and Molecular Plant Pathology.2025; 138: 102683.     CrossRef
  • Growth physiology, genomics, and proteomics of Desulfurivibrio dismutans sp. nov., an obligately chemolithoautotrophic, sulfur disproportionating and ammonifying haloalkaliphile from soda lakes
    Dimitry Y. Sorokin, Alexander Y. Merkel, Rustam H. Ziganshin, Ilya V. Kublanov
    Frontiers in Microbiology.2025;[Epub]     CrossRef
  • Isolation of a putative sulfur comproportionating microorganism
    Heidi S. Aronson, Douglas E. LaRowe, Jennifer L. Macalady, Jan P. Amend
    Scientific Reports.2025;[Epub]     CrossRef
  • Phylogenomics as baseline for taxonomy description: Amphibiibacter pelophylacis gen. nov., sp. nov., a novel taxon of the family Sphaerotilaceae, class Betaproteobacteria, isolated from the skin microbiota of Pelophylax perezi from different populations
    Sara Costa, Diogo Neves Proença, Isabel Lopes, Paula V. Morais
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Harmony in diversity: Reorganizing the families within the order Pseudomonadales
    José David Flores-Félix, Paula García-Fraile, Zaki Saati-Santamaría
    Molecular Phylogenetics and Evolution.2025; 206: 108321.     CrossRef
  • A novel carotenoid-producing bacterium, Paenibacillus roseopurpureus sp. nov., isolated from Korean marine mud
    Chi Young Hwang, Eui-Sang Cho, Young-Do Nam, So-Lim Park, Seong-Il Lim, Myung-Ji Seo
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Novel thermophilic hydrolytic bacterium Rarispira pelagica gen. nov., sp. nov., reclassification of Spirochaeta thermophila as Winmispira thermophila gen. nov., comb. nov., and proposal of Winmispiraceae fam. nov. and Winmispirales ord. nov. in the class
    Olga A. Podosokorskaya, Anastasiia I. Maltseva, Alexander G. Elcheninov, Andrei A. Novikov, Kseniya S. Zayulina, Alexander Y. Merkel
    Systematic and Applied Microbiology.2025; 48(3): 126604.     CrossRef
  • Novosphingobium rhizovicinum sp. nov. and Novosphingobium kalidii sp. nov., two novel species isolated from rhizosphere soil and a root of halophyte Kalidium cuspidatum
    Rui-Qi Sun, Wen-Xia Dong, Jia-Hui Zeng, Hua-Mei Wei, Lian Xu, Ji-Quan Sun
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Probiotic Potential of Enterococcus lactis GL3 Strain Isolated from Honeybee (Apis mellifera L.) Larvae: Insights into Its Antimicrobial Activity Against Paenibacillus larvae
    Manhong Ye, Yinhong Jiang, Qiannan Han, Xiaoyuan Li, Chuang Meng, Chao Ji, Feng Ji, Bin Zhou
    Veterinary Sciences.2025; 12(2): 165.     CrossRef
  • Pelomonas baiyunensis sp. nov., Pelomonas candidula sp. nov., Pelomonas dachongensis sp. nov., Pelomonas lactea sp. nov., Pelomonas margarita sp. nov., Pelomonas nitida sp. nov., Pelomonas parva sp. nov. and Roseateles rivi sp. nov., isolated
    Huibin Lu, Guannan Li, Shan Yu
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Structure and mechanism of the Zorya anti-phage defence system
    Haidai Hu, Philipp F. Popp, Thomas C. D. Hughes, Aritz Roa-Eguiara, Nicole R. Rutbeek, Freddie J. O. Martin, Ivo Alexander Hendriks, Leighton J. Payne, Yumeng Yan, Dorentina Humolli, Victor Klein-Sousa, Inga Songailiene, Yong Wang, Michael Lund Nielsen, R
    Nature.2025; 639(8056): 1093.     CrossRef
  • Liberiplasma polymorphum gen. nov., sp. nov., a novel cell-wall-less free-living anaerobe, isolated from a terrestrial mud volcano, and proposal of Liberiplasmataceae fam. nov. and Liberiplasmatales ord. nov
    M.A. Khomyakova, A.Y. Merkel, A.A. Novikov, A.I. Slobodkin
    Systematic and Applied Microbiology.2025; 48(4): 126629.     CrossRef
  • Opacimonas immobilis sp. nov., a novel non-flagellated Alteromonadaceae species with the smallest genome isolated from the phycosphere of the diatom Actinocyclus curvatulus
    Xiaoyu Yang, Xuanru Lin, Runlin Cai, Hui Wang, Guanjing Cai
    Archives of Microbiology.2025;[Epub]     CrossRef
  • Draft genome sequence of Desulfobacterota strain M19, a mesophilic sulfur-disproportionating bacterium from a deep-sea hydrothermal vent on the Mid-Atlantic Ridge
    Marie Hemon, Lukáš Novák, Maxime Allioux, Léna Ailliot, Erwann Vince, Karine Alain, Simon Roux
    Microbiology Resource Announcements.2025;[Epub]     CrossRef
  • Identification and functional genomic analyses of Bartonella isolates from honey bees, and reassessment of the taxonomy of the genus Bartonella
    Juliana Botero, Nikolas Basler, Margo Cnockaert, Charlotte Peeters, Maria Schreiber, Manja Marz, Dirk C. de Graaf, Jelle Matthijnssens, Peter Vandamme
    Systematic and Applied Microbiology.2025; 48(4): 126625.     CrossRef
  • Pseudidiomarina salilacus sp. nov., a novel bacterium of the genus Pseudidiomarina isolated from sediment in Yuncheng Salt Lake
    Hui-Ying Yu, Jia-Tan Wei, Chuan-Xu Wang, Zhuo Wang, Ya-Jie Niu, Wen-Jun Li, Bao-Zhu Fang, Hao-Ran Guo, Xin Li
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Microbial dark matter spearheading the biogeochemical cycle in the Solar Lake of Taba, Egypt
    Rehab Z. Abdallah, Ali H.A. Elbehery, Amged Ouf, Rania Siam
    Current Research in Microbial Sciences.2025; 9: 100433.     CrossRef
  • Draft genome sequence of an Acinetobacter courvalinii isolate from Africa
    Ahmed Olowo-Okere, E. Skiebe, G. Wilharm, Simon Roux
    Microbiology Resource Announcements.2025;[Epub]     CrossRef
  • Phycobium rhodophyticola gen. nov., sp. nov. and Aliiphycobium algicola gen. nov., sp. nov., isolated from the phycosphere of marine red algae
    Jeong Min Kim, Woonhee Baek, Byeong Jun Choi, Hülya Bayburt, Jae Kyeong Lee, Sung Chul Lee, Che Ok Jeon
    Journal of Microbiology.2025; 63(6): e2503014.     CrossRef
  • Isolation and characterization of Fibrella aquatica sp. nov. from freshwater, Fibrella musci sp. nov. from moss on soil and Fibrella arboris sp. nov. from moss on a tree
    Chunghwan Baek, Inhyup Kim, Sunho Park, Haejin Woo, Hyunji Lee, Subin Yook, Seunghui Kwak, Jisu Kim, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Synergy between anammox bacteria and a novel glycogen-accumulating organism in domestic sewage treatment under carbon-poor conditions
    Hanbin Wang, Qiong Zhang, Jialin Li, You Wu, Xiyao Li, Liang Zhang, Yongzhen Peng
    Chemical Engineering Journal.2025; 520: 165931.     CrossRef
  • Aestuariibius violaceus sp. nov., isolated from a marine limpet Cellana toreuma
    Min Seo Lee, Mi-Jeong Park, Purena Son, Taekeun Rho, Kae Kyoung Kwon, Jin-Sook Park
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Reclassification of Moraxella boevrei, M. osloensis and M. atlantae, into the genus Faucicola, and proposal of a new genus within the family Moraxellaceae, Lwoffella lincolnii gen. nov., comb. nov., to accommodate the divergent species Moraxella lincolnii
    Imed Sbissi, Ikram Kammoun, Haifa El May, Tesnim Bouzidi, Faten Ghodhbane-Gtari, Maher Gtari
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Pyranulibacter aquaticus gen. nov., sp. nov., the first nitrate-reducing representative of the class Ignavibacteria from an Iturup well
    Olga A. Podosokorskaya, Alexander Y. Merkel, Andrei A. Novikov, Alexandra A. Klyukina, Alexander G. Elcheninov
    Systematic and Applied Microbiology.2025; 48(5): 126639.     CrossRef
  • Challenges in the Identification of Environmental Bacterial Isolates from a Pharmaceutical Industry Facility by 16S rRNA Gene Sequences
    Juliana Nunes Ramos, Luciana Veloso da Costa, Verônica Viana Vieira, Marcelo Luiz Lima Brandão
    DNA.2025; 5(3): 33.     CrossRef
  • Insights into the bacterial fraction of sediments from the South China Sea: physiological, chemotaxonomic, and genomic characterization of seven novel members of the Bacillaceae family
    Shu-Tong Ge, Hong Cheng, Ying-Wen Zhong, Jia-Ling Tang, Xin-Yue Huang, Bin Wei, Yue-Hong Wu, Chun-Sheng Wang
    Frontiers in Microbiology.2025;[Epub]     CrossRef
  • Robertkochia aurantiaca sp. nov., and Robertkochia flava sp. nov., two potential quinate- and catechol-degrading bacteria isolated from tidal-flat sediments
    Jaincy N. Jayan, Young-Mi Lee, Ye-ji You, Sathiyaraj Srinivasan, Sang-Seob Lee
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Machine learning models for delineating marine microbial taxa
    Stilianos Louca
    NAR Genomics and Bioinformatics.2025;[Epub]     CrossRef
  • Vibrio iocasae sp. nov., a bacterium isolated from the gill homogenate of bivalve lucinids Indoaustriella scarlatoi in intertidal mangrove sediments
    Jia Luo, Huan Zhang, Ziyun Ye, Fei Li, Zhaoshan Zhong, Jiacheng Wang, Minxiao Wang, Chaolun Li
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • PhyloScape: interactive and scalable visualization platform for phylogenetic trees
    Jiajia Wang, Bo Zhang, Linglu Zheng, Yan Chen, Chunyang Zhang, Guojiao Lin, Zhen Meng, Xuezhi Wang, Yuanchun Zhou
    BMC Bioinformatics.2025;[Epub]     CrossRef
  • Astrobacterium formosum gen. nov., sp. nov., a novel psychrotolerant rosette-forming bacterium from a laboratory psychrophilic EGSB bioreactor
    V.V. Potokina, S.N. Parshina, A.Y. Merkel, A.G. Elcheninov, A.V. Vishnyakova, A.N. Avtukh, N.A. Kostrikina, V.M. Tereshina, Y.V. Litti
    Systematic and Applied Microbiology.2025; 48(5): 126640.     CrossRef
  • Thermohahella caldifontis gen. nov., sp. nov., a thermo-halophilic bacterium isolated from a hot spring
    Dariimaa Ganbat, Sondor Ganbat, Bo Hyeon Park, Min Kyeong Kim, Jae-Yoon Sung, Won-Jae Chi, Seong-Bo Kim, Dong-Woo Lee, Sang-Jae Lee
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Genome-based reclassification of Blautia coccoides (Kaneuchi et al. 1976) Liu et al. 2008 as a later heterotypic synonym of Blautia producta (Prévot 1941) Liu et al. 2008
    Mehdi Fatahi-Bafghi
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Genomic characterization of Gillisia xinjiangensis sp. nov.: insights into nitrogen metabolism, stress adaptation, and application potential
    Hao-hao Wang, Chi Zhang, Ya-qin Chen, Yi-fan Guo, Li-jian Ding, Sheng-fa Zhang, Gai-jun Du, Wei-yan Zhang, Shan He
    Systematic and Applied Microbiology.2025; 48(5): 126645.     CrossRef
  • Duganella hordei sp. nov., Duganella caerulea sp. nov., and Duganella rhizosphaerae sp. nov., isolated from barley rhizosphere
    Katsumoto Kishiro, Nurettin Sahin, Daisuke Saisho, Naoki Yamaji, Jun Yamashita, Yuki Monden, Tomoyuki Nakagawa, Keiichi Mochida, Akio Tani
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Carnimonas bestiolae sp. nov. and Cernens ardua gen. nov., sp. nov.: new halotolerant bacteria from the invasive solitary bee Megachile sculpturalis
    Juliana Botero, Margo Cnockaert, Yakun Zhang, Charlotte Peeters, Peter Vandamme
    Systematic and Applied Microbiology.2025; 48(5): 126648.     CrossRef
  • Radicibacter daui, gen. nov., sp. nov., isolated from tomato rhizosphere soil and proposal of Radicibacteraceae fam. nov. and Radicibacterales ord. nov.
    Joo Hwan Kwon, Lemessa Etana Bultum, Seongmin Lee, Sang-Moo Lee, Minseo Choi, Seon-Woo Lee
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Pseudoduganella rhizocola sp. nov., Isolated from Rhizospheric Soil
    Shakiba S. Chegini, Jaincy N. Jayan, Yong Ho Kim, Sathiyaraj Srinivasan, Sang-Seob Lee
    Current Microbiology.2025;[Epub]     CrossRef
  • Alicycliphilus soli sp. nov., Isolated from a Plastic Film Greenhouse Soil and the Proposal for the Reclassification of Diaphorobacter limosus as Alicycliphilus limosus comb. nov.
    Xinyu Liu, Hailong Liang, Yingying Liu, Huijun Zhang, Hui Han, Bingyue Xin, Xiaomin Wu, Feng Li, Man Song, Long Zhang
    Current Microbiology.2025;[Epub]     CrossRef
  • Genome-resolved insights into the bacterial phylum WOR-3: hydrogenotrophic metabolism and unique carbon fixation via archaeal form III RuBisCO
    Jianxiong Zeng, Wenzhe Hu, Licao Chang, Zhengshuang Hua, Geng Wu, Yun Fang, Guowei Wang, Chunqiao Xiao, Jun Liu, Michaeline B. N. Albright
    mSystems.2025;[Epub]     CrossRef
  • Multiple-omics analysis of three novel haloalkaliphilic species of Kocuria revealed that the phenolic acid-degrading abilities are ubiquitous in the genus
    Lian Xu, Rui-Qi Sun, Jia-Hui Zeng, Hua-Mei Wei, Biao Shen, Ji-Quan Sun
    Frontiers in Microbiology.2025;[Epub]     CrossRef
  • Isolation of diverse Undibacterium-related strains from alpine lakes and re-examining the taxonomic status of this genus
    Hui-Bin Lu, Ling-Yang Kong, Li Chen, Guang-Jie Chen, Jian-Jun Wang
    Systematic and Applied Microbiology.2025; 48(6): 126661.     CrossRef
  • Metagenomic binning reveals community and functional characteristics of sulfur- and methane-oxidizing bacteria in cold seep sponge ground
    Yan Wang, Lin Gong, Dong Dong, Xinzheng Li
    Environmental Microbiome.2025;[Epub]     CrossRef
  • Comprehensive genomic analysis of Sinorhizobium meliloti isolates associated with fenugreek (Trigonella foenum-graecum Linn.) from diverse agroclimatic regions of India
    Mitesh Khairnar, Saleh S. Alhewairini, Swapnil Chandrakant Kajale, Vagish Dwibedi, Jayanthi Barasarathi, Andrea Mastinu, Riyaz Sayyed
    Chemical and Biological Technologies in Agriculture.2025;[Epub]     CrossRef
  • Description of Fulverythrobacter ferritrahens gen. nov., sp. nov., a Siderophore-Producing Bacterium Isolated from Poultry Manure Compost and Reclassification of Caenibius fulvus and Altererythrobacter segetis as Fulverythrobacter fulvus Comb. nov. and Cr
    Shih-Yao Lin, Asif Hameed, Tzu-Yu Lin, Chiu-Chung Young
    Current Microbiology.2025;[Epub]     CrossRef
  • Reclassification of Pseudomonas boreopolis Gray and Thornton 1928 (Approved Lists 1980) as Xanthomonas boreopolis comb. nov. and Pseudomonas carboxydohydrogena (ex Sanjieva and Zavarzin 1971) Meyer et al. 1980 as Afipia carboxydohydrogena comb. nov. based
    Mehdi Fatahi-Bafghi
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Description of Neorhizobium tunisiense sp. nov., reclassification of Neorhizobium xiangyangii as Pseudorhizobium xiangyangii comb. nov. and proposal of Terrirhizobium terrae gen. nov., comb. nov. to accommodate the divergent species Aliirhizobium terrae
    Imed Sbissi, Dhouha Boussoufa, Ikram Kammoun, Rihab Hamra, Hana Dali, Mohamed Tarhouni, Maher Gtari
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Taxonomic and metabolic diversity of microbial communities in a thermal water stream in Uzbekistan and proposal of two new classes of uncultivated bacteria, Desulfocorpusculia class. nov. and Tepidihabitantia class. nov., named following the rules of SeqC
    Galina B. Slobodkina, Alexander Y. Merkel, Kseniya V. Kondrasheva, Alexandra R. Stroeva, Elizaveta A. Bonch-Osmolovskaya, Kahramon D. Davranov, Alexander I. Slobodkin
    Systematic and Applied Microbiology.2025; 48(5): 126650.     CrossRef
  • Qipengyuania marincola sp. nov., Qipengyuania flavescens sp. nov. and Pseudoblastomonas aquimaris sp. nov., three novel members of the family Erythrobacteraceae isolated from seawater
    Tian-Pu Li, Dao-Feng Zhang, Zi-Yue Fu, Meng-Han Huang
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • New Isolates of Betachloroviruses Shed Light on the Diversity and Biological Complexity of an Unexplored Group of Giant Algal Viruses
    Júlia W. Souza, Lethícia R. Henriques, Roger M. Carlson, Bruna B. F. Botelho, João Victor R. P. Carvalho, João Pedro N. Santos, Eric R. G. R. Aguiar, Irina V. Agarkova, James L. Van Etten, David D. Dunigan, Rodrigo A. L. Rodrigues
    Viruses.2025; 17(8): 1096.     CrossRef
  • Adaptation strategies of iron-oxidizing bacteria Gallionella and Zetaproteobacteria crossing the marine–freshwater barrier
    Petra Hribovšek, Emily Olesin Denny, Achim Mall, Håkon Dahle, Ida Helene Steen, Runar Stokke, Christa M. Schleper
    mBio.2025;[Epub]     CrossRef
  • Genomic diversity and adaptation in Arctic marine bacteria
    Michael C. Sadler, Matthias Wietz, Sayaka Mino, Robert M. Morris, Stephen J. Giovannoni
    mBio.2025;[Epub]     CrossRef
  • Microbial diversity and functional potential of the Halobates melleus (Heteroptera: Gerridae) microbiome from the Red Sea coastline
    Juan David Escobar-Prieto, Marc W. Van Goethem, Bob Vernooij, Chakkiath Paul Antony, Lanna Cheng, Himanshu Mishra, Ramona Marasco, Daniele Daffonchio
    Environmental Microbiome.2025;[Epub]     CrossRef
  • Taxonomy for clinicians – recent changes in names of anaerobic species with pathogenic or probiotic properties
    Lyudmila Boyanova, Raina Gergova, Rumyana Markovska
    Anaerobe.2025; : 103002.     CrossRef
  • Expansion and revision of the genus Xanthobacter and proposal of Roseixanthobacter gen. nov.
    Maximillian P. M. Soltysiak, Amogh P. Jalihal, Caroline E. Christophersen, Audrey L. H. Ory, Andrew D. Lee, Jessica Boulton, Michael Springer
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Ovoidimarina sediminis gen. nov., sp. nov., a novel member of the Roseobacteraceae isolated from tidal flat sediment
    Akila Kathiresan, Jaincy N. Jayan, Hee-Su Kim, Hyung-Seop Kim, Cong Li, Ke Dong, Sathiyaraj Srinivasan, Sang-Seob Lee
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Whole Genome Sequencing-Based Taxonomic Identification of Dulcitol-Positive Cronobacter dublinensis subsp. beijingensis subsp. nov. and Cronobacter dublinensis subsp. infanticibi subsp. nov. from Infant Cereals in China
    Xin Gan, Menghan Li, Fengqin Li, Jianyun Zhao, Hui Li, Séamus Fanning, Yinping Dong, Li Bai
    Current Microbiology.2025;[Epub]     CrossRef
  • Characterization of Sulfitobacter sediminivivens sp. nov., A Novel Halotolerant, Nitrogen-Assimilating Bacterium from Tidal Flat Sediment
    Akila Kathiresan, Hee-Yeon Park, Hyung-Seop Kim, Cong Li, Ke Dong, Sathiyaraj Srinivasan, Sang-Seob Lee
    Current Microbiology.2025;[Epub]     CrossRef
  • LINgroups as a Robust Principled Approach to Compare and Integrate Multiple Bacterial Taxonomies
    Reza Mazloom, N. Tessa Pierce-Ward, Parul Sharma, Leighton Pritchard, C. Titus Brown, Boris A. Vinatzer, Lenwood S. Heath
    IEEE/ACM Transactions on Computational Biology and Bioinformatics.2024; 21(6): 2304.     CrossRef
  • Microbulbifer spongiae sp. nov., isolated from marine sponge Diacarnus erythraeanus
    Nabila Ishaq, Mimi Zhang, Luyao Gao, Micha Ilan, Zhiyong Li
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Genome‐based taxonomic analysis of the genus Pseudoalteromonas reveals heterotypic synonyms
    Patrick Videau, Maximillian D. Shlafstein, David K. Oline, Scott A. Givan, Linda Fleet Chapman, Wendy K. Strangman, Richard L. Hahnke, Jimmy H. Saw, Blake Ushijima
    Environmental Microbiology.2024;[Epub]     CrossRef
  • Arcicella gelida sp. nov. and Arcicella lustrica sp. nov., isolated from streams in China and re-examining the taxonomic status of all the genera within the families Spirosomataceae and Cytophagaceae
    Huibin Lu, Li Chen, Linpei Huang
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Sustained bacterial N2O reduction at acidic pH
    Guang He, Gao Chen, Yongchao Xie, Cynthia M. Swift, Diana Ramirez, Gyuhyon Cha, Konstantinos T. Konstantinidis, Mark Radosevich, Frank E. Löffler
    Nature Communications.2024;[Epub]     CrossRef
  • Paenalcaligenes faecalis sp. nov., a novel species of the family Alcaligenaceae isolated from chicken faeces
    Yiran Zhang, John Quensen, Bo Chen, Hailong Li, James Tiedje, Wei Sun, Xun Qian
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Rhodoferax lithotrophicus sp. nov., a neutrophilic iron-oxidizing and -reducing bacterium isolated from iron-rich freshwater sediments
    Shingo Kato, Takashi Itoh, Takao Iino, Mitsuo Sakamoto, Moriya Ohkuma
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Paenibacillus suaedae sp. nov. and Paenibacillus violae sp. nov., isolated from the roots of Suaeda japonica Makino and Viola mandshurica W. Becker with plant growth-promoting potential
    Inhyup Kim, Sunho Park, Yonghee Jung, Haejin Woo, Hyunji Lee, Subin Yook, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Genetic potential for aerobic respiration and denitrification in globally distributed respiratory endosymbionts
    Daan R. Speth, Linus M. Zeller, Jon S. Graf, Will A. Overholt, Kirsten Küsel, Jana Milucka
    Nature Communications.2024;[Epub]     CrossRef
  • Description of the first marine-isolated member of the under-represented phylum Gemmatimonadota , and the environmental distribution and ecogenomics of Gaopeijiales ord. nov.
    Yu-Qi Ye, Meng-Qi Ye, Xin-Yue Zhang, You-Zhi Huang, Zi-Yang Zhou, Yan-Jun Feng, Zong-Jun Du, Thulani P. Makhalanyane
    mSystems.2024;[Epub]     CrossRef
  • Ideonella margarita sp. nov., Ideonella lacteola sp. nov., Pseudaquabacterium inlustre sp. nov. and Pseudaquabacterium rugosum sp. nov., isolated from streams in China and re-examining the taxonomic status of all the genera within the family
    Huibin Lu, Li Chen
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Comparative genomics of obligate predatory bacteria belonging to phylum Bdellovibrionota highlights distribution and predicted functions of lineage-specific protein families
    Sidney C. Davis, Joseph Cerra, Laura E. Williams, Barbara J. Campbell
    mSphere.2024;[Epub]     CrossRef
  • Isolation and characterization of cellulose-mineralizing haloalkaliphilic bacteria from Siberian soda lakes
    Dimitry Y. Sorokin, Alexander Y. Merkel, Tatjana V. Khizhniak
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • The genome of a new Halorubrum distributum strain ICIS4 isolated from the culture of a microalga Dunaliella salina
    Е. А. Selivanova, А. S. Balkin, Yu. А. Khlopko, V. Ya. Kataev, А. О. Plotnikov
    Microbiology.2024; 93(4): 444.     CrossRef
  • Lacrimispora brassicae sp. nov. isolated from fermented cabbage, and proposal of Clostridium indicum Gundawar et al. 2019 and Clostridium methoxybenzovorans Mechichi et al. 1999 as heterotypic synonyms of Lacrimispora amygdalina (Parshina et
    Hisami Kobayashi, Yasuhiro Tanizawa, Mitsuo Sakamoto, Moriya Ohkuma, Masanori Tohno
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Clostridium lapidicellarium sp. nov. and Clostridium moutaii sp. nov., two species isolated from fermentation cellar-producing sauce-flavour Chinese baijiu
    Fan Yang, Hui Wang, Liang-Qiang Chen, Nan Zhou, Jian-Jun Lu, Xiu-Xin Pu, Bo Wan, Li Wang, Shuang-Jiang Liu
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Ultraconserved bacteriophage genome sequence identified in 1300-year-old human palaeofaeces
    Piotr Rozwalak, Jakub Barylski, Yasas Wijesekara, Bas E. Dutilh, Andrzej Zielezinski
    Nature Communications.2024;[Epub]     CrossRef
  • Description of Streptococcus dentalis sp. nov., Streptococcus gingivalis sp. nov., and Streptococcus lingualis sp. nov., Isolated from Human Oral Cavities
    Beom-Jin Goo, Young-Sik Choi, Do-Hun Gim, Su-Won Jeong, Jee-Won Choi, Hojun Sung, Jae-Yun Lee, Jin-Woo Bae
    Journal of Microbiology.2024; 62(11): 973.     CrossRef
  • Hohaiivirga grylli gen. nov., sp. nov., a New Member of the Family Methylobacteriaceae, Isolated from Cricket (Gryllus chinensis)
    Hong-Chuan Wang, Meng-Han Huang, Dan-Yuan Guo, Wei He, Lu Wang, Zi-Yue Fu, Wen-Jun Li, Ai Hua Zhang, Dao-Feng Zhang
    Current Microbiology.2024;[Epub]     CrossRef
  • Cellulomonas alba sp. nov. and Cellulomonas edaphi sp. nov., isolated from wetland soils
    Sunho Park, Inhyup Kim, Geeta Chhetri, Yonghee Jung, Haejin Woo, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Age, metabolisms, and potential origin of dominant anammox bacteria in the global oxygen-deficient zones
    Rui Zhao, Irene H Zhang, Amal Jayakumar, Bess B Ward, Andrew R Babbin
    ISME Communications.2024;[Epub]     CrossRef
  • Limosilactobacillus allomucosae sp. nov., a novel species isolated from wild boar faecal samples as a potential probiotic for domestic pigs
    Binbin Chen, Shaktheeshwari Silvaraju, Sharifah Nora Ahmad Almunawar, Yu Chyuan Heng, Jolie Kar Yi Lee, Sandra Kittelmann
    Systematic and Applied Microbiology.2024; 47(6): 126556.     CrossRef
  • Evaluation of sequence-based tools to gather more insight into the positioning of rhizogenic agrobacteria within the Agrobacterium tumefaciens species complex
    Pablo Roberto Vargas Ribera, Nuri Kim, Marc Venbrux, Sergio Álvarez-Pérez, Hans Rediers, Muhammad Anwar
    PLOS ONE.2024; 19(11): e0302954.     CrossRef
  • Chitiniphilus purpureus sp. nov., a novel chitin-degrading bacterium isolated from crawfish pond sediment
    Kaiyang Li, Xiong Luo, Rongrong Fan, Zhuoran Ding, Shixue Zheng, Zhengjun Chen
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Thalassotalea aquiviva sp. nov., and Thalassotalea maritima sp. nov., Isolated from Seawater of the Coast in South Korea
    Jina Lee, Seung-Hui Song, Kira Moon, Nakyeong Lee, Sangdon Ryu, Hye Seon Song, Sung Moon Lee, Yun Ji Kim, Se Won Chun, Kyung-Min Choi, Aslan Hwanhwi Lee
    Journal of Microbiology.2024; 62(12): 1099.     CrossRef
  • Cold adaptation and response genes of Antarctic Cryobacterium sp. SO2 from the Fildes Peninsula, King George Island
    Chui Peng Teoh, Marcelo González‑Aravena, Paris Lavin, Clemente Michael Vui Ling Wong
    Polar Biology.2024; 47(2): 135.     CrossRef
  • Xiashengella succiniciproducens gen. nov., sp. nov., a succinate-producing bacterium isolated from an anaerobic digestion tank in the family Marinilabiliaceae of the order Bacteroidales
    Hao-Jie Huang, Xi Zhang, Xin-Wei Sun, Biao Chen, Xiu-Tong Li, Nan Zhou, Rashidin Abdugheni, Qiu-Yin Cheng, Tie-Jun Zhang, Yao Liu, Yong Jiang, Ye Deng, Shuang-Jiang Liu, Cheng-Ying Jiang
    Archives of Microbiology.2024;[Epub]     CrossRef
  • Paracoccus spongiarum sp. nov., isolated from the marine sponge, Phakellia elegans
    Soo-Bin Kim, Kyung Hyun Kim, Jin-Sook Park
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Sorlinia euscelidii gen. nov., sp. nov., a novel acetic acid bacterium isolated from the leafhopper Euscelidius variegatus (Hemiptera: Cicadellidae)
    Ramona Marasco, Grégoire Michoud, Kholoud A. Seferji, Elena Gonella, Elisa Garuglieri, Eleonora Rolli, Alberto Alma, Francesca Mapelli, Sara Borin, Daniele Daffonchio, Elena Crotti
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Comparative genomics of the genus Halioglobus reveals the genetic basis for the reclassification of Halioglobus pacificus as Parahalioglobus pacificus gen. nov. comb. nov
    Jake Adolf V. Montecillo
    International Microbiology.2024; 27(6): 1831.     CrossRef
  • Neisseria leonii sp. nov., isolated from the nose, lung, and liver of rabbits
    Martin Boutroux, Sandrine Favre-Rochex, Olivier Gorgette, Gérald Touak, Estelle Mühle, Christiane Bouchier, Olivier Chesneau, Frédéric J. Veyrier, Dominique Clermont, Praveen Rahi
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Pedobacter rhodius sp. nov. and Pedobacter punctiformis sp. nov., isolated from soil
    Haejin Woo, Geeta Chhetri, Inhyup Kim, Yoonseop So, Sunho Park, Yonghee Jung, Taegun Seo
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Taxonomic characterization of Sphaerotilus microaerophilus sp. nov., a sheath-forming microaerophilic bacterium of activated sludge origin
    Shiori Narihara, Shun Chida, Naoki Matsunaga, Ryosuke Akimoto, Mizuki Akimoto, Aoi Hagio, Tomomi Mori, Tadashi Nittami, Michio Sato, Sehui Mun, Hyeonjin Kang, Ji Hwan Back, Minoru Takeda
    Archives of Microbiology.2024;[Epub]     CrossRef
  • Sphingomonas rustica sp. nov. and Sphingomonas agrestis sp. nov., novel carotenoid-producing bacterial species isolated from farm soil
    Hyunji Lee, Inhyup Kim, Sunho Park, Haejin Woo, Subin Yook, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Hidden genomic diversity drives niche partitioning in a cosmopolitan eukaryotic picophytoplankton
    Yangbing Xu, Shara K K Leung, Taylor M W Li, Charmaine C M Yung
    The ISME Journal.2024;[Epub]     CrossRef
  • Flagellimonas baculiformis sp. nov. and Flagellimonas crocea sp. nov., isolated from surface seawater of the Pacific Ocean
    Ming-lei Wang, Ge-Yi Fu, Xue-Wei Xu
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Two Novel Bacterial Species, Rhodanobacter lycopersici sp. nov. and Rhodanobacter geophilus sp. nov., Isolated from the Rhizosphere of Solanum lycopersicum with Plant Growth-Promoting Traits
    Haejin Woo, Inhyup Kim, Geeta Chhetri, Sunho Park, Hyunji Lee, Subin Yook, Taegun Seo
    Microorganisms.2024; 12(11): 2227.     CrossRef
  • Preliminary comparative genomics analysis among Corynebacterium kroppenstedtii complex necessitates a reassessment of precise species associated with mastitis
    Ying Huang, Ming-Hui Song, Shun-Guang Li, Hong- Yu Shen, Ping-Hua Qu, Dao-Feng Zhang
    Journal of Applied Microbiology.2024;[Epub]     CrossRef
  • Salmonirosea aquatica gen. nov., sp. nov., a Novel Genus within the Family Spirosomaceae, Was Isolated from Brackish Water in the Republic of Korea
    Kiwoon Baek, Sumin Jang, Jaeduk Goh, Ahyoung Choi
    Microorganisms.2024; 12(8): 1671.     CrossRef
  • Phylogenomic analyses of the genus Actinoplanes: description of four novel genera
    Ivan Roman, Victor Fedorenko, Oleksandr Gromyko
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • A hotspot of diversity: novel Shewanella species isolated from Baltic Sea sediments delineate a sympatric species complex
    Alberto J. Martín-Rodríguez, Víctor Fernández-Juárez, Valerie D. Valeriano, Indiwari Mihindukulasooriya, Livia Ceresnova, Enrique Joffré, Susanne Jensie-Markopoulos, Edward R. B. Moore, Åsa Sjöling
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • An evolutionary view of the Fusarium core genome
    Daniel A. Gomez-Chavarria, Alvaro L. Rua-Giraldo, Juan F. Alzate
    BMC Genomics.2024;[Epub]     CrossRef
  • Complete genome sequence of a winter season Vibrio facilitates discovery of a novel subclade of cold-adapted species in the albus clade
    Paul D. Kastner, Stephen E. Noell, David A. Essig
    Microbial Genomics .2024;[Epub]     CrossRef
  • Advancements in prokaryotic systematics and the role of Bergey's International Society for Microbial Systematicsin addressing challenges in the meta-data era
    Jian-Yu Jiao, Rashidin Abdugheni, Dao-Feng Zhang, Iftikhar Ahmed, Mukhtiar Ali, Maria Chuvochina, Svetlana N Dedysh, Xiuzhu Dong, Markus Göker, Brian P Hedlund, Philip Hugenholtz, Kamlesh Jangid, Shuang-Jiang Liu, Edward R B Moore, Manik Prabhu Narsing Ra
    National Science Review.2024;[Epub]     CrossRef
  • Klebsiella Pneumoniae – Taxonomy, Occurrence, Identification, Virulence Factors and Pathogenicity
    Dorota Ochońska, Monika Brzychczy-Włoch
    Advancements of Microbiology.2024; 63(3): 157.     CrossRef
  • Characterization of a Novel Species of Legionella Isolated from a Healthcare Facility: Legionella resiliens sp. nov
    Sandra Cristino, Maria Rosaria Pascale, Federica Marino, Carlo Derelitto, Silvano Salaris, Massimiliano Orsini, Stefano Squarzoni, Antonella Grottola, Luna Girolamini
    Pathogens.2024; 13(3): 250.     CrossRef
  • Genome-based classification of Halobellus rubicundus sp. nov., a novel extremely halophilic archaeon isolated from a Korean solar saltern
    Chi Young Hwang, Eui-Sang Cho, In-Tae Cha, Ki-Eun Lee, Eun-Young Lee, Myung-Ji Seo
    Extremophiles.2024;[Epub]     CrossRef
  • Reclassification of Aestuariicella albida as Pseudomaricurvus albidus comb. nov. and Aestuariicella hydrocarbonica as Pseudomaricurvus hydrocarbonicus comb. nov. Based on Comparative Genomics and Molecular Synapomorphies
    Jake Adolf V. Montecillo, Merell P. Billacura, Maria Distressa G. Billacura
    Current Microbiology.2024;[Epub]     CrossRef
  • Schauerella fraxinea gen. nov., sp. nov., a bacterial species that colonises ash trees tolerant to dieback caused by Hymenoscyphus fraxineus
    Undine Behrendt, Valentin Burghard, Sonja Wende, Kristina Ulrich, Jacqueline Wolf, Meina Neumann-Schaal, Andreas Ulrich
    Systematic and Applied Microbiology.2024; 47(4): 126516.     CrossRef
  • Roseateles subflavus sp. nov. and Roseateles aquae sp. nov., isolated from artificial pond water and Roseateles violae sp. nov., isolated from a Viola mandshurica root
    Haejin Woo, Geeta Chhetri, Inhyup Kim, Yoonseop So, Sunho Park, Yonghee Jung, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • New Drinking Water Genome Catalog Identifies a Globally Distributed Bacterial Genus Adapted to Disinfected Drinking Water Systems
    Ashwin S Sudarshan, Zihan Dai, Marco Gabrielli, Solize Oosthuizen-Vosloo, Konstantinos T. Konstantinidis, Ameet J Pinto
    Environmental Science & Technology.2024; 58(37): 16475.     CrossRef
  • Phylogenomic evaluation of Mangrovimicrobium sediminis gen. nov. sp. nov., the first nitrogen fixing member of the family Halieaceae adapted to mangrove habitat and reclassification of Halioglobus pacificus to Pseudohaliglobus pacificus comb. nov.
    Pravin Kumar, Ashish Verma, Pooja Yadav, Joyasree Das, Lalit Kumar, Srinivasan Krishnamurthi
    Science of The Total Environment.2024; 933: 172995.     CrossRef
  • Draft Genome Sequences of Three Janthinobacterium lividum Strains Producing Violacein
    Yu Jeong Lee, Jae-Cheol Lee, Kira Moon, Aslan Hwanhwi Lee, Byung Hee Chun
    Microbiology and Biotechnology Letters.2024; 52(2): 215.     CrossRef
  • Eubacterium album sp. nov., a butyrate-producing bacterium isolated from faeces of a healthy human
    Feng-Lan Liu, Rashidin Abdugheni, Cong-Guo Ran, Nan Zhou, Shuang-Jiang Liu
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Description of Asgardarchaeum abyssi gen. nov. spec. nov., a novel species within the class Asgardarchaeia and phylum Asgardarchaeota in accordance with the SeqCode
    Daniel Tamarit, Stephan Köstlbacher, Kathryn E. Appler, Kassiani Panagiotou, Valerie De Anda, Christian Rinke, Brett J. Baker, Thijs J.G. Ettema
    Systematic and Applied Microbiology.2024; 47(4): 126525.     CrossRef
  • Alterisphingorhabdus coralli gen. nov. sp. nov., a novel aerobic anoxygenic phototrophic bacteria isolated from reef-building coral
    Chang Yan, Kun Zhang, Songbiao Shi, Lili Jian, Beilin Chen, Syed Raziuddin Quadri, Xinpeng Tian
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Update on the proposed minimal standards for the use of genome data for the taxonomy of prokaryotes
    Raúl Riesco, Martha E. Trujillo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Polymorphospora lycopeni sp. nov., a lycopene-producing actinomycetes isolated from lakeside soil sample of Baiyangdian
    Jiashan Liu, Shilong Li, Xiaomin Duan, Hongmei Li, Xiumin Zhang
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Reclassification of Butyrivibrio crossotus Moore et al. 1976 (Approved Lists 1980) into a novel genus as Eshraghiella crossota gen. nov., comb. nov.
    Mehdi Fatahi-Bafghi
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Analysis of the genetic diversity in RNA-directed RNA polymerase sequences: implications for an automated RNA virus classification system
    Zhongshuai Tian, Tao Hu, Edward C Holmes, Jingkai Ji, Weifeng Shi
    Virus Evolution.2024;[Epub]     CrossRef
  • Fodinisporobacter ferrooxydans gen. nov., sp. nov.—A Spore-Forming Ferrous-Oxidizing Bacterium Isolated from a Polymetallic Mine
    Zhen Jiang, Xiutong Li, Zonglin Liang, Zebao Tan, Nan Zhou, Ying Liu, Zhenghua Liu, Huaqun Yin, Kun Luo, Supawadee Ingsriswang, Shuangjiang Liu, Chengying Jiang
    Microorganisms.2024; 12(5): 853.     CrossRef
  • An abundant bacterial phylum with nitrite-oxidizing potential in oligotrophic marine sediments
    Rui Zhao, Steffen L. Jørgensen, Andrew R. Babbin
    Communications Biology.2024;[Epub]     CrossRef
  • Genomic and phenotypic characterization of 26 novel marine bacterial strains with relevant biogeochemical roles and widespread presence across the global ocean
    Xavier Rey-Velasco, Teresa Lucena, Ana Belda, Josep M. Gasol, Olga Sánchez, David R. Arahal, María J. Pujalte
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • Ignisphaera cupida sp. nov., a hyperthermophilic hydrolytic archaeon from a hot spring of Uzon (Kamchatka), and emended description of the genus Ignisphaera
    Olga A. Podosokorskaya, Alexander G. Elcheninov, Alexandra A. Klyukina, Alexander Y. Merkel
    Systematic and Applied Microbiology.2024; 47(5): 126541.     CrossRef
  • Genomic diversity in Paenibacillus polymyxa: unveiling distinct species groups and functional variability
    Adrian Wallner, Livio Antonielli, Ouiza Mesguida, Patrice Rey, Stéphane Compant
    BMC Genomics.2024;[Epub]     CrossRef
  • Comparative genomic analyses of Cutibacterium granulosum provide insights into genomic diversity
    Peishan Chen, Shaojing Wang, Hongyan Li, Xiaoye Qi, Yuanyuan Hou, Ting Ma
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • A new insight on the xyl upper operon revealed through genomic investigation strategy
    Xuefeng Tian, Shaojing Wang, Peishan Chen, Mingbo Yang, Zhaoying Su, Yue Ming, Guoqiang Li, Ting Ma
    International Biodeterioration & Biodegradation.2024; 189: 105748.     CrossRef
  • Genome-based reclassification of Spiroplasma atrichopogonis Koerber et al. 2005 as a later heterotypic synonym of Spiroplasma mirum Tully et al. 1982
    Vatsal Bhargava, Darshana Lahon, Sonal Gupta, Jasvinder Kaur, Pushp Lata
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Lysinibacillus piscis sp. nov. isolated from the gut of mottled spinefoot Siganus fuscescens
    Hiyu Kanbe, Yuki Sano, Kazumori Mise, Shusei Kanie, Natsumi Ushijima, Keisuke Kawano, Minoru Kihara, Hideomi Itoh
    Archives of Microbiology.2024;[Epub]     CrossRef
  • Specific amino acid changes correlate with pathogenic flavobacteria
    Vincent Gélinas, Valérie E. Paquet, Maude F. Paquet, Steve J. Charette, Antony T. Vincent
    Genome.2024; 67(10): 368.     CrossRef
  • Aurantiacibacter flavus sp. nov. and Aurantiacibacter gilvus sp. nov., isolated from the mudflat of Suaeda japonica colonies
    Sunho Park, Inhyup Kim, Haejin Woo, Hyunji Lee, Subin Yook, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Splendidivirga corallicola gen. nov., sp. nov. and Agaribacillus aureus gen. nov., sp. nov., two bacteria isolated from coral Porites lutea, and proposal of Splendidivirgaceae fam. nov.
    Jin Li, Jixin Luo, Mi Li, Chenyan Wang, Siyu Hu, Kun Lu, Guanghua Wang
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • The Genome of a New Halorubrum distributum Strain ICIS4 Isolated from the Culture of a Microalga Dunaliella salina
    E. A. Selivanova, A. S. Balkin, Yu. A. Khlopko, V. Ya. Kataev, A. O. Plotnikov
    Microbiology.2024; 93(4): 482.     CrossRef
  • Peteryoungia algae sp. nov. isolated from seaweeds of Gouqi Island, China, and its unique genetic features among Peteryoungia strains
    Jun Yin, Min He, Xiao-Xiao Liu, Chang-Bin Ren, Hou-Hong Liu, Hai Luo, Gen Chen, Ze-Fei Wang, Sanjit Chandra Debnath, Pin-Mei Wang, Hai-Xin Chen, Dao-Qiong Zheng
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Methylomonas rivi sp. nov., Methylomonas rosea sp. nov., Methylomonas aurea sp. nov. and Methylomonas subterranea sp. nov., type I methane-oxidizing bacteria isolated from a freshwater creek and the deep terrestrial subsurface
    Christopher A. Abin, Christopher T. Garner, Krithivasan Sankaranarayanan, Reid A. Sindelar, Kyrah F. Kotary, Rosa M. Garner, Samantha C. Barclay, Haiyuan Cai, Paul A. Lawson, Lee R. Krumholz
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Phylogenomic discernments into Anaerolineaceae thermal adaptations and the proposal of a candidate genus Mesolinea
    Katherine Bedoya-Urrego, Juan F. Alzate
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • Unraveling the genomic secrets of Tritonibacter mobilis AK171: a plant growth-promoting bacterium isolated from Avicennia marina
    Amal Khalaf Alghamdi, Sabiha Parween, Heribert Hirt, Maged M. Saad
    BMC Genomics.2024;[Epub]     CrossRef
  • Ochrobactrum chromiisoli sp. nov., Isolated from Chromium-Contaminated Soil
    Yi Yang, Zhe Xu, Li Yang, Meng-yao Hu, Guang-yang Jiang, Jia Chen, Yi-chen Yang, Yongqiang Tian
    Current Microbiology.2024;[Epub]     CrossRef
  • Spartinivicinus poritis sp. nov., a red pigment-producing bacterium isolated from a scleractinian coral Porites lutea
    Sumbal Sajid, Guoqiang Zhang, Zongyao Zhang, Yishan Lu, Lianguo Chen, Lin Cai
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Tardiphaga alba sp. nov., a heavy-metal-tolerant bacterium isolated from garden soil
    Zhihua Bao, Chaojun Wang, Jiahui Cao, Tingting Zhang, Yong Guo, Yoshinori Sato, Tomoyasu Nishizawa, Hiroyuki Ohta
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Novel order-level lineage of ammonia-oxidizing archaea widespread in marine and terrestrial environments
    Yue Zheng, Baozhan Wang, Ping Gao, Yiyan Yang, Bu Xu, Xiaoquan Su, Daliang Ning, Qing Tao, Qian Li, Feng Zhao, Dazhi Wang, Yao Zhang, Meng Li, Mari-K H Winkler, Anitra E Ingalls, Jizhong Zhou, Chuanlun Zhang, David A Stahl, Jiandong Jiang, Willm Martens-H
    The ISME Journal.2024;[Epub]     CrossRef
  • Refining the taxonomy of the order Hyphomicrobiales (Rhizobiales) based on whole genome comparisons of over 130 type strains
    George C. diCenzo, Yuqi Yang, J. Peter W. Young, Nemanja Kuzmanović
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Luteimonas flava sp. nov. and Aquilutibacter rugosus gen. nov., sp. nov., isolated from freshwater environments in China and re-examining the taxonomic status of genera Luteimonas and Lysobacter
    Huibin Lu, Li Chen, Yujing Wang, Peng Xing, Qinglong Wu
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Novel taxonomic and functional diversity of eight bacteria from the upper digestive tract of chicken
    Bibiana Rios-Galicia, Johan S. Sáenz, Timur Yergaliyev, Christoph Roth, Amélia Camarinha-Silva, Jana Seifert
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Parendozoicomonas callyspongiae sp. nov. Isolated from a Marine Sponge, Callyspongia elongate, and Reclassification of Sansalvadorimonas verongulae as Parendozoicomonas verongulae comb. nov.
    Soo-Bin Kim, Kyung Hyun Kim, Jin-Sook Park
    Current Microbiology.2024;[Epub]     CrossRef
  • Novel phage infecting the Roseobacter CHUG lineage reveals a diverse and globally distributed phage family
    Zuqing Wu, Luyuan Guo, Ying Wu, Mingyu Yang, Sen Du, Jiabing Shao, Zefeng Zhang, Yanlin Zhao, Michael J. Imperiale
    mSphere.2024;[Epub]     CrossRef
  • Biochip-Based Identification of Mycobacterial Species in Russia
    Danila Zimenkov, Vyacheslav Zhuravlev, Anastasia Ushtanit, Marina Filippova, Uliana Semenova, Natalia Solovieva, Maria Sviridenko, Anastasia Khakhalina, Svetlana Safonova, Marina Makarova, Elizaveta Gordeeva, Elena Guselnikova, Yakov Schwartz, Natalia Sta
    International Journal of Molecular Sciences.2024; 25(23): 13200.     CrossRef
  • Leptothrix ochracea genomes reveal potential for mixotrophic growth on Fe(II) and organic carbon
    Gracee K. Tothero, Rene L. Hoover, Ibrahim F. Farag, Daniel I. Kaplan, Pamela Weisenhorn, David Emerson, Clara S. Chan, Arpita Bose
    Applied and Environmental Microbiology.2024;[Epub]     CrossRef
  • Svornostia abyssi gen. nov., sp. nov. isolated from the world’s deepest silver–uranium mine currently devoted to the extraction of radon-saturated water
    Gabriela Kapinusova, Jachym Suman, Michal Strejcek, Petr Pajer, Tomas Cajthaml, Pavel Ulbrich, Meina Neumann-Schaal, Ondrej Uhlik
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Genomic analysis of the class Phycisphaerae reveals a versatile group of complex carbon-degrading bacteria
    Wouter B. Lenferink, Theo A. van Alen, Mike S. M. Jetten, Huub J. M. Op den Camp, Maartje A. H. J. van Kessel, Sebastian Lücker
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Genome streamlining in Parcubacteria transitioning from soil to groundwater
    Narendrakumar M. Chaudhari, Olga M. Pérez-Carrascal, Will A. Overholt, Kai U. Totsche, Kirsten Küsel
    Environmental Microbiome.2024;[Epub]     CrossRef
  • Sulfurospirillum diekertiae sp. nov., a tetrachloroethene-respiring bacterium isolated from contaminated soil
    Huijuan Jin, Leitao Huo, Yi Yang, Yan Lv, Jingjing Wang, Julien Maillard, Christof Holliger, Frank E. Löffler, Jun Yan
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Description of Pseudocalidococcus azoricus gen. sp. nov. (Thermosynechococcaceae, Cyanobacteria), a Rare but Widely Distributed Coccoid Cyanobacteria
    Rúben Luz, Rita Cordeiro, Jan Kaštovský, Amélia Fonseca, Ralph Urbatzka, Vitor Vasconcelos, Vítor Gonçalves
    Diversity.2023; 15(12): 1157.     CrossRef
  • The identification of the new species Nitratireductor thuwali sp. nov. reveals the untapped diversity of hydrocarbon-degrading culturable bacteria from the arid mangrove sediments of the Red Sea
    Ramona Marasco, Grégoire Michoud, Fatmah O. Sefrji, Marco Fusi, Chakkiath P. Antony, Kholoud A. Seferji, Alan Barozzi, Giuseppe Merlino, Daniele Daffonchio
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Danxiaibacter flavus gen. nov., sp. nov., a novel bacterium of the family Chitinophagaceae isolated from forest soil on Danxia Mountain
    Zhuo-Huan Zheng, Chun-Yan Lu, Wen-Hui Lian, Jia-Rui Han, Fang Chen, Ting Zhou, Shuai Li, Lei Dong, Wen-Jun Li
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Metabolic profiling of petroleum-degrading microbial communities incubated under high-pressure conditions
    Jinbo Xu, Lu Wang, Weifeng Lv, Xinmin Song, Yong Nie, Xiao-Lei Wu
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Comparative Genomics Reveal the High Conservation and Scarce Distribution of Nitrogen Fixation nif Genes in the Plant-Associated Genus Herbaspirillum
    Ana Marina Pedrolo, Filipe Pereira Matteoli, Cláudio Roberto Fônseca Sousa Soares, Ana Carolina Maisonnave Arisi
    Microbial Ecology.2023; 86(1): 563.     CrossRef
  • UACG: Up-to-Date Archaeal Core Genes and Software for Phylogenomic Tree Reconstruction
    Seong-In Na, Michael James Bailey, Mauricio Chalita, Jae Hyoung Cho, Jongsik Chun
    Journal of Microbiology.2023; 61(7): 683.     CrossRef
  • Alkalicoccobacillus porphyridii sp. nov., isolated from a marine red alga, reclassification of Shouchella plakortidis and Shouchella gibsonii as Alkalicoccobacillus plakortidis comb. nov. and Alkalicoccobacillus gibsonii comb. nov., and emend
    Kyung Hyun Kim, Dong Min Han, Jae Kyeong Lee, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Phocaeicola oris sp. nov., an anaerobic bacterium isolated from the saliva of a patient with oral squamous cell carcinoma
    Jiung-Wen Chen, Chao-Jen Shih, Li-Wha Wu, Yen-Chi Wu, Wei-Fan Chiang, Yuh-Ling Chen, Jer-Horng Wu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Methylacidiphilum caldifontis gen. nov., sp. nov., a thermoacidophilic methane-oxidizing bacterium from an acidic geothermal environment, and descriptions of the family Methylacidiphilaceae fam. nov. and order Methylacidiphilales ord. nov.
    Samuel Imisi Awala, Joo-Han Gwak, Yongman Kim, Chanmee Seo, Andrea Strazzulli, Song-Gun Kim, Sung-Keun Rhee
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Genome-based classification of the class Halobacteria and description of Haladaptataceae fam. nov. and Halorubellaceae fam. nov
    Can Cui, Dong Han, Jing Hou, Heng-Lin Cui
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Complete genome sequence analysis of plant growth-promoting bacterium, Isoptericola sp. AK164 isolated from the rhizosphere of Avicennia marina growing at the Red Sea coast
    Amal Khalaf Alghamdi, Sabiha Parween, Heribert Hirt, Maged M. Saad
    Archives of Microbiology.2023;[Epub]     CrossRef
  • Draft genome sequence of Hahella sp. CR1 and its ability in producing cellulases for saccharifying agricultural biomass
    Melvin Chun Yun Tan, Muhammad Ramziuddin Zakaria, Kok Jun Liew, Chun Shiong Chong
    Archives of Microbiology.2023;[Epub]     CrossRef
  • Sedimenticola hydrogenitrophicus sp. nov. a chemolithoautotrophic bacterium isolated from a terrestrial mud volcano, and proposal of Sedimenticolaceae fam. nov. in the order Chromatiales
    Galina Slobodkina, Alexander Merkel, Nataliya Ratnikova, Alexandra Kuchierskaya, Alexander Slobodkin
    Systematic and Applied Microbiology.2023; 46(5): 126451.     CrossRef
  • Comparative genomic assessment of members of genus Tenacibaculum: an exploratory study
    Rohit Satyam, Shaban Ahmad, Khalid Raza
    Molecular Genetics and Genomics.2023; 298(5): 979.     CrossRef
  • Cave Thiovulum (Candidatus Thiovulum stygium) differs metabolically and genomically from marine species
    Mina Bizic, Traian Brad, Danny Ionescu, Lucian Barbu-Tudoran, Luca Zoccarato, Joost W Aerts, Paul-Emile Contarini, Olivier Gros, Jean-Marie Volland, Radu Popa, Jessica Ody, Daniel Vellone, Jean-François Flot, Scott Tighe, Serban M Sarbu
    The ISME Journal.2023; 17(3): 340.     CrossRef
  • Solicola gregarius gen. nov., sp. nov., a soil actinobacterium isolated after enhanced cultivation with Micrococcus luteus culture supernatant
    Marco A. Lopez Marin, Jachym Suman, Kunal Jani, Pavel Ulbrich, Tomas Cajthaml, Alena Filipova, Petr Pajer, Meina Neumann-Schaal, Michal Strejcek, Ondrej Uhlik
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Microbial Niche Differentiation during Nitrite-Dependent Anaerobic Methane Oxidation
    Wen-Bo Nie, Guo-Jun Xie, Xin Tan, Jie Ding, Yang Lu, Yi Chen, Chun Yang, Qiang He, Bing-Feng Liu, Defeng Xing, Nanqi Ren
    Environmental Science & Technology.2023; 57(17): 7029.     CrossRef
  • Allocoprobacillus halotolerans gen. nov., sp. nov and Coprobacter tertius sp. nov., isolated from human gut microbiota
    Nancy M. Y. Teng, Raymond Kiu, Rhiannon Evans, David J. Baker, Christian Zenner, Stephen D. Robinson, Lindsay J. Hall
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Aridibaculum aurantiacum gen. nov., sp. nov., isolated from the Kumtag Desert soil
    Lei Dong, Shuai Li, Guo-Yuan Shi, Jia-Rui Han, Chun-Yan Lu, Wen-Hui Lian, Ling-Xiang Yue, Dalal Hussien M. Alkhalifah, Wael N. Hozzein, Wen-Jun Li
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Acidaminococcus homini s sp. nov., Amedibacillus hominis sp. nov., Lientehia hominis gen. nov. sp. nov., Merdimmobilis hominis gen. nov. sp. nov., and Paraeggerthella hominis sp. nov., isolated from human faeces
    Rashidin Abdugheni, Dan-Hua Li, Yu-Jing Wang, Meng-Xuan Du, Nan Zhou, Chang Liu, Shuang-Jiang Liu
    International Journal of Systematic and Evolutionary Microbiology.2023;[Epub]     CrossRef
  • Vogesella aquatica sp. nov. and Vogesella margarita sp. nov., isolated from rivers in Southwest China
    Huibin Lu, Li Chen, Lingyang Kong, Linpei Huang, Guangjie Chen
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Dermatobacter hominis gen. nov., sp. nov., a new member of the family Iamiaceae, revealed the potential utilisation of skin-derived metabolites
    HyungWoo Jo, Chaeyun Baek, Young Mok Heo, Hye-Been Kim, Haeun Lee, Seunghyun Kang, Seyoung Mun, Yunseok Oh, Doyeong Ko, Kyudong Han, Raúl Riesco, Martha E. Trujillo, Dong-Geol Lee
    Antonie van Leeuwenhoek.2023; 116(11): 1139.     CrossRef
  • Dynamic Development of Viral and Bacterial Diversity during Grass Silage Preservation
    Johan S. Sáenz, Bibiana Rios-Galicia, Bianca Rehkugler, Jana Seifert
    Viruses.2023; 15(4): 951.     CrossRef
  • Alteromonas gilva sp. nov. and Erythrobacter fulvus sp. nov., isolated from a tidal mudflat
    Sunho Park, Inhyup Kim, Geeta Chhetri, Yoonseop So, Yonghee Jung, Haejin Woo, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Two novel alkalitolerant species Pseudalkalibacillus spartinae sp. nov. and Pseudalkalibacillus sedimenti sp. nov.
    Guo-Hong Liu, Shuang Han, Bing Li, Rui-Li Li, Huai Shi, Qian-Qian Chen, Hend A. Alwathnani, Christopher Rensing, Shun-Gui Zhou
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Description of Brachybacterium sillae sp. nov., a thermophilic bacterium isolated from a hot spring
    Dariimaa Ganbat, DoKyung Oh, Yong-Jik Lee, Dong-Woo Lee, Seong-Bo Kim, Won-Jae Chi, Ki-Eun Lee, Byoung-Hee Lee, You-Jung Jung, Jung-Sook Lee, Sang-Jae Lee
    Antonie van Leeuwenhoek.2023; 116(8): 791.     CrossRef
  • Bacillus mexicanus sp. nov., a biological control bacterium isolated from the common bean (Phaseolus vulgaris L.) crop in Sinaloa, Mexico
    Sergio de los Santos Villalobos, Carmen María Félix Pablos, Valeria Valenzuela Ruiz, Fannie I. Parra Cota
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Genome-centric metagenomic insights into the role of Chloroflexi in anammox, activated sludge and methanogenic reactors
    Patricia Bovio-Winkler, Leandro D. Guerrero, Leonardo Erijman, Pía Oyarzúa, María Eugenia Suárez-Ojeda, Angela Cabezas, Claudia Etchebehere
    BMC Microbiology.2023;[Epub]     CrossRef
  • Potential for homoacetogenesis via the Wood–Ljungdahl pathway in Korarchaeia lineages from marine hydrothermal vents
    Francesca Vulcano, Petra Hribovšek, Emily Olesin Denny, Ida H. Steen, Runar Stokke
    Environmental Microbiology Reports.2023; 15(6): 698.     CrossRef
  • Isolation and characterisation of novel Methanocorpusculum species indicates the genus is ancestrally host-associated
    James G. Volmer, Rochelle M. Soo, Paul N. Evans, Emily C. Hoedt, Ana L. Astorga Alsina, Benjamin J. Woodcroft, Gene W. Tyson, Philip Hugenholtz, Mark Morrison
    BMC Biology.2023;[Epub]     CrossRef
  • Thermomonas mangrovi sp. nov., isolated from soil of a mangrove nature reserve
    Shanshan Xu, Junpeng Chen, Si Chen, Qiliang Lai, Zengzhi Liu, Ying Xu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Proposal to transfer Bacillus massiliigorillae to the genus Peribacillus as Peribacillus massiliigorillae comb. nov., and Bacillus sinesaloumensis to the genus Ferdinandcohnia as Ferdinandcohnia sinesaloumensis comb. nov
    Awalagaway Dhulappa, Manik Prabhu Narsing Rao, Haijie Wang, Bhagwan Narayan Rekadwad, Ying-Qian Kang
    Archives of Microbiology.2023;[Epub]     CrossRef
  • Characterization and Antioxidant Activity of Exopolysaccharides Produced by Lysobacter soyae sp. nov Isolated from the Root of Glycine max L.
    Inhyup Kim, Geeta Chhetri, Yoonseop So, Sunho Park, Yonghee Jung, Haejin Woo, Taegun Seo
    Microorganisms.2023; 11(8): 1900.     CrossRef
  • Leucobacter edaphi sp. nov., a highly chromate-tolerant bacterium isolated from chromium containing chemical plant soil
    Bijun Zheng, Zhe Xu, Li Yang, Guangyang Jiang, Jia Chen, Yichen Yang, Yongqiang Tian
    Antonie van Leeuwenhoek.2023; 116(12): 1433.     CrossRef
  • Roseateles albus sp. nov., Roseateles koreensis sp. nov. and Janthinobacterium fluminis sp. nov., isolated from freshwater at Jucheon River, and emended description of Roseateles aquaticus comb. nov.
    Sunho Park, Inhyup Kim, Geeta Chhetri, Yoonseop So, Yonghee Jung, Haejin Woo, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Isolation and Genomic Analysis of 3-Chlorobenzoate-Degrading Bacteria from Soil
    Ifat Ara, Ryota Moriuchi, Hideo Dohra, Kazuhide Kimbara, Naoto Ogawa, Masaki Shintani
    Microorganisms.2023; 11(7): 1684.     CrossRef
  • Brytella acorum gen. nov., sp. nov., a novel acetic acid bacterium from sour beverages
    Atena Sadat Sombolestani, Dries Bongaerts, Eliza Depoorter, Ilse Cleenwerck, Anneleen D. Wieme, Scott J. Britton, Stefan Weckx, Luc De Vuyst, Peter Vandamme
    Systematic and Applied Microbiology.2023; 46(5): 126440.     CrossRef
  • Complete genome sequence of Vibrio gazogenes PB1: an estuarine bacterium capable of producing prodigiosin from starch or cellulose
    Bincy Baby, Dhanya Vijay, Pretty S. Philip, Afra A. Alnuaimi, Hessa M. Almansoori, Sarah O. Areidat, Gulfaraz Khan, Ranjit Vijayan, M. Kalim Akhtar
    Frontiers in Marine Science.2023;[Epub]     CrossRef
  • Tianweitania aestuarii sp. nov., isolated from a coastal dune, reclassification of Corticibacterium populi as Tianweitania populi comb. nov., and emended description of the genus Tianweitania
    Ji Hyeon Song, Sooyeon Park, Jung-Sook Lee, Wonyong Kim, Jung-Hoon Yoon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Fluviispira vulneris sp. nov., isolated from human wound secretions
    Peijuan Tang, Na Peng, Pengwen Ouyang, Sheng Long, Zhenhua Wei, Xingchun Chen, Pinghua Qu, Liangyi Xie
    Antonie van Leeuwenhoek.2023; 116(12): 1305.     CrossRef
  • Neorhizobium turbinariae sp. nov., a coral-beneficial bacterium isolated from Turbinaria peltata
    Hao Sun, Zhiyuan Miao, Shuai Liu, Xuerui Liu, Bogui Chen, Baolin Liao, Baohua Xiao
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Description of Salinimicrobium tongyeongense sp. nov., isolated from seawater
    Dariimaa Ganbat, Dong-Woo Lee, Seong-Bo Kim, Yong-Jik Lee, Gaewon Nam, Won-Jae Chi, Byoung-Hee Lee, You-Jung Jung, Jung-Sook Lee, Sang-Jae Lee
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Genomic analysis and characterization of phages infecting the marine Roseobacter CHAB-I-5 lineage reveal a globally distributed and abundant phage genus
    Zefeng Zhang, Zuqing Wu, He Liu, Mingyu Yang, Rui Wang, Yanlin Zhao, Feng Chen
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • PhaGAA: an integrated web server platform for phage genome annotation and analysis
    Jiawei Wu, Qingrui Liu, Min Li, Jiliang Xu, Chen Wang, Junyin Zhang, Minfeng Xiao, Yannan Bin, Junfeng Xia, Can Alkan
    Bioinformatics.2023;[Epub]     CrossRef
  • Comparative Genomics Reveals Three Genetic Groups of the Whitefly Obligate Endosymbiont Candidatus Portiera aleyrodidarum
    Teng Lei, Ning Luo, Chao Song, Junwei Yu, Yuhang Zhou, Xin Qi, Yinquan Liu
    Insects.2023; 14(11): 888.     CrossRef
  • Roseobacter insulae sp. nov. and Loktanella gaetbuli sp. nov., isolated from tidal flats in the Yellow Sea in Korea
    Eun Bee Lee, Sooyeon Park, Wonyong Kim, Jung-Hoon Yoon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Novosphingobium mangrovi sp. nov., isolated from mangrove sediment
    Qian Huang, Zhihui Qian, Tao Peng, Jin Li, Xueying Ye, Tongwang Huang, Zhong Hu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Phylotaxonomic assessment based on four core gene sets and proposal of a genus definition among the families Paracoccaceae and Roseobacteraceae
    Dao-Feng Zhang, Wei He, Zongze Shao, Iftikhar Ahmed, Yuqin Zhang, Wen-Jun Li, Zhe Zhao
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Scleromatobacter humisilvae gen. nov., sp. nov., a novel bacterium isolated from oak forest soil
    Sophie Mieszkin, Blandine Trouche, Julien Ancousture, Youssef Raouf, Stéphane Uroz, Karine Alain
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Comammox Nitrospira and Ammonia-Oxidizing Archaea Are Dominant Ammonia Oxidizers in Sediments of an Acid Mine Lake Containing High Ammonium Concentrations
    Deyong Li, Zhichang Ren, Yangqi Zhou, Lugao Jiang, Min Zheng, Guoqiang Liu, Jennifer B. Glass
    Applied and Environmental Microbiology.2023;[Epub]     CrossRef
  • Citrobacter sp. Y3 harbouring novel gene HBCD-hd-1 mineralizes hexabromocyclododecane via new metabolic pathways according to multi-omics characterization
    Xingxing Peng, Tianyu Li, Qihang Zheng, Yingyuan Lu, Yuzhe He, Yetao Tang, Rongliang Qiu
    Journal of Hazardous Materials.2023; 442: 130071.     CrossRef
  • Opacimonas viscosa gen. nov., sp. nov., a novel bacterium isolated from phycosphere
    Xuanru Lin, Runlin Cai, Guanjing Cai, Jianmin Xie, Zhenyuan Zhou, Hui Wang
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Description of Microbacterium neungamense sp. nov. isolated from a hot spring
    Dariimaa Ganbat, Ga Eul Jeong, DoKyung Oh, Dong-Woo Lee, Yong-Jik Lee, Seong-Bo Kim, In-Tae Cha, Won-Jae Chi, Seul-Ki Park, Jung-Sook Lee, Sang-Jae Lee
    Archives of Microbiology.2023;[Epub]     CrossRef
  • Habitat distribution of the genus Belliella in continental waters and the description of Belliella alkalica sp. nov., Belliella calami sp. nov. and Belliella filtrata sp. nov.
    Kristóf Korponai, Sára Szuróczki, Zsuzsanna Márton, Attila Szabó, Paula V. Morais, Diogo Neves Proença, Erika Tóth, Emil Boros, Károly Márialigeti, Tamás Felföldi
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Molecular Characterization of Indigenous Rhizobia from Kenyan Soils Nodulating with Common Beans
    Clabe Wekesa, Kelvin Kiprotich, Patrick Okoth, George O. Asudi, John O. Muoma, Alexandra C. U. Furch, Ralf Oelmüller
    International Journal of Molecular Sciences.2023; 24(11): 9509.     CrossRef
  • Putative novel hydrogen- and iron-oxidizing sheath-producing Zetaproteobacteria thrive at the Fåvne deep-sea hydrothermal vent field
    Petra Hribovšek, Emily Olesin Denny, Håkon Dahle, Achim Mall, Thomas Øfstegaard Viflot, Chanakan Boonnawa, Eoghan P. Reeves, Ida Helene Steen, Runar Stokke, Michael S. Rappe
    mSystems.2023;[Epub]     CrossRef
  • Thiovibrio frasassiensis gen. nov., sp. nov., an autotrophic, elemental sulphur disproportionating bacterium isolated from sulphidic karst sediment, and proposal of Thiovibrionaceae fam. nov.
    Heidi S. Aronson, Cais Thomas, Maia K. Bhattacharyya, Shaan R. Eckstein, Sophia R. Jensen, Roman A. Barco, Jennifer L. Macalady, Jan P. Amend
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Hufsiella ginkgonis gen. nov., sp. nov. and Hufsiella arboris sp. nov., isolated from tree barks
    Heeyoung Kang, Seokhyeon Bae, Haneul Kim, Kiseong Joh
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Phenotypic and genomic characterization of the first alkaliphilic aceticlastic methanogens and proposal of a novel genus Methanocrinis gen.nov. within the family Methanotrichaceae
    Maria A. Khomyakova, Alexander Y. Merkel, Alexander I. Slobodkin, Dimitry Y. Sorokin
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Description of Xanthocytophaga agilis sp. nov. and Xanthocytophaga flavus sp. nov. of the new genus Xanthocytophaga gen. nov and the proposal of Rhodocytophagaceae fam. nov. within the order Cytophagales
    Xianjiao Zhang, Guang-Da Feng, Yang Liu, Fan Yang, Yanxuan Li, Xiaoqin Deng, Honghui Zhu, Qing Yao
    Archives of Microbiology.2023;[Epub]     CrossRef
  • Draft genome sequence of Joostella atrarenae M1-2T with cellulolytic and hemicellulolytic ability
    Kok Jun Liew, Muhammad Ramziuddin Zakaria, Clarine Wan Ling Hong, Melvin Chun Yun Tan, Chun Shiong Chong
    3 Biotech.2023;[Epub]     CrossRef
  • Transcriptional Landscapes of Herelleviridae Bacteriophages and Staphylococcus aureus during Phage Infection: An Overview
    Maria Kornienko, Dmitry Bespiatykh, Roman Gorodnichev, Narina Abdraimova, Egor Shitikov
    Viruses.2023; 15(7): 1427.     CrossRef
  • Tenacibaculum tangerinum sp. nov., isolated from a tidal flat sediment
    Sang Hyun Lee, Yeonjae Yoo, Dae Young Kwon, Jong Seong Khim, Xiaoyue Xu, Bogun Kim, In-Geol Choi, Jae-Jin Kim
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Mesonia aestuariivivens sp. nov., isolated from a tidal flat
    Sooyeon Park, Jung-Sook Lee, Wonyong Kim, Jung-Hoon Yoon
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Metabacillus rhizolycopersici sp. nov., Isolated from the Rhizosphere Soil of Tomato Plants
    Rong Ma, Shan-Wen He, Xing Wang, Kyu Kyu Thin, Ji-Gang Han, Xiao-Xia Zhang
    Current Microbiology.2022;[Epub]     CrossRef
  • Longitalea arenae gen. nov., sp. nov. and Longitalea luteola sp. nov., two new members of the family Chitinophagaceae isolated from desert soil
    Shuai Li, Lei Dong, Jia-Rui Han, Guo-Yuan Shi, Chun-Yan Lu, Lu Xu, Wen-Hui Lian, Dalal Hussien M. Alkhalifah, Wael N. Hozzein, Wen-Jun Li
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Description of Deefgea piscis sp. nov., and Deefgea tanakiae sp. nov., isolated from the gut of Korean indigenous fish
    Do-Hun Gim, So-Yeon Lee, Jeong Eun Han, Jae-Yun Lee, Seo Min Kang, Jin-Woo Bae
    Journal of Microbiology.2022; 60(11): 1061.     CrossRef
  • Fibrella aquatilis sp. nov., Fibrella rubiginis sp. nov. and Fibrella forsythiae sp. nov., isolated from freshwater, rusty iron and forsythia flower
    Heeyoung Kang, Haneul Kim, Seokhyeon Bae, Kiseong Joh
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Pedomonas mirosovicensis gen. nov., sp. nov., a bacterium isolated from soil with the aid of Micrococcus luteus culture supernatant containing resuscitation-promoting factor
    Marco A. Lopez Marin, Jachym Suman, Kunal Jani, Pavel Ulbrich, Tomas Cajthaml, Petr Pajer, Jacqueline Wolf, Meina Neumann-Schaal, Michal Strejcek, Ondrej Uhlik
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Psychroflexus curvus sp. nov., Psychroflexus longus sp. nov. and Psychroflexus montanilacus sp. nov., isolated from salt lakes on the Tibetan Plateau
    Huibin Lu, Peixin Gao, Dorji Phurbu, Qinglong Wu, Peng Xing
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • (Meta)Genomic Analysis Reveals Diverse Energy Conservation Strategies Employed by Globally Distributed Gemmatimonadota
    Xiaowei Zheng, Xin Dai, Yaxin Zhu, Jian Yang, Hongchen Jiang, Hailiang Dong, Li Huang, Steven J. Hallam
    mSystems.2022;[Epub]     CrossRef
  • Complete Genome Sequence of Weissella cibaria NH9449 and Comprehensive Comparative-Genomic Analysis: Genomic Diversity and Versatility Trait Revealed
    Komwit Surachat, Duangporn Kantachote, Monwadee Wonglapsuwan, Arnon Chukamnerd, Panchalika Deachamag, Pimonsri Mittraparp-arthorn, Kongpop Jeenkeawpiam
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Sulfuricystis multivorans gen. nov., sp. nov. and Sulfuricystis thermophila sp. nov., facultatively autotropic sulfur-oxidizing bacteria isolated from a hot spring, and emended description of the genus Rugosibacter
    Hisaya Kojima, Miho Watanabe, Naoyuki Miyata, Manabu Fukui
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Draft genome sequence of Thermovorax subterraneus 70BT, a thermophile isolated from a geothermally active underground mine that produces hydrogen
    Kian Mau Goh, Kok Jun Liew, Saleha Shahar, Iffah Izzati Zakaria, Ummirul Mukminin Kahar
    Data in Brief.2022; 45: 108695.     CrossRef
  • Consumption of N2O by Flavobacterium azooxidireducens sp. nov. Isolated from Decomposing Leaf Litter of Phragmites australis (Cav.)
    Undine Behrendt, Tobias Spanner, Jürgen Augustin, Dominik H. Zak, Marcus A. Horn, Steffen Kolb, Andreas Ulrich
    Microorganisms.2022; 10(11): 2304.     CrossRef
  • Citrobacter Sp. Y3 Harboring a Novel Gene Hbcd-Hd-1 Mineralizes Hexabromocyclododecane (Hbcd) with New Metabolic Pathways Based on Multi-Omics Characterization
    Xingxing Peng, Tianyu Li, Qihang Zheng, Yingyuan Lu, Yuzhe He, Yetao Tang, Rongliang Qiu
    SSRN Electronic Journal.2022;[Epub]     CrossRef
  • Neokomagataea anthophila sp. nov., an osmotolerant acetic acid bacterium isolated in Thailand and emended description of the genus Neokomagataea
    Piyanat Charoenyingcharoen, Pattaraporn Yukphan, Sukunphat Malimas, Somsak Likhitrattanapisal, Somboon Tanasupawat, Yuzo Yamada
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Description of Flavobacterium cyclinae sp. nov. and Flavobacterium channae sp. nov., isolated from the intestines of Cyclina sinensis (Corb shell) and Channa argus (Northern snakehead)
    Seomin Kang, Jae-Yun Lee, Jeong Eun Han, Yun-Seok Jeong, Do-Hun Gim, Jin-Woo Bae
    Journal of Microbiology.2022; 60(9): 890.     CrossRef
  • Systematic whole-genome sequencing reveals an unexpected diversity among actinomycetoma pathogens and provides insights into their antibacterial susceptibilities
    Andrew Keith Watson, Bernhard Kepplinger, Sahar Mubarak Bakhiet, Najwa Adam Mhmoud, Jonathan Chapman, Nick EE Allenby, Katarzyna Mickiewicz, Michael Goodfellow, Ahmed Hassan Fahal, Jeff Errington, David John Chandler
    PLOS Neglected Tropical Diseases.2022; 16(7): e0010128.     CrossRef
  • Insights into ecological roles of uncultivated bacteria in Katase hot spring sediment from long-read metagenomics
    Shingo Kato, Sachiko Masuda, Arisa Shibata, Ken Shirasu, Moriya Ohkuma
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Apilactobacillus apisilvae sp. nov., Nicolia spurrieriana gen. nov. sp. nov., Bombilactobacillus folatiphilus sp. nov. and Bombilactobacillus thymidiniphilus sp. nov., four new lactic acid bacterial isolates from stingless bees Tetragonula ca
    Scott A. Oliphant, Nathan S. Watson-Haigh, Krista M. Sumby, Jennifer Gardner, Scott Groom, Vladimir Jiranek
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Description of Prasinibacter corallicola gen. nov., sp. nov., a zeaxanthin-producing bacterium isolated from stony coral Porites lutea
    Guanghua Wang, Jianfeng Liu, Yuanjin Li, Jin Li, Jixin Luo, Biao Chen, Zhiheng Liao, Hongfei Su, Jiayuan Liang, Kefu Yu
    Antonie van Leeuwenhoek.2022; 115(7): 933.     CrossRef
  • Faunimonas pinastri gen. nov., sp. nov., an endophyte from a pine tree of the family Pleomorphomonadaceae, class Alphaproteobacteria
    Diogo N. Proença, William B. Whitman, Nicole Shapiro, Tanja Woyke, Nikos C. Kyrpides, Paula V. Morais
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Physiological and genomic characterisation of Luteimonas fraxinea sp. nov., a bacterial species associated with trees tolerant to ash dieback
    Kristina Ulrich, Regina Becker, Undine Behrendt, Michael Kube, Volker Schneck, Andreas Ulrich
    Systematic and Applied Microbiology.2022; 45(4): 126333.     CrossRef
  • Neglectibacter timonensis gen. nov., sp. nov. and Scatolibacter rhodanostii gen. nov., sp. nov., two anaerobic bacteria isolated from human stool samples
    Rita Zgheib, Ahmad Ibrahim, Hussein Anani, Sokhna Ndongo, Melhem Bilen, Nicholas Armstrong, Magali Richez, Didier Raoult, Pierre-Edouard Fournier
    Archives of Microbiology.2022;[Epub]     CrossRef
  • A stable home for an equine pathogen: valid publication of the binomial Prescottella equi gen. nov., comb. nov., and reclassification of four rhodococcal species into the genus Prescottella.
    Vartul Sangal, Michael Goodfellow, Amanda L. Jones, Iain C. Sutcliffe
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Devosia ureilytica sp. nov., isolated from Kuche River in China
    Bin-Bin Li, Xiao-Juan Zhang, Danni Wu, Dan-Dan Zhang, Bao-Zhu Fang, Hong-Can Liu, Yu-Guang Zhou, Man Cai, Wen-Jun Li, Guo-Xing Nie
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Sphingomonas arenae sp. nov., isolated from desert soil
    Lei Dong, Shuai Li, Wen-Hui Lian, Qi-Chuang Wei, Osama Abdalla Abdelshafy Mohamad, Wael N. Hozzein, Iftikhar Ahmed, Wen-Jun Li
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Prokaryotes of renowned Karlovy Vary (Carlsbad) thermal springs: phylogenetic and cultivation analysis
    Tereza Smrhova, Kunal Jani, Petr Pajer, Gabriela Kapinusova, Tomas Vylita, Jachym Suman, Michal Strejcek, Ondrej Uhlik
    Environmental Microbiome.2022;[Epub]     CrossRef
  • Dongia deserti sp. nov., Isolated from the Gurbantunggut Desert Soil
    Chun-Yan Lu, Lei Dong, Dong Wang, Shuai Li, Bao-Zhu Fang, Ming-Xian Han, Feng Liu, Hong-Chen Jiang, Iftikhar Ahmed, Wen-Jun Li
    Current Microbiology.2022;[Epub]     CrossRef
  • Cell Wall Glycopolymers as a Diagnostic Trait of Arthrobacter crystallopoietes
    N. V. Potekhina, E. V. Ariskina, A. S. Shashkov, T. M. Tul’skaya, L. I. Evtushenko
    Microbiology.2022; 91(3): 259.     CrossRef
  • Variovorax terrae sp. nov. Isolated from Soil with Potential Antioxidant Activity
    Chae Yung Woo, Jaisoo Kim
    Journal of Microbiology and Biotechnology.2022; 32(7): 855.     CrossRef
  • Parasphingorhabdus cellanae sp. nov., isolated from the gut of a Korean limpet, Cellana toreuma
    Ji-Ho Yoo, Jeong Eun Han, June-Young Lee, Su-Won Jeong, Yun-Seok Jeong, Jae-Yun Lee, So-Yeon Lee, Hojun Sung, Euon Jung Tak, Hyun Sik Kim, Pil Soo Kim, Jee-Won Choi, Do-Yeon Kim, In Chul Jeong, Do-Hun Gim, Seo Min Kang, Jin-Woo Bae
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Algiphilus acroporae sp. nov. and Coraliihabitans acroporae gen. nov. sp. nov., isolated from scleractinian coral Acropora digitifera
    Hao Sun, Huina Zheng, Baolin Liao, Bogui Chen, Aihua Li, Baohua Xiao
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Comparative Genomics Reveal the Animal-Associated Features of the Acanthopleuribacteraceae Bacteria, and Description of Sulfidibacter corallicola gen. nov., sp., nov.
    Guanghua Wang, Yuanjin Li, Jianfeng Liu, Biao Chen, Hongfei Su, Jiayuan Liang, Wen Huang, Kefu Yu
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Oceanobacillus alkalisoli sp. nov., an alkaliphilic bacterium isolated from saline-alkaline soil
    Pin-Jiao Jin, Lei Sun, Manik Prabhu Narsing Rao, Jian-Yu Jiao, Xiu-Jun Sun, Wen-Jun Li, Shuang Wang
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Sabulibacter ruber gen. nov., sp. nov., a novel bacterium in the family Hymenobacteraceae, isolated from desert soil
    Wen-Hui Lian, Shuai Li, Zhi-Liang Lin, Jia-Rui Han, Osama Abdalla Abdelshafy Mohamad, Li Li, Ying Lin, Wael N. Hozzein, Lei Dong, Wen-Jun Li
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Sessilibacter corallicola gen. nov., sp. nov., a sessile bacterium isolated from coral Porites lutea
    Jianfeng Liu, Jin Li, Jixin Luo, Yuanjin Li, Zian Yang, Chengli Huang, Feilong Sun, Guanghua Wang
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Genomic and physiological analysis of C50 carotenoid-producing novel Halorubrum ruber sp. nov.
    Chi Young Hwang, Eui-Sang Cho, Won Jong Rhee, Eunjung Kim, Myung-Ji Seo
    Journal of Microbiology.2022; 60(10): 1007.     CrossRef
  • Novosphingobium percolationis sp. nov. and Novosphingobium huizhouense sp. nov., isolated from landfill leachate of a domestic waste treatment plant
    Xiaoling He, Huibin Lu, Wenzhe Hu, Tongchu Deng, Xiaofan Gong, Xunan Yang, Da Song, Mei He, Meiying Xu
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Enterovibrio paralichthyis sp. nov., isolated from the gut of an olive flounder Paralichthys olivaceus
    Young-Ok Kim, In-Suk Park, Dong-Gyun Kim, Sooyeon Park, Sung Hoon Han, Jung-Hoon Yoon
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Desulfofustis limnaeus sp. nov., a freshwater sulfate-reducing bacterium isolated from marsh soil
    Miho Watanabe, Ayaka Takahashi, Hisaya Kojima, Naoyuki Miyata, Manabu Fukui
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Taxogenomic status of phylogenetically distant Frankia clusters warrants their elevation to the rank of genus: A description of Protofrankia gen. nov., Parafrankia gen. nov., and Pseudofrankia gen. nov. as three novel genera within the family Frankiaceae
    Maher Gtari
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Genomic and Physiological Characterization of Metabacillus flavus sp. nov., a Novel Carotenoid-Producing Bacilli Isolated from Korean Marine Mud
    Chi Young Hwang, Eui-Sang Cho, Deok Jun Yoon, In-Tae Cha, Dong-Hyun Jung, Young-Do Nam, So-Lim Park, Seong-Il Lim, Myung-Ji Seo
    Microorganisms.2022; 10(5): 979.     CrossRef
  • Nocardioides palaemonis sp. nov. and Tessaracoccus palaemonis sp. nov., isolated from the gastrointestinal tract of lake prawn
    Do-Yeon Kim, In-Chul Jeong, So-Yeon Lee, Yun-Seok Jeong, Jeong Eun Han, Euon Jung Tak, June-Young Lee, Pil Soo Kim, Dong-Wook Hyun, Jin-Woo Bae
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Description of Ornithinimicrobium ciconiae sp. nov., and Ornithinimicrobium avium sp. nov., isolated from the faeces of the endangered and near-threatened birds
    So-Yeon Lee, Hojun Sung, Pil Soo Kim, Hyun Sik Kim, Jae-Yun Lee, June-Young Lee, Yun-Seok Jeong, Euon Jung Tak, Jeong Eun Han, Dong-Wook Hyun, Jin-Woo Bae
    Journal of Microbiology.2021; 59(11): 978.     CrossRef
  • Phylogenomic Analyses of the Genus Pseudomonas Lead to the Rearrangement of Several Species and the Definition of New Genera
    Zaki Saati-Santamaría, Ezequiel Peral-Aranega, Encarna Velázquez, Raúl Rivas, Paula García-Fraile
    Biology.2021; 10(8): 782.     CrossRef
  • Pseudomarimonas arenosa gen. nov., sp. nov. isolated from marine sand
    Veeraya Weerawongwiwat, Jong-Hwa Kim, Jung-Hoon Yoon, Jung-Sook Lee, Ampaitip Sukhoom, Wonyong Kim
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Yangia mangrovi sp. nov., a novel member of the Roseobacter clade isolated from mangrove soil and emended description of Yangia pacifica Dai et al. 2006
    Ashish Verma, Shiva S. Sundharam, Yash Pal, Bhawana Bisht, Pooja Yadav, Srinivasan Krishnamurthi
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
Reviews
MINIREVIEW] The therapeutic applications of antimicrobial peptides (AMPs): a patent review
Hee-Kyoung Kang , Cheolmin Kim , Chang Ho Seo , Yoonkyung Park
J. Microbiol. 2017;55(1):1-12.   Published online December 30, 2016
DOI: https://doi.org/10.1007/s12275-017-6452-1
  • 901 View
  • 2 Download
  • 297 Crossref
AbstractAbstract PDF
Antimicrobial peptides (AMPs) are small molecules with a broad spectrum of antibiotic activities against bacteria, yeasts, fungi, and viruses and cytotoxic activity on cancer cells, in addition to anti-inflammatory and immunomodulatory activities. Therefore, AMPs have garnered interest as novel therapeutic agents. Because of the rapid increase in drug-resistant pathogenic microorganisms, AMPs from synthetic and natural sources have been developed using alternative antimicrobial strategies. This article presents a broad analysis of patents referring to the therapeutic applications of AMPs since 2009. The review focuses on the universal trends in the effective design, mechanism, and biological evolution of AMPs.

Citations

Citations to this article as recorded by  
  • Boc‐Protected Phenylalanine and Tryptophan‐Based Dipeptides: A Broad Spectrum Anti‐Bacterial Agent
    Arpita Halder, Ravikumar Pasupuleti, Subramaniyam Sivagnanam, Priyadip Das, Oindrilla Mukherjee
    Biopolymers.2025;[Epub]     CrossRef
  • Detection of antibacterial peptides in artisanal rennet and evaluation of their antibacterial activity
    Angela Michela Immacolata Montone, Sara Elsa Aita, Federico Capuano, Angelo Citro, Alessandra Esposito, Alfonso Gallo, Morena Nappa, Enrico Taglioni, Carmela Maria Montone
    International Dairy Journal.2025; 160: 106074.     CrossRef
  • Chiral nanosystem and chiral supraparticles for drug delivery: an expert opinion
    Mahfoozur Rahman, Janhvi Singh, Alhussain Aodah, Majed Alrobaian, Nabil K Alruwaili, Waleed H Almalki, Salem Salman Almujri, Safia Obaidur Rab, Osama A. Madkhali, Ankit Sahoo, Jonathan A Lal
    Expert Opinion on Drug Delivery.2025; 22(2): 143.     CrossRef
  • Zeolitic imidazolium framework (ZIF-8) and their derivative-based material for antibacterial study: a comprehensive review
    Asima Subhadarshini, Binita Nanda
    Discover Materials.2025;[Epub]     CrossRef
  • Comprehensive exploration of programmed cell death landscape in lung adenocarcinoma combining multi-omic analysis and experimental verification
    Peng Yu, Leyang Xiao, Kaibo Hu, Jitao Ling, Yixuan Chen, Ruiqi Liang, Xinyu Liu, Deju Zhang, Yuzhen Liu, Tongchun Weng, Hongfa Jiang, Jing Zhang, Wuming Wang
    Scientific Reports.2025;[Epub]     CrossRef
  • Unfolding the Potential of Pyrrole- and Indole-Based Allylidene Hydrazine Carboximidamides as Antimicrobial Agents
    Amit Sharma, Sonali J. Jain, Prabhat Nath Jha, Santosh Rudrawar, Sandip B. Bharate, Hemant R. Jadhav
    ACS Infectious Diseases.2025; 11(2): 493.     CrossRef
  • Exploring the potential of anticancer peptides as therapeutic agents for cancer treatment
    Reza Ghavimi, Samira Mahmoudi, Mohsen Mohammadi, Elahe Khodamoradi, Ali Jahanian-Najafabadi
    Research in Pharmaceutical Sciences.2025; 20(2): 165.     CrossRef
  • Role of Milk-Derived Antimicrobial Peptides and their Future Perspectives in Pharmaceutical/ Dairy Industries
    Venkateshwaran Krishnaswami, Selvakumar Muruganantham, Jacob Raja, Subhashini K Sripathi
    Current Functional Foods.2025;[Epub]     CrossRef
  • Nano-enhanced peptides: bridging cutting-edge tech and biology to outsmart resilient microbes
    Anurag Yadav, Kusum Yadav
    Academia Nano: Science, Materials, Technology.2025;[Epub]     CrossRef
  • The effect of C-terminal deamidation on bacterial susceptibility and resistance to modelin-5
    Sarah R. Dennison, Leslie H. G. Morton, Kamal Badiani, Frederick Harris, David A. Phoenix
    European Biophysics Journal.2025; 54(1-2): 45.     CrossRef
  • Production, Delivery, and Regulatory Aspects for Application of Plant-Based Anti-microbial Peptides: a Comprehensive Review
    Praveen Nagella, Balamuralikrishnan Balasubramanian, Sungkwon Park, Udisha Singh, Arpita Jayan, Saptadeepa Mukherjee, Aatika Nizam, Arun Meyyazhagan, Manikantan Pappuswamy, Joseph Kadanthottu Sebastian, Vasantha Veerappa Lakshmaiah, Amin Mousavi Khaneghah
    Probiotics and Antimicrobial Proteins.2025; 17(4): 2362.     CrossRef
  • Effect of Chirality and Amphiphilicity on the Antimicrobial Activity of Tripodal Lysine-Based Peptides
    Anindyasundar Adak, Valeria Castelletto, Lucas de Mello, Bruno Mendes, Glyn Barrett, Jani Seitsonen, Ian W. Hamley
    ACS Applied Bio Materials.2025; 8(1): 803.     CrossRef
  • Recent advances, strategies, and future perspectives of peptide-based drugs in clinical applications
    Qimeng Yang, Zhipeng Hu, Hongyu Jiang, Jialing Wang, Han Han, Wei Shi, Hai Qian
    Chinese Journal of Natural Medicines.2025; 23(1): 31.     CrossRef
  • Advance in peptide-based drug development: delivery platforms, therapeutics and vaccines
    Wenjing Xiao, Wenjie Jiang, Zheng Chen, Yu Huang, Junyi Mao, Wei Zheng, Yonghe Hu, Jianyou Shi
    Signal Transduction and Targeted Therapy.2025;[Epub]     CrossRef
  • Small peptides from non-edible fish waste with antimicrobial activity
    Benjamaporn Wonganu, Sittiruk Roytrakul, P. Jearanaisilawong, P. Srisungsitthisunti
    E3S Web of Conferences.2025; 602: 02004.     CrossRef
  • Synthesis and Characterization of Peptide-Chitosan Engineered Nanoparticles as an Ideal Platform for Food Preservation, Cosmetics, and Pharmaceutical Applications
    Aminallah Tahmasebi, Najmeh Sabahi Mohammadi, Babak Jamali, Shokufeh Taziki Shams-Abadi, Ali Khoddami, Rajender S. Varma, Mehran Ghasemlou, Chul Won Lee
    Polymer Reviews.2025; 65(3): 854.     CrossRef
  • Antimicrobial peptides from earthworms: Emerging candidates for novel therapeutic applications
    Saravanakumar Venkatachalam, Johnson Retnaraj Samuel Selvan Christyraj, Reiya Bosco Don Bosco, Beryl Vedha Yesudhason
    Toxicon.2025; 264: 108458.     CrossRef
  • Synergistic effects of recombinant expressed Fowlicidin and Thymosin α1 hybrid peptides in modulating inflammation and infection in avian macrophages
    Baseer Ahmad, Zaheer Abbas, Wei Xubiao, Kashif Hussain, Atif Rehman, Si Dayong, Asghar Abbas, Christina Hölzel, Zhang Rijun
    Frontiers in Microbiology.2025;[Epub]     CrossRef
  • Multiple probiotic effects of Ligilactobacillus murinus strain S27 on large yellow croaker (Larimichthys crocea): Promoting growth, improving intestinal health, and enhancing resistance against Pseudomonas plecoglossicida
    Zhixin Lin, Jianping Zeng, Yu Zhai, Yuan Shi, Xinhua Chen
    Aquaculture.2025; 607: 742657.     CrossRef
  • Video-Driven Artificial Intelligence for Predictive Modelling of Antimicrobial Peptide Generation: Literature Review on Advances and Challenges
    Jielu Yan, Zhengli Chen, Jianxiu Cai, Weizhi Xian, Xuekai Wei, Yi Qin, Yifan Li
    Applied Sciences.2025; 15(13): 7363.     CrossRef
  • A Type Ia Crustin from the Pacific White Shrimp Litopenaeus vannamei Exhibits Antimicrobial and Chemotactic Activities
    Xiuyan Gao, Yuan Liu, Xiaoyang Huang, Zhanyuan Yang, Mingzhe Sun, Fuhua Li
    Biomolecules.2025; 15(7): 1015.     CrossRef
  • Evaluating Host Defense Peptides: A Comparative Analysis of Synthetic Peptides and Recombinant Concatemers
    Cristina Saubi, José Vicente Carratalá, Roberto Bello-Madruga, Adrià López-Cano, Susanna Navarro, Anna Arís, Elena Garcia-Fruitós
    Biomolecules.2025; 15(7): 980.     CrossRef
  • Exploring bioactive compounds and biological functions of underutilized legumes: Advancing the development of ideal plant-based milks
    Taha Mehany, Babatunde Olawoye, Oyekemi Popoola-Akinola
    Journal of Future Foods.2025;[Epub]     CrossRef
  • Bioinspired nanocarriers for advanced drug delivery
    Kalyani Pathak, Mohammad Zaki Ahmad, Jon Jyoti Sahariah, Manisha Sahariah, Surajit Konwar, Banasri Talukdar, Aparoop Das, Partha Protim Borthakur, Ankur Gogoi
    Nano Express.2025; 6(3): 032001.     CrossRef
  • Synergistic effect of A novel antimicrobial peptide and silver nanoparticles against drug-resistant P. aeruginosa
    Abolfazl Eyni, Mehdi Goudarzi, Fatemeh Peyravii Ghadikolaii, Abbasali Dehpori, Saeed Soltani
    AMB Express.2025;[Epub]     CrossRef
  • Antimicrobial peptides as promising additives to Awassi lambs nutrition
    A. M. M Mani
    BULGARIAN JOURNAL OF VETERINARY MEDICINE.2025; 28(3): 376.     CrossRef
  • Octopus minor Antimicrobial Peptide-Loaded Chitosan Nanoparticles Accelerate Dermal Wound Healing
    Mawalle Kankanamge Hasitha Madhawa Dias, Shan Lakmal Edirisinghe, Mahanama De Zoysa, Ilson Whang
    International Journal of Molecular Sciences.2025; 26(19): 9701.     CrossRef
  • Antimicrobial Resistance and New Antimicrobial Agents, A Review of the Literature
    Zhaoyu Huang, Zhiyong Zhai, Ping Zhou, Wanjun Li, Wei Hu, Wei Gong
    Current Medicinal Chemistry.2025; 32(30): 6497.     CrossRef
  • The gut microbiome as a major source of drug-resistant infections: emerging strategies to decolonize and target the gut reservoir
    Ishrya Sharma, Drishya Sudarsanan, Shannon Moonah
    Frontiers in Cellular and Infection Microbiology.2025;[Epub]     CrossRef
  • In vitro and in vivo activity of Melittin combined with imipenem and meropenem against carbapenem-resistant A. baumannii
    Demet Genç Karadenİz, Banu Kaskatepe, Şükran Öztürk, Meryem Güvenİr
    Future Microbiology.2025; : 1.     CrossRef
  • Green approaches for biofilm eradication: Enhancing cleaning efficiency
    Samah Mechmechani, Piyush Kumar Jha, Layal Karam, Heni Dallagi
    Journal of Food Safety.2024;[Epub]     CrossRef
  • Combined release of LL37 peptide and zinc ion from a mussel-inspired coating on porous titanium for infected bone defect repairing
    Yanni Zhang, Na Sun, Fangfang Hu, Wenhui Zhang, Qian Gao, Que Bai, Caiyun Zheng, Qiang Chen, Yong Han, Tingli Lu
    Colloids and Surfaces B: Biointerfaces.2024; 244: 114181.     CrossRef
  • Engineering Short Antimicrobial Peptides to Specifically Target Fusobacterium nucleatum in the Mixed Microbial Population
    Zhao Liu, Yijie Wang, Chen Zhang, Yongshuai Yang, Junfeng Zhang
    ACS Infectious Diseases.2024; 10(8): 3042.     CrossRef
  • Novel non-helical antimicrobial peptides insert into and fuse lipid model membranes
    Saheli Mitra, Bhairavi Chandersekhar, Yunshu Li, Mark Coopershlyak, Margot E. Mahoney, Brandt Evans, Rachel Koenig, Stephen C. L. Hall, Beate Klösgen, Frank Heinrich, Berthony Deslouches, Stephanie Tristram-Nagle
    Soft Matter.2024; 20(20): 4088.     CrossRef
  • Molecular characterization, antibacterial and immunoregulatory activities of liver-expressed antimicrobial peptide 2 in black rockfish, Sebastes schlegelii
    Min Zhang, Xue Yan, Chang-biao Wang, Wen-qing Liu, Yue Wang, Hao Jing, Bing Wang, Kai Yang, Zi-yue Chen, Yu-yu Luan, Guang-hua Wang
    Fish & Shellfish Immunology.2024; 147: 109467.     CrossRef
  • Local Drug Delivery Systems as Novel Approach for Controlling NETosis in Periodontitis
    Adina Bianca Boșca, Elena Dinte, Carmen Mihaela Mihu, Alina Elena Pârvu, Carmen Stanca Melincovici, Alina Simona Șovrea, Mariana Mărginean, Anne-Marie Constantin, Anida-Maria Băbțan, Alexandrina Muntean, Aranka Ilea
    Pharmaceutics.2024; 16(9): 1175.     CrossRef
  • Converging frontiers in cancer treatment: the role of nanomaterials, mesenchymal stem cells, and microbial agents—challenges and limitations
    Hamed Afkhami, Aref Yarahmadi, Shoroq Bostani, Nahid Yarian, Mahdieh Sadat Haddad, Shima Sadat Lesani, Seyed Soheil Aghaei, Mohammad Reza Zolfaghari
    Discover Oncology.2024;[Epub]     CrossRef
  • Efficacy of a mouthwash containing ε-poly-L-lysine, funme peptides and domiphen in reducing halitosis and supragingival plaque: a randomized clinical trial
    Song Shen, Xu Liu, Jun Huang, Yi Sun, Bin Liu, Wenzhu Song, Lei Meng, Mi Du, Qiang Feng
    BMC Oral Health.2024;[Epub]     CrossRef
  • Rational Design of Amphipathic Antimicrobial Peptides with Alternating L-/D-Amino Acids That Form Helical Structures
    Motoharu Hirano, Hidetomo Yokoo, Nobumichi Ohoka, Takahito Ito, Takashi Misawa, Makoto Oba, Takao Inoue, Yosuke Demizu
    Chemical and Pharmaceutical Bulletin.2024; 72(2): 149.     CrossRef
  • Synthetic Antimicrobial Peptides Fail to Induce Leucocyte Innate Immune Functions but Elicit Opposing Transcriptomic Profiles in European Sea Bass and Gilthead Seabream
    Laura Cervera, Elena Chaves-Pozo, Alberto Cuesta
    Marine Drugs.2024; 22(2): 86.     CrossRef
  • Three hepcidins from the spotted knifejaw (Oplegnathus punctatus) promote antimicrobial activity via TLR/NFκB pathway
    Jie Wang, Yadong Chen, Yu Song, Wenteng Xu, Wensheng Li, Wenhui Ma, Chuanjun Yang, Zhangfan Chen, Songlin Chen
    Fish & Shellfish Immunology.2024; 154: 109958.     CrossRef
  • Combating antibiotic resistance in a one health context: a plethora of frontiers
    Daniel Jesuwenu Ajose, Abimbola Olumide Adekanmbi, Nor Fadhilah Kamaruzzaman, Collins Njie Ateba, Shamsaldeen Ibrahim Saeed
    One Health Outlook.2024;[Epub]     CrossRef
  • A review on Diversity, Mechanism of Action and Evolutionary Significance of Antimicrobial Peptides
    Noor Muhammad, Waiza Ansar, Arif Ullah, Iram Liaqat, Zahid Nazir
    Futuristic Biotechnology.2024; : 02.     CrossRef
  • Protective effects of Chinese bayberry pomace wine against oxidative stress on Drosophila melanogaster
    Yanyun Zhu, Mengting Wang, Jingjing Zhu, Xiayin Zhang, Xingqian Ye, Jianchu Chen
    Food Research International.2024; 194: 114885.     CrossRef
  • In silico and physico-chemical characterization of cluster formation dynamics in peptide solutions
    Dimitar Kaynarov, Karina Marinova, Rossitsa Marinova, Peicho Petkov, Lyudmila Velkova, Aleksandar Dolashki, Petar Petrov, Leandar Litov, Elena Lilkova, Pavlina Dolashka, Nevena Ilieva
    Biochemistry and Biophysics Reports.2024; 39: 101753.     CrossRef
  • Chensinin-1b Alleviates DSS-Induced Inflammatory Bowel Disease by Inducing Macrophage Switching from the M1 to the M2 Phenotype
    Yue Sun, Huiyu Li, Xingpeng Duan, Xiaoxiao Ma, Chenxi Liu, Dejing Shang
    Biomedicines.2024; 12(2): 345.     CrossRef
  • Oral administration of anti-lipopolysaccharide factor isoform 3 via the bait microalga for controlling bacterial infection of Atlantic Bay scallop (Argopecten irradians)
    Yulin Cui, Ping Liu, Yaping Shao, Fengjie Sun, Qiaolei Wang, Hao Zhang, Yan Cheng, Zhengquan Gao
    Aquaculture Reports.2024; 39: 102430.     CrossRef
  • Mechanistic insights on the antibiofilm potential of snake venom peptides: An in silico based molecular docking approach
    Moupriya Nag
    Biocatalysis and Agricultural Biotechnology.2024; 61: 103351.     CrossRef
  • Antimicrobial Peptides and Their Biomedical Applications: A Review
    Ki Ha Min, Koung Hee Kim, Mi-Ran Ki, Seung Pil Pack
    Antibiotics.2024; 13(9): 794.     CrossRef
  • Nano-strategies used for combatting the scourge of tuberculosis infections
    Ren Fang, Yubao Jin, Weihao Kong, Hui Wang, Shuxian Wang, Xiaotian Li, Jiayin Xing, Yumiao Zhang, Xingyue Yang, Ningning Song
    Discover Immunity.2024;[Epub]     CrossRef
  • Antimicrobial Peptide Screening for Designing Custom Bactericidal Hydrogels
    Matthias Recktenwald, Muskanjot Kaur, Mohammed M. Benmassaoud, Aryanna Copling, Tulika Khanna, Michael Curry, Dennise Cortes, Gilbert Fleischer, Valerie J. Carabetta, Sebastián L. Vega
    Pharmaceutics.2024; 16(7): 860.     CrossRef
  • Hepcidin and dicentracin peptides show preventive antiviral applications against NNV infection in European sea bass through immunomodulatory roles
    Laura Cervera, Marta Arizcun, Luis Mercado, Elena Chaves-Pozo, Alberto Cuesta
    Aquaculture.2024; 583: 740592.     CrossRef
  • Natural Antimicrobial Peptides and Their Synthetic Analogues for Effective Oral Microflora Control and Oral Infection Treatment—The Role of Ceragenins in the Development of New Therapeutic Methods
    Michał Czarnowski, Urszula Wnorowska, Milena Łuckiewicz, Ewelina Dargiewicz, Jakub Spałek, Sławomir Okła, Beata Sawczuk, Paul B. Savage, Robert Bucki, Ewelina Piktel
    Pharmaceuticals.2024; 17(12): 1725.     CrossRef
  • A Novel Beta-Defensin Isoform from Malabar Trevally, Carangoides malabaricus (Bloch & Schneider, 1801), an Arsenal Against Fish Bacterial Pathogens: Molecular Characterization, Recombinant Production, and Mechanism of Action
    Athira P. P., Anju M. V., Anooja V. V., Archana K., Neelima S., Muhammed Musthafa S., I. S. Bright Singh, Rosamma Philip
    Marine Biotechnology.2024; 26(4): 696.     CrossRef
  • Daidzein‐Based Amphiphilic Small Molecular Antimicrobial Peptidomimetics as Novel Antimicrobial Agents with Anti‐Biofilm Activity
    Zijian Hong, Tsz Tin Yu, Muhammad Yasir, Manjulatha Sara, David StC Black, Mark DP Willcox, Rajesh Kuppusamy, Naresh Kumar
    ChemistrySelect.2024;[Epub]     CrossRef
  • Development strategies and application of antimicrobial peptides as future alternatives to in-feed antibiotics
    Qingping Liang, Zhemin Liu, Ziyu Liang, Changliang Zhu, Dongyu Li, Qing Kong, Haijin Mou
    Science of The Total Environment.2024; 927: 172150.     CrossRef
  • Functional interplay between short antimicrobial peptides and model lipid membranes
    Lorena Gratino, Marta Gogliettino, Marco Balestrieri, Alessandra Porritiello, Principia Dardano, Bruno Miranda, Rosa Luisa Ambrosio, Monica Ambrosio, Luigi Nicolais, Gianna Palmieri
    Bioorganic Chemistry.2024; 153: 107939.     CrossRef
  • Improving Photocleavage Efficiency of Photocleavable Protein for Antimicrobial Peptide Histatin 1 Expression
    Nana Zhou, Tai An, Yuan Zhang, Guomiao Zhao, Chao Wei, Xuemei Shen, Fan Li, Xiaoyan Wang
    Protein & Peptide Letters.2024; 31(2): 141.     CrossRef
  • In silico approach revealed the membrane receptor PHO36 as a new target for synthetic anticandidal peptides
    Francisco ES Lopes, Pedro FN Souza, Daiane MS Brito, Felipe P Mesquita, Raquel C Montenegro, Jackson L Amaral, José HA Filho, Valder N Freire, Rossana A Cordeiro
    Future Microbiology.2024; 19(17): 1463.     CrossRef
  • Interaction of designed cationic antimicrobial peptides with the outer membrane of gram-negative bacteria
    Shelley He, Charles M. Deber
    Scientific Reports.2024;[Epub]     CrossRef
  • Artificial Intelligence-Based Model for Predicting the Minimum Inhibitory Concentration of Antibacterial Peptides Against ESKAPEE Pathogens
    Ritesh Sharma, Sameer Shrivastava, Sanjay Kumar Singh, Abhinav Kumar, Amit Kumar Singh, Sonal Saxena
    IEEE Journal of Biomedical and Health Informatics.2024; 28(4): 1949.     CrossRef
  • Synergistic peptide combinations designed to suppress SARS-CoV-2
    Tao Han, Linhong Song, Xinxin Niu, Meng Qiu, Yi Wang, Jing Wang, Xiuyan Sun, Jiali Ma, Siqi Hu, Zhichun Feng
    Heliyon.2024; 10(9): e30489.     CrossRef
  • Synthesis and Biological Studies of New Temporin A Analogs Containing Unnatural Amino Acids in Position 7
    Dilyana Dimitrova, Veronica Nemska, Tsvetelina Foteva, Ivan Iliev, Nelly Georgieva, Dancho Danalev
    Pharmaceutics.2024; 16(6): 716.     CrossRef
  • PACAP sequence modifications modulate the peptide antimicrobial activity against bacterial pathogens affecting aquaculture
    Laura Rivera Méndez, Tania Rodríguez-Cornejo, Tania Rodríguez-Ramos, Lowia Al-Hussinee, Janet Velázquez, James Hugh Campbell, Yamila Carpio, Mario Pablo Estrada, Brian Dixon
    Fish & Shellfish Immunology.2024; 148: 109512.     CrossRef
  • Antimicrobial and immunomodulatory activities of porcine cathelicidin Protegrin-1
    Ali Javed, Trishana Oedairadjsingh, Irene S. Ludwig, Thomas M. Wood, Nathaniel I. Martin, Femke Broere, Markus H. Weingarth, Edwin J.A. Veldhuizen
    Molecular Immunology.2024; 173: 100.     CrossRef
  • Antimicrobial Peptides: Sources, Expression Systems, and Applications
    Mengru Li, Weitao Lu, Yanyan Sun, Chunming Dong
    Current Protein & Peptide Science.2023; 24(8): 640.     CrossRef
  • Operative Management of Burns: Traditional Care
    David G. Greenhalgh
    European Burn Journal.2023; 4(2): 262.     CrossRef
  • Antimicrobial Peptides
    Noorul Samsoon Maharifa Haja Mohaideen, S. Vaani, S. Hemalatha
    Current Pharmacology Reports.2023; 9(6): 433.     CrossRef
  • Advances in Research on Titanium and Titanium Alloys with Antibacterial Functionality for Medical Use—A Review
    Yong Shen, Zhankui Jin, Ming Ling, Zhengming Sun, Min Feng, Cuixiang Xu, Shizhang Liu
    Journal of Biomaterials and Tissue Engineering.2023; 13(1): 1.     CrossRef
  • An active domain SA-2 derived from cystatin-SA, and its antifungal activity
    Xiaoyun Liu, Xiaowei Huang, Jian Wang, Meina Zhang, Mengyuan Liu, Changlin Zhou, Lingman Ma
    Amino Acids.2023; 55(1): 101.     CrossRef
  • Diversity of Bioinspired Hydrogels: From Structure to Applications
    Alexandra Lupu, Luiza Madalina Gradinaru, Vasile Robert Gradinaru, Maria Bercea
    Gels.2023; 9(5): 376.     CrossRef
  • Bioactive peptides derived from fermented foods: Preparation and biological activities
    Qingyan Guo, Pengfei Chen, Xianggui Chen
    Journal of Functional Foods.2023; 101: 105422.     CrossRef
  • Anti-microbial Peptides against Methicillin-resistant Staphylococcus aureus: Promising Therapeutics
    Priyanka Sinoliya, Pooran Singh Solanki, Sakshi Piplani, Ravi Ranjan Kumar Niraj, Vinay Sharma
    Current Protein & Peptide Science.2023; 24(2): 156.     CrossRef
  • Natural and synthetic peptides in antimicrobial therapy
    Karina A. Khlystova, Narine G. Sarkisyan, Natalia N. Kataeva
    Russian Journal of Immunology.2023; 26(2): 105.     CrossRef
  • Biomimetic antimicrobial polymers—Design, characterization, antimicrobial, and novel applications
    Haruko Takahashi, Iva Sovadinova, Kazuma Yasuhara, Satyavani Vemparala, Gregory A. Caputo, Kenichi Kuroda
    WIREs Nanomedicine and Nanobiotechnology.2023;[Epub]     CrossRef
  • Antimicrobial peptides: Structure, mechanism, and modification
    Na Chen, Cheng Jiang
    European Journal of Medicinal Chemistry.2023; 255: 115377.     CrossRef
  • Repairing the intestinal mucosal barrier of traditional Chinese medicine for ulcerative colitis: a review
    Yichen Zong, Jie Meng, Tangyou Mao, Qiang Han, Peng Zhang, Lei Shi
    Frontiers in Pharmacology.2023;[Epub]     CrossRef
  • Advancements, challenges and future perspectives on peptide-based drugs: Focus on antimicrobial peptides
    Xiaofang Luo, Huifang Chen, Yannan Song, Zuodong Qin, Lijian Xu, Nongyue He, Yimin Tan, Wubliker Dessie
    European Journal of Pharmaceutical Sciences.2023; 181: 106363.     CrossRef
  • Therapeutic Prospection of Animal Venoms-Derived Antimicrobial Peptides against Infections by Multidrug-Resistant Acinetobacter baumannii: A Systematic Review of Pre-Clinical Studies
    William Gustavo Lima, Maria Elena de Lima
    Toxins.2023; 15(4): 268.     CrossRef
  • Antimicrobial Efficacy and Prevalence of Microcins: Low Molecular Mass Bacteriocins Produced by Escherichia coli
    Farzaneh Mohammadzadeh Rostami, Sharareh Moghim, Saeid Javdan, Bahram Nasr Esfahani
    International Journal of Peptide Research and Therapeutics.2023;[Epub]     CrossRef
  • Chiral-engineered supraparticles: Emerging tools for drug delivery
    Mahfoozur Rahman, Waleed H. Almalki, Obaid Afzal, Abdulmalik Saleh Alfawaz Altamimi, Shehla Nasar Mir Najib Ullah, Md. Abul Barkat, Sarwar Beg
    Drug Discovery Today.2023; 28(1): 103420.     CrossRef
  • In Vitro Biological Evaluation and Mechanism of Action of Peptoid Analogue Based on Cationic, Amphipathic Peptide A-12
    Lalita Sharma, Gopal Singh Bisht
    International Journal of Peptide Research and Therapeutics.2023;[Epub]     CrossRef
  • Recombinant production of human antimicrobial peptide LL- 37 and its secondary structure
    Antonín Pavelka, Lukáš Vacek, Adam Norek, Šárka Kobzová, Lubomír Janda
    Biologia.2023; 79(1): 263.     CrossRef
  • Synergistic Effect, Improved Cell Selectivity, and Elucidating the Action Mechanism of Antimicrobial Peptide YS12
    Suzia Aktar Suchi, Dae Young Lee, Young Kyun Kim, Seong Soo Kang, Tahmina Bilkis, Jin Cheol Yoo
    International Journal of Molecular Sciences.2023; 24(17): 13522.     CrossRef
  • Dual-action potential of cationic cryptides against infections and cancers
    Amr A.A. Abd El-Aal, Fairen A. Jayakumar, Kavita Reginald
    Drug Discovery Today.2023; 28(11): 103764.     CrossRef
  • Natural Amphibian-Derived Host Defense Peptides: Peptide Immunomodulators with Potential Therapeutic Value
    Jie Shi, Jing Wu, Guizhu Feng, Hailong Yang, Lixian Mu
    Protein & Peptide Letters.2023; 30(7): 562.     CrossRef
  • Self-assembled and Zn(II)-coordinated dipeptide nanoparticles with membrane-rupturing action on bacteria
    Shahzad Anwar, Muhammad Babar Khawar, Ali Afzal, Muhammad Ovais, Zhang Xiang
    Applied Microbiology and Biotechnology.2023; 107(18): 5775.     CrossRef
  • Therapeutic Peptides for Treatment of Lung Diseases: Infection, Fibrosis, and Cancer
    Shujiao Li, Yuying Li, Ying Liu, Yifan Wu, Qiuyu Wang, Lili Jin, Dianbao Zhang
    International Journal of Molecular Sciences.2023; 24(10): 8642.     CrossRef
  • The biological role of charge distribution in linear antimicrobial peptides
    Harry Morales Duque, Gisele Rodrigues, Lucas Souza Santos, Octávio Luiz Franco
    Expert Opinion on Drug Discovery.2023; 18(3): 287.     CrossRef
  • Colitis-Mediated Dysbiosis of the Intestinal Flora and Impaired Vitamin A Absorption Reduce Ovarian Function in Mice
    Ze Li, Chengzhen Chen, Wenjie Yu, Lingxia Xu, Haitao Jia, Chen Wang, Na Pei, Zibin Liu, Dan Luo, Jun Wang, Wenfa Lv, Bao Yuan, Jiabao Zhang, Hao Jiang
    Nutrients.2023; 15(11): 2425.     CrossRef
  • Insect Meals and Insect Antimicrobial Peptides as an Alternative for Antibiotics and Growth Promoters in Livestock Production
    Ewelina Patyra, Krzysztof Kwiatek
    Pathogens.2023; 12(6): 854.     CrossRef
  • Simultaneous control of infection and inflammation with keratin-derived antibacterial peptides targeting TLRs and co-receptors
    Yan Sun, Jonathan Chan, Karthikeyan Bose, Connie Tam
    Science Translational Medicine.2023;[Epub]     CrossRef
  • Structural Characterization, Functional Profiling, and Mechanism Study of Four Antimicrobial Peptides for Antibacterial and Anticancer Applications
    Zihuayuan Yang, Jie Zhang, Fu-Gen Wu, Fengming Lin
    Langmuir.2023; 39(6): 2161.     CrossRef
  • Enhancement of hypericin nanoparticle-mediated sonoinduced disruption of biofilm and persister cells of Streptococcus mutans by dermcidin-derived peptide DCD-1L
    Maryam Pourhajibagher, Steven Parker, Babak Pourakbari, Nasrin Keshavarz Valian, Reza Raoofian, Abbas Bahador
    Photodiagnosis and Photodynamic Therapy.2023; 41: 103308.     CrossRef
  • Biomimetic AgNPs@antimicrobial peptide/silk fibroin coating for infection-trigger antibacterial capability and enhanced osseointegration
    Wenhao Zhou, Tian Bai, Lan Wang, Yan Cheng, Dandan Xia, Sen Yu, Yufeng Zheng
    Bioactive Materials.2023; 20: 64.     CrossRef
  • Preparation, Purification and Characterization of Antibacterial and ACE Inhibitory Peptides from Head Protein Hydrolysate of Kuruma Shrimp, Marsupenaeus japonicus
    Jie Zhou, Qiuyu Han, Tomoyuki Koyama, Shoichiro Ishizaki
    Molecules.2023; 28(2): 894.     CrossRef
  • Brevicillin, a novel lanthipeptide from the genusBrevibacilluswith antimicrobial, antifungal, and antiviral activity
    Shelley Sardul Singh, Deepika Sharma, Charandeep Singh, Sahil Kumar, Prashant Singh, Anshul Sharma, Deepjyoti Kumar Das, Anil Kumar Pinnaka, Krishan Gopal Thakur, Rajesh P Ringe, Suresh Korpole
    Journal of Applied Microbiology.2023;[Epub]     CrossRef
  • Fungicidal activity of human antimicrobial peptides and their synergistic interaction with common antifungals against multidrug-resistant Candida auris
    Siham Shaban, Mrudula Patel, Aijaz Ahmad
    International Microbiology.2022; 26(2): 165.     CrossRef
  • Aptamer Decorated Emodin Nanoparticles-Assisted Delivery of Dermcidin-Derived Peptide DCD-1L: Photoactive Bio-Theragnostic Agent for Enterococcus Faecalis Biofilm Destruction
    Maryam Pourhajibagher, Abbas Bahador
    SSRN Electronic Journal .2022;[Epub]     CrossRef
  • Aptamer decorated emodin nanoparticles-assisted delivery of dermcidin-derived peptide DCD-1L: Photoactive bio-theragnostic agent for Enterococcus faecalis biofilm destruction
    Maryam Pourhajibagher, Abbas Bahador
    Photodiagnosis and Photodynamic Therapy.2022; 39: 103020.     CrossRef
  • Production of Antimicrobial Peptides (Cathelicidin Analogues) and Evaluation of Their Biological Properties
    V. A. Gasanov, E. A. Vorotelyak, A. V. Vasiliev
    Biology Bulletin.2022; 49(S2): S148.     CrossRef
  • Progress in Alternative Strategies to Combat Antimicrobial Resistance: Focus on Antibiotics
    Jayaseelan Murugaiyan, P. Anand Kumar, G. Srinivasa Rao, Katia Iskandar, Stephen Hawser, John P. Hays, Yara Mohsen, Saranya Adukkadukkam, Wireko Andrew Awuah, Ruiz Alvarez Maria Jose, Nanono Sylvia, Esther Patience Nansubuga, Bruno Tilocca, Paola Roncada,
    Antibiotics.2022; 11(2): 200.     CrossRef
  • Strategies for improving antimicrobial peptide production
    Soumya Deo, Kristi L. Turton, Tajinder Kainth, Ayush Kumar, Hans-Joachim Wieden
    Biotechnology Advances.2022; 59: 107968.     CrossRef
  • Riemerella anatipestifer T9SS Effector SspA Functions in Bacterial Virulence and Defending Natural Host Immunity
    Zongchao Chen, Pengfei Niu, Xiaomei Ren, Wenlong Han, Ruyu Shen, Min Zhu, Yang Yu, Chan Ding, Shengqing Yu, Martha Vives
    Applied and Environmental Microbiology.2022;[Epub]     CrossRef
  • Antibacterial and Antibiofilm Activities of Novel Cyclic Peptides against Methicillin-Resistant Staphylococcus aureus
    Guoxing Wei, Yun He
    International Journal of Molecular Sciences.2022; 23(14): 8029.     CrossRef
  • Effect of Flagellin Pre-Exposure on the Inflammatory and Antifungal Response of Bronchial Epithelial Cells to Fungal Pathogens
    Jeanne Bigot, Manon Ruffin, Juliette Guitard, Sandra Vellaissamy, Sophie Thorez, Harriet Corvol, Loïc Guillot, Viviane Balloy, Christophe Hennequin
    Journal of Fungi.2022; 8(12): 1268.     CrossRef
  • Gold nanoparticle-DNA aptamer-assisted delivery of antimicrobial peptide effectively inhibits Acinetobacter baumannii infection in mice
    Jaeyeong Park, Eunkyoung Shin, Ji-Hyun Yeom, Younkyung Choi, Minju Joo, Minho Lee, Je Hyeong Kim, Jeehyeon Bae, Kangseok Lee
    Journal of Microbiology.2022; 60(1): 128.     CrossRef
  • Antimicrobial peptides (AMPs): A promising class of antimicrobial compounds
    Mine Erdem Büyükkiraz, Zülal Kesmen
    Journal of Applied Microbiology.2022; 132(3): 1573.     CrossRef
  • Novel Insights into Fungal Infections Prophylaxis and Treatment in Pediatric Patients with Cancer
    Gianluca Bossù, Riccardo Di Sario, Edoardo Muratore, Davide Leardini, Andrea Pession, Susanna Esposito, Riccardo Masetti
    Antibiotics.2022; 11(10): 1316.     CrossRef
  • Pathogen-Specific Bactericidal Method Mediated by Conjugative Delivery of CRISPR-Cas13a Targeting Bacterial Endogenous Transcripts
    Zihao Song, Yue Yu, Xinpeng Bai, Yiguo Jia, Jiayi Tian, Kui Gu, Mengyu Zhao, Changyu Zhou, Xiangyu Zhang, Hongning Wang, Yizhi Tang, Sandeep Tamber
    Microbiology Spectrum.2022;[Epub]     CrossRef
  • Role of lipopolysaccharide in antimicrobial and cell penetrating peptide membrane interactions probed by deuterium NMR of whole cells
    Sarika Kumari, Michael R. Morrow, Valerie Booth
    BBA Advances.2022; 2: 100057.     CrossRef
  • Multidrug-Resistant Microbial Therapy Using Antimicrobial Peptides and the CRISPR/Cas9 System
    Yared Abate Getahun, Destaw Asfaw Ali, Bihonegn Wodajnew Taye, Yismaw Alemie Alemayehu
    Veterinary Medicine: Research and Reports.2022; Volume 13: 173.     CrossRef
  • Pulmonary surfactant and drug delivery: Vehiculization of a tryptophan-tagged antimicrobial peptide over the air-liquid interfacial highway
    Cristina García-Mouton, Elisa Parra-Ortiz, Martin Malmsten, Antonio Cruz, Jesús Pérez-Gil
    European Journal of Pharmaceutics and Biopharmaceutics.2022; 180: 33.     CrossRef
  • Production of antimicrobial peptide arasin-like Sp in Escherichia coli via an ELP-intein self-cleavage system
    Xiu Li, Yu Jiang, Ying Lin
    Journal of Biotechnology.2022; 347: 49.     CrossRef
  • Review and perspective on bioactive peptides: A roadmap for research, development, and future opportunities
    Zhenjiao Du, Yonghui Li
    Journal of Agriculture and Food Research.2022; 9: 100353.     CrossRef
  • Human Antimicrobial Peptide Triggered Colloidal Transformations in Bacteria Membrane Lipopolysaccharides
    Linda Hong, Mark Gontsarik, Heinz Amenitsch, Stefan Salentinig
    Small.2022;[Epub]     CrossRef
  • Combination of Six Individual Derivatives of the Pom-1 Antibiofilm Peptide Doubles Their Efficacy against Invasive and Multi-Resistant Clinical Isolates of the Pathogenic Yeast Candida albicans
    Michelle Häring, Valerie Amann, Ann-Kathrin Kissmann, Tilmann Herberger, Christopher Synatschke, Nicole Kirsch-Pietz, Julio A. Perez-Erviti, Anselmo J. Otero-Gonzalez, Fidel Morales-Vicente, Jakob Andersson, Tanja Weil, Steffen Stenger, Armando Rodríguez,
    Pharmaceutics.2022; 14(7): 1332.     CrossRef
  • Pathophysiological Effects of Lycosa erythrognatha Derived Peptide LyeTxI-b on RKO-AS-45-1 Colorectal Carcinoma Cell Line Using the Chicken Chorioallantoic Membrane Model
    Carolina Nunes da Silva, Lays Fernanda Nunes Dourado, Luciana Maria Silva, Aline Brito de Lima, Maria Elena de Lima, Armando Silva-Cunha, Silvia Ligório Fialho
    International Journal of Peptide Research and Therapeutics.2022;[Epub]     CrossRef
  • Effect of a monovalent salt on the energetics of an antimicrobial-peptide: micelle dissociation
    Suvankar Ghosh, Sunanda Chatterjee, Priyadarshi Satpati
    Physical Chemistry Chemical Physics.2022; 24(38): 23669.     CrossRef
  • Synthetic Amphipathic β-Sheet Temporin-Derived Peptide with Dual Antibacterial and Anti-Inflammatory Activities
    Rosa Bellavita, Elisabetta Buommino, Bruno Casciaro, Francesco Merlino, Floriana Cappiello, Noemi Marigliano, Anella Saviano, Francesco Maione, Rosaria Santangelo, Maria Luisa Mangoni, Stefania Galdiero, Paolo Grieco, Annarita Falanga
    Antibiotics.2022; 11(10): 1285.     CrossRef
  • Effect of Leu/Val Mutation on the Energetics of Antimicrobial Peptide:Micelle Binding
    Suvankar Ghosh, Sunanda Chatterjee, Priyadarshi Satpati
    The Journal of Physical Chemistry B.2022; 126(28): 5262.     CrossRef
  • Alternatives Therapeutic Approaches to Conventional Antibiotics: Advantages, Limitations and Potential Application in Medicine
    Hiba Alaoui Mdarhri, Rachid Benmessaoud, Houda Yacoubi, Lina Seffar, Houda Guennouni Assimi, Mouhsine Hamam, Rihabe Boussettine, Najoie Filali-Ansari, Fatima Azzahra Lahlou, Idrissa Diawara, Moulay Mustapha Ennaji, Mohamed Kettani-Halabi
    Antibiotics.2022; 11(12): 1826.     CrossRef
  • Antimicrobial peptides: natural or synthetic defense peptides against HBV and HCV infections
    Masoud Keikha, Hossein Kamali, Kiarash Ghazvini, Mohsen Karbalaei
    VirusDisease.2022; 33(4): 445.     CrossRef
  • Immune Activated Cellular Therapy for Drug Resistant Infections: Rationale, Mechanisms, and Implications for Veterinary Medicine
    Lynn M. Pezzanite, Lyndah Chow, Alyssa Strumpf, Valerie Johnson, Steven W. Dow
    Veterinary Sciences.2022; 9(11): 610.     CrossRef
  • In Vitro Antibacterial Effects of the Chimeric Peptides from Chicken and Pig Antimicrobial Peptide NK-Lysin
    Yeojin Hong, Gi Yong Lee, Soo-Jin Yang, Hyun Soon Lillehoj, Yeong Ho Hong
    Korean Journal of Poultry Science.2022; 49(2): 69.     CrossRef
  • High Level Expression and Purification of Cecropin-like Antimicrobial Peptides in Escherichia coli
    Chih-Lung Wu, Ya-Han Chih, Hsin-Ying Hsieh, Kuang-Li Peng, Yi-Zong Lee, Bak-Sau Yip, Shih-Che Sue, Jya-Wei Cheng
    Biomedicines.2022; 10(6): 1351.     CrossRef
  • The antimicrobial peptides LL-37, KR-20, FK-13 and KR-12 inhibit the growth of a sensitive and a metronidazole-resistant strain of Trichomonas vaginalis
    María G. Ramírez-Ledesma, Mayra C. Rodríguez, Nayeli Alva-Murillo, Eva E. Avila
    Parasitology Research.2022; 121(12): 3503.     CrossRef
  • Fabrication of an Antimicrobial Peptide-Loaded Silk Fibroin/Gelatin Bilayer Sponge to Apply as a Wound Dressing; An In Vitro Study
    Milad Chizari, Sadjad Khosravimelal, Hamid Tebyaniyan, Mehrdad Moosazadeh Moghaddam, Mazaher Gholipourmalekabadi
    International Journal of Peptide Research and Therapeutics.2022;[Epub]     CrossRef
  • Interaction of a short antimicrobial peptide on charged lipid bilayer: A case study on aurein 1.2 peptide
    Shuo Qian, Piotr A. Zolnierczuk
    BBA Advances.2022; 2: 100045.     CrossRef
  • The Role of Intestinal Mucosal Barrier in Autoimmune Disease: A Potential Target
    Jia An, Yuqing Liu, Yiqi Wang, Ru Fan, Xiaorong Hu, Fen Zhang, Jinhua Yang, Junwei Chen
    Frontiers in Immunology.2022;[Epub]     CrossRef
  • Effect of C‐terminal and N‐terminal dimerization and alanine scanning on antibacterial activity of the analogs of the peptide p‐BthTX‐I
    Norival Alves Santos‐Filho, Gabriela Marinho Righetto, Marina Rodrigues Pereira, Julia Pinto Piccoli, Larissa Mathias Teizen Almeida, Thainá Cristina Leal, Ilana Lopes Baratella Cunha Camargo, Eduardo Maffud Cilli
    Peptide Science.2022;[Epub]     CrossRef
  • Ramosin: The First Antibacterial Peptide Identified on Bolitoglossa ramosi Colombian Salamander
    Laura Medina, Fanny Guzmán, Claudio Álvarez, Jean Paul Delgado, Belfran Carbonell-M
    Pharmaceutics.2022; 14(12): 2579.     CrossRef
  • Bioactive Antimicrobial Peptides: A New Weapon to Counteract Zoonosis
    Luisa Zupin, Carlos André dos Santos-Silva, Aya R. Hamad Al Mughrbi, Livia Maria Batista Vilela, Ana Maria Benko-Iseppon, Sergio Crovella
    Microorganisms.2022; 10(8): 1591.     CrossRef
  • Antimicrobial Peptide Mechanisms Studied by Whole-Cell Deuterium NMR
    Sarika Kumari, Valerie Booth
    International Journal of Molecular Sciences.2022; 23(5): 2740.     CrossRef
  • In silico screening and characterization of novel natural peptides as spike protein inhibitors of novel coronavirus (severe acute respiratory syndrome coronavirus 2)
    Raghunath Satpathy, Namrata Dash
    Journal of Preventive, Diagnostic and Treatment Strategies in Medicine.2022; 1(1): 54.     CrossRef
  • Key Physicochemical Determinants in the Antimicrobial Peptide RiLK1 Promote Amphipathic Structures
    Lucia Falcigno, Gabriella D’Auria, Gianna Palmieri, Marta Gogliettino, Bruna Agrillo, Rosarita Tatè, Principia Dardano, Luigi Nicolais, Marco Balestrieri
    International Journal of Molecular Sciences.2021; 22(18): 10011.     CrossRef
  • Cytotoxicity and antimicrobial activity of synthetic peptides alone or in combination with conventional antimicrobials against fish pathogenic bacteria
    I.M. Assane, N.A. Santos‐Filho, E.L. Sousa, M.C.O. Arruda Brasil, E.M. Cilli, F. Pilarski
    Journal of Applied Microbiology.2021; 131(4): 1762.     CrossRef
  • Integrating Porphyrinic Metal-Organic Frameworks in Nanofibrous Carrier for Photodynamic Antimicrobial Application
    Huiru Zhang, Zhihao Xu, Ying Mao, Yingjie Zhang, Yan Li, Jihong Lao, Lu Wang
    Polymers.2021; 13(22): 3942.     CrossRef
  • Metal–Organic-Framework-Based Materials for Antimicrobial Applications
    Rui Li, Tongtong Chen, Xiangliang Pan
    ACS Nano.2021; 15(3): 3808.     CrossRef
  • Polyphenylglyoxamide-Based Amphiphilic Small Molecular Peptidomimetics as Antibacterial Agents with Anti-Biofilm Activity
    Tsz Tin Yu, Rajesh Kuppusamy, Muhammad Yasir, Md. Musfizur Hassan, Manjulatha Sara, Junming Ho, Mark D. P. Willcox, David StC. Black, Naresh Kumar
    International Journal of Molecular Sciences.2021; 22(14): 7344.     CrossRef
  • Initial purification of antimicrobial fermentation metabolites from Paecilomyces cicadae and its antimicrobial mechanism
    Qi-Wen Cen, Zheng-Yun Wang, Zhen-Xing Tang, Yu Zhang, Tao Chen, Da-Wei Xue, Ming-Feng Xu, Xue-Lian Bai, Ting Zhou, Lu-E Shi
    LWT.2021; 148: 111785.     CrossRef
  • Deep-ABPpred: identifying antibacterial peptides in protein sequences using bidirectional LSTM with word2vec
    Ritesh Sharma, Sameer Shrivastava, Sanjay Kumar Singh, Abhinav Kumar, Sonal Saxena, Raj Kumar Singh
    Briefings in Bioinformatics.2021;[Epub]     CrossRef
  • Cutaneous Neuroimmune Interactions in Peripheral Neuropathic Pain States
    Daniel B. Lowy, Preet G. S. Makker, Gila Moalem-Taylor
    Frontiers in Immunology.2021;[Epub]     CrossRef
  • New Perspectives on Old and New Therapies of Staphylococcal Skin Infections: The Role of Biofilm Targeting in Wound Healing
    Oriana Simonetti, Giulio Rizzetto, Giulia Radi, Elisa Molinelli, Oscar Cirioni, Andrea Giacometti, Annamaria Offidani
    Antibiotics.2021; 10(11): 1377.     CrossRef
  • Antimicrobial peptides: mechanism of action, activity and clinical potential
    Qi-Yu Zhang, Zhi-Bin Yan, Yue-Ming Meng, Xiang-Yu Hong, Gang Shao, Jun-Jie Ma, Xu-Rui Cheng, Jun Liu, Jian Kang, Cai-Yun Fu
    Military Medical Research.2021;[Epub]     CrossRef
  • Trends in peptide drug discovery
    Markus Muttenthaler, Glenn F. King, David J. Adams, Paul F. Alewood
    Nature Reviews Drug Discovery.2021; 20(4): 309.     CrossRef
  • Atomic-engineering Au-Ag nanoalloys for screening antimicrobial agents with low toxicity towards mammalian cells
    Zi Lin, Yao Luo, Pengfei Liu, Yanjun Li, Jun Yue, Lelun Jiang
    Colloids and Surfaces B: Biointerfaces.2021; 204: 111831.     CrossRef
  • Discovery, Optimization, and Clinical Application of Natural Antimicrobial Peptides
    Armando A. Rodríguez, Anselmo Otero-González, Maretchia Ghattas, Ludger Ständker
    Biomedicines.2021; 9(10): 1381.     CrossRef
  • Expression of antimicrobial peptide Cecropin P1 in Saccharomyces cerevisiae and its antibacterial and antiviral activity in vitro
    Ruijiao Jiang, Pengfei Zhang, Xulong Wu, Yin Wang, Tayyab Rehman, Xueping Yao, Yan Luo, Zexiao Yang
    Electronic Journal of Biotechnology.2021; 50: 16.     CrossRef
  • Structure–activity relationship study of amphipathic antimicrobial peptides using helix‐destabilizing sarcosine
    Hidetomo Yokoo, Motoharu Hirano, Nobumichi Ohoka, Takashi Misawa, Yosuke Demizu
    Journal of Peptide Science.2021;[Epub]     CrossRef
  • The barrier beyond the skin
    Elisa MOLITERNI, Giovanni PAOLINO, Antonio G. RICHETTA, Sara GRASSI, Stefano CALVIERI
    Italian Journal of Dermatology and Venereology.2021;[Epub]     CrossRef
  • Plant Antimicrobial Peptides as Potential Tool for Topic Treatment of Hidradenitis Suppurativa
    Carlos André dos Santos-Silva, Paola Maura Tricarico, Lívia Maria Batista Vilela, Ricardo Salas Roldan-Filho, Vinícius Costa Amador, Adamo Pio d’Adamo, Mireli de Santana Rêgo, Ana Maria Benko-Iseppon, Sergio Crovella
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Short communication: Algicide activity of antimicrobial peptides compounds against Prototheca bovis
    V.R. Sperotto, L.B. Denardi, C. Weiblen, F.P.K. de Jesus, M.R. Dorneles, L.B. Ianiski, J.M. Santurio
    Journal of Dairy Science.2021; 104(3): 3554.     CrossRef
  • β-Defensins from common goby (Pomatoschistus microps) and silver trevally (Pseudocaranx georgianus): Molecular characterization and phylogenetic analysis
    K. L. Dhanya Lenin, Rajeswary Vasu Iyer, Athira Raveendran, M. V. Anju, Rosamma Philip, Swapna P. Antony
    Molecular Biology Reports.2021; 48(5): 4943.     CrossRef
  • Impact of the Peptide WMR-K on Dual-Species Biofilm Candida albicans/Klebsiella pneumoniae and on the Untargeted Metabolomic Profile
    Emilia Galdiero, Maria Michela Salvatore, Angela Maione, Federica Carraturo, Stefania Galdiero, Annarita Falanga, Anna Andolfi, Francesco Salvatore, Marco Guida
    Pathogens.2021; 10(2): 214.     CrossRef
  • Peptides and Dendrimers: How to Combat Viral and Bacterial Infections
    Annarita Falanga, Valentina Del Genio, Stefania Galdiero
    Pharmaceutics.2021; 13(1): 101.     CrossRef
  • Antimicrobial peptides and their application in food packaging
    Yaowen Liu, Dur E. Sameen, Saeed Ahmed, Jianwu Dai, Wen Qin
    Trends in Food Science & Technology.2021; 112: 471.     CrossRef
  • Mechanistic Understanding from Molecular Dynamics in Pharmaceutical Research 2: Lipid Membrane in Drug Design
    Tomasz Róg, Mykhailo Girych, Alex Bunker
    Pharmaceuticals.2021; 14(10): 1062.     CrossRef
  • Structural Diversity using Hyp “Customizable Units”: Proof‐of‐Concept Synthesis of Sansalvamide‐Related Antitumoral Peptides
    Fernando Cuevas, Carlos J. Saavedra, Ivan Romero‐Estudillo, Alicia Boto, Mario Ordóñez, Irene Vergara
    European Journal of Organic Chemistry.2021; 2021(6): 933.     CrossRef
  • Therapeutic Strategies To Counteract Antibiotic Resistance in MRSA Biofilm‐Associated Infections
    Stella Cascioferro, Daniela Carbone, Barbara Parrino, Camilla Pecoraro, Elisa Giovannetti, Girolamo Cirrincione, Patrizia Diana
    ChemMedChem.2021; 16(1): 65.     CrossRef
  • Uncoupling Amphipathicity and Hydrophobicity: Role of Charge Clustering in Membrane Interactions of Cationic Antimicrobial Peptides
    Shelley He, Tracy A. Stone, Charles M. Deber
    Biochemistry.2021; 60(34): 2586.     CrossRef
  • Preferential binding affinity of ions and their effect on structure and dynamics of water near antimicrobial peptide
    Omkar Singh, Debashree Chakraborty
    Journal of Molecular Liquids.2021; 344: 117789.     CrossRef
  • Synthesis and Antibacterial Activity of Cationic Amino Acid-Conjugated Dendrimers Loaded with a Mixture of Two Triterpenoid Acids
    Anna Maria Schito, Gian Carlo Schito, Silvana Alfei
    Polymers.2021; 13(4): 521.     CrossRef
  • Recent Advances and Challenges in Nanodelivery Systems for Antimicrobial Peptides (AMPs)
    Ziyan Tang, Quantao Ma, Xiaoling Chen, Tianbao Chen, Yuan Ying, Xinping Xi, Lei Wang, Chengbang Ma, Chris Shaw, Mei Zhou
    Antibiotics.2021; 10(8): 990.     CrossRef
  • Rediscovery of antimicrobial peptides as therapeutic agents
    Minkyung Ryu, Jaeyeong Park, Ji-Hyun Yeom, Minju Joo, Kangseok Lee
    Journal of Microbiology.2021; 59(2): 113.     CrossRef
  • Microfluidic Tools for Enhanced Characterization of Therapeutic Stem Cells and Prediction of Their Potential Antimicrobial Secretome
    Pasquale Marrazzo, Valeria Pizzuti, Silvia Zia, Azzurra Sargenti, Daniele Gazzola, Barbara Roda, Laura Bonsi, Francesco Alviano
    Antibiotics.2021; 10(7): 750.     CrossRef
  • Chiral self-assembly of peptides: Toward the design of supramolecular polymers with enhanced chemical and biological functions
    Yuhe Shen, Yuefei Wang, Ian W. Hamley, Wei Qi, Rongxin Su, Zhimin He
    Progress in Polymer Science.2021; 123: 101469.     CrossRef
  • Amphiphilic polymer therapeutics: an alternative platform in the fight against antibiotic resistant bacteria
    Haruko Takahashi, Gregory A. Caputo, Kenichi Kuroda
    Biomaterials Science.2021; 9(8): 2758.     CrossRef
  • Self-Assembly Pathways and Antimicrobial Properties of Lysozyme in Different Aggregation States
    Nico Kummer, Tingting Wu, Kevin J. De France, Flavia Zuber, Qun Ren, Peter Fischer, Silvia Campioni, Gustav Nyström
    Biomacromolecules.2021; 22(10): 4327.     CrossRef
  • Effect of Non-natural Hydrophobic Amino Acids on the Efficacy and Properties of the Antimicrobial Peptide C18G
    Morgan A. Hitchner, Matthew R. Necelis, Devanie Shirley, Gregory A. Caputo
    Probiotics and Antimicrobial Proteins.2021; 13(2): 527.     CrossRef
  • Apoptosis-induction effect of ε-poly-lysine against Staphylococcus aureus and its application on pasteurized milk
    Hou-Qi Ning, Ying-Qiu Li, Hong Lin, Jing-Xue Wang
    LWT.2021; 137: 110493.     CrossRef
  • Marine Invertebrate Peptides: Antimicrobial Peptides
    Ran Wu, Jiri Patocka, Eugenie Nepovimova, Patrik Oleksak, Martin Valis, Wenda Wu, Kamil Kuca
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Generation of antimicrobial peptides Leg1 and Leg2 from chickpea storage protein, active against food spoilage bacteria and foodborne pathogens
    Marie-Louise Heymich, Ulrike Friedlein, Marius Trollmann, Karin Schwaiger, Rainer A. Böckmann, Monika Pischetsrieder
    Food Chemistry.2021; 347: 128917.     CrossRef
  • Alternative Therapeutic Interventions: Antimicrobial Peptides and Small Molecules to Treat Microbial Keratitis
    Praveen Kumar Jadi, Prerana Sharma, Bharathi Bhogapurapu, Sanhita Roy
    Frontiers in Chemistry.2021;[Epub]     CrossRef
  • His-Rich Peptides, Gly- and His-Rich Peptides: Functionally Versatile Compounds with Potential Multi-Purpose Applications
    Luiz G. P. Nunes, Thais Reichert, M. Teresa Machini
    International Journal of Peptide Research and Therapeutics.2021; 27(4): 2945.     CrossRef
  • Effect of monovalent salt concentration and peptide secondary structure in peptide-micelle binding
    Suvankar Ghosh, Gopal Pandit, Swapna Debnath, Sunanda Chatterjee, Priyadarshi Satpati
    RSC Advances.2021; 11(58): 36836.     CrossRef
  • Polyalanine peptide variations may have different mechanisms of action against multidrug-resistant bacterial pathogens
    Mário R Felício, Gislaine G O S Silveira, Karen G N Oshiro, Beatriz T Meneguetti, Octávio L Franco, Nuno C Santos, Sónia Gonçalves
    Journal of Antimicrobial Chemotherapy.2021; 76(5): 1174.     CrossRef
  • Challenge in the Discovery of New Drugs: Antimicrobial Peptides against WHO-List of Critical and High-Priority Bacteria
    Cesar Augusto Roque-Borda, Patricia Bento da Silva, Mosar Corrêa Rodrigues, Ricardo Bentes Azevedo, Leonardo Di Filippo, Jonatas L. Duarte, Marlus Chorilli, Eduardo Festozo Vicente, Fernando Rogério Pavan
    Pharmaceutics.2021; 13(6): 773.     CrossRef
  • Natural and Synthetic Halogenated Amino Acids—Structural and Bioactive Features in Antimicrobial Peptides and Peptidomimetics
    Mario Mardirossian, Marina Rubini, Mauro F. A. Adamo, Marco Scocchi, Michele Saviano, Alessandro Tossi, Renato Gennaro, Andrea Caporale
    Molecules.2021; 26(23): 7401.     CrossRef
  • Alleviation of DSS-induced colitisvia Lactobacillus acidophilustreatment in mice
    Woon-Ki Kim, Dae Hee Han, You Jin Jang, SungJun Park, Sung Jae Jang, Giljae Lee, Hyuk Seung Han, GwangPyo Ko
    Food & Function.2021; 12(1): 340.     CrossRef
  • Antibacterial activity of antimicrobial peptide-conjugated nanofibrous membranes
    Günnur Onak, Utku Kürşat Ercan, Ozan Karaman
    Biomedical Materials.2021; 16(1): 015020.     CrossRef
  • Stability and Activity of the Antimicrobial Peptide Leg1 in Solution and on Meat and Its Optimized Generation from Chickpea Storage Protein
    Marie-Louise Heymich, Showmika Srirangan, Monika Pischetsrieder
    Foods.2021; 10(6): 1192.     CrossRef
  • Is it time to reconsider prophylactic antimicrobial use for hematopoietic stem cell transplantation? a narrative review of antimicrobials in stem cell transplantation
    Dilshad Jahan, Ed Peile, Md Arif Sheikh, Salequl Islam, Sharlene Parasnath, Paras Sharma, Katia Iskandar, Sameer Dhingra, Jaykaran Charan, Timothy Craig Hardcastle, Nandeeta Samad, Tajkera Sultana Chowdhury, Siddhartha Dutta, Mainul Haque
    Expert Review of Anti-infective Therapy.2021; 19(10): 1259.     CrossRef
  • Identifying the Potential Therapeutic Targets for Atopic Dermatitis Through the Immune Infiltration Analysis and Construction of a ceRNA Network
    Shixiong Peng, Mengjiao Chen, Ming Yin, Hao Feng
    Clinical, Cosmetic and Investigational Dermatology.2021; Volume 14: 437.     CrossRef
  • A novel apidaecin Api-PR19 synergizes with the gut microbial community to maintain intestinal health and promote growth performance of broilers
    Shengru Wu, Jian Wang, Liqin Zhu, Hao Ren, Xiaojun Yang
    Journal of Animal Science and Biotechnology.2020;[Epub]     CrossRef
  • Dietary effects of antimicrobial peptides in therapeutics
    Olalekan Olanrewaju Bakare, Adewale Oluwaseun Fadaka, Ashwil Klein, Ashley Pretorius
    All Life.2020; 13(1): 78.     CrossRef
  • Characterization, Cytotoxic Analysis and Action Mechanism of Antilisterial Bacteriocin Produced by Lactobacillus plantarum Isolated from Cheddar Cheese
    Fariha Ibrahim, Nadir Naveed Siddiqui, Afsheen Aman, Shah Ali Ul Qader, Asma Ansari
    International Journal of Peptide Research and Therapeutics.2020; 26(4): 1751.     CrossRef
  • Positively Charged Polymers as Promising Devices against Multidrug Resistant Gram-Negative Bacteria: A Review
    Silvana Alfei, Anna Maria Schito
    Polymers.2020; 12(5): 1195.     CrossRef
  • Effects of Peptide Thanatin on the Growth and Transcriptome of Penicillium digitatum
    Guirong Feng, Xindan Li, Wenjun Wang, Lili Deng, Kaifang Zeng
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • A novel in silico antimicrobial peptide DP7 combats MDR Pseudomonas aeruginosa and related biofilm infections
    Qi Yin, Siwen Wu, Lei Wu, Zhenling Wang, Yandong Mu, Rui Zhang, Chunyan Dong, Bailing Zhou, Binyan Zhao, Jiajun Zheng, Ying Sun, Xingjun Cheng, Li Yang
    Journal of Antimicrobial Chemotherapy.2020; 75(11): 3248.     CrossRef
  • β-defensins and the inflammatory periodontal diseases: a systematic review
    E. A. Tikhomirova, E. S. Slazhneva, V. G. Atrushkevich
    Parodontologiya.2020; 25(4): 276.     CrossRef
  • Strategies to Combat Multidrug-Resistant and Persistent Infectious Diseases
    Olga Pacios, Lucia Blasco, Inès Bleriot, Laura Fernandez-Garcia, Mónica González Bardanca, Antón Ambroa, María López, German Bou, Maria Tomás
    Antibiotics.2020; 9(2): 65.     CrossRef
  • Ultra-Short Antimicrobial Peptoids Show Propensity for Membrane Activity Against Multi-Drug Resistant Mycobacterium tuberculosis
    Jasmeet Singh Khara, Biljana Mojsoska, Devika Mukherjee, Paul R. Langford, Brian D. Robertson, Håvard Jenssen, Pui Lai Rachel Ee, Sandra M. Newton
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Scorpion-Venom-Derived Antimicrobial Peptide Css54 Exerts Potent Antimicrobial Activity by Disrupting Bacterial Membrane of Zoonotic Bacteria
    Jonggwan Park, Jun Hee Oh, Hee Kyoung Kang, Moon-Chang Choi, Chang Ho Seo, Yoonkyung Park
    Antibiotics.2020; 9(11): 831.     CrossRef
  • Cationic amphipathic peptide analogs of cathelicidin LL‐37 as a probe in the development of antimicrobial/anticancer agents
    Athanasios Tzitzilis, Anastasia Boura‐Theodorou, Vassilios Michail, Stylianos Papadopoulos, Dimitrios Krikorian, Marilena E. Lekka, Anna‐Irini Koukkou, Maria Sakarellos‐Daitsiotis, Eugenia Panou‐Pomonis
    Journal of Peptide Science.2020;[Epub]     CrossRef
  • Antimicrobial Peptides from Rat-Tailed Maggots of the Drone Fly Eristalis tenax Show Potent Activity against Multidrug-Resistant Gram-Negative Bacteria
    Rolf Hirsch, Jochen Wiesner, Armin Bauer, Alexander Marker, Heiko Vogel, Peter Eugen Hammann, Andreas Vilcinskas
    Microorganisms.2020; 8(5): 626.     CrossRef
  • The protective and pathogenic roles of CXCL17 in human health and disease: Potential in respiratory medicine
    José Alberto Choreño-Parra, Shyamala Thirunavukkarasu, Joaquín Zúñiga, Shabaana A. Khader
    Cytokine & Growth Factor Reviews.2020; 53: 53.     CrossRef
  • The global preclinical antibacterial pipeline
    Ursula Theuretzbacher, Kevin Outterson, Aleks Engel, Anders Karlén
    Nature Reviews Microbiology.2020; 18(5): 275.     CrossRef
  • Combating Implant Infections: Shifting Focus from Bacteria to Host
    Saber Amin Yavari, Suzanne M. Castenmiller, Jos A. G. van Strijp, Michiel Croes
    Advanced Materials.2020;[Epub]     CrossRef
  • Identification of two carcinin isoforms (MnCarc1 and MnCarc2) and their function in the antimicrobial immunity of Macrobrachium nipponense
    Xiaoling Dai, Kaiqiang Wang, Ruidong Zhang, Chao Zhang, Xueying Cao, Xin Huang, Yufei Zhang, Qian Ren
    Fish & Shellfish Immunology.2020; 106: 205.     CrossRef
  • Antimicrobial Peptides: a New Frontier in Antifungal Therapy
    Giuseppe Buda De Cesare, Shane A. Cristy, Danielle A. Garsin, Michael C. Lorenz, J. Andrew Alspaugh
    mBio.2020;[Epub]     CrossRef
  • Lactoferrin Functionalized Biomaterials: Tools for Prevention of Implant-Associated Infections
    Emoke Pall, Alexandra Roman
    Antibiotics.2020; 9(8): 522.     CrossRef
  • Immunopathogenesis of COVID-19 and early immunomodulators
    Kyung-Yil Lee, Jung-Woo Rhim, Jin-Han Kang
    Clinical and Experimental Pediatrics.2020; 63(7): 239.     CrossRef
  • Analysis of mutations of defensin protein using accelerated molecular dynamics simulations
    Bharati Pandey, Chetna Tyagi, Gopal Kumar Prajapati, Awdhesh Kumar Mishra, Abeer Hashem, Abdulaziz A. Alqarawi, Elsayed Fathi Abd_Allah, Tapan Kumar Mohanta, Ayyalusamy Ramamoorthy
    PLOS ONE.2020; 15(11): e0241679.     CrossRef
  • Bronchial Epithelial Cells on the Front Line to Fight Lung Infection-Causing Aspergillus fumigatus
    Jeanne Bigot, Loïc Guillot, Juliette Guitard, Manon Ruffin, Harriet Corvol, Viviane Balloy, Christophe Hennequin
    Frontiers in Immunology.2020;[Epub]     CrossRef
  • Neutrophil Extracellular Traps in Periodontitis
    Antonio Magán-Fernández, Sarmad Muayad Rasheed Al-Bakri, Francisco O’Valle, Cristina Benavides-Reyes, Francisco Abadía-Molina, Francisco Mesa
    Cells.2020; 9(6): 1494.     CrossRef
  • Salmonid Antibacterial Immunity: An Aquaculture Perspective
    Shawna L. Semple, Brian Dixon
    Biology.2020; 9(10): 331.     CrossRef
  • Polymeric and inorganic nanoscopical antimicrobial fillers in dentistry
    Pooyan Makvandi, Jun Ting Gu, Ehsan Nazarzadeh Zare, Behnaz Ashtari, Arash Moeini, Franklin R. Tay, Li-na Niu
    Acta Biomaterialia.2020; 101: 69.     CrossRef
  • Multidrug Resistance (MDR) and Collateral Sensitivity in Bacteria, with Special Attention to Genetic and Evolutionary Aspects and to the Perspectives of Antimicrobial Peptides—A Review
    András Fodor, Birhan Addisie Abate, Péter Deák, László Fodor, Ervin Gyenge, Michael G. Klein, Zsuzsanna Koncz, Josephat Muvevi, László Ötvös, Gyöngyi Székely, Dávid Vozik, László Makrai
    Pathogens.2020; 9(7): 522.     CrossRef
  • Assessing the effectiveness of AS-48 in experimental mice models of Chagas’ disease
    Rubén Martín-Escolano, Rubén Cebrián, Mercedes Maqueda, Desirée Romero, Maria José Rosales, Manuel Sánchez-Moreno, Clotilde Marín
    Journal of Antimicrobial Chemotherapy.2020; 75(6): 1537.     CrossRef
  • Nanostructured antimicrobial peptides: The last push towards clinics
    Jose Vicente Carratalá, Naroa Serna, Antonio Villaverde, Esther Vázquez, Neus Ferrer-Miralles
    Biotechnology Advances.2020; 44: 107603.     CrossRef
  • Functional peptide-based drug delivery systems
    Zheng Lian, Tianjiao Ji
    Journal of Materials Chemistry B.2020; 8(31): 6517.     CrossRef
  • Gel Chromatographic Fractionation of Metabolic Complexes of L. rhamnosus GG and S. boulardii and their Antimicrobial Activity
    O. Isaуenko, E. Babych , T. Gorbach, O. Semenchenko, O. Kotsar
    Ukraïnsʹkij žurnal medicini, bìologìï ta sportu.2020; 5(4): 240.     CrossRef
  • Antibacterial Activity of Non-Cytotoxic, Amino Acid-Modified Polycationic Dendrimers against Pseudomonas aeruginosa and Other Non-Fermenting Gram-Negative Bacteria
    Anna Maria Schito, Silvana Alfei
    Polymers.2020; 12(8): 1818.     CrossRef
  • Antimicrobial activity of Ib-M peptides against Escherichia coli O157: H7
    Sergio Prada-Prada, Johanna Flórez-Castillo, Ana Farfán-García, Fanny Guzmán, Indira Hernández-Peñaranda, Iddya Karunasagar
    PLOS ONE.2020; 15(2): e0229019.     CrossRef
  • Antimicrobial Peptides: An Approach to Combat Resilient Infections
    Debaprasad Parai, Pia Dey, Samir K. Mukherjee
    Current Drug Discovery Technologies.2020; 17(4): 542.     CrossRef
  • Proof of concept: could snake venoms be a potential source of bioactive compounds for control of mould growth and mycotoxin production
    C. Verheecke‐Vaessen, J. Monte, E. Garcia‐Cela, N. Magan, A. Medina
    Letters in Applied Microbiology.2020; 71(5): 459.     CrossRef
  • Application of Biophysical Techniques to Investigate the Interaction of Antimicrobial Peptides With Bacterial Cells
    Maria Luisa Gelmi, Luca Domenico D'Andrea, Alessandra Romanelli
    Frontiers in Medical Technology.2020;[Epub]     CrossRef
  • Crotamine and crotalicidin, membrane active peptides from Crotalus durissus terrificus rattlesnake venom, and their structurally-minimized fragments for applications in medicine and biotechnology
    Claudio Borges Falcao, Gandhi Radis-Baptista
    Peptides.2020; 126: 170234.     CrossRef
  • Protecting the outside: biological tools to manipulate the skin microbiota
    Julie N O'Sullivan, Mary C Rea, Colin Hill, R Paul Ross
    FEMS Microbiology Ecology.2020;[Epub]     CrossRef
  • Therapeutic potential of a designed CSαβ peptide ID13 in Staphylococcus aureus-induced endometritis of mice
    Bing Li, Na Yang, Yuxue Shan, Xiumin Wang, Ya Hao, Ruoyu Mao, Da Teng, Huan Fan, Jianhua Wang
    Applied Microbiology and Biotechnology.2020; 104(15): 6693.     CrossRef
  • Ark shell protein‐derived bioactive peptides promote osteoblastic differentiation through upregulation of the canonical Wnt/β‐catenin signaling in human bone marrow‐derived mesenchymal stem cells
    Yunok Oh, Chang‐Bum Ahn, Jae‐Young Je
    Journal of Food Biochemistry.2020;[Epub]     CrossRef
  • Influence of Different Aromatic Hydrophobic Residues on the Antimicrobial Activity and Membrane Selectivity of BRBR-NH2 Tetrapeptide
    Lei Liu, Liling Zhao, Lixia Liu, Shizhong Yue, Jihua Wang, Zanxia Cao
    Langmuir.2020; 36(50): 15331.     CrossRef
  • Direct antimicrobial activity of cationic amphipathic peptide WLBU2 against Staphylococcus aureus biofilms is enhanced in physiologic buffered saline
    Jonathan B. Mandell, John A. Koch, Berthony Deslouches, Kenneth L. Urish
    Journal of Orthopaedic Research.2020; 38(12): 2657.     CrossRef
  • Clinical Applications of Antimicrobial Peptides (AMPs): Where do we Stand Now?
    Mithoor Divyashree, Madhu K. Mani, Dhanasekhar Reddy, Ranjith Kumavath, Preetam Ghosh, Vasco Azevedo, Debmalya Barh
    Protein & Peptide Letters.2020; 27(2): 120.     CrossRef
  • Microwave‐assisted extraction (MAE) combined with gas chromatography–mass spectrometry (GC–MS) for determination of volatile small molecules to evaluate compatibility of antimicrobial peptide PL‐5 spray with packaging materials
    Chu Liu, Xiangyong Yu, Zhaorui Meng, Ning Zhao, Fujuan Bai, Longshan Zhao
    Biomedical Chromatography.2020;[Epub]     CrossRef
  • Temporin L-derived peptide as a regulator of the acute inflammatory response in zymosan-induced peritonitis
    Rosa Bellavita, Federica Raucci, Francesco Merlino, Marialuisa Piccolo, Maria Grazia Ferraro, Carlo Irace, Rita Santamaria, Asif J. Iqbal, Ettore Novellino, Paolo Grieco, Nicola Mascolo, Francesco Maione
    Biomedicine & Pharmacotherapy.2020; 123: 109788.     CrossRef
  • An automatic representation of peptides for effective antimicrobial activity classification
    Jesus A. Beltran, Gabriel Del Rio, Carlos A. Brizuela
    Computational and Structural Biotechnology Journal.2020; 18: 455.     CrossRef
  • Double-Headed Cationic Lipopeptides: An Emerging Class of Antimicrobials
    Izabela Małuch, Oktawian Stachurski, Paulina Kosikowska-Adamus, Marta Makowska, Marta Bauer, Dariusz Wyrzykowski, Aleksandra Hać, Wojciech Kamysz, Milena Deptuła, Michał Pikuła, Emilia Sikorska
    International Journal of Molecular Sciences.2020; 21(23): 8944.     CrossRef
  • Antimicrobial Susceptibility Testing of Antimicrobial Peptides to Better Predict Efficacy
    Derry K. Mercer, Marcelo D. T. Torres, Searle S. Duay, Emma Lovie, Laura Simpson, Maren von Köckritz-Blickwede, Cesar de la Fuente-Nunez, Deborah A. O'Neil, Alfredo M. Angeles-Boza
    Frontiers in Cellular and Infection Microbiology.2020;[Epub]     CrossRef
  • Physicochemical-guided design of cathelicidin-derived peptides generates membrane active variants with therapeutic potential
    Nelson G. J. Oliveira, Marlon H. Cardoso, Nadya Velikova, Marcel Giesbers, Jerry M. Wells, Taia M. B. Rezende, Renko de Vries, Octávio L. Franco
    Scientific Reports.2020;[Epub]     CrossRef
  • Pseudonajide peptide derived from snake venom alters cell envelope integrity interfering on biofilm formation in Staphylococcus epidermidis
    Rafael Schneider, Muriel Primon-Barros, Rafael Gomes Von Borowski, Sophie Chat, Sylvie Nonin-Lecomte, Reynald Gillet, Alexandre José Macedo
    BMC Microbiology.2020;[Epub]     CrossRef
  • An Enhanced Variant Designed From DLP4 Cationic Peptide Against Staphylococcus aureus CVCC 546
    Bing Li, Na Yang, Xiumin Wang, Ya Hao, Ruoyu Mao, Zhanzhan Li, Zhenlong Wang, Da Teng, Jianhua Wang
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Strategies for recombinant production of antimicrobial peptides with pharmacological potential
    Kamila Botelho Sampaio de Oliveira, Michel Lopes Leite, Gisele Regina Rodrigues, Harry Morales Duque, Rosiane Andrade da Costa, Victor Albuquerque Cunha, Lorena Sousa de Loiola Costa, Nicolau Brito da Cunha, Octavio Luiz Franco, Simoni Campos Dias
    Expert Review of Clinical Pharmacology.2020; 13(4): 367.     CrossRef
  • Kinetoplastid Membrane Protein-11 Induces Pores in Anionic Phospholipid Membranes: Effect of Cholesterol
    Animesh Halder, Achinta Sannigrahi, Nayan De, Krishnananda Chattopadhyay, Sanat Karmakar
    Langmuir.2020; 36(13): 3522.     CrossRef
  • Interactions of “de novo” designed peptides with bacterial membranes: Implications in the antimicrobial activity
    Patricia Maturana, Sónia Gonçalves, Melina Martinez, Juan C. Espeche, Nuno C. Santos, Liliana Semorile, Paulo C. Maffia, Axel Hollmann
    Biochimica et Biophysica Acta (BBA) - Biomembranes.2020; 1862(11): 183443.     CrossRef
  • Tailoring the Physicochemical Properties of Antimicrobial Peptides onto a Thiazole-Based γ-Peptide Foldamer
    Clément Bonnel, Baptiste Legrand, Matthieu Simon, Margaux Clavié, Agnès Masnou, Estelle Jumas-Bilak, Young Kee Kang, Patricia Licznar-Fajardo, Ludovic T. Maillard, Nicolas Masurier
    Journal of Medicinal Chemistry.2020; 63(17): 9168.     CrossRef
  • Expression and Roles of Antimicrobial Peptides in Innate Defense of Airway Mucosa: Potential Implication in Cystic Fibrosis
    Regina Geitani, Carole Ayoub Moubareck, Zhengzhong Xu, Dolla Karam Sarkis, Lhousseine Touqui
    Frontiers in Immunology.2020;[Epub]     CrossRef
  • PACAP Is Lethal to Flavobacterium psychrophilum Through Either Direct Membrane Permeabilization or Indirectly, by Priming the Immune Response in Rainbow Trout Macrophages
    Shawna L. Semple, Tania Rodríguez-Ramos, Yamila Carpio, John S. Lumsden, Mario P. Estrada, Brian Dixon
    Frontiers in Immunology.2019;[Epub]     CrossRef
  • Self-Association of Antimicrobial Peptides: A Molecular Dynamics Simulation Study on Bombinin
    Peicho Petkov, Elena Lilkova, Nevena Ilieva, Leandar Litov
    International Journal of Molecular Sciences.2019; 20(21): 5450.     CrossRef
  • A Comparative Study of the Antimicrobial and Structural Properties of Short Peptides and Lipopeptides Containing a Repetitive Motif KLFK
    María Verónica Húmpola, María Carolina Rey, Pablo Gabriel Spontón, Arturo Carlos Simonetta, Georgina Guadalupe Tonarelli
    Protein & Peptide Letters.2019; 26(3): 192.     CrossRef
  • Perspectives on synthetic pharmacotherapy for the treatment of nosocomial pneumonia
    Ana Motos, Hua Yang, Minlan Yang, Antoni Torres
    Expert Opinion on Pharmacotherapy.2019; 20(12): 1439.     CrossRef
  • Disulfide engineering on temporin‐SHf: Stabilizing the bioactive conformation of an ultra‐short antimicrobial peptide
    Ashwini Dolle, Veera Babu Nagati, Yamanappa Hunashal, Kiran Krishnamurthy, Anil Kumar Pasupulati, Srinivasarao Raghothama, Konkallu Hanumae Gowd
    Chemical Biology & Drug Design.2019; 94(3): 1634.     CrossRef
  • Antimicrobial peptides activity in the skin
    Anna Herman, Andrzej P. Herman
    Skin Research and Technology.2019; 25(2): 111.     CrossRef
  • Structural determinants conferring unusual long life in human serum to rattlesnake‐derived antimicrobial peptide Ctn[15‐34]
    Clara Pérez‐Peinado, Susana A. Dias, Diogo A. Mendonça, Miguel A.R.B. Castanho, Ana S. Veiga, David Andreu
    Journal of Peptide Science.2019;[Epub]     CrossRef
  • A putative antimicrobial peptide from Hymenoptera in the megaplasmid pSCL4 of Streptomyces clavuligerus ATCC 27064 reveals a singular case of horizontal gene transfer with potential applications
    Sebastián Ayala‐Ruano, Daniela Santander‐Gordón, Eduardo Tejera, Yunierkis Perez‐Castillo, Vinicio Armijos-Jaramillo
    Ecology and Evolution.2019; 9(5): 2602.     CrossRef
  • A Novel Dermaseptin Isolated from the Skin Secretion of Phyllomedusa tarsius and Its Cationicity-Enhanced Analogue Exhibiting Effective Antimicrobial and Anti-Proliferative Activities
    Miaoran Li, Xinping Xi, Chengbang Ma, Xiaoling Chen, Mei Zhou, James F. Burrows, Tianbao Chen, Lei Wang
    Biomolecules.2019; 9(10): 628.     CrossRef
  • Antimicrobial Peptides: Recent Insights on Biotechnological Interventions and Future Perspectives
    Rajeshwari Sinha, Pratyoosh Shukla
    Protein & Peptide Letters.2019; 26(2): 79.     CrossRef
  • Cationic antimicrobial peptides: alternatives and/or adjuvants to antibiotics active against methicillin-resistant Staphylococcus aureus and multidrug-resistant Pseudomonas aeruginosa
    Regina Geitani, Carole Ayoub Moubareck, Lhousseine Touqui, Dolla Karam Sarkis
    BMC Microbiology.2019;[Epub]     CrossRef
  • Supramolecular Antibacterial Materials for Combatting Antibiotic Resistance
    Xingshu Li, Haotian Bai, Yuchong Yang, Juyoung Yoon, Shu Wang, Xi Zhang
    Advanced Materials.2019;[Epub]     CrossRef
  • Salt-Tolerant Antifungal and Antibacterial Activities of the Corn Defensin ZmD32
    Bomai K. Kerenga, James A. McKenna, Peta J. Harvey, Pedro Quimbar, Donovan Garcia-Ceron, Fung T. Lay, Thanh Kha Phan, Prem K. Veneer, Shaily Vasa, Kathy Parisi, Thomas M. A. Shafee, Nicole L. van der Weerden, Mark D. Hulett, David J. Craik, Marilyn A. And
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Péptidos antimicrobianos, una alternativa prometedora para el tratamiento de enfermedades infecciosas
    Kevin Samael Olascoaga-Del Angel, Grecia Sánchez-Evangelista, Israel Carmona-Navarrete, María del Carmen Galicia-Sanchez, Angélica Gómez-Luna, Susan Janneth Islas-Arollo, Jorge Ismael Castañeda-Sánchez
    Kompass Neumología.2019; 1(1): 15.     CrossRef
  • Susceptibility of microbial cells to the modified PIP2-binding sequence of gelsolin anchored on the surface of magnetic nanoparticles
    Robert Bucki, Katarzyna Niemirowicz-Laskowska, Piotr Deptuła, Agnieszka Z. Wilczewska, Paweł Misiak, Bonita Durnaś, Krzysztof Fiedoruk, Ewelina Piktel, Joanna Mystkowska, Paul A. Janmey
    Journal of Nanobiotechnology.2019;[Epub]     CrossRef
  • Positive Charge Patterning and Hydrophobicity of Membrane-Active Antimicrobial Peptides as Determinants of Activity, Toxicity, and Pharmacokinetic Stability
    Tracy A. Stone, Gregory B. Cole, Dorna Ravamehr-Lake, Huong Q. Nguyen, Farheen Khan, Simon Sharpe, Charles M. Deber
    Journal of Medicinal Chemistry.2019; 62(13): 6276.     CrossRef
  • Designer Peptide and Protein Dendrimers: A Cross-Sectional Analysis
    Rachit Sapra, Ram P. Verma, Govind P. Maurya, Sameer Dhawan, Jisha Babu, V. Haridas
    Chemical Reviews.2019; 119(21): 11391.     CrossRef
  • A Synthetic Derivative of Antimicrobial Peptide Holothuroidin 2 from Mediterranean Sea Cucumber (Holothuria tubulosa) in the Control of Listeria monocytogenes
    Maria Grazia Cusimano, Angelo Spinello, Giampaolo Barone, Domenico Schillaci, Stella Cascioferro, Alessandra Magistrato, Barbara Parrino, Vincenzo Arizza, Maria Vitale
    Marine Drugs.2019; 17(3): 159.     CrossRef
  • Systematical Analysis of the Protein Targets of Lactoferricin B and Histatin-5 Using Yeast Proteome Microarrays
    Pramod Shah, Wei-Sheng Wu, Chien-Sheng Chen
    International Journal of Molecular Sciences.2019; 20(17): 4218.     CrossRef
  • Antiseptic Effect of Ps-K18: Mechanism of Its Antibacterial and Anti-Inflammatory Activities
    Mihee Jang, Jieun Kim, Yujin Choi, JeongKyu Bang, Yangmee Kim
    International Journal of Molecular Sciences.2019; 20(19): 4895.     CrossRef
  • Pullulan nanofibers containing the antimicrobial palindromic peptide LfcinB (21–25)Palobtainedviaelectrospinning
    Julieth Tatiana Román, Carlos Alberto Fuenmayor, Carlos Mario Zuluaga Dominguez, Dianney Clavijo-Grimaldo, Martha Acosta, Javier Eduardo García-Castañeda, Ricardo Fierro-Medina, Zuly Jenny Rivera-Monroy
    RSC Advances.2019; 9(35): 20432.     CrossRef
  • Replacement of l-Amino Acids by d-Amino Acids in the Antimicrobial Peptide Ranalexin and Its Consequences for Antimicrobial Activity and Biodistribution
    Cornelius Domhan, Philipp Uhl, Christian Kleist, Stefan Zimmermann, Florian Umstätter, Karin Leotta, Walter Mier, Michael Wink
    Molecules.2019; 24(16): 2987.     CrossRef
  • A New Hope: Self-Assembling Peptides with Antimicrobial Activity
    Lucia Lombardi, Annarita Falanga, Valentina Del Genio, Stefania Galdiero
    Pharmaceutics.2019; 11(4): 166.     CrossRef
  • Effects of the antimicrobial peptide L12 against multidrug‑resistant Staphylococcus aureus
    Fu Xiong, Xiaotian Dai, Yu‑Xue Li, Rui Wei, Li An, Yajuan Wang, Zhenhong Chen
    Molecular Medicine Reports.2019;[Epub]     CrossRef
  • Utilization of antimicrobial peptides, analogues and mimics in creating antimicrobial surfaces and bio-materials
    Ingrid Batista Pinto, Leandro dos Santos Machado, Beatriz Torres Meneguetti, Micaella Lima Nogueira, Cristiano Marcelo Espínola Carvalho, Antonia Railda Roel, Octávio Luiz Franco
    Biochemical Engineering Journal.2019; 150: 107237.     CrossRef
  • Drug delivery systems designed to overcome antimicrobial resistance
    Thanh‐Nhat Pham, Pauline Loupias, Alexandra Dassonville‐Klimpt, Pascal Sonnet
    Medicinal Research Reviews.2019; 39(6): 2343.     CrossRef
  • Discovery of a Novel Antimicrobial Lipopeptide, Brevibacillin V, from Brevibacillus laterosporus fmb70 and Its Application on the Preservation of Skim Milk
    Yubo Wu, Libang Zhou, Fengxia Lu, Xiaomei Bie, Haizhen Zhao, Chong Zhang, Zhaoxin Lu, Yingjian Lu
    Journal of Agricultural and Food Chemistry.2019; 67(45): 12452.     CrossRef
  • Biotechnological Production of the Cell Penetrating Antifungal PAF102 Peptide in Pichia pastoris
    Crina Popa, Xiaoqing Shi, Tarik Ruiz, Pau Ferrer, María Coca
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Hepcidin gene of Indian major carp, Labeo rohita: Molecular, structural and functional characterization, and antibacterial activity of recombinant hepcidin
    Amruta Mohapatra, A. Dixit, L.C. Garg, P.K. Sahoo
    Aquaculture.2019; 511: 734218.     CrossRef
  • Profiling antimicrobial peptides from the medical maggotLucilia sericataas potential antibiotics for MDR Gram-negative bacteria
    Rolf Hirsch, Jochen Wiesner, Alexander Marker, Yvonne Pfeifer, Armin Bauer, Peter E Hammann, Andreas Vilcinskas
    Journal of Antimicrobial Chemotherapy.2019; 74(1): 96.     CrossRef
  • Profiling of Polar Metabolites in Mouse Feces Using Four Analytical Platforms to Study the Effects Of Cathelicidin-Related Antimicrobial Peptide in Alcoholic Liver Disease
    Liqing He, Fengyuan Li, Xinmin Yin, Patrick Bohman, Seongho Kim, Craig J. McClain, Wenke Feng, Xiang Zhang
    Journal of Proteome Research.2019; 18(7): 2875.     CrossRef
  • Antifungal Activity, Toxicity, and Membranolytic Action of a Mastoparan Analog Peptide
    Junya de Lacorte Singulani, Mariana Cristina Galeane, Marina Dorisse Ramos, Paulo César Gomes, Claudia Tavares dos Santos, Bibiana Monson de Souza, Mario Sergio Palma, Ana Marisa Fusco Almeida, Maria José Soares Mendes Giannini
    Frontiers in Cellular and Infection Microbiology.2019;[Epub]     CrossRef
  • Tryptophan-Rich and Proline-Rich Antimicrobial Peptides
    Awdhesh Mishra, Jaehyuk Choi, Eunpyo Moon, Kwang-Hyun Baek
    Molecules.2018; 23(4): 815.     CrossRef
  • The Effect of Polymer Microstructure on Encapsulation Efficiency and Release Kinetics of Citropin 1.1 from the Poly(ε-caprolactone) Microparticles
    Urszula Piotrowska, Ewa Oledzka, Wojciech Kamysz, Sławomir Białek, Marcin Sobczak
    Nanomaterials.2018; 8(7): 482.     CrossRef
  • Über bisherige Denkweisen hinaus – neue Wirkstoffe zur Überwindung der Antibiotika‐Krise
    Markus Lakemeyer, Weining Zhao, Franziska A. Mandl, Peter Hammann, Stephan A. Sieber
    Angewandte Chemie.2018; 130(44): 14642.     CrossRef
  • Antitumor activity of RT2 peptide derived from crocodile leukocyte peptide on human colon cancer xenografts in nude mice
    Pornsuda Maraming, Sompong Klaynongsruang, Patcharee Boonsiri, Surachai Maijaroen, Sakda Daduang, Jing‐Gung Chung, Jureerut Daduang
    Environmental Toxicology.2018; 33(9): 972.     CrossRef
  • Immunological Tolerance, Pregnancy, and Preeclampsia: The Roles of Semen Microbes and the Father†
    Louise C. Kenny, Douglas B. Kell
    Frontiers in Medicine.2018;[Epub]     CrossRef
  • A Recombinant Snake Cathelicidin Derivative Peptide: Antibiofilm Properties and Expression in Escherichia coli
    Mercedeh Tajbakhsh, Maziar Mohammad Akhavan, Fatemeh Fallah, Abdollah Karimi
    Biomolecules.2018; 8(4): 118.     CrossRef
  • Regulated Cell Death as a Therapeutic Target for Novel Antifungal Peptides and Biologics
    Michael R. Yeaman, Sabrina Büttner, Karin Thevissen, Alessandra Ricelli
    Oxidative Medicine and Cellular Longevity.2018;[Epub]     CrossRef
  • Antimicrobial peptides of buffalo and their role in host defenses
    Khangembam Victoria Chanu, Dimpal Thakuria, Satish Kumar
    Veterinary World.2018; 11(2): 192.     CrossRef
  • The Evolutionary Conserved γ-Core Motif Influences the Anti-Candida Activity of the Penicillium chrysogenum Antifungal Protein PAF
    Christoph Sonderegger, Györgyi Váradi, László Galgóczy, Sándor Kocsubé, Wilfried Posch, Attila Borics, Sandrine Dubrac, Gábor K. Tóth, Doris Wilflingseder, Florentine Marx
    Frontiers in Microbiology.2018;[Epub]     CrossRef
  • Antimicrobial activities of a proline-rich proprotein from Spodoptera litura
    Li-Ling Yang, Ming-Yue Zhan, Yu-Li Zhuo, Yue-Min Pan, Yang Xu, Xiu-Hong Zhou, Pei-Jin Yang, Hong-Li Liu, Zi-Hao Liang, Xiao-Dan Huang, Xiao-Qiang Yu, Xiang-Jun Rao
    Developmental & Comparative Immunology.2018; 87: 137.     CrossRef
  • Cell-Selective Pore Forming Antimicrobial Peptides of the Prodomain of Human Furin: A Conserved Aromatic/Cationic Sequence Mapping, Membrane Disruption, and Atomic-Resolution Structure and Dynamics
    Sheetal Sinha, Munesh Kumar Harioudh, Rikeshwer P. Dewangan, Wun Jern Ng, Jimut Kanti Ghosh, Surajit Bhattacharjya
    ACS Omega.2018; 3(11): 14650.     CrossRef
  • Thinking Outside the Box—Novel Antibacterials To Tackle the Resistance Crisis
    Markus Lakemeyer, Weining Zhao, Franziska A. Mandl, Peter Hammann, Stephan A. Sieber
    Angewandte Chemie International Edition.2018; 57(44): 14440.     CrossRef
  • Breaking the frontiers of cosmetology with antimicrobial peptides
    Thuany Alencar-Silva, Mariana Carolina Braga, Gustavo Oliveira Silva Santana, Felipe Saldanha-Araujo, Robert Pogue, Simoni Campos Dias, Octavio Luiz Franco, Juliana Lott Carvalho
    Biotechnology Advances.2018; 36(8): 2019.     CrossRef
  • From Antimicrobial Peptides to Antimicrobial Poly(α‐amino acid)s
    Wei Shen, Pan He, Chunsheng Xiao, Xuesi Chen
    Advanced Healthcare Materials.2018;[Epub]     CrossRef
  • Designing improved active peptides for therapeutic approaches against infectious diseases
    Bárbara Gomes, Marcelo T. Augusto, Mário R. Felício, Axel Hollmann, Octávio L. Franco, Sónia Gonçalves, Nuno C. Santos
    Biotechnology Advances.2018; 36(2): 415.     CrossRef
  • Antimicrobial Peptides and Their Therapeutic Potential for Bacterial Skin Infections and Wounds
    Anja Pfalzgraff, Klaus Brandenburg, Günther Weindl
    Frontiers in Pharmacology.2018;[Epub]     CrossRef
  • Antimicrobial Peptides and Nanotechnology, Recent Advances and Challenges
    Lubhandwa S. Biswaro, Mauricio G. da Costa Sousa, Taia M. B. Rezende, Simoni C. Dias, Octavio L. Franco
    Frontiers in Microbiology.2018;[Epub]     CrossRef
  • Bioinspired Designs, Molecular Premise and Tools for Evaluating the Ecological Importance of Antimicrobial Peptides
    Elvis Legala Ongey, Stephan Pflugmacher, Peter Neubauer
    Pharmaceuticals.2018; 11(3): 68.     CrossRef
  • Wound-Healing Peptides for Treatment of Chronic Diabetic Foot Ulcers and Other Infected Skin Injuries
    Ana Gomes, Cátia Teixeira, Ricardo Ferraz, Cristina Prudêncio, Paula Gomes
    Molecules.2017; 22(10): 1743.     CrossRef
  • Potential role of an antimicrobial peptide, KLK in inhibiting lipopolysaccharide-induced macrophage inflammation
    Pornpimon Jantaruk, Sittiruk Roytrakul, Sutthirat Sitthisak, Duangkamol Kunthalert, Anirban Bhunia
    PLOS ONE.2017; 12(8): e0183852.     CrossRef
  • Design, Recombinant Fusion Expression and Biological Evaluation of Vasoactive Intestinal Peptide Analogue as Novel Antimicrobial Agent
    Chunlan Xu, Yu Guo, Xiangjin Qiao, Xiaoya Shang, Weining Niu, Mingliang Jin
    Molecules.2017; 22(11): 1963.     CrossRef
  • Redesigned Spider Peptide with Improved Antimicrobial and Anticancer Properties
    Sónia Troeira Henriques, Nicole Lawrence, Stephanie Chaousis, Anjaneya S. Ravipati, Olivier Cheneval, Aurélie H. Benfield, Alysha G. Elliott, Angela Maria Kavanagh, Matthew A. Cooper, Lai Yue Chan, Yen-Hua Huang, David J. Craik
    ACS Chemical Biology.2017; 12(9): 2324.     CrossRef
  • Peptides with Dual Antimicrobial and Anticancer Activities
    Mário R. Felício, Osmar N. Silva, Sônia Gonçalves, Nuno C. Santos, Octávio L. Franco
    Frontiers in Chemistry.2017;[Epub]     CrossRef
  • Novel antimicrobial peptide CPF‐C1 analogs with superior stabilities and activities against multidrug‐resistant bacteria
    Junqiu Xie, Qian Zhao, Sisi Li, Zhibin Yan, Jing Li, Yao Li, Lingyun Mou, Bangzhi Zhang, Wenle Yang, Xiaokang Miao, Xianxing Jiang, Rui Wang
    Chemical Biology & Drug Design.2017; 90(5): 690.     CrossRef
  • Antimicrobial peptide repertoire of Thitarodes armoricanus, a host species of Ophiocordyceps sinensis, predicted based on de novo transcriptome sequencing and analysis
    Min Wang, Xianda Hu
    Infection, Genetics and Evolution.2017; 54: 238.     CrossRef
  • Testing cathelicidin susceptibility of bacterial mastitis isolates: Technical challenges and data output for clinical isolates
    Melissa N. Langer, Stefanie Blodkamp, Martin Bayerbach, Andrea T. Feßler, Nicole de Buhr, Thomas Gutsmann, Lothar Kreienbrock, Stefan Schwarz, Maren von Köckritz-Blickwede
    Veterinary Microbiology.2017; 210: 107.     CrossRef
  • Protein-only, antimicrobial peptide-containing recombinant nanoparticles with inherent built-in antibacterial activity
    Naroa Serna, Laura Sánchez-García, Alejandro Sánchez-Chardi, Ugutz Unzueta, Mónica Roldán, Ramón Mangues, Esther Vázquez, Antonio Villaverde
    Acta Biomaterialia.2017; 60: 256.     CrossRef
REVIEW] The Ruminococci: key symbionts of the gut ecosystem
Alex J. La Reau , Garret Suen
J. Microbiol. 2018;56(3):199-208.   Published online February 28, 2018
DOI: https://doi.org/10.1007/s12275-018-8024-4
  • 603 View
  • 0 Download
  • 240 Crossref
AbstractAbstract PDF
Mammalian gut microbial communities form intricate mutualisms with their hosts, which have profound implications on overall health. One group of important gut microbial mutualists are bacteria in the genus Ruminococcus, which serve to degrade and convert complex polysaccharides into a variety of nutrients for their hosts. Isolated decades ago from the bovine rumen, ruminococci have since been cultured from other ruminant and non-ruminant sources, and next-generation sequencing has further shown their distribution to be widespread in a diversity of animal hosts. While most ruminococci that have been studied are those capable of degrading cellulose, much less is known about non-cellulolytic, nonruminant- associated species, such as those found in humans. Furthermore, a mechanistic understanding of the role of Ruminococcus spp. in their respective hosts is still a work in progress. This review highlights the broad work done on species within the genus Ruminococcus with respect to their physiology, phylogenetic relatedness, and their potential impact on host health.

Citations

Citations to this article as recorded by  
  • Roles of engineered lignocellulolytic microbiota in bioaugmenting lignocellulose biomethanation
    Bikram Basak, Ramesh Kumar, Rahul S. Tanpure, Amrita Mishra, Suraj K. Tripathy, Sankha Chakrabortty, Hyun-Seog Roh, Krishna Kumar Yadav, Woojin Chung, Byong-Hun Jeon
    Renewable and Sustainable Energy Reviews.2025; 207: 114913.     CrossRef
  • Cordycepin improves liver fibrosis and the intestinal flora disturbance induced by 3,5-diethoxycarbonyl-1,4-dihydroxylidine in mice
    Ruiqi Xia, Bing Wu, Yourong Jian, Xiangting Li, Wen Zhang, Xiaoqing Zeng, Shiyao Chen
    European Journal of Pharmacology.2025; 987: 177172.     CrossRef
  • Human microbiota peptides: important roles in human health
    Abdul Bari Shah, Sang Hee Shim
    Natural Product Reports.2025; 42(1): 151.     CrossRef
  • Astragalus polysaccharide alleviates mastitis disrupted by Staphylococcus aureus infection by regulating gut microbiota and SCFAs metabolism
    Kefei Li, Xin Ran, Jiaxi Han, Huiping Ding, Xiaoxuan Wang, Yutao Li, Weiwei Guo, Xinyi Li, Wenjin Guo, Shoupeng Fu, Junlong Bi
    International Journal of Biological Macromolecules.2025; 286: 138422.     CrossRef
  • Individual and combined effects of fluoride and arsenic on gut bacteria: a recent update
    Sunanda Mukherjee, Olivia Sarkar, Ansuman Chattopadhyay
    The Nucleus.2025; 68(1): 213.     CrossRef
  • Ruminococcus gnavus in the gut: driver, contributor, or innocent bystander in steatotic liver disease?
    Vik Meadows, Jayson M. Antonio, Ronaldo P. Ferraris, Nan Gao
    The FEBS Journal.2025; 292(6): 1252.     CrossRef
  • Impact of mannanase on broiler performance, intestinal health, and energy utilization with varying soybean meal levels
    Xiaodan Zhang, Bin Wang, Zhibin Ban, Mi Wang, Yuan Wang, Xinzhi Wang, Yuming Guo
    Animal Advances.2025;[Epub]     CrossRef
  • Gut microbiota is associated with persistence of longer-term BNT162b2 vaccine immunogenicity
    Ho Yu Ng, Yunshi Liao, Ching Lung Cheung, Ruiqi Zhang, Kwok Hung Chan, Wai-Kay Seto, Wai K. Leung, Ivan F. N. Hung, Tommy T. Y. Lam, Ka Shing Cheung
    Frontiers in Immunology.2025;[Epub]     CrossRef
  • Gut microbiome analysis in giant panda newborns during the dietary changing from colostrum to mature milk
    Qin Shu, Tao Yan, Zhezhe Yu, Yinghu Lei, Pengpeng Zhao, Lin Shi, Yongfeng Liu
    International Dairy Journal.2025; 167: 106277.     CrossRef
  • Impact of Fermented Soy Beverages Containing Selected Vaginal Probiotics on the In Vitro Fecal Microbiota of Post-Menopausal Women
    Margherita D’Alessandro, Davide Gottardi, Silvia Arboleya, Guadalupe Monserrat Alvarado-Jasso, Carola Parolin, Beatrice Vitali, Rosalba Lanciotti, Miguel Gueimonde, Francesca Patrignani
    Foods.2025; 14(6): 1022.     CrossRef
  • Advanced Age Worsens Respiratory Function and Pulmonary Inflammation After Burn Injury and This Correlates With Changes in the Fecal Microbiome in Mice
    Rachel H McMahan, Devin Boe, Lauren E Giesy, Kevin M Najarro, Shanawaj Khair, Travis Walrath, Daniel N Frank, Elizabeth J Kovacs
    Journal of Burn Care & Research.2025; 46(1): 53.     CrossRef
  • Effects of dietary fiber on the composition, function, and symbiotic interactions of intestinal microbiota in pre-weaned calves
    Wentao Lu, Xia Yi, Yuhan Ge, Xinyue Zhang, Kaidi Shen, Haohua Zhuang, Zhaoju Deng, Dengke Liu, Jie Cao, Chong Ma
    Frontiers in Microbiology.2025;[Epub]     CrossRef
  • Optimizing Flammulina velutipes residue use: impact on health metrics and performance in three-yellow chickens
    Yuanxiao Li, Dan Liu, Wang Li, Longmei Zhao, Pinghua Cao, Yanbo Ma, Ke Ding, Cai Zhang, Ning Liu
    Frontiers in Animal Science.2025;[Epub]     CrossRef
  • Causal relationship between gut microbiota and dental caries: A Mendelian randomization analysis
    Yongyuan Jiang, Huan Jin, Qian Liang, Xuan Zhu
    Medicine.2025; 104(8): e41555.     CrossRef
  • Distinct Fecal Microbiome Communities and Functional Predictions in Spotted Seals: Age‐Dependent and Dietary Transformations
    Yue Dong, Yuyao Sun, Qinzeng Xu, Yu Zang, Zhibo Yang, Guoxu Yu, Zhongxun Wu, Hui Xiao, Xuelei Zhang
    Marine Mammal Science.2025;[Epub]     CrossRef
  • Menopausal shift on women’s health and microbial niches
    Maria R. Nieto, Maria J. Rus, Victoria Areal-Quecuty, Daniel M. Lubián-López, Aurea Simon-Soro
    npj Women's Health.2025;[Epub]     CrossRef
  • Multi-Omics Analysis Reveals the Negative Effects of High-Concentrate Diets on the Colonic Epithelium of Dumont Lambs
    Shufang Li, Hairong Wang, Boyang Li, Henan Lu, Jianxin Zhao, Aiwu Gao, Yawen An, Jinli Yang, Tian Ma
    Animals.2025; 15(5): 749.     CrossRef
  • Elucidating Causal Relationships Among Gut Microbiota, Human Blood Metabolites, and Knee Osteoarthritis: Evidence from a Two-Stage Mendelian Randomization Analysis
    Zhen Wang, Chi Zhao, Zheng Wang, Mengmeng Li, Lili Zhang, Jieyao Diao, Juntao Chen, Lijuan Zhang, Yu Wang, Miaoxiu Li, Yunfeng Zhou, Hui Xu
    Rejuvenation Research.2025;[Epub]     CrossRef
  • AI for rapid identification of major butyrate-producing bacteria in rhesus macaques (Macaca mulatta)
    Annemiek Maaskant, Donghyeok Lee, Huy Ngo, Roy C. Montijn, Jaco Bakker, Jan A. M. Langermans, Evgeni Levin
    Animal Microbiome.2025;[Epub]     CrossRef
  • Rumen microbiome associates with postpartum ketosis development in dairy cows: a prospective nested case–control study
    Fanlin Kong, Shuo Wang, Yijia Zhang, Chen Li, Dongwen Dai, Cheng Guo, Yajing Wang, Zhijun Cao, Hongjian Yang, Yanliang Bi, Wei Wang, Shengli Li
    Microbiome.2025;[Epub]     CrossRef
  • Studies on the concerted interaction of microbes in the gastrointestinal tract of ruminants on lignocellulose and its degradation mechanism
    Runqi Fu, Lin Han, Qian Li, Zhe Li, Yue Dai, Jing Leng
    Frontiers in Microbiology.2025;[Epub]     CrossRef
  • Ruminal digestion, gastrointestinal microbial profile, and metabolic pathways after the introduction of silicon-containing ultrafine particles into bull
    Elena Sizova, Elena Yausheva, Sergey Miroshnikov, Aina Kamirova, Daniil Shoshin
    Veterinary World.2025; : 1070.     CrossRef
  • Mechanistic Insights into Propolis in Targeting Type 2 Diabetes Mellitus: A Systematic Review
    Chee Ning Wong, Siew-Keah Lee, Kai Bin Liew, Yik-Ling Chew, Ang-Lim Chua
    Planta Medica.2025;[Epub]     CrossRef
  • A Novel Frontier in Gut–Brain Axis Research: The Transplantation of Fecal Microbiota in Neurodegenerative Disorders
    Majid Eslami, Zarifeh Adampour, Bahram Fadaee Dowlat, Shayan Yaghmayee, Faezeh Motallebi Tabaei, Valentyn Oksenych, Ramtin Naderian
    Biomedicines.2025; 13(4): 915.     CrossRef
  • Different Efficacy of Five Soluble Dietary Fibers on Alleviating Loperamide-Induced Constipation in Mice: Influences of Different Structural Features
    Zhiguo Zhang, Buyu Liu, Wei Liu, Xingquan Liu, Chengcheng Zhang, Weiwei Hu, Weicheng Wu
    International Journal of Molecular Sciences.2025; 26(3): 1236.     CrossRef
  • Interactions between host sex and seasonal changes shape the gut microbial communities of wild blue sheep (Pseudois nayaur)
    Yaxin Dong, Zhirong Zhang, Zhaoling Zhu, Tianhua Hu, Junda Chen, Liwei Teng, Zhensheng Liu
    Frontiers in Microbiology.2025;[Epub]     CrossRef
  • Correlations between gut microbiota and serum metabolomics in patients with neurogenic rosacea
    Min Li, Jian Fu, Jinyu Wei, Mei Wan, Ling Li, Minmin Kong, Shuguang Chen, Lian Zhang, Aiai Xia, Li Tang, Fei Hao, Jian Li
    BMC Microbiology.2025;[Epub]     CrossRef
  • Heat stress and the chicken gastrointestinal microbiota: a systematic review
    Chris Major Ncho
    Journal of Animal Science and Biotechnology.2025;[Epub]     CrossRef
  • Poncirus trifoliata peel extract supplementation elevates gut CD4+ T cells and microbial diversity in both laying hens and broilers
    Soo Hyeon Woo, Su Hyun An, Yoo-Bhin Kim, Bon-Hee Gu, Minji Kim, Hyun Jung, Seong Hun Shim, Sang Seok Joo, Woonhak Ji, Byeong Cheol Ban, Kyung-Woo Lee, Changsu Kong, Myunghoo Kim
    Poultry Science.2025; : 105548.     CrossRef
  • Behavioral Profile and Gut Microbiota Composition in Rats with Different Nervous System Excitability
    I. G. Shalaginova, D. S. Katserov, K. O. Ensh, E. A. Budenkova, A. K. Pribyshina, N. A. Dyuzhikova
    Journal of Evolutionary Biochemistry and Physiology.2025; 61(3): 732.     CrossRef
  • An updated systematic review and appraisal of the pathophysiologic mechanisms of probiotics in alleviating depression
    Nur Najibah Yusra Sulaiman, Nazifa Batrisyia Mohamad Nizam, Nurul Ain Mohd Noor, Siong Meng Lim, Kalavathy Ramasamy, Aied Mohammed Alabsi, Muhamad Fareez Ismail
    Nutritional Neuroscience.2025; : 1.     CrossRef
  • Remodelling the gut ecosystem: a dysbiosis model to elucidate gut-organ axis dynamics in mice
    Krishnapriya, Dayamrita Kollaparampil Kishanchand, Rishikesh, Siddarthan Venkatachalam, Aneesa Painadath Alikunju, Ayswaria Deepti, Unnikrishnan Sivan, Baby Chakrapani Pulikkaparambil Sasidharan
    Physiology & Behavior.2025; 299: 115000.     CrossRef
  • Genetic insights into the gut microbiota, herpes zoster, and postherpetic neuralgia: a bidirectional two-sample Mendelian randomization study
    Zhimin Deng, Yali Liu, Haiying Wang, Tianyuan Luo
    Frontiers in Genetics.2024;[Epub]     CrossRef
  • Effects of dietary addition of ellagic acid on rumen metabolism, nutrient apparent digestibility, and growth performance in Kazakh sheep
    Wenjie Zhang, Feier Ren, Changjiang Zang, Fan Yang, Xuanyue Li, Xinxin Huang, Kaixu Chen, Xiaobin Li
    Frontiers in Veterinary Science.2024;[Epub]     CrossRef
  • WITHDRAWN: Isolation and Functional Study of Efficient Cellulose Degrading Bacteria from Horse Cecum Contents
    Xiaoyue Li, Hui Li, Xiaoli Fang, Cunyuan Li, Jinming Yu, Jihong Dai, Xia Liu, Kaiping Liu, Ruyue He, Zhuang Liu, Wei Ni, Shengwei Hu
    Heliyon.2024; : e28437.     CrossRef
  • Crosstalk between innate immunity and rumen-fecal microbiota under the cold stress in goats
    Tao Luo, Jiangjiang Zhu, Kerui Li, Yongtao Li, Jun Li, Yu Chen, Hengbo Shi
    Frontiers in Immunology.2024;[Epub]     CrossRef
  • Development and evaluation of an ensemble model to identify host-related metadata from fecal microbiota of zoo-housed mammals
    Franziska Zoelzer, Daniel dos Santos Monteiro, Paul Wilhelm Dierkes
    Frontiers in Mammal Science.2024;[Epub]     CrossRef
  • Evaluating the potential prebiotic effects of umbu-cajá (Spondias spp.) fruit processing by-product flour on the human intestinal microbiota
    Jordana Nunes de Oliveira, Thatyane Mariano Rodrigues de Albuquerque, Marcos dos Santos Lima, Elma Regina Silva de Andrade Wartha, Mariana Monteiro, Yuri Mangueira do Nascimento, Josean Fechine Tavares, Marcelo Sobral da Silva, Evandro Leite de Souza, Jan
    LWT.2024; 210: 116764.     CrossRef
  • Traditional Chinese medicine improved diabetic kidney disease through targeting gut microbiota
    Xia-Qing Wu, Lei Zhao, Yan-Long Zhao, Xin-Yao He, Liang Zou, Ying-Yong Zhao, Xia Li
    Pharmaceutical Biology.2024; 62(1): 423.     CrossRef
  • Natural Foraging Selection and Gut Microecology of Two Subterranean Rodents from the Eurasian Steppe in China
    Zhenghaoni Shang, Kai Chen, Tingting Han, Fan Bu, Shanshan Sun, Na Zhu, Duhu Man, Ke Yang, Shuai Yuan, Heping Fu
    Animals.2024; 14(16): 2334.     CrossRef
  • Differential immunological responses in lamb rumen and colon to alfalfa hay and wheat straw in a concentrate-rich diet: insights into microbe-host interactions
    Kefyalew Gebeyew, Hui Mi, Yong Liu, Yongbin Liu, Biao Wang, Teka Feyera, Tan Zhiliang, Zhixiong He, Tricia A. Van Laar
    mSystems.2024;[Epub]     CrossRef
  • Deciphering the influence of gut and oral microbiomes on menopause for healthy aging
    Shuting Yu, Feiling Huang, Yixuan Huang, Fangxu Yan, Yi Li, Shenglong Xu, Yao Zhao, Xinlei Zhang, Rong Chen, Xingming Chen, Peng Zhang
    Journal of Genetics and Genomics.2024;[Epub]     CrossRef
  • Multi-omics analyses reveal rumen microbes and secondary metabolites that are unique to livestock species
    Victor O. Omondi, Geoffrey O. Bosire, John M. Onyari, Caleb Kibet, Samuel Mwasya, Vanessa N. Onyonyi, Merid N. Getahun, James R. Brown
    mSystems.2024;[Epub]     CrossRef
  • Liberated bioactive bound phenolics during in vitro gastrointestinal digestion and colonic fermentation boost the prebiotic effects of triticale insoluble dietary fiber
    Chunyan Hou, Lianjia Zhao, Muhua Ji, Jingjing Yu, Yan Di, Qian Liu, Zhengmao Zhang, Lijun Sun, Xuebo Liu, Yutang Wang
    Food Chemistry.2024; 457: 140124.     CrossRef
  • Mechanistic insights into inositol-mediated rumen function promotion and metabolic alteration using in vitro and in vivo models
    Guopei Yin, Zhe Sun, Zhanqing Wang, Yuanhong Xia, Long Cheng, Guixin Qin, Natnael D. Aschalew, Hongyun Liu, Xuefeng Zhang, Qilu Wu, Weigang Zhang, Wei Zhao, Tao Wang, Yuguo Zhen
    Frontiers in Veterinary Science.2024;[Epub]     CrossRef
  • Gut Microbial Dysbiosis Differs in Two Distinct Cachectic Tumor-Bearing Models Consuming the Same Diet
    Lauri O. Byerley, Brittany Lorenzen, Hsiao-Man Chang, William G. Hartman, Michael J. Keenan, Ryan Page, Meng Luo, Scot E. Dowd, Christopher M. Taylor
    Nutrients.2024; 16(7): 1076.     CrossRef
  • In Silico Analysis of Probiotic Bacteria Changes Across COVID-19 Severity Stages
    Clarissa Reginato Taufer, Juliana da Silva, Pabulo Henrique Rampelotto
    Microorganisms.2024; 12(11): 2353.     CrossRef
  • Assessing the impact of hatching system and body weight on the growth performance, caecal short-chain fatty acids, and microbiota composition and functionality in broilers
    Muhammad Zeeshan Akram, Ester Arévalo Sureda, Luke Comer, Matthias Corion, Nadia Everaert
    Animal Microbiome.2024;[Epub]     CrossRef
  • Effect of Raw and Cooked Green Bananas on Cecal Fermentation Characteristics in Rats
    Ryuji Nagata, Naoki Fukuma, Naoto Hashimoto, Kenichiro Shimada, Yasunori Nakayama, Kyu‐Ho Han, Michihiro Fukushima
    Starch - Stärke.2024;[Epub]     CrossRef
  • Gut microbiota, allergic rhinitis, vasomotor rhinitis, Mendelian randomization, causal association
    Xitan Lin, Xiaoyan Hu, Jing Zhang, Jing Luo, Gang Qin, Liang Jiang
    Brazilian Journal of Otorhinolaryngology.2024; 90(6): 101491.     CrossRef
  • Pharmacological benefits of Acacia against metabolic diseases: intestinal-level bioactivities and favorable modulation of gut microbiota
    Manas Ranjan Saha, Priyankar Dey
    Archives of Physiology and Biochemistry.2024; 130(1): 70.     CrossRef
  • Alteration of the gut microbial composition of critically endangered Malayan tigers (Panthera tigris jacksoni) in captivity during enrichment phase
    Mohamad Khairulmunir, Millawati Gani, Abd Rahman Mohd-Ridwan, Kayal Vizi Karuppannan, Muhammad Abu Bakar Abdul-Latiff, Badrul Munir Md-Zain
    Molecular Biology Reports.2024;[Epub]     CrossRef
  • Influence of Cuticular Waxes from Triticale on Rumen Fermentation: A Metabolomic and Microbiome Profiling Study
    Jiahao Huang, Jiawei Xu, Ruixin Wu, Jinjing Wang, Jianfeng Yang, Yuan Li, Bo Wang, Wangdan Xiong, Yanjun Guo
    Journal of Agricultural and Food Chemistry.2024; 72(3): 1592.     CrossRef
  • Metabolic and inflammatory perturbation of diabetes associated gut dysbiosis in people living with and without HIV infection
    Kai Luo, Brandilyn A. Peters, Jee-Young Moon, Xiaonan Xue, Zheng Wang, Mykhaylo Usyk, David B. Hanna, Alan L. Landay, Michael F. Schneider, Deborah Gustafson, Kathleen M. Weber, Audrey French, Anjali Sharma, Kathryn Anastos, Tao Wang, Todd Brown, Clary B.
    Genome Medicine.2024;[Epub]     CrossRef
  • Oregano Essential Oil as a Natural Plant Additive Affects Growth Performance and Serum Antibody Levels by Regulating the Rumen Microbiota of Calves
    Zhihao Luo, Ting Liu, Dongzhu Cairang, Shuru Cheng, Jiang Hu, Bingang Shi, Hui Zhu, Huan Chen, Tao Zhang, Xuejiao Yi
    Animals.2024; 14(6): 820.     CrossRef
  • Gut Microbial Communities Are Seasonally Variable in Warm-Climate Lizards Hibernating in the Winter Months
    Xiaming Zhu, Neng Jiang, Tingye Mai, Shulin Wu, Yuntao Yao, Yu Du, Chixian Lin, Longhui Lin, Xiang Ji
    Microorganisms.2024; 12(10): 1974.     CrossRef
  • Beneficial effects of American ginseng (Panax quinquefolius L.) extract residue as a feed additive on production, health status, and gastrointestinal bacteria in sika deer (Cervus nippon)
    Yan Wu, Shuting Zhao, Peihe Zheng, Hanlu Liu, Zhengyi Qu, Wei Hou, Weitao Yuan, Tao Feng, Xiaofeng Zhan, Jinlong Shen, Kaiying Wang
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • The Influence of Increasing Roughage Content in the Diet on the Growth Performance and Intestinal Flora of Jinwu and Duroc × Landrace × Yorkshire Pigs
    Gaili Xu, Jing Huang, Wenduo Chen, Ayong Zhao, Jianzhi Pan, Fuxian Yu
    Animals.2024; 14(13): 1913.     CrossRef
  • Higher temperatures exacerbate effects of antibiotics on methanogenesis in freshwater sediment
    E. Bollinger, P. Schwilden, F. Y. Lai, R. Schulz, M. Bundschuh, S. Filker
    Communications Earth & Environment.2024;[Epub]     CrossRef
  • Negative energy balance affects perinatal ewe performance, rumen morphology, rumen flora structure, and placental function
    Zhibo Wang, Peiyong Chen, Yaxu Liang, Feng Wang, Yanli Zhang
    Journal of Animal Physiology and Animal Nutrition.2024; 108(6): 1747.     CrossRef
  • Gut Microbiota and Biomarkers of Intestinal Barrier Damage in Cirrhosis
    Irina Efremova, Roman Maslennikov, Oleg Medvedev, Anna Kudryavtseva, Anastasia Avdeeva, George Krasnov, Filipp Romanikhin, Mikhail Diatroptov, Maria Fedorova, Elena Poluektova, Anna Levshina, Vladimir Ivashkin
    Microorganisms.2024; 12(3): 463.     CrossRef
  • Hong Guo Ginseng Guo (HGGG) protects against kidney injury in diabetic nephropathy by inhibiting NLRP3 inflammasome and regulating intestinal flora
    Shu Pan, Shan-shan Jiang, Rui Li, Bei Tian, Chun-yue Huang, Rong Wang, Yue-yue Li, Hui Zhu, Yong-fang Yuan, Xiao Hu
    Phytomedicine.2024; 132: 155861.     CrossRef
  • Effects of protein concentration and beta-adrenergic agonists on ruminal bacterial communities in finishing beef heifers
    Alison P. Pfau, Madison T. Henniger, Kendall L. Samuelson, Kristin E. Hales, Clint A. Löest, Mike E. Hubbert, Amanda K. Lindholm-Perry, Amanda M. Egert-McLean, Katie M. Mason, Elizabeth A. Shepherd, Brynn H. Voy, Phillip R. Myer, Juan J Loor
    PLOS ONE.2024; 19(2): e0296407.     CrossRef
  • Exploring the modulatory effects of brown seaweed meal and extracts on intestinal microbiota and morphology of broiler chickens challenged with heat stress
    Fisayo Oretomiloye, Deborah Adewole
    Poultry Science.2024; 103(4): 103562.     CrossRef
  • Intestinal microbiota and high-risk antibiotic resistance genes in wild birds with varied ecological traits: Insights from opportunistic direct sampling in Tianjin, China
    Tong Liu, Yetong Shao, Xiaoke Pang, Yufei Liu, Xunqiang Mo, Zeyou Chen, Xueqiang Lu
    Environmental Research.2024; 263: 120040.     CrossRef
  • A Systematic Review of the Effect of Polyphenols on Alterations of the Intestinal Microbiota and Shared Bacterial Profiles Between Metabolic Syndrome and Acne
    Sara Ilari, Saverio Nucera, Lucrezia Morabito, Rosamaria Caminiti, Valeria Mazza, Giovanna Ritorto, Sara Ussia, Lucia Carmela Passacatini, Roberta Macrì, Federica Scarano, Maria Serra, Elisabetta Scali, Jessica Maiuolo, Francesca Oppedisano, Ernesto Palma
    Nutrients.2024; 16(21): 3591.     CrossRef
  • Microbiota alterations are related to migraine food triggers and inflammatory markers in chronic migraine patients with medication overuse headache
    Doga Vuralli, Merve Ceren Akgor, Hale Gok Dagidir, Pınar Onat, Meltem Yalinay, Ugur Sezerman, Hayrunnisa Bolay
    The Journal of Headache and Pain.2024;[Epub]     CrossRef
  • Integrated microbiota–host–metabolome approaches reveal adaptive ruminal changes to prolonged high-grain feeding and phytogenic supplementation in cattle
    Sara Ricci, Cátia Pacífico, Susanne Kreuzer-Redmer, Ezequias Castillo-Lopez, Raul Rivera-Chacon, Arife Sener-Aydemir, Giacomo Rossi, Livio Galosi, Lucia Biagini, Heidi E Schwartz-Zimmermann, Franz Berthiller, Nicole Reisinger, Renee M Petri, Qendrim Zebel
    FEMS Microbiology Ecology.2024;[Epub]     CrossRef
  • Gastrointestinal Microbiota & Symptoms of Depression and Anxiety in Anorexia Nervosa—A Re-Analysis of the MICROBIAN Longitudinal Study
    Jasmin Ketel, Miquel Bosch-Bruguera, Greta Auchter, Ulrich Cuntz, Stephan Zipfel, Paul Enck, Isabelle Mack
    Nutrients.2024; 16(6): 891.     CrossRef
  • Causal relationship between gut microbiota and gastric cancer: A two‑sample Mendelian randomization analysis
    Jianling Zhang, Chunlu Dong, Yanyan Lin, Lifeng Shang, Junming Ma, Ruiping Hu, Hejing Wang
    Molecular and Clinical Oncology.2024;[Epub]     CrossRef
  • Metabolism of quercitrin in the colon and its beneficial regulatory effects on gut microbiota
    Xia Meng, Chenlan Xia, Hongchen Wu, Qing Gu, Ping Li
    Journal of the Science of Food and Agriculture.2024; 104(15): 9255.     CrossRef
  • Diverse mechanisms by which chemical pollutant exposure alters gut microbiota metabolism and inflammation
    Menna Teffera, Alex C. Veith, Sean Ronnekleiv-Kelly, Christopher A. Bradfield, Maria Nikodemova, Lisa Tussing-Humphreys, Kristen Malecki
    Environment International.2024; 190: 108805.     CrossRef
  • Eimeria infections of plateau pika altered the patterns of temporal alterations in gut bacterial communities
    Maoping Li, Suqin Wang, Liang Zhong, Petr Heděnec, Zhaoxian Tan, Rong Wang, Xinyang Chen, Yan Zhang, Bingmin Tang, Huakun Zhou, Jiapeng Qu
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • Inhalation of 2,2′,5,5′-tetrachlorobiphenyl (PCB52) causes changes to the gut microbiome throughout the gastrointestinal tract
    Laura E. Dean, Hui Wang, Amanda J. Bullert, Hui Wang, Andrea Adamcakova-Dodd, Ashutosh K. Mangalam, Peter S. Thorne, James A. Ankrum, Aloysius J. Klingelhutz, Hans-Joachim Lehmler
    Journal of Hazardous Materials.2024; 480: 135999.     CrossRef
  • Association of gut microbiome and oral cavity cancer: A two sample mendelian randomization and case-control study
    Xinpeng Liu, Xinping Li, Menglan Xie, Jinyuan Guo, Xianghuai Zheng, Shanwei Shi, Qiuju Cui, Danya Zhang, Zhaoqiang Zhang, Zhiping Wang
    Journal of Stomatology, Oral and Maxillofacial Surgery.2024; 125(4): 101736.     CrossRef
  • Bridging the Gap: Harnessing Plant Bioactive Molecules to Target Gut Microbiome Dysfunctions in Amyotrophic Lateral Sclerosis
    Mirela Pribac, Anca Motataianu, Sebastian Andone, Elena Mardale, Sebastian Nemeth
    Current Issues in Molecular Biology.2024; 46(5): 4471.     CrossRef
  • Temporal changes in the mouse gut bacteriota influenced by host sex, diet, and exercise
    Robert A. Dowden, Lee J. Kerkhof, Paul J. Wisniewski, Max M. Häggblom, Sara C. Campbell
    Journal of Applied Physiology.2024; 137(5): 1374.     CrossRef
  • The Ruminal Microbiome Alterations Associated with Diet-Induced Milk Fat Depression and Milk Fat Globule Size Reduction in Dairy Goats
    Menglu Zhang, Zhentao Liu, Kuixian Wu, Chuankai Zhang, Tong Fu, Yu Sun, Tengyun Gao, Liqiang Han
    Animals.2024; 14(17): 2614.     CrossRef
  • Oral administration of lysozyme protects against injury of ileum via modulating gut microbiota dysbiosis after severe traumatic brain injury
    Weijian Yang, Caihua Xi, Haijun Yao, Qiang Yuan, Jun Zhang, Qifang Chen, Gang Wu, Jin Hu
    Frontiers in Cellular and Infection Microbiology.2024;[Epub]     CrossRef
  • Survey of the fecal microbiota of indigenous small ruminants living in different areas of Guizhou
    Wei Guo, Tingmei Liu, Weiwei Wang, Yinshu Yu, André Luis Alves Neves, Mi Zhou, Xiang Chen
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • The colibactin-producing Escherichia coli alters the tumor microenvironment to immunosuppressive lipid overload facilitating colorectal cancer progression and chemoresistance
    Nilmara de Oliveira Alves, Guillaume Dalmasso, Darja Nikitina, Amaury Vaysse, Richard Ruez, Lea Ledoux, Thierry Pedron, Emma Bergsten, Olivier Boulard, Lora Autier, Sofian Allam, Laurence Motreff, Pierre Sauvanet, Diane Letourneur, Pragya Kashyap, Johan G
    Gut Microbes.2024;[Epub]     CrossRef
  • Firmicutes and Bacteroidetes contribute to mass gain variation in female obligate hibernators
    Samuel Degregori, Gina C Johnson, Paul H Barber, Daniel T Blumstein, Elizabeth Flaherty
    Journal of Mammalogy.2024; 105(1): 2.     CrossRef
  • Changes in the Human Gut Microbiome Caused by the Short-Term Impact of Lactic Acid Bacteria Consumption in Healthy People
    Mariya Gryaznova, Yuliya Smirnova, Inna Burakova, Mikhail Syromyatnikov, Pavel Chizhkov, Evgeny Popov, Vasily Popov
    Probiotics and Antimicrobial Proteins.2024; 16(4): 1240.     CrossRef
  • Characterization of the Effects of a Novel Probiotic on Salmonella Colonization of a Piglet-Derived Intestinal Microbiota Using Improved Bioreactor
    Amely Grandmont, Mohamed Rhouma, Marie-Pierre Létourneau-Montminy, William Thériault, Isabelle Mainville, Yves Arcand, Roland Leduc, Bruno Demers, Alexandre Thibodeau
    Animals.2024; 14(5): 787.     CrossRef
  • INDICATORS OF THE QUALITATIVE AND QUANTITATIVE COMPOSITION OF THE GUT COMMENSAL MICROBIOTA AS BIOMARKERS OF HOMEOSTASIS (Part 1)
    M.M. Ananieva, G.A. Loban, M.O. Faustova, Y.V. Chumak, S.M. Losev
    Актуальні проблеми сучасної медицини: Вісник Української медичної стоматологічної академії.2024; 24(1): 239.     CrossRef
  • The effect of dietary zinc and zinc physiological status on the composition of the gut microbiome in vivo
    Jacquelyn Cheng, Nikolai Kolba, Elad Tako
    Critical Reviews in Food Science and Nutrition.2024; 64(18): 6432.     CrossRef
  • Hyperbaric oxygen augments susceptibility to C. difficile infection by impairing gut microbiota ability to stimulate the HIF-1α-IL-22 axis in ILC3
    José L. Fachi, Laís. P. Pral, Helder C. Assis, Sarah Oliveira, Vinícius R. Rodovalho, Jefferson A. C. dos Santos, Mariane F. Fernandes, Valquíria A. Matheus, Renata Sesti-Costa, Paulo J. Basso, Marina Flóro e Silva, Niels O. S. Câmara, Selma Giorgio, Marc
    Gut Microbes.2024;[Epub]     CrossRef
  • INDICATORS OF QUANTITATIVE AND QUALITATIVE COMPOSITION OF THE GUT COMMENSAL MICROBIOTA AS BIOMARKERS OF HOMEOSTASIS
    M.M. Ananieva, G.A. Loban, M.O. Faustova, Y.V. Chumak, S.M. Losev
    Актуальні проблеми сучасної медицини: Вісник Української медичної стоматологічної академії.2024; 24(2): 277.     CrossRef
  • Enteromorpha prolifera Polysaccharide Alleviates Acute Alcoholic Liver Injury in C57 BL/6 Mice through the Gut–Liver Axis and NF-κB Pathway
    Tingting Yan, Jinghe Sun, Yuying Zhang, Chengrong Wen, Jingfeng Yang
    Journal of Agricultural and Food Chemistry.2024; 72(42): 23258.     CrossRef
  • Chlorella and vegetable oil inclusion in diets for growing rabbits: effects on growth, digestibility, plasma metabolites, and caecal fermentations and microbiota
    F. Bordignon, A. Trocino, P.J. Marín García, T. Larsen, G. Zardinoni, M. Molin, M. Birolo, P. Stevanato, G. Xiccato
    animal.2024; 18(12): 101365.     CrossRef
  • Hawthorn pectin plays a protective role in myocardial ischaemia by regulating intestinal flora and short chain fatty acids
    Jiayue Lou, Baojie Zhang, Yu Zheng, Meiqi Liu, Yang Qu
    Current Research in Food Science.2024; 9: 100863.     CrossRef
  • Blackcurrants shape gut microbiota profile and reduce risk of postmenopausal osteoporosis via the gut-bone axis: Evidence from a pilot randomized controlled trial
    Briana M. Nosal, Staci N. Thornton, Manije Darooghegi Mofrad, Junichi R. Sakaki, Kyle J. Mahoney, Zachary Macdonald, Lauren Daddi, Thi Dong Binh Tran, George Weinstock, Yanjiao Zhou, Elaine Choung-Hee Lee, Ock K. Chun
    The Journal of Nutritional Biochemistry.2024; 133: 109701.     CrossRef
  • Characterization of the follicular fluid microbiota based on culturomics and sequencing analysis
    Wenting Wei, Yazhou Zhou, Haiyang Zuo, Min Li, Zhiyuan Pan, Bin Liu, Lu Wang, Yafang Tan, Ruifu Yang, Wei Shang, Yujing Bi, Weizhou Wang
    Journal of Medical Microbiology .2023;[Epub]     CrossRef
  • Oral intake of Lactiplantibacillus pentosus LPG1 Produces a Beneficial Regulation of Gut Microbiota in Healthy Persons: A Randomised, Placebo-Controlled, Single-Blind Trial
    Elio López-García, Antonio Benítez-Cabello, Antonio Pablo Arenas-de Larriva, Francisco Miguel Gutierrez-Mariscal, Pablo Pérez-Martínez, Elena María Yubero-Serrano, Antonio Garrido-Fernández, Francisco Noé Arroyo-López
    Nutrients.2023; 15(8): 1931.     CrossRef
  • Polysaccharides from small black soybean alleviating type 2 diabetes via modulation of gut microbiota and serum metabolism
    Zhouya Bai, Xiaojun Huang, Guangjie Wu, Yanli Zhang, Hedi Xu, Yang Chen, Huayu Yang, Shaoping Nie
    Food Hydrocolloids.2023; 141: 108670.     CrossRef
  • Metatranscriptome analysis of blood in healthy individuals and irritable bowel syndrome patients
    Lauma Jagare, Maija Rozenberga, Ivars Silamikelis, Laura Ansone, Ilze Elbere, Monta Briviba, Kaspars Megnis, Ilze Konrade, Ilze Birka, Zane Straume, Janis Klovins
    Journal of Medical Microbiology .2023;[Epub]     CrossRef
  • Gut bacteria of adult and larval Cotinis nitida Linnaeus (Coleoptera: Scarabaeidae) demonstrate community differences according to respective life stage and gut region
    Roy A. Kucuk, Barbara J. Campbell, Nicholas J. Lyon, Emily A. Shelby, Michael S. Caterino
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Definition of a microbial signature as a predictor of endoscopic post-surgical recurrence in patients with Crohn’s disease
    Lia Oliver, Blau Camps, David Julià-Bergkvist, Joan Amoedo, Sara Ramió-Pujol, Marta Malagón, Anna Bahí, Paola Torres, Eugeni Domènech, Jordi Guardiola, Mariona Serra-Pagès, Jesus Garcia-Gil, Xavier Aldeguer
    Frontiers in Molecular Medicine.2023;[Epub]     CrossRef
  • Integrated Analysis of the Effects of Cecal Microbiota and Serum Metabolome on Market Weights of Chinese Native Chickens
    Shenghong Yang, Yongxian Yang, Xiaoxia Long, Hui Li, Fuping Zhang, Zhong Wang
    Animals.2023; 13(19): 3034.     CrossRef
  • Effects of different manganese sources on nutrient digestibility, fecal bacterial community, and mineral excretion of weaning dairy calves
    Huimin Ji, Dejin Tan, Yuhua Chen, Zhiqiang Cheng, Jingwen Zhao, Miao Lin
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Effects of an inulin fiber diet on the gut microbiome, colon, and inflammatory biomarkers in aged mice
    Noah T. Hutchinson, Selena S. Wang, Laurie A. Rund, Maria Elisa Caetano-Silva, Jacob M. Allen, Rodney W. Johnson, Jeffrey A. Woods
    Experimental Gerontology.2023; 176: 112164.     CrossRef
  • Gut Site and Gut Morphology Predict Microbiome Structure and Function in Ecologically Diverse Lemurs
    Lydia K. Greene, Erin A. McKenney, William Gasper, Claudia Wrampelmeier, Shivdeep Hayer, Erin E. Ehmke, Jonathan B. Clayton
    Microbial Ecology.2023; 85(4): 1608.     CrossRef
  • Metaproteomic Analysis of Gut Resistome in the Cecal Microbiota of Fattening Pigs Raised without Antibiotics
    Pamornya Buthasane, Sittiruk Roytrakul, Narumon Phaonakrop, Paiboon Tunsagool, Wannapol Buthasane, Nutthee Am-in, Gunnaporn Suriyaphol, Montarop Yamabhai
    Microbiology Spectrum.2023;[Epub]     CrossRef
  • Captivity restructures the gut microbiota of François' langurs (Trachypithecus francoisi)
    Fengxiang Mo, Yuhui Li, Zheng Liu, Jingjin Zheng, Zhonghao Huang
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Effects of dietary Chinese herbal mixtures on productive performance, egg quality, immune status, caecal and offspring meconial microbiota of Wenchang breeder hens
    Mengjie Liu, Jieyi Huang, Ming Ma, Gengxiong Huang, Yingwen Zhang, Yiqing Ding, Qian Qu, Weijie Lv, Shining Guo
    Frontiers in Veterinary Science.2023;[Epub]     CrossRef
  • Associations of the gut microbiome with psychoneurological symptom cluster in women with gynecologic cancers: a longitudinal study
    Zahra Amirkhanzadeh Barandouzi, Tony Eng, Joseph Shelton, Namita Khanna, Isabelle Scott, Rebecca Meador, Deborah Watkins Bruner
    Supportive Care in Cancer.2023;[Epub]     CrossRef
  • Homemade blenderized tube feeding improves gut microbiome communities in children with enteral nutrition
    Sayaka Katagiri, Yujin Ohsugi, Takahiko Shiba, Kanako Yoshimi, Kazuharu Nakagawa, Yuki Nagasawa, Aritoshi Uchida, Anhao Liu, Peiya Lin, Yuta Tsukahara, Takanori Iwata, Haruka Tohara
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Drinking Warm Water Promotes Performance by Regulating Ruminal Microbial Composition and Serum Metabolites in Yak Calves
    Tianxu Liu, Qianqian Wang, Chenxi Gao, Shenfei Long, Tengfei He, Zhenlong Wu, Zhaohui Chen
    Microorganisms.2023; 11(8): 2092.     CrossRef
  • Effect of Clindamycin on Intestinal Microbiome and Miltefosine Pharmacology in Hamsters Infected with Leishmania infantum
    Ana Isabel Olías-Molero, Pedro Botías, Montserrat Cuquerella, Jesús García-Cantalejo, Emilia Barcia, Susana Torrado, Juan José Torrado, José María Alunda
    Antibiotics.2023; 12(2): 362.     CrossRef
  • Gut Microbiome Profiling of the Endangered Southern Greater Glider (Petauroides volans) after the 2019–2020 Australian Megafire
    Jordyn Clough, Sibylle Schwab, Katarina Mikac
    Animals.2023; 13(22): 3583.     CrossRef
  • Orally Administrated Lactiplantibacillus plantarum BGAN8-Derived EPS-AN8 Ameliorates Cd Hazards in Rats
    Emilija Brdarić, Dušanka Popović, Svetlana Soković Bajić, Dina Tucović, Jelena Mutić, Maja Čakić-Milošević, Slađana Đurđić, Maja Tolinački, Aleksandra Popov Aleksandrov, Nataša Golić, Ivana Mirkov, Milica Živković
    International Journal of Molecular Sciences.2023; 24(3): 2845.     CrossRef
  • Ligularia virgaurea improved nutrient digestion, ruminal fermentation, and bacterial composition in Tibetan sheep grazing on the Qinghai–Tibetan plateau in winter
    Xiongxiong Cui, Zhaofeng Wang, Qingshan Fan, Shenghua Chang, Tianhai Yan, Fujiang Hou
    Animal Feed Science and Technology.2023; 299: 115628.     CrossRef
  • Characterization of the Gut Microbiota in Urban Thai Individuals Reveals Enterotype-Specific Signature
    Jiramaetha Sinsuebchuea, Prasobsook Paenkaew, Montree Wutthiin, Thatchawanon Nantanaranon, Kiattiyot Laeman, Weerayuth Kittichotirat, Songsak Wattanachaisaereekul, Sudarat Dulsawat, Montira Nopharatana, Namol Vorapreeda, Sakarindr Bhumiratana, Supapon Che
    Microorganisms.2023; 11(1): 136.     CrossRef
  • Lignocellulose degradation by rumen bacterial communities: New insights from metagenome analyses
    Javad Gharechahi, Mohammad Farhad Vahidi, Golandam Sharifi, Shohreh Ariaeenejad, Xue-Zhi Ding, Jian-Lin Han, Ghasem Hosseini Salekdeh
    Environmental Research.2023; 229: 115925.     CrossRef
  • Associations between the Gut Microbiome and Migraines in Children Aged 7-18 Years: An Analysis of the American Gut Project Cohort
    Jinbing Bai, Natalie Shen, Yanqun Liu
    Pain Management Nursing.2023; 24(1): 35.     CrossRef
  • Invited review: Rumen modifiers in today's dairy rations
    J.L. Firkins, K.E. Mitchell
    Journal of Dairy Science.2023; 106(5): 3053.     CrossRef
  • Exploration of the Gut Microbiome in Thai Patients with Major Depressive Disorder Shows a Specific Bacterial Profile with Depletion of the Ruminococcus Genus as a Putative Biomarker
    Michael Maes, Asara Vasupanrajit, Ketsupar Jirakran, Pavit Klomkliew, Prangwalai Chanchaem, Chavit Tunvirachaisakul, Sunchai Payungporn
    Cells.2023; 12(9): 1240.     CrossRef
  • Associations between Accelerometer-Measured Physical Activity and Fecal Microbiota in Adults with Overweight and Obesity
    RILEY L. HUGHES, DOMINIKA M. PINDUS, NAIMAN A. KHAN, NICHOLAS A. BURD, HANNAH D. HOLSCHER
    Medicine & Science in Sports & Exercise.2023; 55(4): 680.     CrossRef
  • Revealing the developmental characterization of rumen microbiome and its host in newly received cattle during receiving period contributes to formulating precise nutritional strategies
    Yanjiao Li, Kang Mao, Yitian Zang, Guwei Lu, Qinghua Qiu, Kehui Ouyang, Xianghui Zhao, Xiaozhen Song, Lanjiao Xu, Huan Liang, Mingren Qu
    Microbiome.2023;[Epub]     CrossRef
  • Analysis of microbial colonies from the first-pass meconium of healthy neonates: Comparison of vaginally and cesarean section born
    Hueng-Chuen Fan, Ying-Ru Pan, Pei-Ling Lai, Win-Lin Yeh, Shu-Wei Hu, Ming-Yuan Hsu, Wei-Kian Chua
    Tungs' Medical Journal.2023; 17(2): 76.     CrossRef
  • Food desert residence has limited impact on veteran fecal microbiome composition: a U.S. Veteran Microbiome Project study
    Diana P. Brostow, Meghan Donovan, Molly Penzenik, Christopher E. Stamper, Talia Spark, Christopher A. Lowry, Suzanne L. Ishaq, Andrew J. Hoisington, Lisa A. Brenner, Thomas J. Sharpton
    mSystems.2023;[Epub]     CrossRef
  • The gut microbiome dysbiosis is recovered by restoring a normal diet in hypercholesterolemic pigs
    Leonie Schoch, Pablo Sutelman, Rosa Suades, Lina Badimon, Isabel Moreno‐Indias, Gemma Vilahur
    European Journal of Clinical Investigation.2023;[Epub]     CrossRef
  • Partially Alternative Feeding with Fermented Distillers’ Grains Modulates Gastrointestinal Flora and Metabolic Profile in Guanling Cattle
    Guangxia He, Chao Chen, Shihui Mei, Ze Chen, Rong Zhang, Tiantian Zhang, Duhan Xu, Mingming Zhu, Xiaofen Luo, Chengrong Zeng, Bijun Zhou, Kaigong Wang, Erpeng Zhu, Zhentao Cheng
    Animals.2023; 13(22): 3437.     CrossRef
  • Dysbiosis in gastrointestinal pathophysiology: Role of the gut microbiome in Gulf War Illness
    Elise Slevin, Sachiko Koyama, Kelly Harrison, Ying Wan, James E. Klaunig, Chaodong Wu, Ashok K. Shetty, Fanyin Meng
    Journal of Cellular and Molecular Medicine.2023; 27(7): 891.     CrossRef
  • Gastrointestinal Degradation and Toxicity of Disinfection Byproducts in Drinking Water Using In Vitro Models and the Roles of Gut Microbiota
    Jinbao Yin, Dingxin Li, Tianming Zheng, Bin Hu, Peifang Wang
    Environmental Science & Technology.2023; 57(43): 16219.     CrossRef
  • Enhanced lupus progression in alcohol‐administered Fc gamma receptor‐IIb–deficiency lupus mice, partly through leaky gut‐induced inflammation
    Wiwat Chancharoenthana, Supitcha Kamolratanakul, Phatcharapon Yiengwattananon, Pornpimol Phuengmaung, Kanyarat Udompornpitak, Wilasinee Saisorn, Pratsanee Hiengrach, Peerapat Visitchanakun, Marcus J Schultz, Asada Leelahavanichkul
    Immunology & Cell Biology.2023; 101(8): 746.     CrossRef
  • Deciphering salivary microbiome signature in Crohn’s disease patients with different factors contributing to dysbiosis
    Hala Elzayat, Talha Malik, Haifa Al-Awadhi, Mazen Taha, Gehad Elghazali, Farah Al-Marzooq
    Scientific Reports.2023;[Epub]     CrossRef
  • Apolipoprotein E gene variants shape the association between dietary fibre intake and cognitive decline risk in community-dwelling older adults
    Andrea Unión-Caballero, Tomás Meroño, Cristina Andrés-Lacueva, Nicole Hidalgo-Liberona, Montserrat Rabassa, Stefania Bandinelli, Luigi Ferrucci, Massimiliano Fedecostante, Raúl Zamora-Ros, Antonio Cherubini
    Age and Ageing.2023;[Epub]     CrossRef
  • Alfalfa hay substitution for wheat straw improves beef quality via rumen microflora alteration
    Zimin Gao, Boshuai Liu, Shaokai La, Defeng Li, Xiaoyan Zhu, Hao Sun, Sen Ma, Yalei Cui, Yinghua Shi
    Heliyon.2023; 9(10): e20803.     CrossRef
  • Altered gut microbiota in older adults with mild cognitive impairment: a case-control study
    Kang-Chen Fan, Chen-Ching Lin, Yi-Chien Liu, Yi-Ping Chao, Yen-Jun Lai, Yen-Ling Chiu, Yi-Fang Chuang
    Frontiers in Aging Neuroscience.2023;[Epub]     CrossRef
  • Changes of gut microbiota under different nutritional methods in elderly patients with severe COVID-19 and their relationship with prognosis
    Jiawei Zhang, Jiaxin Deng, Juan Li, Yuping Su, Jiancong Hu, Dezheng Lin, Mingli Su, Yongcheng Chen, Sen Liao, Xuhao Bai, Miwei Lv, Tian Xu, Qinghua Zhong, Xuefeng Guo
    Frontiers in Immunology.2023;[Epub]     CrossRef
  • Stall-Feeding of Sheep on Restricted Grazing: Effects on Performance and Serum Metabolites, Ruminal Fermentation, and Fecal Microbiota
    Mengyu Zhao, Xiaoan Zhang, Yao Chen, Chunhuan Ren, Yiming Sun, Penghui Wang, Xiao Cheng, Zijun Zhang, Jiahong Chen, Yafeng Huang
    Animals.2023; 13(16): 2644.     CrossRef
  • Causal Link between Gut Microbiota, Neurophysiological States, and Bone Diseases: A Comprehensive Mendelian Randomization Study
    Shaoting Luo, Zhiyang Chen, Linfang Deng, Yufan Chen, Weizheng Zhou, Federico Canavese, Lianyong Li
    Nutrients.2023; 15(18): 3934.     CrossRef
  • Microbe-mineral interactions in the Plastisphere: Coastal biogeochemistry and consequences for degradation of plastics
    Maya S. Dodhia, Kelsey L. Rogers, Victor Fernández-Juárez, Joan A. Carreres-Calabuig, Carolin R. Löscher, Amandine A. Tisserand, Nynke Keulen, Lasse Riemann, Yvonne Shashoua, Nicole R. Posth
    Frontiers in Marine Science.2023;[Epub]     CrossRef
  • Different roles of host and habitat in determining the microbial communities of plant-feeding true bugs
    Zi-Wen Yang, Jiu-Yang Luo, Yu Men, Zhi-Hui Liu, Zi-Kai Zheng, Yan-Hui Wang, Qiang Xie
    Microbiome.2023;[Epub]     CrossRef
  • Gut Microbiome Transplants and Their Health Impacts across Species
    Benjamin H. Levine, Jessica M. Hoffman
    Microorganisms.2023; 11(6): 1488.     CrossRef
  • Causal effects of gut microbiome on autoimmune liver disease: a two-sample Mendelian randomization study
    Yugang Fu, Jiacheng Li, Yingying Zhu, Chong Chen, Jing Liu, Simin Gu, Yiyuan Zheng, Yong Li
    BMC Medical Genomics.2023;[Epub]     CrossRef
  • Targeting gut microbiota to alleviate neuroinflammation in Alzheimer’s disease
    Vu Thu Thuy Nguyen, Kristina Endres
    Advanced Drug Delivery Reviews.2022; 188: 114418.     CrossRef
  • Host Species Affects Bacterial Evenness, but Not Diversity: Comparison of Fecal Bacteria of Cows and Goats Offered the Same Diet
    Tiziana Maria Mahayri, Kateřina Olša Fliegerová, Silvana Mattiello, Stefania Celozzi, Jakub Mrázek, Chahrazed Mekadim, Hana Sechovcová, Simona Kvasnová, Elie Atallah, Giuseppe Moniello
    Animals.2022; 12(16): 2011.     CrossRef
  • Zinc Biofortified Cowpea (Vigna unguiculata L. Walp.) Soluble Extracts Modulate Assessed Cecal Bacterial Populations and Gut Morphology In Vivo (Gallus gallus)
    Mariana Juste Contin Gomes, Hércia Stampini Duarte Martino, Nikolai Kolba, Jacquelyn Cheng, Nikita Agarwal, Maurisrael de Moura Rocha, Elad Tako
    Frontiers in Bioscience-Landmark.2022;[Epub]     CrossRef
  • Microbial gut evaluation in an angolan paediatric population with sickle cell disease
    Mariana Delgadinho, Catarina Ginete, Brígida Santos, Joana Mendes, Armandina Miranda, Jocelyne Vasconcelos, Miguel Brito
    Journal of Cellular and Molecular Medicine.2022; 26(21): 5360.     CrossRef
  • Survival Strategies and Metabolic Interactions between Ruminococcus gauvreauii and Ruminococcoides bili , Isolated from Human Bile
    Natalia Molinero, Elena Conti, Alan W. Walker, Abelardo Margolles, Sylvia H. Duncan, Susana Delgado, Jeffrey A. Gralnick
    Microbiology Spectrum.2022;[Epub]     CrossRef
  • Chlorogenic acid improves growth performance of weaned rabbits via modulating the intestinal epithelium functions and intestinal microbiota
    Jiali Chen, Zhicheng Song, Rongmei Ji, Yongxu Liu, Hong Zhao, Lei Liu, Fuchang Li
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Changes to the microbiome of alfalfa during the growing season and after ensiling with Lentilactobacillus buchneri and Lentilactobacillus hilgardii inoculant
    Pascal Drouin, Julien Tremblay, Érica Benjamim da Silva, Emmanuelle Apper
    Journal of Applied Microbiology.2022; 133(4): 2331.     CrossRef
  • Evaluation of Antioxidant Capacity and Gut Microbiota Modulatory Effects of Different Kinds of Berries
    Jiebiao Chen, Yichen Shu, Yanhong Chen, Zhiwei Ge, Changfeng Zhang, Jinping Cao, Xian Li, Yue Wang, Chongde Sun
    Antioxidants.2022; 11(5): 1020.     CrossRef
  • Altered Immunoglobulin Repertoire and Decreased IgA Somatic Hypermutation in the Gut during Chronic HIV-1 Infection
    Sean T. Jones, Kejun Guo, Emily H. Cooper, Stephanie M. Dillon, Cheyret Wood, David H. Nguyen, Guannan Shen, Bradley S. Barrett, Daniel N. Frank, Miranda Kroehl, Edward N. Janoff, Katerina Kechris, Cara C. Wilson, Mario L. Santiago, Frank Kirchhoff
    Journal of Virology.2022;[Epub]     CrossRef
  • Effects of lactic acid-producing bacteria as direct-fed microbials on the ruminal microbiome
    H.F. Monteiro, A.L.J. Lelis, P. Fan, B. Calvo Agustinho, R.R. Lobo, J.A. Arce-Cordero, X. Dai, K.C. Jeong, A.P. Faciola
    Journal of Dairy Science.2022; 105(3): 2242.     CrossRef
  • Saccharomyces cerevisiae boulardiiCNCM I-1079 supplementation in finishing male pigs helps to cope with heat stress through feeding behaviour and gut microbiota modulation
    Etienne Labussière, Caroline Achard, Serge Dubois, Sylvie Combes, Mathieu Castex, David Renaudeau
    British Journal of Nutrition.2022; 127(3): 353.     CrossRef
  • Specific Alterations of Gut Microbiota in Chinese Patients with Hypertension: A Systematic Review and Meta-Analysis
    Yunlong Qin, Jin Zhao, Yuwei Wang, Ming Bai, Shiren Sun
    Kidney and Blood Pressure Research.2022; 47(7): 433.     CrossRef
  • 2-Hydroxy-4-(Methylthio) Butanoic Acid Isopropyl Ester Supplementation Altered Ruminal and Cecal Bacterial Composition and Improved Growth Performance of Finishing Beef Cattle
    Xiaoli Qin, Depeng Zhang, Xinjun Qiu, Kai Zhao, Siyu Zhang, Chunlan Liu, Lianqiang Lu, Yafang Cui, Changxiao Shi, Zhiming Chen, Rikang Hao, Yingqi Li, Shunran Yang, Lina Wang, Huili Wang, Binghai Cao, Huawei Su
    Frontiers in Nutrition.2022;[Epub]     CrossRef
  • Heat Stress Affects Jejunal Immunity of Yellow-Feathered Broilers and Is Potentially Mediated by the Microbiome
    Wen-Chao Liu, Meng-Yi Huang, Balamuralikrishnan Balasubramanian, Rajesh Jha
    Frontiers in Physiology.2022;[Epub]     CrossRef
  • Red Raspberry and Fructo-Oligosaccharide Supplementation, Metabolic Biomarkers, and the Gut Microbiota in Adults with Prediabetes: A Randomized Crossover Clinical Trial
    Xuhuiqun Zhang, Anqi Zhao, Amandeep K Sandhu, Indika Edirisinghe, Britt M Burton-Freeman
    The Journal of Nutrition.2022; 152(6): 1438.     CrossRef
  • Effects of acetate, propionate, and pH on volatile fatty acid thermodynamics in continuous cultures of ruminal contents
    Meng M. Li, S. Ghimire, B.A. Wenner, R.A. Kohn, J.L. Firkins, B. Gill, M.D. Hanigan
    Journal of Dairy Science.2022; 105(11): 8879.     CrossRef
  • Contribution of gut microbiomes and their metabolomes to the performance of Dorper and Tan sheep
    Yuhao Ma, Xue Yang, Guoying Hua, Xiaotian Deng, Tianlan Xia, Xinhai Li, Dengzhen Feng, Xuemei Deng
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Spotlight on the Gut Microbiome in Menopause: Current Insights
    Brandilyn Peters, Nanette Santoro, Robert Kaplan, Qibin Qi
    International Journal of Women's Health.2022; Volume 14: 1059.     CrossRef
  • Combinations of bacterial cultures, exogenous enzymes, and yeast-based feed additives and their impact on ruminal microbiome
    J A Arce-Cordero, S L Bennett, T Liu, A Ravelo, R R Lobo, K C Jeong, A P Faciola
    Translational Animal Science.2022;[Epub]     CrossRef
  • Ingestion of remediated lead-contaminated soils affects the fecal microbiome of mice
    S. Elizabeth George, Joseph James, Richard Devereux, Yongshan Wan, Gary L. Diamond, Karen D. Bradham, Kirk G. Scheckel, David J. Thomas
    Science of The Total Environment.2022; 837: 155797.     CrossRef
  • Exposure to crop production alters cecal prokaryotic microbiota, inflates virulome and resistome in wild prairie grouse
    Serguei V. Drovetski, Brian K. Schmidt, Jonas E. Lai, Michael S. Gross, Michelle L. Hladik, Kenan O. Matterson, Natalie K. Karouna-Renier
    Environmental Pollution.2022; 306: 119418.     CrossRef
  • Saccharomyces Boulardii Ameliorates Non-alcoholic Steatohepatitis in Mice Induced by a Methionine-Choline-Deficient Diet Through Gut-Liver Axis
    An-Ming Yang, Chien-Yu Lin, Shih-Hao Liu, Guan-Da Syu, Hao-Jhe Sun, Kuei-Chuan Lee, Han-Chieh Lin, Ming-Chih Hou
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Intestinal Dysbiosis in Patients with Histamine Intolerance
    Sònia Sánchez-Pérez, Oriol Comas-Basté, Adriana Duelo, M. Teresa Veciana-Nogués, Mercedes Berlanga, M. Luz Latorre-Moratalla, M. Carmen Vidal-Carou
    Nutrients.2022; 14(9): 1774.     CrossRef
  • Cellulolytic bacteria in the large intestine of mammals
    Alicia Froidurot, Véronique Julliand
    Gut Microbes.2022;[Epub]     CrossRef
  • Muskoxen homogenise soil microbial communities and affect the abundance of methanogens and methanotrophs
    Marie Rønne Aggerbeck, Tue Kjærgaard Nielsen, Jesper Bruun Mosbacher, Niels Martin Schmidt, Lars Hestbjerg Hansen
    Science of The Total Environment.2022; 827: 153877.     CrossRef
  • Integrated Fecal Microbiome and Metabolomics Reveals a Novel Potential Biomarker for Predicting Tibial Dyschondroplasia in Chickens
    Shucheng Huang, Chaodong Zhang, Tingting Xu, Aftab Shaukat, Yanfeng He, Pan Chen, Luxi Lin, Ke Yue, Qinqin Cao, Xishuai Tong
    Frontiers in Physiology.2022;[Epub]     CrossRef
  • Comparison of Metabolites and Gut Microbes between Patients with Ulcerative Colitis and Healthy Individuals for an Integrative Medicine Approach to Ulcerative Colitis—A Pilot Observational Clinical Study (STROBE Compliant)
    Cheol-Hyun Kim, Young-Ung Lee, Kwang-Ho Kim, Sunny Kang, Geon-Hui Kang, Hongmin Chu, Sangkwan Lee
    Diagnostics.2022; 12(8): 1969.     CrossRef
  • The association of hyperketonemia with fecal and rumen microbiota at time of diagnosis in a case-control cohort of early lactation cows
    Asha M. Miles, Jessica A. A. McArt, Svetlana F. Lima, Rafael C. Neves, Erika Ganda
    BMC Veterinary Research.2022;[Epub]     CrossRef
  • Gut metagenome profile of the Nunavik Inuit youth is distinct from industrial and non-industrial counterparts
    Jehane Y. Abed, Thibaud Godon, Fadwa Mehdaoui, Pier-Luc Plante, Maurice Boissinot, Michel G. Bergeron, Richard E. Bélanger, Gina Muckle, Natalia Poliakova, Pierre Ayotte, Jacques Corbeil, Elsa Rousseau
    Communications Biology.2022;[Epub]     CrossRef
  • The influence of exercise training volume alterations on the gut microbiome in highly‐trained middle‐distance runners
    Jonathan Craven, Amanda J. Cox, Phillip Bellinger, Ben Desbrow, Christopher Irwin, Jena Buchan, Danielle McCartney, Surendran Sabapathy
    European Journal of Sport Science.2022; 22(8): 1222.     CrossRef
  • Hypomagnetic Field Exposure Affecting Gut Microbiota, Reactive Oxygen Species Levels, and Colonic Cell Proliferation in Mice
    Aisheng Zhan, Yukai Luo, Huafeng Qin, Wei Lin, Lanxiang Tian
    Bioelectromagnetics.2022; 43(8): 462.     CrossRef
  • Analysis of 16S rRNA gene sequencing data for the taxonomic characterization of the vaginal and the fecal microbial communities in Hanwoo
    Soyoung Choi, Jihye Cha, Minji Song, JuHwan Son, Mi-Rim Park, Yeong-jo Lim, Tae-Hun Kim, Kyung-Tai Lee, Woncheoul Park
    Animal Bioscience.2022; 35(11): 1808.     CrossRef
  • Paeonia lactiflora Pallas extract alleviates antibiotics and DNCB-induced atopic dermatitis symptoms by suppressing inflammation and changing the gut microbiota composition in mice
    Seo Yeon Lee, Se Hyang Hong, Hyo In Kim, Jin Mo Ku, Yu-Jeong Choi, Min-Jeong Kim, Seong-Gyu Ko
    Biomedicine & Pharmacotherapy.2022; 154: 113574.     CrossRef
  • Influence of free and immobilized chitosan on a defined human gut microbial ecosystem
    María Ruiz-Rico, Simone Renwick, Sarah J. Vancuren, Avery V. Robinson, Connor Gianetto-Hill, Emma Allen-Vercoe, José M. Barat
    Food Research International.2022; 161: 111890.     CrossRef
  • How to Maintain a Healthy Gut Microbiome in Children with Cancer? Gut Microbiome Association with Diet in Children with Solid Tumors Postchemotherapy
    Shuqi Zhou, Melissa Martin, Christie Powell, Kathryn S. Sutton, Bradley George, Thomas Olson, Konstantinos T. Konstantinidis, Deborah W. Bruner, Jinbing Bai
    OMICS: A Journal of Integrative Biology.2022; 26(4): 236.     CrossRef
  • Influence of Chlorella vulgaris on growth, digestibility and gut morphology and microbiota of weaned piglet
    Cátia F. Martins, Paolo Trevisi, Diogo F. Coelho, Federico Correa, David M. Ribeiro, Cristina M. Alfaia, Mário Pinho, José M. Pestana, Miguel P. Mourato, André M. Almeida, Carlos M. G. A. Fontes, João P. B. Freire, José A. M. Prates
    Scientific Reports.2022;[Epub]     CrossRef
  • Comparative analysis of gut microbial composition and potential functions in captive forest and alpine musk deer
    Feng Jiang, Pengfei Song, Haijing Wang, Jingjie Zhang, Daoxin Liu, Zhenyuan Cai, Hongmei Gao, Xiangwen Chi, Tongzuo Zhang
    Applied Microbiology and Biotechnology.2022; 106(3): 1325.     CrossRef
  • Seasonal and geographical differences in the ruminal microbial and chloroplast composition of sika deer (Cervus nippon) in Japan
    Shinpei Kawarai, Kensuke Taira, Ayako Shimono, Tsuyoshi Takeshita, Shiro Takeda, Wataru Mizunoya, Yumiko Yamazaki, Shigeharu Moriya, Masato Minami
    Scientific Reports.2022;[Epub]     CrossRef
  • Consistent Alterations of Human Fecal Microbes After Transplantation into Germ-Free Mice
    Yanze Li, Wenming Cao, Na L Gao, Xing-Ming Zhao, Wei-Hua Chen
    Genomics, Proteomics & Bioinformatics.2022; 20(2): 382.     CrossRef
  • Meconium Microbiota Composition and Association with Birth Delivery Mode
    Ana K. Rocha-Viggiano, Saray Aranda-Romo, Mariana Salgado-Bustamante, Cesaré Ovando-Vázquez, Jian Wu
    Advanced Gut & Microbiome Research.2022; 2022: 1.     CrossRef
  • Characterization of presence and activity of microRNAs in the rumen of cattle hints at possible host-microbiota cross-talk mechanism
    Sara Ricci, Renée M. Petri, Cátia Pacífico, Ezequias Castillo-Lopez, Raul Rivera-Chacon, Arife Sener-Aydemir, Nicole Reisinger, Qendrim Zebeli, Susanne Kreuzer-Redmer
    Scientific Reports.2022;[Epub]     CrossRef
  • Commensal Intestinal Protozoa—Underestimated Members of the Gut Microbial Community
    Magdalena Dubik, Bartosz Pilecki, Jesper Bonnet Moeller
    Biology.2022; 11(12): 1742.     CrossRef
  • Fecal microbiome of horses transitioning between warm-season and cool-season grass pasture within integrated rotational grazing systems
    Jennifer R. Weinert-Nelson, Amy S. Biddle, Carey A. Williams
    Animal Microbiome.2022;[Epub]     CrossRef
  • The gut microbiota as a target to improve health conditions in a confined environment
    Zheng Chen, ZiYing Wang, Dan Li, Beiwei Zhu, Yongjun Xia, Guangqiang Wang, Lianzhong Ai, Chunhong Zhang, Chuan Wang
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Characterization of rumen, fecal, and milk microbiota in lactating dairy cows
    Jenna R. Williamson, Todd R. Callaway, Jeferson M. Lourenco, Valerie E. Ryman
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Analysis of Faecal Microbiota and Small ncRNAs in Autism: Detection of miRNAs and piRNAs with Possible Implications in Host–Gut Microbiota Cross-Talk
    Federica Chiappori, Francesca Anna Cupaioli, Arianna Consiglio, Noemi Di Nanni, Ettore Mosca, Vito Flavio Licciulli, Alessandra Mezzelani
    Nutrients.2022; 14(7): 1340.     CrossRef
  • Microbiota Composition of Mucosa and Interactions between the Microbes of the Different Gut Segments Could Be a Factor to Modulate the Growth Rate of Broiler Chickens
    Valéria Farkas, Gábor Csitári, László Menyhárt, Nikoletta Such, László Pál, Ferenc Husvéth, Mohamed Ali Rawash, Ákos Mezőlaki, Károly Dublecz
    Animals.2022; 12(10): 1296.     CrossRef
  • Comparative Analysis of Gut Microbial Composition and Functions in Przewalski’s Gazelle (Procapra przewalskii) From Various Habitats
    Jingjie Zhang, Hongmei Gao, Feng Jiang, Daoxin Liu, Yuansheng Hou, Xiangwen Chi, Wen Qin, Pengfei Song, Zhenyuan Cai, Tongzuo Zhang
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • The primate gut mycobiome-bacteriome interface is impacted by environmental and subsistence factors
    Ashok K. Sharma, Sam Davison, Barbora Pafco, Jonathan B. Clayton, Jessica M. Rothman, Matthew R. McLennan, Marie Cibot, Terence Fuh, Roman Vodicka, Carolyn Jost Robinson, Klara Petrzelkova, Andres Gomez
    npj Biofilms and Microbiomes.2022;[Epub]     CrossRef
  • A high-risk gut microbiota configuration associates with fatal hyperinflammatory immune and metabolic responses to SARS-CoV-2
    Werner C. Albrich, Tarini Shankar Ghosh, Sinead Ahearn-Ford, Flora Mikaeloff, Nonhlanhla Lunjani, Brian Forde, Noémie Suh, Gian-Reto Kleger, Urs Pietsch, Manuel Frischknecht, Christian Garzoni, Rossella Forlenza, Mary Horgan, Corinna Sadlier, Tommaso Roch
    Gut Microbes.2022;[Epub]     CrossRef
  • Gut Health and Microbiota in Out-of-Season Atlantic Salmon (Salmo salar L.) Smolts Before and After Seawater Transfer Under Commercial Arctic Conditions: Modulation by Functional Feed Ingredients
    Jie Wang, Alexander Jaramillo-Torres, Yanxian Li, Øyvind Jakobsen Brevik, Jan Vidar Jakobsen, Trond M. Kortner, Åshild Krogdahl
    Frontiers in Marine Science.2022;[Epub]     CrossRef
  • Bacterial communities in the gastrointestinal tract segments of helminth-resistant and helminth-susceptible sheep
    Erwin A. Paz, Eng Guan Chua, Shamshad Ul Hassan, Johan C. Greeff, Dieter G. Palmer, Shimin Liu, Binit Lamichhane, Néstor Sepúlveda, Junhua Liu, Chin Yen Tay, Graeme B. Martin
    Animal Microbiome.2022;[Epub]     CrossRef
  • Effects of spatially heterogeneous warming on gut microbiota, nutrition and gene flow of a heat-sensitive ungulate population
    Shiyu Chen, Marcel Holyoak, Hui Liu, Heng Bao, Yingjie Ma, Hongliang Dou, Guangshun Jiang
    Science of The Total Environment.2022; 806: 150537.     CrossRef
  • Albuca Bracteate Polysaccharides Synergistically Enhance the Anti-Tumor Efficacy of 5-Fluorouracil Against Colorectal Cancer by Modulating β-Catenin Signaling and Intestinal Flora
    Xinyu Yuan, Jiao Xue, Yingxia Tan, Qingguo Yang, Ziyan Qin, Xiaodong Bao, Shengkai Li, Liangliang Pan, Ziqing Jiang, Yu Wang, Yongliang Lou, Lei Jiang, Jimei Du
    Frontiers in Pharmacology.2021;[Epub]     CrossRef
  • The Impact of Enriched Resistant Starch Type‐2 Cookies on the Gut Microbiome in Hemodialysis Patients: A Randomized Controlled Trial
    Julie Ann Kemp, Bruna Regis de Paiva, Henrique Fragoso dos Santos, Hugo Emiliano de Jesus, Hannah Craven, Umer Z. Ijaz, Natalia Alvarenga Borges, Paul G. Shiels, Denise Mafra
    Molecular Nutrition & Food Research.2021;[Epub]     CrossRef
  • Gut microbiota alterations are distinct for primary colorectal cancer and hepatocellular carcinoma
    Wei Jia, Cynthia Rajani, Hongxi Xu, Xiaojiao Zheng
    Protein & Cell.2021; 12(5): 374.     CrossRef
  • Flexibility and resilience of great tit (Parus major) gut microbiomes to changing diets
    Kasun H. Bodawatta, Inga Freiberga, Katerina Puzejova, Katerina Sam, Michael Poulsen, Knud A. Jønsson
    Animal Microbiome.2021;[Epub]     CrossRef
  • Ruminococcoides bili gen. nov., sp. nov., a bile-resistant bacterium from human bile with autolytic behavior
    Natalia Molinero, Elena Conti, Borja Sánchez, Alan W. Walker, Abelardo Margolles, Sylvia H. Duncan, Susana Delgado
    International Journal of Systematic and Evolutionary Microbiology.2021;[Epub]     CrossRef
  • The potential of outdoor environments to supply beneficial butyrate-producing bacteria to humans
    Joel E. Brame, Craig Liddicoat, Catherine A. Abbott, Martin F. Breed
    Science of The Total Environment.2021; 777: 146063.     CrossRef
  • A new landscape of rabbit gut microbiota shaped by the infection of precocious parasites of Eimeria intestinalis
    Chao Li, Xianyong Liu, Geru Tao, Yunzhou Wang, Shaoqiang Wu, Jingxia Suo, Yanli Lv, Fang Yu, Xun Suo
    Veterinary Parasitology.2021; 300: 109579.     CrossRef
  • Co-digestive performance of food waste and hydrothermal pretreated corn cob
    Meng Gao, Huijing Zou, Wenjing Tian, Dezhi Shi, Hongxiang Chai, Li Gu, Qiang He, Walter Z. Tang
    Science of The Total Environment.2021; 768: 144448.     CrossRef
  • Fecal Metabolome Signature in the HIV-1 Elite Control Phenotype: Enrichment of Dipeptides Acts as an HIV-1 Antagonist but a Prevotella Agonist
    Maike Sperk, Anoop T. Ambikan, Shilpa Ray, Kamal Singh, Flora Mikaeloff, Rafael Ceña Diez, Ashwathy Narayanan, Jan Vesterbacka, Piotr Nowak, Anders Sönnerborg, Ujjwal Neogi, Viviana Simon
    Journal of Virology.2021;[Epub]     CrossRef
  • Transformation of fish waste protein to Hermetia illucens protein improves the efficacy of poultry by-products in the culture of juvenile barramundi, Lates calcarifer
    Md Reaz Chaklader, Janet Howieson, Md Javed Foysal, Ravi Fotedar
    Science of The Total Environment.2021; 796: 149045.     CrossRef
  • Analysis of appendectomy samples identified dysbiosis in acute appendicitis
    Shinya MUNAKATA, Mari TOHYA, Hirokazu MATSUZAWA, Yuki TSUCHIYA, Kota AMEMIYA, Toshiaki HAGIWARA, Daisuke MOTOOKA, Shota NAKAMURA, Kazuhiro SAKAMOTO, Shin WATANABE
    Bioscience of Microbiota, Food and Health.2021; 40(2): 92.     CrossRef
  • Conditions stimulating neutral detergent fiber degradation by dosing branched-chain volatile fatty acids. III: Relation with solid passage rate and pH on prokaryotic fatty acid profile and community in continuous culture
    Y. Roman-Garcia, K.E. Mitchell, C. Lee, M.T. Socha, T. Park, B.A. Wenner, J.L. Firkins
    Journal of Dairy Science.2021; 104(9): 9868.     CrossRef
  • In-Feed Supplementation of Resin Acid-Enriched Composition Modulates Gut Microbiota, Improves Growth Performance, and Reduces Post-Weaning Diarrhea and Gut Inflammation in Piglets
    Md Karim Uddin, Shah Hasan, Md. Rayhan Mahmud, Olli Peltoniemi, Claudio Oliviero
    Animals.2021; 11(9): 2511.     CrossRef
  • Insights into the removal of pharmaceutically active compounds from sewage sludge by two-stage mesophilic anaerobic digestion
    M.J. Gallardo-Altamirano, P. Maza-Márquez, N. Montemurro, S. Pérez, B. Rodelas, F. Osorio, C. Pozo
    Science of The Total Environment.2021; 789: 147869.     CrossRef
  • Marked Seasonal Variation in Structure and Function of Gut Microbiota in Forest and Alpine Musk Deer
    Feng Jiang, Hongmei Gao, Wen Qin, Pengfei Song, Haijing Wang, Jingjie Zhang, Daoxin Liu, Dong Wang, Tongzuo Zhang
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Environmentally enriched housing conditions affect pig welfare, immune system and gut microbiota in early life
    Caifang Wen, Ingrid van Dixhoorn, Dirkjan Schokker, Henri Woelders, Norbert Stockhofe-Zurwieden, Johanna M. J. Rebel, Hauke Smidt
    Animal Microbiome.2021;[Epub]     CrossRef
  • Effects of Iron and Zinc Biofortified Foods on Gut Microbiota In Vivo (Gallus gallus): A Systematic Review
    Mariana Juste Contin Gomes, Hércia Stampini Duarte Martino, Elad Tako
    Nutrients.2021; 13(1): 189.     CrossRef
  • Characterization of a novel Pantoea symbiont allows inference of a pattern of convergent genome reduction in bacteria associated with Pentatomidae
    Marzieh Kashkouli, Michele Castelli, Anna M. Floriano, Claudio Bandi, Sara Epis, Yaghoub Fathipour, Mohammad Mehrabadi, Davide Sassera
    Environmental Microbiology.2021; 23(1): 36.     CrossRef
  • Gut Microbiota-Derived Metabolite Signature in Suckling and Weaned Piglets
    Martin Beaumont, Laurent Cauquil, Allan Bertide, Ingrid Ahn, Céline Barilly, Lisa Gil, Cécile Canlet, Olivier Zemb, Géraldine Pascal, Arnaud Samson, Sylvie Combes
    Journal of Proteome Research.2021; 20(1): 982.     CrossRef
  • Zinc Status Index (ZSI) for Quantification of Zinc Physiological Status
    Jacquelyn Cheng, Haim Bar, Elad Tako
    Nutrients.2021; 13(10): 3399.     CrossRef
  • Time-course analysis of metabolomic and microbial responses in anaerobic digesters exposed to ammonia
    Olivier Chapleur, Simon Poirier, Angéline Guenne, Kim-Anh Lê Cao
    Chemosphere.2021; 283: 131309.     CrossRef
  • Ruminococcus bovis sp. nov., a novel species of amylolytic Ruminococcus isolated from the rumen of a dairy cow
    James Gaffney, Jordan Embree, Sean Gilmore, Mallory Embree
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Fecal Microbiota Perspective for Evaluation of Prebiotic Potential of Bamboo Hemicellulose Hydrolysate in Mice: A Preliminary Study
    Nao Ikeyama, Mitsuo Sakamoto, Moriya Ohkuma, Shigeru Hiramoto, Jianpeng Wang, Shigenobu Tone, Kiwamu Shiiba
    Microorganisms.2021; 9(5): 888.     CrossRef
  • Acceptive Immunity: The Role of Fucosylated Glycans in Human Host–Microbiome Interactions
    Svetlana Kononova, Ekaterina Litvinova, Timur Vakhitov, Maria Skalinskaya, Stanislav Sitkin
    International Journal of Molecular Sciences.2021; 22(8): 3854.     CrossRef
  • ZiBuPiYin Recipe Prevented and Treated Cognitive Decline in ZDF Rats With Diabetes-Associated Cognitive Decline via Microbiota–Gut–Brain Axis Dialogue
    Tingting Bi, Ruiqi Feng, Libin Zhan, Weiming Ren, Xiaoguang Lu
    Frontiers in Cell and Developmental Biology.2021;[Epub]     CrossRef
  • Antibiotic resistance, antimicrobial residues, and bacterial community diversity in pasture-raised poultry, swine, and beef cattle manures
    Michael James Rothrock, Byeng Ryel Min, Lana Castleberry, Heidi Waldrip, David Parker, David Brauer, Dipti Pitta, Nagaraju Indugu
    Journal of Animal Science.2021;[Epub]     CrossRef
  • Succession Analysis of Gut Microbiota Structure of Participants from Long-Lived Families in Hechi, Guangxi, China
    Minhong Ren, He Li, Zhen Fu, Quanyang Li
    Microorganisms.2021; 9(12): 2524.     CrossRef
  • Chemical Composition of Tomato Seed Flours, and Their Radical Scavenging, Anti-Inflammatory and Gut Microbiota Modulating Properties
    Uyory Choe, Jianghao Sun, Elena Bailoni, Pei Chen, Yanfang Li, Boyan Gao, Thomas T. Y. Wang, Jiajia Rao, Liangli (Lucy) Yu
    Molecules.2021; 26(5): 1478.     CrossRef
  • Type IV pili are widespread among non‐pathogenic Gram‐positive gut bacteria with diverse carbohydrate utilization patterns
    Vita Rozman, Tomaž Accetto, Sylvia H. Duncan, Harry J. Flint, Maša Vodovnik
    Environmental Microbiology.2021; 23(3): 1527.     CrossRef
  • Microbiota and Metabolites as Factors Influencing Blood Pressure Regulation
    Tao Yang, Saroj Chakraborty, Juthika Mandal, Xue Mei, Bina Joe
    Comprehensive Physiology.2021; 11(2): 1731.     CrossRef
  • Steam Explosion Pretreatment Changes Ruminal Fermentation in vitro of Corn Stover by Shifting Archaeal and Bacterial Community Structure
    Kun Wang, Xuemei Nan, Jinjin Tong, Guangyong Zhao, Linshu Jiang, Benhai Xiong
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Rumen Microbiome Composition Is Altered in Sheep Divergent in Feed Efficiency
    Steven McLoughlin, Charles Spillane, Noel Claffey, Paul E. Smith, Tommy O’Rourke, Michael G. Diskin, Sinéad M. Waters
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Gut Microbiome and Serum Metabolome Analyses Identify Unsaturated Fatty Acids and Butanoate Metabolism Induced by Gut Microbiota in Patients With Chronic Spontaneous Urticaria
    Detong Wang, Shuping Guo, Hongxia He, Li Gong, Hongzhou Cui
    Frontiers in Cellular and Infection Microbiology.2020;[Epub]     CrossRef
  • SOD1 deficiency alters gastrointestinal microbiota and metabolites in mice
    Haruka Sagi, Shuichi Shibuya, Tamotsu Kato, Yumiko Nakanishi, Arisa Tsuboi, Shigeharu Moriya, Hiroshi Ohno, Hirokuni Miyamoto, Hiroaki Kodama, Takahiko Shimizu
    Experimental Gerontology.2020; 130: 110795.     CrossRef
  • Multi-omics Approaches To Decipher the Impact of Diet and Host Physiology on the Mammalian Gut Microbiome
    Christian Milani, Giulia Alessandri, Leonardo Mancabelli, Marta Mangifesta, Gabriele Andrea Lugli, Alice Viappiani, Giulia Longhi, Rosaria Anzalone, Sabrina Duranti, Francesca Turroni, Maria Cristina Ossiprandi, Douwe van Sinderen, Marco Ventura, Johanna
    Applied and Environmental Microbiology.2020;[Epub]     CrossRef
  • Developmental symbiosis facilitates the multiple origins of herbivory
    Scott F. Gilbert
    Evolution & Development.2020; 22(1-2): 154.     CrossRef
  • Puffer Fish Gut Microbiota Studies Revealed Unique Bacterial Co-Occurrence Patterns and New Insights on Tetrodotoxin Producers
    Zhenchi Li, Jinglin Tian, Yukun Lai, Chiu-Hong Lee, Zongwei Cai, Chun-Fai Yu
    Marine Drugs.2020; 18(5): 278.     CrossRef
  • Biodegradability of woody film produced by solvent volatilisation of Japanese Beech solution
    Yuri Nishiwaki-Akine, Sui Kanazawa, Norihisa Matsuura, Ryoko Yamamoto-Ikemoto
    Scientific Reports.2020;[Epub]     CrossRef
  • The effect of a diet based on rice straw co-fermented with probiotics and enzymes versus a fresh corn Stover-based diet on the rumen bacterial community and metabolites of beef cattle
    Yongqiang Hu, Yuyong He, Shan Gao, Zhiqiang Liao, Tao Lai, Haimei Zhou, Qianlin Chen, Lingyu Li, Haijun Gao, Wei Lu
    Scientific Reports.2020;[Epub]     CrossRef
  • Comparison of serum microbiome composition in bipolar and major depressive disorders
    Sang Jin Rhee, Hyeyoung Kim, Yunna Lee, Hyun Jeong Lee, C. Hyung Keun Park, Jinho Yang, Yoon-Keun Kim, Sungmin Kym, Yong Min Ahn
    Journal of Psychiatric Research.2020; 123: 31.     CrossRef
  • Intestinal flora alterations in patients with early chronic kidney disease: a case-control study among the Han population in southwestern China
    Qiongdan Hu, Kaiyan Wu, Wei Pan, Yan Zeng, Keqin Hu, Dingguo Chen, Xinchun Huang, Qiong Zhang
    Journal of International Medical Research.2020;[Epub]     CrossRef
  • Gut microbiota derived metabolites contribute to intestinal barrier maturation at the suckling-to-weaning transition
    Martin Beaumont, Charlotte Paës, Eloïse Mussard, Christelle Knudsen, Laurent Cauquil, Patrick Aymard, Céline Barilly, Béatrice Gabinaud, Olivier Zemb, Sandra Fourre, Roselyne Gautier, Corinne Lencina, Hélène Eutamène, Vassilia Theodorou, Cécile Canlet, Sy
    Gut Microbes.2020; 11(5): 1268.     CrossRef
  • Towards a psychobiotic therapy for depression: Bifidobacterium breve CCFM1025 reverses chronic stress-induced depressive symptoms and gut microbial abnormalities in mice
    Peijun Tian, Kenneth J. O'Riordan, Yuan-kun Lee, Gang Wang, Jianxin Zhao, Hao Zhang, John F. Cryan, Wei Chen
    Neurobiology of Stress.2020; 12: 100216.     CrossRef
  • Anti-Inflammatory Activity of a Peptide from Skipjack (Katsuwonus pelamis)
    Zhi-gao Wang, Xiao-guo Ying, Peng Gao, Chun-li Wang, Yi-fan Wang, Xin-wei Yu, Jing Chen, Bin Wang, Hong-yu Luo
    Marine Drugs.2019; 17(10): 582.     CrossRef
  • Maternal Dietary Protein Intake Influences Milk and Offspring Gut Microbial Diversity in a Rat (Rattus norvegicus) Model
    Matthew Warren, Haley Hallowell, Keah Higgins, Mark Liles, Wendy Hood
    Nutrients.2019; 11(9): 2257.     CrossRef
  • Response of Beef Cattle Fecal Microbiota to Grazing on Toxic Tall Fescue
    Ryan S. Mote, Nicholas S. Hill, Joseph H. Skarlupka, Zachary B. Turner, Zachary P. Sanders, Dean P. Jones, Garret Suen, Nikolay M. Filipov, Charles M. Dozois
    Applied and Environmental Microbiology.2019;[Epub]     CrossRef
  • Ingestion of Bifidobacterium longum subspecies infantis strain CCFM687 regulated emotional behavior and the central BDNF pathway in chronic stress-induced depressive mice through reshaping the gut microbiota
    Peijun Tian, Renying Zou, Linhong Song, Xu Zhang, Bin Jiang, Gang Wang, Yuan-kun Lee, Jianxin Zhao, Hao Zhang, Wei Chen
    Food & Function.2019; 10(11): 7588.     CrossRef
  • Synergistic effects of APOE and sex on the gut microbiome of young EFAD transgenic mice
    Juan Maldonado Weng, Ishita Parikh, Ankur Naqib, Jason York, Stefan J. Green, Steven Estus, Mary Jo LaDu
    Molecular Neurodegeneration.2019;[Epub]     CrossRef
  • Comparative analysis of the gut microbiota in centenarians and young adults shows a common signature across genotypically non-related populations
    Ngangyola Tuikhar, Santosh Keisam, Rajendra Kumar Labala, Imrat, Padma Ramakrishnan, Moirangthem Cha Arunkumar, Giasuddin Ahmed, Elena Biagi, Kumaraswamy Jeyaram
    Mechanisms of Ageing and Development.2019; 179: 23.     CrossRef
  • Gut microbiomes and their metabolites shape human and animal health
    Woojun Park
    Journal of Microbiology.2018; 56(3): 151.     CrossRef
Journal Articles
Inhibitory Effect of Methyl Gallate and Gallic Acid on Oral Bacteria
Mi-Sun Kang , Jong-Suk Oh , In-Chol Kang , Suk-Jin Hong , Choong-Ho Choi
J. Microbiol. 2008;46(6):744-750.   Published online December 24, 2008
DOI: https://doi.org/10.1007/s12275-008-0235-7
  • 1,060 View
  • 0 Download
  • 210 Crossref
AbstractAbstract PDF
This study examined the ability of methyl gallate (MG) and gallic acid (GA), the main compounds of gallotannins in Galla Rhois, to inhibit the proliferation of oral bacterial and the in vitro formation of Streptococcus mutans biofilms. The antimicrobial activities of these compounds were evaluated in vitro using the broth microdilution method and a beaker-wire test. Both MG and GA had inhibitory effects on the growth of cariogenic (MIC<8 mg/ml) and periodontopathic bacteria (MIC=1 mg/ml). Moreover, these compounds significantly inhibited the in vitro formation of S. mutans biofilms (MG, 1 mg/ml; GA, 4 mg/ml; P<0.05). MG was more effective in inhibiting bacterial growth and the formation of S. mutans biofilm than GA. In conclusion, MG and GA can inhibit the growth of oral pathogens and S. mutans biofilm formation, and may be used to prevent the formation of oral biofilms.

Citations

Citations to this article as recorded by  
  • Antibacterial activity of gallic acid and methyl gallate against emerging non-fermenting bacilli
    Orlando Flores-Maldonado, Jorge Dávila-Aviña, Gloria M. González, Miguel A. Becerril-García, Ana L. Ríos-López
    Folia Microbiologica.2025; 70(1): 127.     CrossRef
  • Bioactivity and biomedical applications of pomegranate peel extract: a comprehensive review
    Jinsong Du, Heming Wang, Lingyun Zhong, Shujie Wei, Xiaoqiang Min, Hongyan Deng, Xiaoyan Zhang, Ming Zhong, Yi Huang
    Frontiers in Pharmacology.2025;[Epub]     CrossRef
  • Phyto-Mediated Synthesis of Zinc Oxide Nanoparticles Using Black Chokeberry Fruit (Aronia melanocarpa L.) Extracts for Promising Antioxidant, Antibacterial, Antidiabetic, and Photocatalytic Activities
    Soner Donmez
    Journal of Cluster Science.2025;[Epub]     CrossRef
  • Plant polyphenols: Antibacterial activity and structural insights
    Gui-Qin Li, Ya-Feng Wang, Bing-Yuan Yang, Rui-Jie He, Zhang-Bin Liu, Yong-Lin Huang
    Fitoterapia.2025; 185: 106763.     CrossRef
  • Resilience of Portulaca plants to environmental stresses and the economic potential of their bioactive compounds
    Yong Chie Liew, Lucas Wei Tze Lim, Su-Ee Lau, Boon Chin Tan
    Planta.2025;[Epub]     CrossRef
  • Exploring the Potential of Amaranthus tricolor (L.) in Combating Multidrug-resistant Uropathogens
    Sowjanya Pulipati
    Journal of Natural Remedies.2025; : 1895.     CrossRef
  • Antibacterial effects of chebulagic acid and chebulinic acid isolated from Terminalia chebula against Vibrio parahaemolyticus
    Lu-Yao Wang, Shi-Lu Huang, Yu-Wei Zhang, Xiao-Xin Huang, Fen-Tao Sun, Yao-Wu Fu, Qi-Zhong Zhang
    Aquaculture Reports.2025; 45: 103085.     CrossRef
  • Bioactive compounds from Actinidia arguta fruit as a new strategy to fight glioblastoma
    Catarina Macedo, Paulo C. Costa, Francisca Rodrigues
    Food Research International.2024; 175: 113770.     CrossRef
  • Antibacterial efficacy of copper-based metal–organic frameworks against Escherichia coli and Lactobacillus
    Sandy Elmehrath, Khansa Ahsan, Nayla Munawar, Ahmed Alzamly, Ha L. Nguyen, Yaser Greish
    RSC Advances.2024; 14(22): 15821.     CrossRef
  • Potential therapeutic agents of Bombyx mori silk cocoon extracts from agricultural product for inhibition of skin pathogenic bacteria and free radicals
    Thida Kaewkod, Puangphaka Kumseewai, Sureeporn Suriyaprom, Varachaya Intachaisri, Nitsanat Cheepchirasuk, Yingmanee Tragoolpua
    PeerJ.2024; 12: e17490.     CrossRef
  • Gallic acid: design of a pyrogallol-containing hydrogel and its biomedical applications
    Wu Weian, Ye Yunxin, Wang Ziyan, Jiang Qianzhou, Guo Lvhua
    Biomaterials Science.2024; 12(6): 1405.     CrossRef
  • Methyl gallate attenuates virulence and decreases antibiotic resistance in extensively drug-resistant Pseudomonas aeruginosa
    Orlando Flores-Maldonado, Cristina I. Lezcano-Domínguez, Jorge Dávila-Aviña, Gloria M. González, Ana L. Ríos-López
    Microbial Pathogenesis.2024; 194: 106830.     CrossRef
  • Antimicrobial Effect of Lippia citriodora Extract in Combination with Gallic Acid or Octyl Gallate on Bacteria from Meat
    Javier Rúa, Javier Sanz-Gómez, Sheila Maestro, Irma Caro, María Rosario García-Armesto
    Foods.2024; 13(11): 1643.     CrossRef
  • Methyl gallate isolated from partridge tea (Mallotus oblongifolius (Miq.) Müll.Arg.) inhibits the biofilms and virulence factors of Burkholderia thailandensis
    Kai-Zhong Xu, Shi-Liang Xiang, Ying-Jie Wang, Bo Wang, Ai-Qun Jia
    Journal of Ethnopharmacology.2024; 320: 117422.     CrossRef
  • Ameliorating impaired cardiac function in myocardial infarction using exosome-loaded gallic-acid-containing polyurethane scaffolds
    Ankita Das, Aman Nikhil, Parvaiz Ahmad Shiekh, Babita Yadav, Kumaravelu Jagavelu, Ashok Kumar
    Bioactive Materials.2024; 33: 324.     CrossRef
  • Anti-Malassezia globosa (MYA-4889, ATCC) activity of Thai propolis from the stingless bee Geniotrigona thoracica
    Kawisara Konsila, Wanchai Assavalapsakul, Preecha Phuwapraisirisan, Chanpen Chanchao
    Heliyon.2024; 10(8): e29421.     CrossRef
  • Polyphenols and Their Nanoformulations as Potential Antibiofilm Agents Against Multidrug-Resistant Pathogens
    Modawy EM Elkhalifa, Muhammad Ashraf, Alshebli Ahmed, Assad Usman, Alashary AE Hamdoon, Mohammed A Elawad, Meshari G Almalki, Osama F Mosa, Laziz N Niyazov, Muhammad Ayaz
    Future Microbiology.2024; 19(3): 255.     CrossRef
  • Chemical aspects of polyphenol-protein interactions and their antibacterial activity
    Sanusi Shamsudeen Nassarawa, Gulzar Ahmad Nayik, S. Dutta Gupta, Franklin Ore Areche, Yash D. Jagdale, Mohammad Javed Ansari, Hassan A. Hemeg, Ammar AL-Farga, Saqer S. Alotaibi
    Critical Reviews in Food Science and Nutrition.2023; 63(28): 9482.     CrossRef
  • Efficacy of Elaeagnus umbellata leaves on prevention of cadmium-induced toxicity in HepG2 cells
    Jae-Yeul Lee, Seun-Ah Yang, Won-Bin Bae
    Korean Journal of Food Preservation.2023; 30(5): 797.     CrossRef
  • Trewia nudiflora Linn, a Medicinal Plant: Allelopathic Potential and Characterization of Bioactive Compounds from Its Leaf Extracts
    Mst. Rokeya Khatun, Shunya Tojo, Toshiaki Teruya, Hisashi Kato-Noguchi
    Horticulturae.2023; 9(8): 897.     CrossRef
  • Alkyl Gallates as Potential Antibiofilm Agents: A Review
    Mahmoud Rayan, Saleh Abu Lafi, Mizied Falah, Tomas Kacergius, Agne Kirkliauskiene, Vika Gabe, Anwar Rayan
    Molecules.2023; 28(4): 1751.     CrossRef
  • Application of the herbal chemical marker ranking system (Herb MaRS) to the standardization of herbal raw materials: a case study
    Bruhan Kaggwa, Godwin Anywar, Edson Ireeta Munanura, Raphael Wangalwa, Henry Kyeyune, Hedmon Okella, Fadhiru Pakoyo Kamba, Ogwang Patrick Engeu
    BMC Complementary Medicine and Therapies.2023;[Epub]     CrossRef
  • Simultaneous isoquercitin and gallic acid production of Aspergillus niger on Triphala byproduct under solid state fermentation in packed-bed bioreactor
    Pattarabhorn Pakaweerachat, Worasaung Klinthong, Kazuhisa Ohtaguchi, Teerin Chysirichote
    AIMS Agriculture and Food.2023; 8(2): 359.     CrossRef
  • Antioxidant and antibacterial activity of Apis laboriosa honey against Salmonella enterica serovar Typhimurium
    Weihua Tan, Yuanyuan Tian, Qingya Zhang, Siwei Miao, Wenrong Wu, Xiaoqing Miao, Haiou Kuang, Wenchao Yang
    Frontiers in Nutrition.2023;[Epub]     CrossRef
  • New Palladium(II) Complexes Containing Methyl Gallate and Octyl Gallate: Effect against Mycobacterium tuberculosis and Campylobacter jejuni
    Raphael Tristão Cruvinel Silva, Micaela Guidotti-Takeuchi, Jéssica Laura Miranda Peixoto, Fernanda Manaia Demarqui, Ananda Paula Mori, Carolyne Ferreira Dumont, Gabriella Rayane Aparecida Ferreira, Gabriele de Menezes Pereira, Daise Aparecida Rossi, Pedro
    Molecules.2023; 28(9): 3887.     CrossRef
  • Methyl gallate: Review of pharmacological activity
    Huaguo Liang, Qingsong Huang, Li Zou, Peng Wei, Jiazheng Lu, Yongli Zhang
    Pharmacological Research.2023; 194: 106849.     CrossRef
  • Assessing the Potential of Gallic Acid and Methyl Gallate to Enhance the Efficacy of β-Lactam Antibiotics against Methicillin-Resistant Staphylococcus aureus by Targeting β-Lactamase: In Silico and In Vitro Studies
    Pimsumon Jiamboonsri, Chatchakorn Eurtivong, Sompit Wanwong
    Antibiotics.2023; 12(11): 1622.     CrossRef
  • Drug-Repurposing Screening Identifies a Gallic Acid Binding Site on SARS-CoV-2 Non-structural Protein 7
    Yushu Gu, Miaomiao Liu, Bart L. Staker, Garry W. Buchko, Ronald J. Quinn
    ACS Pharmacology & Translational Science.2023; 6(4): 578.     CrossRef
  • Inhibition of Pseudomonas aeruginosa quorum sensing by methyl gallate from Mangifera indica
    Nourhan G. Naga, Ahmed A. Zaki, Dalia E. El-Badan, Heba S. Rateb, Khaled M. Ghanem, Mona I. Shaaban
    Scientific Reports.2023;[Epub]     CrossRef
  • Polyphenolic natural products as photosensitizers for antimicrobial photodynamic therapy: recent advances and future prospects
    Xiaoyun Wang, Lian Wang, Reza Fekrazad, Lu Zhang, Xian Jiang, Gu He, Xiang Wen
    Frontiers in Immunology.2023;[Epub]     CrossRef
  • Influence of Gallic Acid-Containing Mouth Spray on Dental Health and Oral Microbiota of Healthy Dogs: A Pilot Study
    Nichaphat Thongma, Bhagavathi Sundaram Sivamaruthi, Muruganantham Bharathi, Chawin Tansrisook, Sartjin Peerajan, Kittidaj Tanongpitchayes, Natcha Chawnan, Subramanian Rashmi, Kriangkrai Thongkorn, Chaiyavat Chaiyasut
    Veterinary Sciences.2023; 10(7): 424.     CrossRef
  • Effects of Secondary Metabolites of Rice on Brown Planthopper and Its Symbionts
    Ziyuan Deng, Chengling Lai, Jun Zhang, Fan Sun, Danting Li, Peiying Hao, Xuping Shentu, Kun Pang, Xiaoping Yu
    International Journal of Molecular Sciences.2023; 25(1): 386.     CrossRef
  • Pyrogallol impairs staphylococcal biofilm formation via induction of bacterial oxidative stress
    Katharina H C Roese, Christina Torlone, Lauren A Cooper, Lee Esposito, Amy M Deveau, Ursula S R Röse, Kristin M Burkholder
    Journal of Applied Microbiology.2023;[Epub]     CrossRef
  • Influence of Gallic Acid-Containing Mouth Spray on Dental Health and Oral Microbiota of Healthy Cats—A Pilot Study
    Chaiyavat Chaiyasut, Bhagavathi Sundaram Sivamaruthi, Muruganantham Bharathi, Chawin Tansrisook, Sartjin Peerajan, Khontaros Chaiyasut, Suchanat Khongtan, Kittidaj Tanongpitchayes, Nichaphat Thongma, Natcha Chawnan, Kriangkrai Thongkorn
    Veterinary Sciences.2022; 9(7): 313.     CrossRef
  • Gallic Acid Reactive Extraction with and without 1-Octanol as Phase Modifier: Experimental and Modeling
    Alexandra Cristina Blaga, Elena Niculina Dragoi, Raluca Elena Munteanu, Dan Cascaval, Anca Irina Galaction
    Fermentation.2022; 8(11): 633.     CrossRef
  • Determination of time dependent antibacterial activities of curcumin, carvacrol and styrax liquidus on Salmonella Enteritidis
    Erhan KEYVAN, Hidayet TUTUN, Hatice Ahu KAHRAMAN, Erdi ŞEN, Ahu DEMİRTAŞ, Soner DÖNMEZ, Ali Özhan AKYÜZ
    Ankara Üniversitesi Veteriner Fakültesi Dergisi.2022; 69(4): 355.     CrossRef
  • Experimental Glass Ionomer Cement Containing Gallic acid: Antibacterial Effect and Fluoride Release an in vitro Study
    Saher M. Elsharkawy, Yasser F. Gomaa, Reem Gamal
    Open Access Macedonian Journal of Medical Sciences.2022; 10(D): 131.     CrossRef
  • Nutraceutical Profile of “Carosello” (Cucumis melo L.) Grown in an Out-of-Season Cycle under LEDs
    Onofrio Davide Palmitessa, Miriana Durante, Annalisa Somma, Giovanni Mita, Massimiliano D’Imperio, Francesco Serio, Pietro Santamaria
    Antioxidants.2022; 11(4): 777.     CrossRef
  • Antibacterial Fractions from Erodium cicutarium Exposed—Clinical Strains of Staphylococcus aureus in Focus
    Vanja Ljoljić Bilić, Uroš M. Gašić, Dušanka Milojković-Opsenica, Hrvoje Rimac, Jadranka Vuković Rodriguez, Josipa Vlainić, Diana Brlek-Gorski, Ivan Kosalec
    Antibiotics.2022; 11(4): 492.     CrossRef
  • Corchorus olitorius L. (Jute) leaf and seed extracts exerted high antibacterial activity against food and plant pathogenic bacteria
    Özlem Darcansoy İşeri, Didem Aksoy Körpe, Feride Iffet Sahin, Evren Cabi, Mehmet Haberal
    The EuroBiotech Journal.2022; 6(3): 105.     CrossRef
  • Antibacterial Activity of Crocus sativus L. Petals Extracts against Foodborne Pathogenic and Spoilage Microorganisms, with a Special Focus on Clostridia
    Sara Primavilla, Cinzia Pagano, Rossana Roila, Raffaella Branciari, David Ranucci, Andrea Valiani, Maurizio Ricci, Luana Perioli
    Life.2022; 13(1): 60.     CrossRef
  • Screen-printed electrode modified by Au/NH2-MIL-125(Ti) composite for electrochemical sensing performance of gallic acid in green tea and urine samples
    K.V. Kavya, Stella Vargheese, Dhanaprabhu Pattappan, R.T. Rajendra Kumar, Yuvaraj Haldorai
    Chemical Physics Letters.2022; 807: 140074.     CrossRef
  • Discovery of a Novel Inhibitor Structure of Mycobacterium tuberculosis Isocitrate Lyase
    Changyuan Duan, Qihua Jiang, Xue Jiang, Hongwei Zeng, Qiaomin Wu, Yang Yu, Xiaolan Yang
    Molecules.2022; 27(8): 2447.     CrossRef
  • New Perspectives on the Sustainable Employment of Chestnut Shells as Active Ingredient against Oral Mucositis: A First Screening
    Ana Sofia Ferreira, Ana Margarida Silva, Diana Pinto, Manuela M. Moreira, Ricardo Ferraz, Jaroslava Švarc-Gajić, Paulo C. Costa, Cristina Delerue-Matos, Francisca Rodrigues
    International Journal of Molecular Sciences.2022; 23(23): 14956.     CrossRef
  • Gallic Acid Leads to Cell Death of Candida Albicans by the Apoptosis Mechanism
    Ito Liberato, Leticia A Lino, Juan K D Souza, João B A Neto, Livia G A V Sá, Vitória P F Cabral, Cecília R Silva, Bruno C Cavalcanti, Manoel O Moraes, Valder N Freire, Hélio V N Júnior, Claudia R Andrade
    Future Microbiology.2022; 17(8): 599.     CrossRef
  • Influence of Green Tea Added to Cherry Wine on Phenolic Content, Antioxidant Activity and Alpha-Glucosidase Inhibition during an In Vitro Gastrointestinal Digestion
    Małgorzata Lasik-Kurdyś, Małgorzata Gumienna, Barbara Górna, Noranizan Mohd Adzahan
    Foods.2022; 11(20): 3298.     CrossRef
  • Cytotoxic Effect of Puya chilensis Collected in Central Chile
    César Echeverria-Echeverria, Aly Valderrama-Villarroel, Marcelo Ortega, Rodrigo A. Contreras, Gustavo E. Zúñiga, Leonor Alvarado-Soto, Rodrigo Ramírez-Tagle
    Natural Product Communications.2022;[Epub]     CrossRef
  • Microwave-assisted functionalization of graphene oxide with amino acid behaviour on the chemical constituents and specific molecular pathways of pearl millet grains under saline conditions
    Noura E. Mahmoud, A.H. Hassan, Reda M. Abdelhameed
    Plant Nano Biology.2022; 2: 100020.     CrossRef
  • Effect of phenolic compounds and cold shock on survival and virulence of Escherichia coli pathotypes
    Ana L. Ríos‐López, Norma Heredia, Santos García, José Á. Merino‐Mascorro, Luisa Y. Solís‐Soto, Jorge E. Dávila‐Aviña
    Journal of Food Safety.2022;[Epub]     CrossRef
  • Tailored silver nanoparticles capped with gallic acid and its potential toxicity via ROS mediated pathway against osteosarcoma cells
    Shahnaz Majeed, Mohammed Danish, Norul Aini Zakariya, Rokiah Hashim, Mohammed Tahir Ansari, Sreenivas Patro Sisinthy
    Materials Today Communications.2022; 32: 103844.     CrossRef
  • Effects of antibacterial peptide-producing Bacillus subtilis, gallic acid, and cellulase on fermentation quality and bacterial community of whole-plant corn silage
    Zhiheng Zhang, Yuqin Wang, Saiqiao Wang, Lu Zhao, Binglei Zhang, Wanhang Jia, Zhenhan Zhai, Lingping Zhao, Yuanxiao Li
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • On the mechanism behind enhanced antibacterial activity of alkyl gallate esters against foodborne pathogens and its application in Chinese icefish preservation
    Yu-gang Shi, Run-run Zhang, Chen-min Zhu, Xian-rui Liang, Rammile Ettelaie, Lai Jiang, Shan Lin
    Food Microbiology.2021; 99: 103817.     CrossRef
  • Antimicrobial and antioxidant potential of a standardized Ayurvedic formulation explains its clinical efficacy as gargles in post-radiotherapy oral cancer patients
    Sandeep Chavan, Sushama Bhuvad, Bhagyashri Kumbhlakar, Jyoti Auti, Tanhaji Walunj, Shridevi Pathak, Rahul Tanpure, Shweta Gujar, Jagdish Shinde, Arvind Kulkarni, Vidya Gupta, Vineeta Deshmukh, Sadanand Sardeshmukh
    Journal of Herbal Medicine.2021; 30: 100510.     CrossRef
  • Anticariogenic activities of Libidibia ferrea, gallic acid and ethyl gallate against Streptococcus mutans in biofilm model
    Manuela Ribeiro Passos, Rafael Silva Almeida, Brenda Oliveira Lima, Jeisa Zielle de Souza Rodrigues, Nayara Silva de Macêdo Neres, Louise Soares Pita, Patrick D'Orleans Farias Marinho, Iago Almeida Santos, Jamile Pinheiro da Silva, Milena Cardoso Oliveira
    Journal of Ethnopharmacology.2021; 274: 114059.     CrossRef
  • Calcium‐Based Metal–Organic Frameworks and Their Potential Applications
    Shikai Xian, Yuhan Lin, Hao Wang, Jing Li
    Small.2021;[Epub]     CrossRef
  • Mixed biofilms of pathogenic Candida-bacteria: regulation mechanisms and treatment strategies
    Fazlurrahman Khan, Nilushi Indika Bamunuarachchi, Dung Thuy Nguyen Pham, Nazia Tabassum, Mohd Sajjad Ahmad Khan, Young-Mog Kim
    Critical Reviews in Microbiology.2021; 47(6): 699.     CrossRef
  • Green Approach in Synthesis of Bio-Inspired Materials
    Anamarija Stanković, Martina Medvidović-Kosanović, Jasminka Kontrec, Branka Njegić Džakula
    Crystals.2021; 11(10): 1243.     CrossRef
  • Calcium Oxalate and Gallic Acid: Structural Characterization and Process Optimization toward Obtaining High Contents of Calcium Oxalate Monohydrate and Dihydrate
    Silvija Šafranko, Sara Goman, Dominik Goman, Stela Jokić, Ida Delač Marion, Nives Matijaković Mlinarić, Atiđa Selmani, Martina Medvidović-Kosanović, Anamarija Stanković
    Crystals.2021; 11(8): 954.     CrossRef
  • Methyl gallate, gallic acid-derived compound, inhibit cell proliferation through increasing ROS production and apoptosis in hepatocellular carcinoma cells
    Chien-Yu Huang, Yu-Jia Chang, Po-Li Wei, Chin-Sheng Hung, Weu Wang, Irina V. Lebedeva
    PLOS ONE.2021; 16(3): e0248521.     CrossRef
  • Galla Chinensis, a Traditional Chinese Medicine: Comprehensive review of botany, traditional uses, chemical composition, pharmacology and toxicology
    Yuan-yuan Ren, Xiao-rui Zhang, Ting-na Li, Yi-jia Zeng, Jin Wang, Qin-wan Huang
    Journal of Ethnopharmacology.2021; 278: 114247.     CrossRef
  • Effects of Gallic Acid on Fermentation Parameters, Protein Fraction, and Bacterial Community of Whole Plant Soybean Silage
    Cheng Wang, Mingyang Zheng, Shuo Wu, Xuan Zou, Xiaoyang Chen, Liangfa Ge, Qing Zhang
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • In vitro antibacterial activity of Loxostylis alata extracts and isolated compounds against Salmonella species
    Dorcas A. Gado, Muna Ali Abdalla, Aroke S. Ahmed, Balungile Madikizela, Sanah M. Nkadimeng, Marthie M. Ehlers, Lyndy J. McGaw
    BMC Complementary Medicine and Therapies.2021;[Epub]     CrossRef
  • Impact of Foliar Application of Amino Acids on Total Phenols, Phenolic Acids Content of Different Mints Varieties under the Field Condition
    Živilė Tarasevičienė, Aloyzas Velička, Aurelija Paulauskienė
    Plants.2021; 10(3): 599.     CrossRef
  • Influence of Gallic Acid and Thai Culinary Essential Oils on Antibacterial Activity of Nisin against Streptococcus mutans
    Pimsumon Jiamboonsri, Pimpikar Kanchanadumkerng, Mohd Esa Norhaizan
    Advances in Pharmacological and Pharmaceutical Sciences.2021; 2021: 1.     CrossRef
  • Chinese gallnut (Galla chinensis) against Vibrio parahaemolyticus: In vitro activity and the use of medicated bath method to treat infected mud crab Scylla paramamosain
    Qingyang Wu, Yang Jiang, Enzhu Chen, Changkao Mu, Khor Waiho
    Aquaculture.2021; 539: 736632.     CrossRef
  • HPLC-PDA-ESI-MS/MS Profiling and Anti-Biofilm Potential of Eucalyptussideroxylon Flowers
    Mona M. Okba, Riham A. El-Shiekh, Mohammed Abu-Elghait, Mansour Sobeh, Rehab M. S. Ashour
    Antibiotics.2021; 10(7): 761.     CrossRef
  • Combating Biofilm by Targeting Its Formation and Dispersal Using Gallic Acid against Single and Multispecies Bacteria Causing Dental Plaque
    Aqel Albutti, Muhammad Shoaib Gul, Muhammad Faisal Siddiqui, Farhana Maqbool, Fazal Adnan, Ihsan Ullah, Ziaur Rahman, Sadia Qayyum, Muhammad Ajmal Shah, Muhammad Salman
    Pathogens.2021; 10(11): 1486.     CrossRef
  • Antimicrobial mechanism of alkyl gallates against Escherichia coli and Staphylococcus aureus and its combined effect with electrospun nanofibers on Chinese Taihu icefish preservation
    Yu-gang Shi, Run-run Zhang, Chen-min Zhu, Ming-feng Xu, Qing Gu, Rammile Ettelaie, Shan Lin, Yi-fan Wang, Xin-yi Leng
    Food Chemistry.2021; 346: 128949.     CrossRef
  • Chromatographic and Spectrophotometric Determination of Some Phenolic Compounds in Tridax procumbens Linn Stem
    Akinshola Olabamiji Akinola, Funmilayo Enitan Adelowo
    Chemistry Africa.2021; 4(1): 103.     CrossRef
  • Bacterial ClpP Protease Is a Potential Target for Methyl Gallate
    Dehong Zheng, Yanan Xu, Gaoqing Yuan, Xiaogang Wu, Qiqin Li
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • A coaxially structured trilayered gallic acid-based antioxidant vascular graft for treating coronary artery disease
    Ankita Das, Parvaiz Ahmad Shiekh, Ashok Kumar
    European Polymer Journal.2021; 143: 110203.     CrossRef
  • Efficacy of germination and probiotic fermentation on underutilized cereal and millet grains
    Savita Budhwar, Kashika Sethi, Manali Chakraborty
    Food Production, Processing and Nutrition.2020;[Epub]     CrossRef
  • 4-Ethoxybenzoic acid inhibits Staphylococcus aureus biofilm formation and potentiates biofilm sensitivity to vancomycin
    Mariya Campbell, Chih-Yun Cho, Andrew Ho, Jye-Yu Huang, Brooke Martin, Eric S. Gilbert
    International Journal of Antimicrobial Agents.2020; 56(3): 106086.     CrossRef
  • Potential effects of Psidium sp., Mangifera sp., Mentha sp. and its mixture (PEM) in reducing bacterial populations in biofilms, adherence and acid production of S. sanguinis and S. mutans
    Zaleha Shafiei, Zubaidah Haji Abdul Rahim, Koshy Philip, Nalina Thurairajah, Hashim Yaacob
    Archives of Oral Biology.2020; 109: 104554.     CrossRef
  • The effect of polyphenol-containing solutions on in situ biofilm formation on enamel and dentin
    Qingping Xi, Wiebke Hoth-Hannig, Shuli Deng, Xiaoting Jin, Baiping Fu, Matthias Hannig
    Journal of Dentistry.2020; 102: 103482.     CrossRef
  • Pharmacological Research Progress on Antimicrobial Infection of Gallic Acid
    娇 尹
    Advances in Clinical Medicine.2020; 10(12): 2940.     CrossRef
  • Anti-oxidant, anti-inflammatory, and anti-bacterial effects of extracts from Elaeagnus umbellata leaves obtained using different extract conditions
    Ha-Rin Kang, Jong-Kang Jung, Se-Ho Park, Jae-Yeul Lee, Seun-Ah Yang
    Korean Journal of Food Preservation.2020; 27(3): 374.     CrossRef
  • Comparative effects of nisin and monensin on pure cultures of rumen bacteria
    Ahu DEMİRTAŞ
    Veteriner Hekimler Derneği Dergisi.2020; 91(1): 1.     CrossRef
  • Effects of dietary gallic acid on growth performance, diarrhea incidence, intestinal morphology, plasma antioxidant indices, and immune response in weaned piglets
    L. Cai, Y.P. Li, Z.X. Wei, X.L. Li, X.R. Jiang
    Animal Feed Science and Technology.2020; 261: 114391.     CrossRef
  • Residues from the Brazilian pepper tree (Schinus terebinthifolia Raddi) processing industry: Chemical profile and antimicrobial activity of extracts against hospital bacteria
    Rodrigo Borges de Araujo Gomes, Erica Santana de Souza, Nataly Senna Gerhardt Barraqui, Cristina Luz Tosta, Ana Paula Ferreira Nunes, Ricardo Pinto Schuenck, Fabiana Gomes Ruas, José Aires Ventura, Paulo Roberto Filgueiras, Ricardo Machado Kuster
    Industrial Crops and Products.2020; 143: 111430.     CrossRef
  • Can an entomopathogenic nematode serve, as proxy for strongyles, in assessing the anthelmintic effects of phenolic compounds?
    Serge Yan Landau, Velayudhan Satheeja Santhi, Itamar Glazer, Liora Salame, Hussein Muklada, Manal Haj-Zaroubi, Safaa Awwad, Alex Markovics, Hassan Azaizeh
    Experimental Parasitology.2020; 209: 107811.     CrossRef
  • Polyphenols of Honeybee Origin with Applications in Dental Medicine
    Carmen Curuțiu, Lia Mara Dițu, Alexandru Mihai Grumezescu, Alina Maria Holban
    Antibiotics.2020; 9(12): 856.     CrossRef
  • Polyphenols Attenuate Highly-Glycosylated Haemoglobin-Induced Damage in Human Peritoneal Mesothelial Cells
    Carolina Sánchez-Rodríguez, Concepción Peiró, Leocadio Rodríguez-Mañas, Julián Nevado
    Antioxidants.2020; 9(7): 572.     CrossRef
  • IN VITRO ANTIMICROBIAL ACTIVITY OF NATURAL SUBSTANCES CONVENIENT FOR USE IN ANIMAL BREEDING INSTEAD OF ANTIBIOTICS
    Rudolf Kukla, Jaroslava Mazurova, Ilona Krovakova, Eva Slehova, Radek Sleha, Miroslav Rozkot, Lubomir Opletal
    Military Medical Science Letters.2020; 89(1): 2.     CrossRef
  • In vitro activities of Acacia nilotica (L.) Delile bark fractions against Oral Bacteria, Glucosyltransferase and as antioxidant
    Ali Mahmoud Muddathir, Ebtihal Abdalla M. Mohieldin, Tohru Mitsunaga
    BMC Complementary Medicine and Therapies.2020;[Epub]     CrossRef
  • Epigallocatechin gallate and gallic acid affect colonization of abiotic surfaces by oral bacteria
    Yi Wang, Antonia T.W. Lam
    Archives of Oral Biology.2020; 120: 104922.     CrossRef
  • Evaluation of the pharmacokinetic-pharmacodynamic integration of marbofloxacin in combination with methyl gallate against Salmonella Typhimurium in rats
    Biruk Tesfaye Birhanu, Eon-Bee Lee, Seung-Chun Park, Praveen Rishi
    PLOS ONE.2020; 15(6): e0234211.     CrossRef
  • Nickel‐Based Metal‐Organic Framework/Crosslinked Tubular Poly(3,4‐ethylenedioxythiophene) Composite as an Electrocatalyst for the Detection of Gallic Acid and Tinidazole
    Haixu Wang, Xiaogeng Feng, Xiangjie Bo, Ming Zhou, Liping Guo
    ChemElectroChem.2020; 7(19): 4031.     CrossRef
  • Anticariogenic activity of Nelumbo nucifera leaf extract in oral healthcare
    Haeng-Eun Lee, Man-Seok Han, Seoul-Hee Nam, Jungsoo Han
    Technology and Health Care.2019; 27(5): 487.     CrossRef
  • Optimization of antibacterial extract from lacquer tree (Rhus verniciflua Stokes) using response surface methodology and its efficacy in controlling edwardsiellosis of olive flounder (Paralichthys olivaceus)
    Jae-Woong Lim, Su-Mi Shin, Sung-Ju Jung, Mi Kyeong Lee, So Young Kang
    Aquaculture.2019; 502: 40.     CrossRef
  • Inactivation of Alpha-2-Macroglobulin by Photo-Illuminated Gallic Acid
    Tooba Siddiqui, Mohammad Khalid Zia, Syed Saqib Ali, Haseeb Ahsan, Fahim Halim Khan
    Journal of Fluorescence.2019; 29(4): 969.     CrossRef
  • The Modern Use of an Ancient Plant: Exploring the Antioxidant and Nutraceutical Potential of the Maltese Mushroom (Cynomorium Coccineum L.)
    Paolo Zucca, Sidonie Bellot, Antonio Rescigno
    Antioxidants.2019; 8(8): 289.     CrossRef
  • Gallic acid‐loaded electrospun cellulose acetate nanofibers as potential wound dressing materials
    Patcharaporn Wutticharoenmongkol, Pornchita Hannirojram, Pimchanok Nuthong
    Polymers for Advanced Technologies.2019; 30(4): 1135.     CrossRef
  • Interaction of Bovine Serum Albumin with Propyl Gallate and Methyl Gallate Investigated by Fluorescence Spectroscopy
    Seong‐June Lee, Han‐Gook Cho, Byeong‐Seo Cheong
    Bulletin of the Korean Chemical Society.2019; 40(4): 344.     CrossRef
  • Metal nanoparticles synthesis through natural phenolic acids
    Seyed Mohammad Amini, Abolfazl Akbari
    IET Nanobiotechnology.2019; 13(8): 771.     CrossRef
  • Reshaped as polyester-based nanoparticles, gallic acid inhibits platelet aggregation, reactive oxygen species production and multi-resistant Gram-positive bacteria with an efficiency never obtained
    Silvana Alfei, Maria Grazia Signorello, Anna Schito, Silvia Catena, Federica Turrini
    Nanoscale Advances.2019; 1(10): 4148.     CrossRef
  • Persulfated flavonoids accelerated re-endothelialization and improved blood compatibility for vascular medical implants
    Tarek M. Bedair, Hanan M. Bedair, Kyoung-Won Ko, Wooram Park, Yoon Ki Joung, Dong Keun Han
    Colloids and Surfaces B: Biointerfaces.2019; 181: 174.     CrossRef
  • Galla chinensisextracts and calcium induce remineralization and antibacterial effects of enamel in aStreptococcus mutansbiofilm model
    Eun-Jeong Kim, Bo-Hyoung Jin
    Journal of Korean Academy of Oral Health.2018; 42(3): 90.     CrossRef
  • Transcriptome analysis reveals GA induced apoptosis in HCT116 human colon cancer cells through calcium and p53 signal pathways
    Chen Yang, Xiaoyu Xie, Hu Tang, Xuyan Dong, Xiaodong Zhang, Fenghong Huang
    RSC Advances.2018; 8(22): 12449.     CrossRef
  • Antimicrobial and Cytotoxic Activity of Dihydrobenzofuran Neolignans
    Murilo J. Fukui, Herbert J. Dias, Marcela E. Severiano, Maria G. M. de Souza, Pollyanna F. de Oliveira, Sérgio R. Ambrósio, Carlos H. G. Martins, Denise C. Tavares, Antônio E. M. Crotti
    ChemistrySelect.2018; 3(6): 1836.     CrossRef
  • In Vitro Anthelmintic Activity of Methanolic Extract from Caesalpinia coriaria J. Willd Fruits against Haemonchus contortus Eggs and Infective Larvae
    X. De Jesús-Martínez, A. Olmedo-Juárez, J. Olivares-Pérez, A. Zamilpa, P. Mendoza de Gives, M. E. López-Arellano, S. Rojas-Hernández, A. Villa-Mancera, L. M. Camacho-Díaz, M. Cipriano-Salazar
    BioMed Research International.2018; 2018: 1.     CrossRef
  • Inhibiting foodborne pathogens Vibrio parahaemolyticus and Listeria monocytogenes using extracts from traditional medicine: Chinese gallnut, pomegranate peel, Baikal skullcap root and forsythia fruit
    Jian Wu, Katheryn M. Goodrich, Joseph D. Eifert, Michael L. Jahncke, Sean F. O’Keefe, Gregory E. Welbaum, Andrew P. Neilson
    Open Agriculture.2018; 3(1): 163.     CrossRef
  • Bioactivities of Phenolics by Focusing on Suppression of Chronic Diseases: A Review
    Fereidoon Shahidi, JuDong Yeo
    International Journal of Molecular Sciences.2018; 19(6): 1573.     CrossRef
  • Effects of gallic acid on signaling kinases in murine macrophages and immune modulation against Brucella abortus 544 infection in mice
    Alisha Wehdnesday Bernardo Reyes, Lauren Togonon Arayan, Huynh Tan Hop, Tran Xuan Ngoc Huy, Son Hai Vu, WonGi Min, Hu Jang Lee, Suk Kim
    Microbial Pathogenesis.2018; 119: 255.     CrossRef
  • Evaluation of phytotoxic activity of leaf and stem extracts and identification of a phytotoxic substance from Caesalpinia mimosoides Lamk.
    Sutjaritpan Boonmee, Arihiro Iwasaki, Kiyotake Suenaga, Hisashi Kato-Noguchi
    Theoretical and Experimental Plant Physiology.2018; 30(2): 129.     CrossRef
  • Production of phenolic compounds and biosugars from flower resources via several extraction processes
    Ly Thi Phi Trinh, Yong-Soo Choi, Hyeun-Jong Bae
    Industrial Crops and Products.2018; 125: 261.     CrossRef
  • Neuroprotective effects of paeoniflorin in neurodegenerative diseases of the central nervous system
    Azadeh Manayi, Sahar Omidpanah, Davide Barreca, Silvana Ficarra, Maria Daglia, Seyed Fazel Nabavi, Seyed Mohammad Nabavi
    Phytochemistry Reviews.2017; 16(6): 1173.     CrossRef
  • The specific anti-biofilm effect of gallic acid on Staphylococcus aureus by regulating the expression of the ica operon
    Meihui Liu, Xiaoxia Wu, Jianke Li, Liu Liu, Runguang Zhang, Dongyan Shao, Xiaodan Du
    Food Control.2017; 73: 613.     CrossRef
  • Inhibitory capacity of Rhus coriaria L. extract and its major component methyl gallate on Streptococcus mutans biofilm formation by optical profilometry: Potential applications for oral health
    Tomas Kacergius, Saleh Abu-Lafi, Agne Kirkliauskiene, Vika Gabe, Azmi Adawi, Mahmoud Rayan, Mutaz Qutob, Rimantas Stukas, Algirdas Utkus, Mouhammad Zeidan, Anwar Rayan
    Molecular Medicine Reports.2017; 16(1): 949.     CrossRef
  • α-Farnesene and ocimene induce metabolite changes by volatile signaling in neighboring tea ( Camellia sinensis ) plants
    Lanting Zeng, Yinyin Liao, Jianlong Li, Ying Zhou, Jinchi Tang, Fang Dong, Ziyin Yang
    Plant Science.2017; 264: 29.     CrossRef
  • Antimicrobial effect ofPrunus mumeextracts against cariogenic bacteria
    Jung-Sun Lee, Ki-Ho Chung
    Journal of Korean Academy of Oral Health.2017; 41(1): 65.     CrossRef
  • Marsdenia tenacissima extract suppresses tumor growth and angiogenesis in A20 mouse lymphoma
    Xingbin Dai, Yanhua Ji, Pengjun Jiang, Xuemei Sun
    Oncology Letters.2017; 13(5): 2897.     CrossRef
  • Gallic acid inhibits the growth of calf pulmonary arterial endothelial cells through cell death and glutathione depletion
    Woo Hyun Park
    Molecular Medicine Reports.2017; 16(5): 7805.     CrossRef
  • Protective effect of Gallic acid on doxorubicin-induced testicular and epididymal toxicity
    M.J. Olusoji, O. M. Oyeyemi, E. R. Asenuga, T. O. Omobowale, O. L. Ajayi, A. A. Oyagbemi
    Andrologia.2017; 49(4): e12635.     CrossRef
  • Derivatives of alkyl gallate triphenylphosphonium exhibit antitumor activity in a syngeneic murine model of mammary adenocarcinoma
    Liliana Peredo-Silva, Sebastián Fuentes-Retamal, Cristian Sandoval-Acuña, Mario Pavani, Juan D. Maya, Vicente Castro-Castillo, Matías Madrid-Rojas, Solange Rebolledo, Ulrike Kemmerling, Eduardo Parra, Jorge Ferreira
    Toxicology and Applied Pharmacology.2017; 329: 334.     CrossRef
  • Gallic acid induces G1 phase arrest and apoptosis of triple-negative breast cancer cell MDA-MB-231 via p38 mitogen-activated protein kinase/p21/p27 axis
    Hsiang-Lin Lee, Chun-Shiang Lin, Shao-Hsuan Kao, Ming-Chih Chou
    Anti-Cancer Drugs.2017; 28(10): 1150.     CrossRef
  • Gallic acid induces HeLa cell death via increasing GSH depletion rather than ROS levels
    Woo Hyun Park
    Oncology Reports.2017; 37(2): 1277.     CrossRef
  • Octyl gallate, a food additive with potential beneficial properties to treat Helicobacter pylori infection
    Vanessa Gonçalves Wolf, Cibele Bonacorsi, Maria Stella Gonçalves Raddi, Luiz Marcos da Fonseca, Valdecir Farias Ximenes
    Food & Function.2017; 8(7): 2500.     CrossRef
  • The Effect of Pelargonium endlicherianum Fenzl. root extracts on formation of nanoparticles and their antimicrobial activities
    Gökçe Şeker Karatoprak, Gamze Aydin, Berrak Altinsoy, Cevahir Altinkaynak, Müberra Koşar, Ismail Ocsoy
    Enzyme and Microbial Technology.2017; 97: 21.     CrossRef
  • Crystal structure dependent in vitro antioxidant activity of biocompatible calcium gallate MOFs
    Tania Hidalgo, Lucy Cooper, Martin Gorman, Tamara Lozano-Fernández, Rosana Simón-Vázquez, Georges Mouchaham, Jérome Marrot, Nathalie Guillou, Christian Serre, Pierre Fertey, África González-Fernández, Thomas Devic, Patricia Horcajada
    Journal of Materials Chemistry B.2017; 5(15): 2813.     CrossRef
  • Fluorescein isothiocyanate‐dyed mesoporous silica nanoparticles for tracking antioxidant delivery
    Ladan Rashidi, Fariba Ganji, Ebrahim Vasheghani‐Farahani
    IET Nanobiotechnology.2017; 11(4): 454.     CrossRef
  • Recent advances to accelerate re-endothelialization for vascular stents
    Tarek M Bedair, Mahmoud A ElNaggar, Yoon Ki Joung, Dong Keun Han
    Journal of Tissue Engineering.2017;[Epub]     CrossRef
  • On mechanism behind UV-A light enhanced antibacterial activity of gallic acid and propyl gallate against Escherichia coli O157:H7
    Qingyang Wang, Erick Falcao de Oliveira, Solmaz Alborzi, Luis J. Bastarrachea, Rohan V. Tikekar
    Scientific Reports.2017;[Epub]     CrossRef
  • Biofilms as “Connectors” for Oral and Systems Medicine: A New Opportunity for Biomarkers, Molecular Targets, and Bacterial Eradication
    Herman O. Sintim, Ulvi Kahraman Gürsoy
    OMICS: A Journal of Integrative Biology.2016; 20(1): 3.     CrossRef
  • Insoluble-Bound Phenolics in Food
    Fereidoon Shahidi, JuDong Yeo
    Molecules.2016; 21(9): 1216.     CrossRef
  • Use of organic acids for prevention and removal of Bacillus subtilis biofilms on food contact surfaces
    Meltem Yesilcimen Akbas, Seyda Cag
    Food Science and Technology International.2016; 22(7): 587.     CrossRef
  • Gallic acid as a selective anticancer agent that induces apoptosis in SMMC-7721 human hepatocellular carcinoma cells
    GUOJUN SUN, SHUQIN ZHANG, YANRU XIE, ZIYU ZHANG, WENJING ZHAO
    Oncology Letters.2016; 11(1): 150.     CrossRef
  • Gallic acid induces apoptosis in EGFR-mutant non-small cell lung cancers by accelerating EGFR turnover
    Boas Nam, Jin Kyung Rho, Dong-Myung Shin, Jaekyoung Son
    Bioorganic & Medicinal Chemistry Letters.2016; 26(19): 4571.     CrossRef
  • Improving succinic acid production by Actinobacillus succinogenes from raw industrial carob pods
    Margarida Carvalho, Christophe Roca, Maria A.M. Reis
    Bioresource Technology.2016; 218: 491.     CrossRef
  • Skin penetration and antioxidant effect of cosmeto-textiles with gallic acid
    C. Alonso, M. Martí, C. Barba, M. Lis, L. Rubio, L. Coderch
    Journal of Photochemistry and Photobiology B: Biology.2016; 156: 50.     CrossRef
  • Complexation and molecular modeling studies of europium(III)–gallic acid–amino acid complexes
    Mohamed Taha, Imran Khan, João A.P. Coutinho
    Journal of Inorganic Biochemistry.2016; 157: 25.     CrossRef
  • Galla chinensis Compounds Remineralize Enamel Caries Lesions in a Rat Model
    Tie-Ting Zhang, Hui-Jing Guo, Xue-Jun Liu, Jin-Pu Chu, Xue-Dong Zhou
    Caries Research.2016; 50(2): 159.     CrossRef
  • Single-molecule interaction force measurements of catechol analog monomers and synthesis of adhesive polymer using the results
    Shougo Kinugawa, Siqian Wang, Shu Taira, Akihiko Tsuge, Daisaku Kaneko
    Polymer Journal.2016; 48(6): 715.     CrossRef
  • Antioxidant activities of novel galloyl phytosterols evaluated by human erythrocytes with the aid of confocal microscopy imaging
    Songbai Liu, Huiying Hu, Cheng Li
    Journal of Functional Foods.2016; 22: 224.     CrossRef
  • Effects of aluminum oxide (Al2O3) nanoparticles on ECG, myocardial inflammatory cytokines, redox state, and connexin 43 and lipid profile in rats: possible cardioprotective effect of gallic acid
    El-Hussainy M.A. El-Hussainy, Abdelaziz M. Hussein, Azza Abdel-Aziz, Ibrahim El-Mehasseb
    Canadian Journal of Physiology and Pharmacology.2016; 94(8): 868.     CrossRef
  • Identification of gallic acid based glycoconjugates as a novel tubulin polymerization inhibitors
    Kapil Upadhyaya, Hamidullah Hamidullah, Kartikey Singh, Ashutosh Arun, Mahendra Shukla, Neetika Srivastava, Raghib Ashraf, Abhisheak Sharma, Rohit Mahar, Sanjeev K. Shukla, Jayanta Sarkar, Ravishankar Ramachandran, Jawahar Lal, Rituraj Konwar, Rama Pati T
    Organic & Biomolecular Chemistry.2016; 14(4): 1338.     CrossRef
  • Molecular Mechanisms of Inhibition of Streptococcus Species by Phytochemicals
    Soheila Abachi, Song Lee, H. Rupasinghe
    Molecules.2016; 21(2): 215.     CrossRef
  • Gallic acid grafting effect on delivery performance and antiglaucoma efficacy of antioxidant-functionalized intracameral pilocarpine carriers
    Shih-Feng Chou, Li-Jyuan Luo, Jui-Yang Lai
    Acta Biomaterialia.2016; 38: 116.     CrossRef
  • Plant Natural Products Targeting Bacterial Virulence Factors
    Laura Nunes Silva, Karine Rigon Zimmer, Alexandre José Macedo, Danielle Silva Trentin
    Chemical Reviews.2016; 116(16): 9162.     CrossRef
  • Antibiofilm Activity of Plant Polyphenols
    Lívia Slobodníková, Silvia Fialová, Katarína Rendeková, Ján Kováč, Pavel Mučaji
    Molecules.2016; 21(12): 1717.     CrossRef
  • Methyl gallate limits infection in mice challenged with Brucella abortus while enhancing the inflammatory response
    A.W.B. Reyes, D.G. Kim, H.L.T. Simborio, H.T. Hop, L.T. Arayan, W. Min, J.J. Lee, H.H. Chang, S. Kim
    Journal of Applied Microbiology.2016; 120(3): 552.     CrossRef
  • Identification and partial purification of antibacterial compounds againstStreptococcus mutansfromGalla Rhois
    Ae-Ri Shin, Seung-Ho Ohk, Choong-Ho Choi, Suk-Jin Hong
    Journal of Korean Academy of Oral Health.2016; 40(1): 3.     CrossRef
  • Co-Metabolic Degradation of β-Cypermethrin and 3-Phenoxybenzoic Acid by Co-Culture of Bacillus licheniformis B-1 and Aspergillus oryzae M-4
    Jiayuan Zhao, Yuanlong Chi, Yingchao Xu, Dongying Jia, Kai Yao, Pankaj Kumar Arora
    PLOS ONE.2016; 11(11): e0166796.     CrossRef
  • Green synthesis of gold and silver nanoparticles using gallic acid: catalytic activity and conversion yield toward the 4-nitrophenol reduction reaction
    Jisu Park, Song-Hyun Cha, Seonho Cho, Youmie Park
    Journal of Nanoparticle Research.2016;[Epub]     CrossRef
  • Characterization of the bioactive constituents of Nymphaea alba rhizomes and evaluation of anti-biofilm as well as antioxidant and cytotoxic properties
    Omar Bakr Riham, Wasfi Reham, Swilam Noha, Ezz Sallam Ibrahim
    Journal of Medicinal Plants Research.2016; 10(26): 390.     CrossRef
  • Selected dietary (poly)phenols inhibit periodontal pathogen growth and biofilm formation
    Muhammad Shahzad, Emma Millhouse, Shauna Culshaw, Christine A. Edwards, Gordon Ramage, Emilie Combet
    Food & Function.2015; 6(3): 719.     CrossRef
  • Commercial Lawsonia inermis L. dried leaves and processed powder: Phytochemical composition, antioxidant, antibacterial, and allelopathic activities
    Karima Dhaouadi, Walid Meliti, Sana Dallali, Manel Belkhir, Saloua Ouerghemmi, Houcine Sebei, Sami Fattouch
    Industrial Crops and Products.2015; 77: 544.     CrossRef
  • Bioavailability of Dietary Polyphenols and Gut Microbiota Metabolism: Antimicrobial Properties
    Laura Marín, Elisa M. Miguélez, Claudio J. Villar, Felipe Lombó
    BioMed Research International.2015; 2015: 1.     CrossRef
  • Use of natural substances for boar semen decontamination
    J. Mazurova, R. Kukla, M. Rozkot, A. Lustykova, E. Slehova, R. Sleha, J. Lipensky, L. Opletal
    Veterinární medicína.2015; 60(5): 235.     CrossRef
  • Green synthesis of gallic acid-coated silver nanoparticles with high antimicrobial activity and low cytotoxicity to normal cells
    Dan Li, Zuojia Liu, Ye Yuan, Yawen Liu, Fenglan Niu
    Process Biochemistry.2015; 50(3): 357.     CrossRef
  • Dietary Polyphenols in Prevention and Treatment of Prostate Cancer
    Rahul Lall, Deeba Syed, Vaqar Adhami, Mohammad Khan, Hasan Mukhtar
    International Journal of Molecular Sciences.2015; 16(2): 3350.     CrossRef
  • Anti-carious Effects ofGalla chinensis: A Systematic Review
    Tieting Zhang, Jinpu Chu, Xuedong Zhou
    Phytotherapy Research.2015; 29(12): 1837.     CrossRef
  • Optimization of metronidazole sustained-release films using D-optimal design
    Jomjai Peerapattana, Teeraphat Ngamsupsiri, Nopadol Cheucharoenvasuchai, Charnnarong Saikaew
    International Journal of Pharmaceutics.2015; 484(1-2): 1.     CrossRef
  • Isolation and characterization of gallic acid and methyl gallate from the seed coats of Givotia rottleriformis Griff. and their anti-proliferative effect on human epidermoid carcinoma A431 cells
    Samuel Kamatham, Naresh Kumar, Padmaja Gudipalli
    Toxicology Reports.2015; 2: 520.     CrossRef
  • Synthesis, Antiproliferative Activity and Molecular Properties Predictions of Galloyl Derivatives
    Marciane Maximo da Silva, Marina Comin, Thiago Santos Duarte, Mary Foglio, João De Carvalho, Maria Do Carmo Vieira, Anelise Nazari Formagio
    Molecules.2015; 20(4): 5360.     CrossRef
  • Molecular adaptation of Lactobacillus plantarum WCFS1 to gallic acid revealed by genome-scale transcriptomic signature and physiological analysis
    Inés Reverón, Blanca de las Rivas, Ruth Matesanz, Rosario Muñoz, Félix López de Felipe
    Microbial Cell Factories.2015;[Epub]     CrossRef
  • Inhibition of Gallic Acid on the Growth and Biofilm Formation of Escherichia coli and Streptococcus mutans
    Dongyan Shao, Jing Li, Ji Li, Ruihua Tang, Liu Liu, Junling Shi, Qingsheng Huang, Hui Yang
    Journal of Food Science.2015;[Epub]     CrossRef
  • Phenolic Compounds from Liquidambar formosana Fruits as Monoamine Oxidase Inhibitors
    Zhong-duo Yang, Ji-bei Liang, Wei-Wei Xue, Jie Sheng, Yin Shi, Xiao-Jun Yao, Jin Ren, Lian Liu
    Chemistry of Natural Compounds.2014; 50(6): 1118.     CrossRef
  • Design and straightforward synthesis of novel galloyl phytosterols with excellent antioxidant activity
    Yuanqing Fu, Yan Zhang, Huiying Hu, Ying Chen, Rong Wang, Duo Li, Songbai Liu
    Food Chemistry.2014; 163: 171.     CrossRef
  • Polyphenol-rich extract of Nelumbo nucifera leaves inhibits alcohol-induced steatohepatitis via reducing hepatic lipid accumulation and anti-inflammation in C57BL/6J mice
    Chang-Chieh Tang, Wea-Lung Lin, Yi-Ju Lee, Yu-Chi Tang, Chau-Jong Wang
    Food & Function.2014; 5(4): 678.     CrossRef
  • Isolation and characterization of antimicrobial compounds from Terminalia phanerophlebia Engl. & Diels leaf extracts
    B. Madikizela, M.A. Aderogba, J.F. Finnie, J. Van Staden
    Journal of Ethnopharmacology.2014; 156: 228.     CrossRef
  • Sucrose supplementation during traditional carob syrup processing affected its chemical characteristics and biological activities
    Karima Dhaouadi, Manel Belkhir, Ismail Akinocho, Faten Raboudi, David Pamies, Enrique Barrajón, Carmen Estevan, Sami Fattouch
    LWT - Food Science and Technology.2014; 57(1): 1.     CrossRef
  • Antimicrobial Activity of Antrodia camphorata Extracts against Oral Bacteria
    Hsiu-Man Lien, Chin-Jui Tseng, Chao-Lu Huang, Yu-Ting Lin, Chia-Chang Chen, Ya-Yun Lai, Yuan-Soon Ho
    PLoS ONE.2014; 9(8): e105286.     CrossRef
  • Inhibitory effect of the carnosine-gallic acid synthetic peptide on MMP-2 and MMP-9 in human fibrosarcoma HT1080 cells
    Sung-Rae Kim, Tae-Kil Eom, Hee-Guk Byun
    Journal of Peptide Science.2014; 20(9): 716.     CrossRef
  • Topical application of Gallic acid suppresses the 7,12-DMBA/Croton oil induced two-step skin carcinogenesis by modulating anti-oxidants and MMP-2/MMP-9 in Swiss albino mice
    Vimala Subramanian, Balaji Venkatesan, Anusha Tumala, Elangovan Vellaichamy
    Food and Chemical Toxicology.2014; 66: 44.     CrossRef
  • Gallic Acid Tailoring Surface Functionalities of Plasma-Polymerized Allylamine-Coated 316L SS to Selectively Direct Vascular Endothelial and Smooth Muscle Cell Fate for Enhanced Endothelialization
    Zhilu Yang, Kaiqin Xiong, Pengkai Qi, Ying Yang, Qiufen Tu, Jin Wang, Nan Huang
    ACS Applied Materials & Interfaces.2014; 6(4): 2647.     CrossRef
  • Antibacterial mechanisms of methyl gallate against Ralstonia solanacearum
    Wan-Wan Fan, Gao-Qing Yuan, Qi-Qin Li, Wei Lin
    Australasian Plant Pathology.2014; 43(1): 1.     CrossRef
  • Antiadherent activity of Schinus terebinthifolius and Croton urucurana extracts on in vitro biofilm formation of Candida albicans and Streptococcus mutans
    Dicler S.V. Barbieri, Fabiana Tonial, Patricia V.A. Lopez, Beatriz H.L.N. Sales Maia, Germana D. Santos, Marina O. Ribas, Chirlei Glienke, Vania A. Vicente
    Archives of Oral Biology.2014; 59(9): 887.     CrossRef
  • Antibacterial and Antidiarrheal Activities of Plant Products against Enterotoxinogenic Escherichia coli
    J. Dubreuil
    Toxins.2013; 5(11): 2009.     CrossRef
  • Anti-Depressant Like Effect of Methyl Gallate Isolated fromAcer barbinervein Mice
    Jin-Koo Lee
    The Korean Journal of Physiology & Pharmacology.2013; 17(5): 441.     CrossRef
  • Gallic acid provokes DNA damage and suppresses DNA repair gene expression in human prostate cancer PC‐3 cells
    Kuo‐Ching Liu, Heng‐Chien Ho, An‐Cheng Huang, Bin‐Chuan Ji, Hui‐Yi Lin, Fu‐Shin Chueh, Jai‐Sing Yang, Chi‐Cheng Lu, Jo‐Hua Chiang, Menghsiao Meng, Jing‐Gung Chung
    Environmental Toxicology.2013; 28(10): 579.     CrossRef
  • Antibacterial Effects of Galla Rhois Extract against Streptococcus suis Infection in Mice
    Chun-Nam Cha, Eun-Ah Yu, Eun-Kee Park, Hyunju Choi, Suk Kim, Hu Jang Lee
    Journal of Food Hygiene and Safety.2013; 28(2): 95.     CrossRef
  • Effect of Gallotannins Derived from Sedum takesimense on Tomato Bacterial Wilt
    Thuy Thu Vu, Jin-Cheol Kim, Yong Ho Choi, Gyung Ja Choi, Kyoung Soo Jang, Tae Ho Choi, Tae Mi Yoon, Seon-Woo Lee
    Plant Disease.2013; 97(12): 1593.     CrossRef
  • Catechin-incorporated dental copolymers inhibit growth of Streptococcus mutans
    Alexandra Mankovskaia, Celine M. Levesque, Anuradha Prakki
    Journal of Applied Oral Science.2013; 21(2): 203.     CrossRef
  • MAPK inhibitors augment gallic acid-induced A549 lung cancer cell death through the enhancement of glutathione depletion
    WOO HYUN PARK, SUHN HEE KIM
    Oncology Reports.2013; 30(1): 513.     CrossRef
  • Biomimetic Formation of Pd and Au-Pd Nanocomposites and their Catalytic Applications
    Nazmul H. Sarker, Stacey N. Barnaby, Aaron P. Dowdell, Nako Nakatsuka, Ipsita A. Banerjee
    Soft Materials.2013; 11(4): 403.     CrossRef
  • Construction of Polyfunctional Coatings Assisted by Gallic Acid to Facilitate Co-Immobilization of Diverse Biomolecules
    Zhilu Yang, Ying Yang, Wei Yan, Qiufen Tu, Jin Wang, Nan Huang
    ACS Applied Materials & Interfaces.2013; 5(21): 10495.     CrossRef
  • Antitumor activity of methyl gallate by inhibition of focal adhesion formation and Akt phosphorylation in glioma cells
    Sang-Hyun Lee, Jin Kyu Kim, Dae Won Kim, Hyun Sook Hwang, Won Sik Eum, Jinseu Park, Kyu Hyung Han, Joa Sub Oh, Soo Young Choi
    Biochimica et Biophysica Acta (BBA) - General Subjects.2013; 1830(8): 4017.     CrossRef
  • Antimetastatic activity and low systemic toxicity of tetradecyl gallate in a preclinical melanoma mouse model
    Claudriana Locatelli, Deborah Regina Carvalho, Alessandra Mascarello, Clarissa Amorin Silva de Cordova, Rosendo Augusto Yunes, Ricardo Jose Nunes, Celso Pilati, Tânia Beatriz Creczynski-Pasa
    Investigational New Drugs.2012; 30(3): 870.     CrossRef
  • Chemical composition of Galla chinensis extract and the effect of its main component(s) on the prevention of enamel demineralization in vitro
    Xue-Lian Huang, Ming-Dong Liu, Ji-Yao Li, Xue-Dong Zhou, Jacob M ten Cate
    International Journal of Oral Science.2012; 4(3): 146.     CrossRef
  • Anticoccidial effect of supplemental dietaryGalla Rhoisagainst infection withEimeria tenellain chickens
    Jin Ju Lee, Dong Hyeok Kim, Jeong Ju Lim, Dae Geun Kim, Wongi Min, Gon Sup Kim, Hu Jang Lee, Man Hee Rhee, Hyun Park, Sam Churl Kim, Hong Hee Chang, Suk Kim
    Avian Pathology.2012; 41(4): 403.     CrossRef
  • In Vitro Antibacterial Activity of Galls ofQuercus infectoriaOlivier against Oral Pathogens
    Dayang Fredalina Basri, Liy Si Tan, Zaleha Shafiei, Noraziah Mohamad Zin
    Evidence-Based Complementary and Alternative Medicine.2012; 2012: 1.     CrossRef
  • Involvement of reactive oxygen species and glutathione in gallic acid-induced human umbilical vein endothelial cell death
    WOO HYUN PARK, SUHN HEE KIM
    Oncology Reports.2012; 28(2): 695.     CrossRef
  • Gallic acid inhibits migration and invasion in human osteosarcoma U-2 OS cells through suppressing the matrix metalloproteinase-2/-9, protein kinase B (PKB) and PKC signaling pathways
    Ching-Lung Liao, Kuang-Chi Lai, An-Cheng Huang, Jai-Sing Yang, Jen-Jyh Lin, Shin-Hwar Wu, W. Gibson Wood, Jaung-Geng Lin, Jing-Gung Chung
    Food and Chemical Toxicology.2012; 50(5): 1734.     CrossRef
  • Gallic acid downregulates matrix metalloproteinase‐2 (MMP‐2) and MMP‐9 in human leukemia cells with expressed Bcr/Abl
    Ying‐Jung Chen, Long‐Sen Chang
    Molecular Nutrition & Food Research.2012; 56(9): 1398.     CrossRef
  • New hybrid materials based on layered double hydroxides and antioxidant compounds. Preparation, characterization and release kinetic studies
    Mihaela Silion, Doina Hritcu, Gabriela Lisa, Marcel Ionel Popa
    Journal of Porous Materials.2012; 19(3): 267.     CrossRef
  • The activity of ferulic and gallic acids in biofilm prevention and control of pathogenic bacteria
    Anabela Borges, Maria J. Saavedra, Manuel Simões
    Biofouling.2012; 28(7): 755.     CrossRef
  • Biomimetic growth of gallic acid–ZnO hybrid assemblies and their applications
    Nazmul H. Sarker, Stacey N. Barnaby, Karl R. Fath, Stephen H. Frayne, Nako Nakatsuka, Ipsita A. Banerjee
    Journal of Nanoparticle Research.2012;[Epub]     CrossRef
  • Inhibitory Effects of Chinese Medicinal Herbs on Plant-Pathogenic Bacteria and Identification of the Active Components from Gallnuts of Chinese Sumac
    C. T. Feng, H. J. Su, C. T. Chen, W. C. Ho, Y. R. Tsou, L. L. Chern
    Plant Disease.2012; 96(8): 1193.     CrossRef
  • Effectiveness of egg yolk immunoglobulin (IgY) against periodontal disease-causing Fusobacterium nucleatum
    F.X. Xu, Y.P. Xu, L.J. Jin, H. Liu, L.H. Wang, J.S. You, S.Y. Li, X.Y. Li
    Journal of Applied Microbiology.2012; 113(4): 983.     CrossRef
  • Enhancement of gallic acid-induced human pulmonary fibroblast cell death by N-acetyl cysteine and L-buthionine sulfoximine
    Bo Ra You, Woo Hyun Park
    Human & Experimental Toxicology.2011; 30(8): 992.     CrossRef
  • The Effects of Mitogen-Activated Protein Kinase Inhibitors or Small Interfering RNAs on Gallic Acid-Induced HeLa Cell Death in Relation to Reactive Oxygen Species and Glutathione
    Bo Ra You, Woo Hyun Park
    Journal of Agricultural and Food Chemistry.2011; 59(2): 763.     CrossRef
  • Surface modified dendrimers: Synthesis and characterization for cancer targeted drug delivery
    Anupama Sharma, Surya Prakash Gautam, Arun Kumar Gupta
    Bioorganic & Medicinal Chemistry.2011; 19(11): 3341.     CrossRef
  • Identification and Quantification of Phenolic Compounds in Bambangan (Mangifera pajang Kort.) Peels and Their Free Radical Scavenging Activity
    Fouad Abdulrahman Hassan, Amin Ismail, Azizah Abdulhamid, Azrina Azlan
    Journal of Agricultural and Food Chemistry.2011; 59(17): 9102.     CrossRef
  • Inhibition of Nitric Oxide Production by Ethyl Digallates Isolated from Galla Rhois in RAW 264.7 Macrophages
    Pil-Hoon Park, Jin Hur, Dong-Sung Lee, Youn-Chul Kim, Gil-Saeng Jeong, Dong-Hwan Sohn
    Biomolecules and Therapeutics.2011; 19(4): 419.     CrossRef
  • Gallic acid-induced lung cancer cell death is accompanied by ROS increase and glutathione depletion
    Bo Ra You, Sung Zoo Kim, Suhn Hee Kim, Woo Hyun Park
    Molecular and Cellular Biochemistry.2011; 357(1-2): 295.     CrossRef
  • Concentration of phenolic compounds in aqueous mate (Ilex paraguariensis A. St. Hil) extract through nanofiltration
    Aureanna Nairne Negrão Murakami, Renata Dias de Mello Castanho Amboni, Elane Schwinden Prudêncio, Edna Regina Amante, Laura de Moraes Zanotta, Marcelo Maraschin, José Carlos Cunha Petrus, Reinaldo Francisco Teófilo
    LWT - Food Science and Technology.2011; 44(10): 2211.     CrossRef
  • Effect ofWeissella cibariaonFusobacterium nucleatum-induced Interleukin-6 and Interleukin-8 Production in KB Cells
    Mi-Sun Kang, Hoi-Soon Lim, Seon-Mi Kim, Hyun-Chul Lee, Jong-Suk Oh
    Journal of Bacteriology and Virology.2011; 41(1): 9.     CrossRef
  • Gallic Acid Induces G2/M Phase Arrest of Breast Cancer Cell MCF-7 through Stabilization of p27Kip1 Attributed to Disruption of p27Kip1/Skp2 Complex
    Jeng-Dong Hsu, Shao-Hsuan Kao, Ting-Tsz Ou, Yu-Jen Chen, Yi-Ju Li, Chau-Jong Wang
    Journal of Agricultural and Food Chemistry.2011; 59(5): 1996.     CrossRef
  • Gallic acid–induced human pulmonary fibroblast cell death is accompanied by increases in ROS level and GSH depletion
    Bo Ra You, Woo Hyun Park
    Drug and Chemical Toxicology.2011; 34(1): 38.     CrossRef
  • Anticancer property of gallic acid in A549, a human lung adenocarcinoma cell line, and possible mechanisms
    Dharmendra K. Maurya, Nivedita Nandakumar, Thomas Paul Asir Devasagayam
    Journal of Clinical Biochemistry and Nutrition.2010; 48(1): 85.     CrossRef
  • Cistaceae aqueous extracts containing ellagitannins show antioxidant and antimicrobial capacity, and cytotoxic activity against human cancer cells
    Enrique Barrajón-Catalán, Salvador Fernández-Arroyo, Domingo Saura, Emilio Guillén, Alberto Fernández-Gutiérrez, Antonio Segura-Carretero, Vicente Micol
    Food and Chemical Toxicology.2010; 48(8-9): 2273.     CrossRef
  • Gallic acid inhibits the growth of HeLa cervical cancer cells via apoptosis and/or necrosis
    Bo Ra You, Hwa Jin Moon, Yong Hwan Han, Woo Hyun Park
    Food and Chemical Toxicology.2010; 48(5): 1334.     CrossRef
  • Heme oxygenase-1 mediated protective effect of methyl gallate on cadmium-induced cytotoxicity in cultured mouse mesangial cells
    Seok Ho Cha, Chang Kook Suh
    Molecular & Cellular Toxicology.2010; 6(2): 127.     CrossRef
  • Inhibitory Effect of Gallic Acid and Its Esters on 2,2′-Azobis(2-amidinopropane)hydrochloride (AAPH)-Induced Hemolysis and Depletion of Intracellular Glutathione in Erythrocytes
    Valdecir F. Ximenes, Mariana G. Lopes, Maicon Segalla Petrônio, Luis Octavio Regasini, Dulce H. Siqueira Silva, Luiz M. da Fonseca
    Journal of Agricultural and Food Chemistry.2010; 58(9): 5355.     CrossRef
  • Gallic acid-induced lung cancer cell death is related to glutathione depletion as well as reactive oxygen species increase
    Bo Ra You, Woo Hyun Park
    Toxicology in Vitro.2010; 24(5): 1356.     CrossRef
  • Rhus chinensisandGalla Chinensis– folklore to modern evidence: review
    Odilon Djakpo, Weirong Yao
    Phytotherapy Research.2010; 24(12): 1739.     CrossRef
  • Effects of methyl gallate and gallic acid on the production of inflammatory mediators interleukin-6 and interleukin-8 by oral epithelial cells stimulated with Fusobacterium nucleatum
    Mi-Sun Kang, Hee-Sook Jang, Jong-Suk Oh, Kyu-Ho Yang, Nam-Ki Choi, Hoi-Soon Lim, Seon-Mi Kim
    The Journal of Microbiology.2009; 47(6): 760.     CrossRef
  • Gallic Acid, an Active Constituent of Grape Seed Extract, Exhibits Anti-proliferative, Pro-apoptotic and Anti-tumorigenic Effects Against Prostate Carcinoma Xenograft Growth in Nude Mice
    Manjinder Kaur, Balaiya Velmurugan, Subapriya Rajamanickam, Rajesh Agarwal, Chapla Agarwal
    Pharmaceutical Research.2009; 26(9): 2133.     CrossRef
  • Comparative pharmacokinetic study of paeoniflorin after oral administration of pure paeoniflorin, extract of Cortex Moutan and Shuang-Dan prescription to rats
    Hao Wu, Zhenyu Zhu, Guoqing Zhang, Liang Zhao, Hai Zhang, Dongliang Zhu, Yifeng Chai
    Journal of Ethnopharmacology.2009; 125(3): 444.     CrossRef
UBCG2: Up-to-date bacterial core genes and pipeline for phylogenomic analysis
Jihyeon Kim , Seong-In Na , Dongwook Kim , Jongsik Chun
J. Microbiol. 2021;59(6):609-615.   Published online May 29, 2021
DOI: https://doi.org/10.1007/s12275-021-1231-4
  • 474 View
  • 0 Download
  • 188 Web of Science
  • 194 Crossref
AbstractAbstract PDF
Phylogenomic tree reconstruction has recently become a routine and critical task to elucidate the evolutionary relationships among bacterial species. The most widely used method utilizes the concatenated core genes, universally present in a single-copy throughout the bacterial domain. In our previous study, a bioinformatics pipeline termed Up-to-date Bacterial Core Genes (UBCG) was developed with a set of bacterial core genes selected from 1,429 species covering 28 phyla. In this study, we revised a new bacterial core gene set, named UBCG2, that was selected from the more extensive genome sequence set belonging to 3,508 species spanning 43 phyla. UBCG2 comprises 81 genes with nine Clusters of Orthologous Groups of proteins (COGs) functional categories. The new gene set and complete pipeline are available at http://leb.snu.ac.kr/ubcg2.

Citations

Citations to this article as recorded by  
  • Genomic Analysis, Metabolite Characterization, and Wheat Seedling Growth Promotion of Variovorax Endophyticus sp. nov., A Novel Endophyte from Wheat Root Tissue
    Jin Cheng, Feng Yang, Lingli Zhang, Jiaxin Zhao, Xue Zhang, Hongjiao Qiao, Zhiying Yan, Yinggang Luo, Yumei Dai
    Current Microbiology.2026;[Epub]     CrossRef
  • Proposal of Lactococcus intestinalis Sun et al. 2024 as a Later Heterotypic Synonym of Lactococcus muris Afrizal et al. 2023
    Xin-Yu Zhu, Chun Tao Gu
    Current Microbiology.2025;[Epub]     CrossRef
  • Genomic insights into drug resistance and virulence determinants in rare pyomelanin-producing clinical isolates of Acinetobacter baumannii
    Lipsa Panda, Krishnapriya GK, Ajit Ramesh Sawant, Santosh Kumar Singh, Minakshi Gupta, Sheela Devi C, P Shashikala, K Prashanth
    European Journal of Clinical Microbiology & Infectious Diseases.2025; 44(3): 533.     CrossRef
  • Taxonomic and genomic characterization of a siderophore-producing bacterium, Rhodoligotrophos ferricapiens sp. nov isolated from lettuce cultivation soil
    Yu-Jin Kim, Yong-Seok Kim, Chang-Jun Cha
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Streptomyces yaizuensis sp. nov., a berninamycin C-producing actinomycete isolated from sponge
    Miku Takahashi, Kanata Hoshino, Moriyuki Hamada, Tomohiko Tamura, Ryota Moriuchi, Hideo Dohra, Youji Nakagawa, Susumu Kokubo, Motoyuki Yamazaki, Hiroyuki Nakagawa, Masayuki Hayakawa, Shinya Kodani, Hideki Yamamura
    The Journal of Antibiotics.2025; 78(1): 35.     CrossRef
  • Proposal of Crystallibacter gen. nov., Crystallibacter permensis sp. nov. and Crystallibacter degradans sp. nov. for the salt-tolerant and aromatics degrading actinobacteria, and reclassification of Arthrobacter crystallopoietes as Crystallibacter crystal
    Elena G. Plotnikova, Elena V. Ariskina, Olga V. Yastrebova, Natalia V. Potekhina, Alexander N. Avtukh, Sergey V. Tarlachkov, Irina P. Starodumova, Lyubov V. Dorofeeva, Lyudmila I. Evtushenko
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Description and genomic characterization of Mangrovibrevibacter kandeliae gen. nov. sp. nov., a novel carotenoid-producing endophytic bacterium isolated from branch of mangrove plants
    Chengshao Zan, Zhouqing Zheng, Xiaohui Chen, Mingsheng Chen, Feina Li, Li Tuo
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Parasalinivibrio latis gen. nov., sp. nov., isolated from the distal gut of healthy farmed Asian Seabass (Lates calcarifer)
    Shuan Er, Melissa Soh, Adrian Low, Henning Seedorf
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Phenotypic and Complete Reference Whole Genome Sequence Analyses of Two Paenibacillus spp. Isolates from a Gray Wolf (Canis lupus) Gastrointestinal Tract
    Jessika L. Bryant, Jennifer McCabe, C. Cristoph Klews, MiCayla Johnson, Ariel N. Atchley, Thomas W. Cousins, Maya Barnard-Davidson, Kristina M. Smith, Mark R. Ackermann, Michael Netherland, Nur A. Hasan, Peter A. Jordan, Evan S. Forsythe, Patrick N. Ball,
    Veterinary Sciences.2025; 12(1): 51.     CrossRef
  • Flavobacterium magnesitis sp. nov. and Flavobacterium zubiriense sp. nov., two novel Flavobacterium species isolated from alkaline magnesite residues
    Leonor Matos, Lorrie Maccarrio, Ana Paula Chung, Diogo N. Proença, Søren Sørensen, Paula V. Morais, Romeu Francisco
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Ascidiimonas meishanensis sp. nov. and Leptobacterium meishanense sp. nov., two bacteria isolated from marine sediment in the East China Sea
    Hao Wang, Huiting Wang, Xinyu Liu, Dawoon Jung, Eun-Young Seo, Shan He, Weiyan Zhang, Lijian Ding
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Paenibacillus mesotrionivorans sp. nov., a Mesotrione-Degrading Strain Isolated from Soil
    Ye Song, Yan Wu, Leyao Chen, Luyao Ruan, Minglai Wan, Bin Liu, Jian He, Baolong Zhang
    Current Microbiology.2025;[Epub]     CrossRef
  • Genomic and phenotypic characterisation of Leeuwenhoekiella obamensis sp. nov., a novel marine bacterium isolated from the surface water of a Japanese fishing port
    Yuka Machii, Mao Tsukamoto, Takafumi Kataoka, Ryuji Kondo
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Comamonas halotolerans sp. nov., isolated from the faecal sample of a zoo animal, Naemorhedus caudatus
    Yerim Park, Bitnara Kim, Jihyeon Min, Woojun Park
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Gallibacterium faecale sp. nov., Isolated from Dairy Cow Feces
    Seoung Woo Ryu, Jeong Chan Moon, Byeong Seob Oh, Seung Yeob Yu, Jeong Eun Bak, Eun Seo Heo, Seung-Hwan Park, Se Won Kang, Jiyoung Lee, Mi-Kyung Lee, Mooyoung Jung, Yo Han Choi, Hyeun Bum Kim, Jae-Kyung Kim, Ju-Hoon Lee, Ju Huck Lee
    Current Microbiology.2025;[Epub]     CrossRef
  • Reference Whole Genome Sequence Analyses and Characterization of a Novel Carnobacterium maltaromaticum Distinct Sequence Type Isolated from a North American Gray Wolf (Canis lupus) Gastrointestinal Tract
    C. Cristoph Klews, Jessika L. Bryant, Jennifer McCabe, Ariel N. Atchley, Thomas W. Cousins, Maya Barnard-Davidson, Mark R. Ackermann, Michael Netherland, Nur A. Hasan, Peter A. Jordan, Evan S. Forsythe, Patrick N. Ball, Bruce S. Seal
    Veterinary Sciences.2025; 12(5): 410.     CrossRef
  • Genomic diversity and tracing of Paenibacillus larvae in Australia: implications for American foulbrood outbreak surveillance in low-diversity populations
    Paul Worden, Ashlea Webster, Khushbu Gandhi, Risha Gupta, Ania T. Deutscher, Michael Hornitzky, Daniel Ross Bogema
    Microbial Genomics .2025;[Epub]     CrossRef
  • Discovery of mono-ADP ribosylating toxins with high structural homology to Pseudomonas exotoxin A
    Geoffrey Masuyer, Alistair Taverner, Julia MacKay, Ana Rita Lima Marques, Yuye Wang, Tom Hunter, Keyi Liu, Randall J. Mrsny
    Communications Biology.2025;[Epub]     CrossRef
  • Biocontrol Effect of Bacillus velezensis D7-8 on Potato Common Scab and Its Complete Genome Sequence Analysis
    Yu Jiang, Pengfei He, Huihui Kong, Pengbo He, Yixin Wu, Guowen Tang, Ping Tang, Yining Di, Xingyu Li, Lufeng Liu, Shahzad Munir, Yueqiu He
    Microorganisms.2025; 13(4): 770.     CrossRef
  • House dust microbiome differentiation and phage-mediated antibiotic resistance and virulence dissemination in the presence of endocrine-disrupting chemicals and pharmaceuticals
    Shicong Du, Huiju Lin, Qiong Luo, Chung Ling Man, Sze Han Lai, Kin Fai Ho, Kenneth M. Y. Leung, Patrick K. H. Lee
    Microbiome.2025;[Epub]     CrossRef
  • Fulvimarina uroteuthidis sp. nov., isolated from a marine invertebrate and Uroteuthis (Photololigo) edulis
    Yea-Lin Moon, Kyung Hyun Kim, Jin-Sook Park
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Metabolic response of tellurite resistant Bacillus altitudinis strain 3W19 highlights the potential as a model organism for bioremediation
    Pedro Farias, Romeu Francisco, Lorrie Maccario, Jakob Herschend, Søren J. Sørensen, Paula V. Morais
    Scientific Reports.2025;[Epub]     CrossRef
  • Reclassification of Bifidobacterium faecale Choi et al. 2014 as a later heterotypic synonym of Bifidobacterium adolescentis Reuter 1963
    Shinnosuke Okuhama, Hidenori Takahashi, Yasunori Nakayama, Akihito Endo
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Taxonomic revision of the family Aurantimonadaceae: proposal of Dennerimonas gen. nov., Mesocryomonas gen. nov., Rathsackimonas gen. nov. and Plantimonas gen. nov., along with the reclassification of Jeongeupella Jiang et al. 2024 as a later heterotypic s
    Imed Sbissi, Hana Dali, Rihab Hamra, Emeni Boujemaa, Mohamed Aziz Haj Nasr, Faten Ghodhbane-Gtari, Maher Gtari
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Phylogenomics as baseline for taxonomy description: Amphibiibacter pelophylacis gen. nov., sp. nov., a novel taxon of the family Sphaerotilaceae, class Betaproteobacteria, isolated from the skin microbiota of Pelophylax perezi from different populations
    Sara Costa, Diogo Neves Proença, Isabel Lopes, Paula V. Morais
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Description of Flavobacterium fructosi sp. nov., Flavobacterium xylosi sp. nov. and Flavobacterium zhouii sp. nov., three new members of the genus Flavobacterium
    Dou Han, Lei-Lei Yang, Yu-Hua Xin, Qing Liu
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Enterococcus hailinensis sp. nov., Isolated from Traditional Chinese Pickle
    Ting-Yu Wang, Hao Wang, Chun Tao Gu
    Current Microbiology.2025;[Epub]     CrossRef
  • Genome-guided development of a bacterial two-strain system for low-temperature soil biocementation
    Karol Ciuchcinski, Grzegorz Czerwonka, Przemyslaw Decewicz, Zofia Godlewska, Katarzyna Misiolek, Katarzyna Zegadlo, Michal Styczynski, Lukasz Dziewit
    Applied Microbiology and Biotechnology.2025;[Epub]     CrossRef
  • Familial Reclassification Within Order Lysobacterales and Proposal of Four Novel Species
    Tengfei Ma, Haijiao Liu, Yafei Chen, Juan Liu, Chungen Piao, Han Xue, Risheng Xu, Yong Li
    Microorganisms.2025; 13(6): 1212.     CrossRef
  • Draft genome sequences of Thermus thermophilus strains isolated from Japanese hot springs
    Yu Sato, Masanori Hashino, Shintaro Maeno, Elinne Becket
    Microbiology Resource Announcements.2025;[Epub]     CrossRef
  • Structural basis of the catalytic and allosteric mechanism of bacterial acetyltransferase PatZ
    Jun Bae Park, Gwanwoo Lee, Yu-Yeon Han, Dongwook Kim, Kyoo Heo, Jeesoo Kim, Juhee Park, Hyosuk Yun, Chul Won Lee, Hyun-Soo Cho, Jong-Seo Kim, Martin Steinegger, Yeong-Jae Seok, Soung-Hun Roh
    Proceedings of the National Academy of Sciences.2025;[Epub]     CrossRef
  • Lacticaseibacillus suihuaensis sp. nov., Isolated from Traditional Chinese Pickle
    Xin-Yu Zhu, Chun Yan Li, Hao Wang, Chun Tao Gu
    Current Microbiology.2025;[Epub]     CrossRef
  • Idiomarina aminovorans sp. nov., a halophilic bacterium isolated from the Llamara salt pan in the Atacama Desert of northern Chile
    Christian Hintersatz, Luis Antonio Rojas, Sean Ting-Shyang Wei, Sabine Kutschke, Angela Thewes, Falk Lehmann, Rohan Jain, Katrin Pollmann
    Extremophiles.2025;[Epub]     CrossRef
  • Design of genus-specific semi-nested primers for simple and accurate identification of Enterobacter strains
    Sara Jordan, Joël F. Pothier, Pieter de Maayer, Kirk Broders, Brian H. Kvitko, Teresa A. Coutinho, Theo H. M. Smits
    BMC Microbiology.2025;[Epub]     CrossRef
  • Single cell viral tagging of Faecalibacterium prausnitzii reveals rare bacteriophages omitted by other techniques
    Danielle E. Campbell, Xiaofen Wu, Lindsey R. Hall, Dylan Lawrence, Jerome M. Molleston, Lawrence A. Schriefer, Lindsay Droit, James S. Weagley, Benjamin S. Olson, Joanna Rimmer, Miles Parkes, Scott A. Handley, Megan T. Baldridge
    Gut Microbes.2025;[Epub]     CrossRef
  • Lacticaseibacillus salsurae sp. nov. and Levilactobacillus muriae sp. nov., isolated from traditional Chinese pickle
    Si-Tong Song, Ting-Yu Wang, Xin-Yu Zhu, Chun Tao Gu
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Taxonomic rearrangement of Salinibacterium, Leifsonia, Diaminobutyricibacter, Antiquaquibacter, Homoserinimonas and Glaciibacter: refining genus boundaries and proposal of two new genera – Orlajensenia gen. nov. and Leifsonella gen. nov.
    Maher Gtari, Dhouha Boussoufa, Faten Ghodhbane-Gtari, Imed Sbissi
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Bacteroides celer sp. nov. and Bacteroides mucinivorans sp. nov., isolated from human feces, and the reclassification of Bacteroides koreensis Shin et al. 2017 and Bacteroides kribbi Shin et al. 2017 as later heterotypic synonyms of Bacteroides ovatus Egg
    Ah-In Yang, Bora Kim, Woorim Kang, Hae-In Joe, Na-Ri Shin
    Journal of Microbiology.2025; 63(6): e2502006.     CrossRef
  • Pseudomonas lyxosi sp. nov., Pseudomonas arabinosi sp. nov. and Pseudomonas frigoris sp. nov., isolated from glaciers
    Chan Zhao, Yu-Hua Xin, Qing Liu
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Paenibacillus nanchangensis sp. nov., a Nitrogen-Fixing Strain Isolated from Agricultural Soil
    Yan Wu, Leyun Dong, Bingbing Weng, Xiaozhen Shi, Ningning Wu, Jian He, Zongzhuan Shen, Jiandong Jiang, Qirong Shen
    Current Microbiology.2025;[Epub]     CrossRef
  • Unicore Enables Scalable and Accurate Phylogenetic Reconstruction with Structural Core Genes
    Dongwook Kim, Sukhwan Park, Martin Steinegger, Caroline zz Puente-Lelievre
    Genome Biology and Evolution.2025;[Epub]     CrossRef
  • Haloimpatiens sporogenes sp. nov. and Haloimpatiens myeolchijeotgali sp. nov., anaerobic bacteria isolated from Myeolchi-jeot, a traditional Korean fermented anchovy
    Yu Jeong Lee, Byung Hee Chun
    Journal of Microbiology.2025; 63(7): e2504009.     CrossRef
  • Ewingella docleensis sp. nov. isolated from artisanal Montenegrin komanski cheese
    Beatriz Daza Prieto, Nadja Raicevic, Patrick Hyden, Adriana Cabal, Johann Ladstätter, Susanne Richter, Anna Stoeger, Robert L. Mach, Aleksandra Martinovic, Werner Ruppitsch
    The Microbe.2025; 8: 100449.     CrossRef
  • Faecalibacterium langellae sp. nov. isolated from human faeces
    Adeline Ang, Véronique Robert, Atsushi Hisatomi, Masahiro Hirasaki, Shintaro Maeno, Moriya Ohkuma, Mitsuo Sakamoto, Jean-Marc Chatel, Akihito Endo
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Genome-based reclassification of the genus Lactococcus and two novel species Pseudolactococcus yaeyamensis gen. nov., sp. nov. and Lactovum odontotermitis sp. nov. isolated from the gut of termites
    Kota Abe, Masahiro Yuki, Yumiko Imagawa, Atsushi Hisatomi, Moriya Ohkuma, Mitsuo Sakamoto, Satoko Noda
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Genome-Wide Insights into Streptomyces Novel Species Qhu-G9 and Its Potential for Enhancing Salt Tolerance and Growth in Avena sativa L. and Onobrychis viciifolia Scop
    Xin Xiang, Xiaolan Ma, Hengxia Yin, Liang Chen, Jiao Li, Wenjing Li, Shuhan Zhang, Chenghang Sun, Benyin Zhang
    Plants.2025; 14(14): 2135.     CrossRef
  • Bradyrhizobium tunisiense sp. nov., a novel rhizobial species isolated from Acacia saligna nodules
    Jihed Hsouna, Houda Zouagui, Takwa Gritli, Houda Ilahi, Jia-Cheng Han, Muhammad Sulman, Walid Ellouze, Xiao Xia Zhang, Maroua Mansouri, Mustapha Missbah El Idrissi, Soufiane Alami, Pierre Emmanuel Courty, Daniel Wipf, Abdelkader Bekki, James T. Tambong, B
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Distribution of Iron Importers and Ecological Traits in Pseudomonas Species Highlights the Potential Role of Efe System in Plant‐Related Environments
    Kenji Okumura, Kohei Ogura, Wataru Hashimoto
    Environmental Microbiology.2025;[Epub]     CrossRef
  • Genetic Characterization and Symbiotic Performance of Soybean Rhizobia Under Cold and Water-Deficient Conditions in Poland
    Riku Watanabe, Maria Daniela Artigas Ramirez, Shin-ichiro Agake, Sonoko Dorothea Bellingrath-Kimura, Sylwia Lewandowska, Yuki Onishi, Yohei Nishikawa, Haruko Takeyama, Michiko Yasuda, Naoko Ohkama-Ohtsu
    Plants.2025; 14(12): 1786.     CrossRef
  • Fulvimonas Volatilium sp. nov., Isolated from the Volatile Organic Compounds Treatment System
    Shaofeng Zhou, Yanjin Li, Tongchu Deng, Ling Zhang, Meiying Xu
    Current Microbiology.2025;[Epub]     CrossRef
  • Reclassification of Pseudomonas boreopolis Gray and Thornton 1928 (Approved Lists 1980) as Xanthomonas boreopolis comb. nov. and Pseudomonas carboxydohydrogena (ex Sanjieva and Zavarzin 1971) Meyer et al. 1980 as Afipia carboxydohydrogena comb. nov. based
    Mehdi Fatahi-Bafghi
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Comprehensive genomic analysis of Sinorhizobium meliloti isolates associated with fenugreek (Trigonella foenum-graecum Linn.) from diverse agroclimatic regions of India
    Mitesh Khairnar, Saleh S. Alhewairini, Swapnil Chandrakant Kajale, Vagish Dwibedi, Jayanthi Barasarathi, Andrea Mastinu, Riyaz Sayyed
    Chemical and Biological Technologies in Agriculture.2025;[Epub]     CrossRef
  • Aureibaculum koreense sp. nov. and Aureibaculum conchae sp. nov., isolated from the marine molluscs
    Soo-Bin Kim, Kyung Hyun Kim, Jin-Sook Park
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Genome-based classification of Paraniabella aurantiaca gen. nov., sp. nov., isolated from soil and taxonomic reclassification of five species within the genus Niabella
    Yong-Seok Kim, Yerang Yang, Miryung Kim, Do-Hoon Lee, Chang-Jun Cha
    Journal of Microbiology.2025; 63(10): e2505005.     CrossRef
  • Ruegeria discodermiae sp. nov., Ruegeria jejuensis sp. nov., and Ruegeria hyattellae sp. nov., Isolated from Marine Sponges
    Yea-Lin Moon, Kyung Hyun Kim, Ji-Yoon Shin, Jin-Sook Park
    Current Microbiology.2025;[Epub]     CrossRef
  • Unexplored diversity and potential functions of extra-chromosomal elements
    Haoyu Liu, Jia Sun, JuanJuan Si, Yi Liao, Jiaqi Bai, Xia Li, Limin Wang, Kuojun Cai, Wei Ni, Ping Zhou, Shengwei Hu, Juliette Hayer
    mSystems.2025;[Epub]     CrossRef
  • Microbulbifer discodermiae sp. nov. and Microbulbifer jejuensis sp. nov., isolated from marine sponges
    Yea-Lin Moon, Jin-Sook Park
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • A Horizontally Transferred Alginate Metabolism Gene Cluster in the Human Gut Genus Bacteroides
    Yuki Miyamoto, Natsuko Katsuhiro, Kenji Okumura, Ryuichi Takase, Daisuke Watanabe, Kohei Ogura, Wataru Hashimoto
    Journal of Applied Glycoscience.2025; 72(4): n/a.     CrossRef
  • Lactiplantibacillus koreensis sp. nov. and Lactiplantibacillus kimchii sp. nov., isolated from kimchi, a traditional Korean fermented food
    Min Ji Lee, Jisu Lee, Sohee Nam, Mi-Ja Jung, Yeon Bee Kim, Yujin Kim, Jeong Ui Yun, Seong Woon Roh, Tae Woong Whon, Che Ok Jeon, Se Hee Lee
    Journal of Microbiology.2025; 63(11): e2507007.     CrossRef
  • Comparative genome analysis of the Sphaerotilus-Leptothrix group supports the unification of the genera Sphaerotilus and Leptothrix into a single emended genus Sphaerotilus
    Dmitry D. Smolyakov, Alexey V. Beletsky, Tatyana S. Rudenko, Maria V. Gureeva, Nikolai V. Ravin, Margarita Y. Grabovich
    Systematic and Applied Microbiology.2025; 48(6): 126666.     CrossRef
  • Paraburkholderia suaedae sp. nov., a Potential Plant Growth-Promoting Bacterium Isolated from the Halophyte Suaeda japonica
    Sunho Park, Hyunji Lee, Subin Yook, Chunghwan Baek, Jisu Kim, Seunghui Kwak, Taeho Na, Taegun Seo
    Microorganisms.2025; 13(11): 2498.     CrossRef
  • Acquisition of novel antibiotic resistance genes by the bacterial predator Bacteriovorax sp. As-1
    Fathrinah Binti Kohadie, Young-Ung Heo, Wonsik Mun, Sumin Choi, Sinseong Park, Yoonhang Lee, Do-Hyung Kim, Robert J Mitchell
    The ISME Journal.2025;[Epub]     CrossRef
  • Four novel species of the genus Aquimarina isolated from marine sponges: Aquimarina callyspongiae sp. nov., Aquimarina mycalae sp. nov., Aquimarina discodermiae sp. nov., and Aquimarina penaris sp. nov
    Yea-Lin Moon, Seung-Min Han, Kyung Hyun Kim, Jin-Sook Park
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Genomic characterisation and gene editing of Marinibacterium sp. CCB-SX1 as a new marine chassis for polyhydroxyalkanoate production
    Sixu Gong, Noorizan Miswan, Nur Hanani Arif Shah, Siti Nor Syairah Anis, Amirul Al-Ashraf Abdullah, Nyok-Sean Lau
    International Journal of Biological Macromolecules.2025; 334: 149133.     CrossRef
  • Whole-genome sequencing of Nocardiopsis sp. B33, an alkali-halo-tolerant and moderately thermotolerant plant growth-promoting strain from Algerian Saharan soil: an in vitro and in silico study
    Noureddine Bouras, Mónica Majo-Cuervo, Atika Meklat, Lorena Carro, Affaf Laassami, Esther Menéndez, Imen Nouioui
    Biocatalysis and Agricultural Biotechnology.2025; 70: 103829.     CrossRef
  • Phylogenomic insights into a psychrotolerant, plant growth-promoting strain of Pseudomonas marginalis isolated from Xinantécatl volcano
    José Germán Serrano-Gamboa, José Tomás Tavarez-Arriaga, Mario L. Iza-Arteaga, Martín Romualdo Ide-Pérez, Irán Tapia-Vázquez, Jorge L. Folch-Mallol
    Gene Reports.2025; 41: 102356.     CrossRef
  • Comparative Genomics of DH5α-Inhibiting Escherichia coli Isolates from Feces of Healthy Individuals Reveals Common Co-Occurrence of Bacteriocin Genes with Virulence Factors and Antibiotic Resistance Genes
    Shuan Er, Yichen Ding, Linda Wei Lin Tan, Yik Ying Teo, Niranjan Nagarajan, Henning Seedorf
    Antibiotics.2025; 14(9): 860.     CrossRef
  • Longitudinal gut microbiota tracking reveals the dynamics of horizontal gene transfer
    Haoran Peng, Sergio Andreu-Sanchez, Angel J. Ruiz-Moreno, Asier Fernández-Pato, Jiafei Wu, Ranko Gacesa, Alexandra Zhernakova, Daoming Wang, Jingyuan Fu
    Nature Communications.2025;[Epub]     CrossRef
  • Variovorax arabinosiphilus sp. nov., Variovorax flavidus sp. nov., Variovorax gracilis sp. nov., Variovorax brevis sp. nov., Variovorax jilinensis sp. nov., Variovorax davisae sp. nov., Variovorax saccharolyticus sp. nov. and Variovorax fucos
    Yu-Hang Jiang, Ce-Ce Yin, Lei-Lei Yang, Yu-Hua Xin, Qing Liu, Jian Ye
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Rubrivirga aquatilis sp. nov. and Rubrivirga halophila sp. nov., isolated from Korean coastal surface seawater
    Jisoo Han, Yeonjung Lim, Mirae Kim, Jang-Cheon Cho
    Journal of Microbiology.2025; 63(8): e2504017.     CrossRef
  • The Isolation and Characterization of a Novel Psychrotolerant Cellulolytic Bacterium, Microbacterium sp. QXD-8T
    Peng An, Changjialian Yang, Wei Li, Dahe Zhao, Hua Xiang
    Microorganisms.2024; 12(2): 303.     CrossRef
  • Isolation of highly copper-resistant bacteria from deep-sea hydrothermal fields and description of a novel species Marinobacter metalliresistant sp. nov
    Tong Yu, Meng Qin, Zongze Shao, Yuemei Zhao, Xiang Zeng
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • Phenazines are involved in the antagonism of a novel subspecies of Pseudomonas chlororaphis strain S1Bt23 against Pythium ultimum
    Sylvia I. Chi, Mercy Akuma, Renlin Xu, Véronique Plante, Mehri Hadinezhad, James T. Tambong
    Scientific Reports.2024;[Epub]     CrossRef
  • Isoptericola haloaureus sp. nov., a dimorphic actinobacterium isolated from mangrove sediments of southeast India, implicating biosaline agricultural significance through nitrogen fixation and salt tolerance genes
    Munisamy Prathaban, Ragothaman Prathiviraj, Mythili Ravichandran, Sharmila Devi Natarajan, Murugesan Sobanaa, S. Hari Krishna Kumar, Varadharaju Chandrasekar, Joseph Selvin
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Azotosporobacter soli gen. nov., sp. nov., a novel nitrogen-fixing bacterium isolated from paddy soil
    Cheng-Jie Xie, Ling Yao, Rong Tang, Shuang Han, Shang Yang, Hend Alwathnani, Christopher Rensing, Guo-Hong Liu, Shun-Gui Zhou
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Veillonella faecalis sp. nov., a propionic acid-producing bacterium isolated from the faeces of an infant
    Haneol Yang, Hana Jo, Seung Hyun Kim, Chan-Seok Yun, Seung-Hwan Park, Doo-Sang Park
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Rhizobium hidalgonense and Rhizobium redzepovicii as faba bean (Vicia faba L.) microsymbionts in Mexican soils
    Flor N. Rivera Ortuña, Joseph Guevara-Luna, Jun Yan, Eloisa Lopez Amezcua, Ivan Arroyo-Herrera, Yan Li, Maria Soledad Vásquez-Murrieta, Danae Rojas Arellano, En Tao Wang
    Archives of Microbiology.2024;[Epub]     CrossRef
  • Chitiniphilus purpureus sp. nov., a novel chitin-degrading bacterium isolated from crawfish pond sediment
    Kaiyang Li, Xiong Luo, Rongrong Fan, Zhuoran Ding, Shixue Zheng, Zhengjun Chen
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Augmenting bacterial similarity measures using a graph-based genome representation
    Vivek Ramanan, Indra Neil Sarkar, Sergio Baranzini
    mSystems.2024;[Epub]     CrossRef
  • Flavobacterium rivulicola sp. nov., Isolated from a Freshwater Stream
    Sumin Kim, Miri S. Park, Ilnam Kang, Jang-Cheon Cho
    Current Microbiology.2024;[Epub]     CrossRef
  • The genome of a new Halorubrum distributum strain ICIS4 isolated from the culture of a microalga Dunaliella salina
    Е. А. Selivanova, А. S. Balkin, Yu. А. Khlopko, V. Ya. Kataev, А. О. Plotnikov
    Microbiology.2024; 93(4): 444.     CrossRef
  • Biological Control of Streptomyces sp. PR69 Against Phytophthora capsici and Its Growth-Promoting Effects on Plants
    Perla Karina López-Reyes, Susana De la Torre-Zavala, María Mercedes Cortés-González, Luis Jesús Galán-Wong, Hamlet Avilés-Arnaut
    Horticulturae.2024; 10(12): 1365.     CrossRef
  • Pectobacterium punjabense Causing Blackleg and Soft Rot of Potato: The First Report in the Russian Federation
    Anna A. Vasilyeva, Peter V. Evseev, Alexandr N. Ignatov, Fevzi S.-U. Dzhalilov
    Plants.2024; 13(15): 2144.     CrossRef
  • Taxonogenomic analysis of the Xanthomonas translucens complex leads to the descriptions of Xanthomonas cerealis sp. nov. and Xanthomonas graminis sp. nov.
    James T. Tambong, Renlin Xu, Maria Constanza Fleitas, Randy Kutcher
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Parendozoicomonas callyspongiae sp. nov. Isolated from a Marine Sponge, Callyspongia elongate, and Reclassification of Sansalvadorimonas verongulae as Parendozoicomonas verongulae comb. nov.
    Soo-Bin Kim, Kyung Hyun Kim, Jin-Sook Park
    Current Microbiology.2024;[Epub]     CrossRef
  • Congregibacter variabilis sp. nov. and Congregibacter brevis sp. nov. Within the OM60/NOR5 Clade, Isolated from Seawater, and Emended Description of the Genus Congregibacter
    Hyeonsu Tak, Miri S. Park, Hyerim Cho, Yeonjung Lim, Jang-Cheon Cho
    Journal of Microbiology.2024; 62(9): 739.     CrossRef
  • Analysis of Whole-Genome facilitates rapid and precise identification of fungal species
    Guihong Qi, Lijun Hao, Tianyi Xin, Yutong Gan, Qian Lou, Wenjie Xu, Jingyuan Song
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • Transformation of hydroxylated polychlorinated biphenyls by bacterial 2-hydroxybiphenyl 3-monooxygenase
    Jachym Suman, Kamila Sredlova, Serena Fraraccio, Martina Jerabkova, Michal Strejcek, Hana Kabickova, Tomas Cajthaml, Ondrej Uhlik
    Chemosphere.2024; 349: 140909.     CrossRef
  • Commensalibacter nepenthis sp. nov. and Commensalibacter oyaizuii sp. nov., from fluid in a Nepenthes pitcher cup and a butterfly (Junonia lemonias) in Thailand
    Pattaraporn Yukphan, Piyanat Charoenyingcharoen, Supattra Muangham, Wuttichai Mhuantong, Yuzo Yamada
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Lapidilactobacillus salsurivasis sp. nov., Secundilactobacillus muriivasis sp. nov., and Streptococcus parasalivarius sp. nov., isolated from Traditional Chinese Pickle
    Ting-Yu Wang, Chun Yan Li, Hao Wang, Chun Tao Gu
    Current Microbiology.2024;[Epub]     CrossRef
  • Comparative pangenome analysis of Enterococcus faecium and Enterococcus lactis provides new insights into the adaptive evolution by horizontal gene acquisitions
    Dae Gyu Choi, Ju Hye Baek, Dong Min Han, Shehzad Abid Khan, Che Ok Jeon
    BMC Genomics.2024;[Epub]     CrossRef
  • Staphylococcus hsinchuensis sp. nov., Isolated from Soymilk
    Yu-Ting Wang, Yu-Chun Lin, Yi-Huei Hsieh, Yu-Tzu Lin, Moriyuki Hamada, Chih-Chieh Chen, Jong-Shian Liou, Ai-Yun Lee, Wei-Ling Zhang, Yung-Tsung Chen, Chien-Hsun Huang
    Pathogens.2024; 13(4): 343.     CrossRef
  • Update on the proposed minimal standards for the use of genome data for the taxonomy of prokaryotes
    Raúl Riesco, Martha E. Trujillo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Rhizobium aouanii sp. nov., efficient nodulating rhizobia isolated from Acacia saligna roots in Tunisia
    Jihed Hsouna, Takwa Gritli, Houda Ilahi, Jia-Cheng Han, Walid Ellouze, Xiao Xia Zhang, Maroua Mansouri, Praveen Rahi, Mustapha Missbah El Idrissi, Mouad Lamrabet, Pierre Emmanuel Courty, Daniel Wipf, Abdelkader Bekki, James T. Tambong, Bacem Mnasri
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Paralimibaculum aggregatum gen. nov. sp. nov. and Biformimicrobium ophioploci gen. nov. sp. nov., two novel heterotrophs from brittle star Ophioplocus japonicus
    Keisuke Kawano, Tatsuya Awano, Arata Yoshinaga, Junji Sugiyama, Shigeki Sawayama, Satoshi Nakagawa
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Characterization and Genomic Analysis of Affinirhizobium gouqiense sp. nov. Isolated from Seawater of Gouqi Island Located in the East China Sea and Reclassification of Rhizobium lemnae to the Genus Affinirhizobium as Affinirhizobium lemnae comb. nov.
    Min He, Gen Chen, Ke-Jing Li, Xing-Xing Tang, Xiao-Xiao Liu, Chang-Bin Ren, Hou-Hong Liu, Hai Luo, Sanjit Chandra Debnath, Pin-Mei Wang, Hai-Xin Chen, Dao-Qiong Zheng
    Current Microbiology.2024;[Epub]     CrossRef
  • Eubacterium album sp. nov., a butyrate-producing bacterium isolated from faeces of a healthy human
    Feng-Lan Liu, Rashidin Abdugheni, Cong-Guo Ran, Nan Zhou, Shuang-Jiang Liu
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Lentzea sokolovensis sp. nov., Lentzea kristufekii sp. nov. and Lentzea miocenica sp. nov., rare actinobacteria from Miocene lacustrine sediment of the Sokolov Coal Basin, Czech Republic
    Ana Catalina Lara, Lucie Kotrbová, Moritz Keller, Imen Nouioui, Meina Neumann-Schaal, Yvonne Mast, Alica Chroňáková
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Rhodoferax potami sp. nov. and Rhodoferax mekongensis sp. nov., isolated from the Mekong River in Thailand
    Supattra Kitikhun, Piyanat Charoenyingcharoen, Paopit Siriarchawatana, Somsak Likhitrattanapisal, Thanyakorn Nilsakha, Amonwan Chanpet, Sukanya Jeennor, Pattaraporn Yukphan, Supawadee Ingsriswang
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Thalassotalea aquiviva sp. nov., and Thalassotalea maritima sp. nov., Isolated from Seawater of the Coast in South Korea
    Jina Lee, Seung-Hui Song, Kira Moon, Nakyeong Lee, Sangdon Ryu, Hye Seon Song, Sung Moon Lee, Yun Ji Kim, Se Won Chun, Kyung-Min Choi, Aslan Hwanhwi Lee
    Journal of Microbiology.2024; 62(12): 1099.     CrossRef
  • Genome Sequencing Unveils Nomadic Traits of Lactiplantibacillus plantarum in Japanese Post-Fermented Tea
    Kyoka Sato, Yuichiro Ikagawa, Ryo Niwa, Hiroki Nishioka, Masanori Horie, Hitoshi Iwahashi
    Current Microbiology.2024;[Epub]     CrossRef
  • Effects of Limosilactobacillus reuteri strains PTA-126787 and PTA-126788 on intestinal barrier integrity and immune homeostasis in an alcohol-induced leaky gut model
    Dharanesh Gangaiah, Min Gu, Aline Zaparte, Olaf Will, Laurie C. Dolan, Anthony Goering, Jason Pillai, Shrinivasrao P. Mane, German Plata, Emily B. Helmes, David A. Welsh, Arvind Kumar Mahajan
    Scientific Reports.2024;[Epub]     CrossRef
  • Genome-guided isolation of the hyperthermophilic aerobe Fervidibacter sacchari reveals conserved polysaccharide metabolism in the Armatimonadota
    Nancy O. Nou, Jonathan K. Covington, Dengxun Lai, Xavier Mayali, Cale O. Seymour, Juliet Johnston, Jian-Yu Jiao, Steffen Buessecker, Damon Mosier, Alise R. Muok, Nicole Torosian, Allison M. Cook, Ariane Briegel, Tanja Woyke, Emiley Eloe-Fadrosh, Nicole Sh
    Nature Communications.2024;[Epub]     CrossRef
  • Isolation of Sphingopyxis kveilinensis sp. nov., a Potential Antibiotic-Degrading Bacterium, from a Karst Wetland
    Ying Chen, Jie Deng, Chengjian Yu
    Current Microbiology.2024;[Epub]     CrossRef
  • Transmission and Persistence of Infant Gut-Associated Bifidobacteria
    Margaret A. Hilliard, David A. Sela
    Microorganisms.2024; 12(5): 879.     CrossRef
  • The Type Strain of Bifidobacterium indicum Scardovi and Trovatelli 1969 (Approved Lists 1980) is ATCC 25912, not DSM 20214, and Rejection to Reclassify Bifidobacterium coryneforme as Bifidobacterium indicum
    Cheng-Shan Jiang, Chun Yan Li, Chun Tao Gu
    Current Microbiology.2024;[Epub]     CrossRef
  • Cultivation of deep-sea bacteria from the Northwest Pacific Ocean and characterization of Limnobacter profundi sp. nov., a phenol-degrading bacterium
    Mirae Kim, Jaeho Song, Seung Yeol Shin, Kazuhiro Kogure, Ilnam Kang, Jang-Cheon Cho
    Frontiers in Marine Science.2024;[Epub]     CrossRef
  • Faecalibacterium taiwanense sp. nov., isolated from human faeces
    Jong-Shian Liou, Wei-Ling Zhang, Li-Wen Hsu, Chih-Chieh Chen, Yu-Ting Wang, Koji Mori, Kohei Hidaka, Moriyuki Hamada, Lina Huang, Koichi Watanabe, Chien-Hsun Huang
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Mesorhizobium retamae sp. nov., a novel non-nodulating and non-nitrogen-fixing species isolated from the root nodules of Retama raetam sampled in Tunisia
    Roukaya Ben Gaied, Imed Sbissi, Mohamed Tarhouni, Katharina Huber, Jacqueline Wolf, Meina Neumann-Schaal, Imen Nouioui, Faten Ghodhbane-Gtari, Maher Gtari
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Genomic and phenotypic characterization of 26 novel marine bacterial strains with relevant biogeochemical roles and widespread presence across the global ocean
    Xavier Rey-Velasco, Teresa Lucena, Ana Belda, Josep M. Gasol, Olga Sánchez, David R. Arahal, María J. Pujalte
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • Lacticaseibacillus jixiensis sp. nov., Isolated from Traditional Chinese Pickle
    Si-Tong Song, Chun Yan Li, Chun Tao Gu
    Current Microbiology.2024;[Epub]     CrossRef
  • Paracoccus spongiarum sp. nov., isolated from the marine sponge, Phakellia elegans
    Soo-Bin Kim, Kyung Hyun Kim, Jin-Sook Park
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Saccharopolyspora mangrovi sp. nov., a novel mangrove soil actinobacterium with distinct metabolic potential revealed by comparative genomic analysis
    Yi-Ting Lu, Yi-Yi Wu, Ya-Nan Li, Wei-Yi Zheng, Wen-Zheng Liu
    Archives of Microbiology.2024;[Epub]     CrossRef
  • The Genome of a New Halorubrum distributum Strain ICIS4 Isolated from the Culture of a Microalga Dunaliella salina
    E. A. Selivanova, A. S. Balkin, Yu. A. Khlopko, V. Ya. Kataev, A. O. Plotnikov
    Microbiology.2024; 93(4): 482.     CrossRef
  • Luteibacter sahnii sp. nov., A Novel Yellow-Colored Xanthomonadin Pigment Producing Probiotic Bacterium from Healthy Rice Seed Microbiome
    Gagandeep Jaiswal, Rekha Rana, Praveen Kumar Nayak, Rekha Chouhan, Sumit G. Gandhi, Hitendra K. Patel, Prabhu B. Patil
    Current Microbiology.2024;[Epub]     CrossRef
  • Genomic analysis of the class Phycisphaerae reveals a versatile group of complex carbon-degrading bacteria
    Wouter B. Lenferink, Theo A. van Alen, Mike S. M. Jetten, Huub J. M. Op den Camp, Maartje A. H. J. van Kessel, Sebastian Lücker
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Analysis of Whole-Genome for Identification of Seven Penicillium Species with Significant Economic Value
    Yuanhao Huang, Lianguo Fu, Yutong Gan, Guihong Qi, Lijun Hao, Tianyi Xin, Wenjie Xu, Jingyuan Song
    International Journal of Molecular Sciences.2024; 25(15): 8172.     CrossRef
  • Jatrophihabitans cynanchi sp. nov., isolated from rhizosphere soil of Cynanchum wilfordii
    Min Kuk Suh, Ji-Sun Kim, Mi Kyung Eom, Han Sol Kim, Hyo Eun Do, Yong Kook Shin, Jung- Sook Lee
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Helicovermis profundi gen. nov., sp. nov., a novel mesophilic, asporogenous bacterium within the Clostridia isolated from a deep-sea hydrothermal vent chimney
    Urara Miyazaki, Daiki Mizutani, Yurina Hashimoto, Akihiro Tame, Shigeki Sawayama, Junichi Miyazaki, Ken Takai, Satoshi Nakagawa
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Patterns of Change in Nucleotide Diversity Over Gene Length
    Farhan Ali, Brian Golding
    Genome Biology and Evolution.2024;[Epub]     CrossRef
  • SeqCode facilitates naming of South African rhizobia left in limbo
    Melandré van Lill, Stephanus N. Venter, Esther K. Muema, Marike Palmer, Wai Y. Chan, Chrizelle W. Beukes, Emma T. Steenkamp
    Systematic and Applied Microbiology.2024; 47(2-3): 126504.     CrossRef
  • Bifidobacterium apicola sp. nov., isolated from the gut of honeybee (Apis mellifera)
    Ting-Yu Wang, Hao Wang, Chun Tao Gu
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Detecting horizontal gene transfer among microbiota: an innovative pipeline for identifying co-shared genes within the mobilome through advanced comparative analysis
    Jana Schwarzerova, Michal Zeman, Vladimir Babak, Katerina Jureckova, Marketa Nykrynova, Margaret Varga, Wolfram Weckwerth, Monika Dolejska, Valentine Provaznik, Ivan Rychlik, Darina Cejkova, Feng Gao, Johannes Wöstemeyer, Shay Tal, Alejandro Piña-Iturbe,
    Microbiology Spectrum.2024;[Epub]     CrossRef
  • Host genetic regulation of human gut microbial structural variation
    Daria V. Zhernakova, Daoming Wang, Lei Liu, Sergio Andreu-Sánchez, Yue Zhang, Angel J. Ruiz-Moreno, Haoran Peng, Niels Plomp, Ángela Del Castillo-Izquierdo, Ranko Gacesa, Esteban A. Lopera-Maya, Godfrey S. Temba, Vesla I. Kullaya, Sander S. van Leeuwen, R
    Nature.2024; 625(7996): 813.     CrossRef
  • Uncovering the lignin-degrading potential of Serratia quinivorans AORB19: insights from genomic analyses and alkaline lignin degradation
    Nadia Sufdar Ali, Subarna Thakur, Mengwei Ye, Fanny Monteil-Rivera, Youlian Pan, Wensheng Qin, Trent Chunzhong Yang
    BMC Microbiology.2024;[Epub]     CrossRef
  • Taxonomic note on Kocuria and Rothia: taxogenomic insights for addressing misidentifications and proposing new combinations and new subspecies
    Faten Ghodhbane-Gtari, Mohamed Aziz Haj Nasr, Rafik Gatri, Maher Gtari
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Chengkuizengella axinellae sp. nov., a symbiotic bacterium isolated from a marine sponge of the genus Axinella
    Yea-Lin Moon, Kyung Hyun Kim, Jin-Sook Park
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Adlercreutzia faecimuris sp. nov., producing propionate and acetate isolated from mouse feces
    Min Kuk Suh, Jong- Sik Jin, Hyo Eun Do, Ji-Sun Kim, Mi Kyung Eom, Han Sol Kim, Jung- Sook Lee
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Xanthomonas chitinilytica sp. nov., a novel chitinolytic bacterium isolated from a microbial fermentation bed material
    Xiaodong Liu, Xin Liu, Zhenshan Deng, Xiaolong He, Yingying Jiang
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Kribbella caucasensis sp. nov. from the Soil of the North Caucasus Mountains
    A. N. Avtukh, E. V. Ariskina, L. M. Baryshnikova, N. V. Prisyazhnaya, L. V. Dorofeeva, L. I. Evtushenko
    Microbiology.2024; 93(6): 730.     CrossRef
  • Peptostreptococcus equinus sp. nov., isolated from horse faeces
    Hye Su Jung, Jeong Ui Yun, Mi-Ja Jung, Hye Seon Song, Yeon Bee Kim, Yujin Kim, Min Ji Lee, Jisu Lee, Che Ok Jeon, Seong Woon Roh, Tae Woong Whon, Joon-Gyu Kim, Se Hee Lee
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Aurantiacibacter poecillastricola sp. nov., Isolated from the Marine Sponge, Poecillastra wondoensis, and Reclassification of Erythrobacter alti as Aurantiacibacter alti comb. nov.
    Soo-Bin Kim, Kyung Hyun Kim, Jin-Sook Park
    Journal of Microbiology and Biotechnology.2024;[Epub]     CrossRef
  • Philodulcilactobacillus myokoensis gen. nov., sp. nov., a fructophilic, acidophilic, and agar-phobic lactic acid bacterium isolated from fermented vegetable extracts
    Tomoaki Kouya, Yohei Ishiyama, Shota Ohashi, Ryota Kumakubo, Takeshi Yamazaki, Toshiki Otaki, Guadalupe Virginia Nevárez-Moorillón
    PLOS ONE.2023; 18(6): e0286677.     CrossRef
  • Comparative Genomic Analysis and BTEX Degradation Pathways of a Thermotolerant Cupriavidus cauae PHS1
    Chandran Sathesh-Prabu, Jihoon Woo, Yuchan Kim, Suk Min Kim, Sun Bok Lee, Che Ok Jeon, Donghyuk Kim, Sung Kuk Lee
    Journal of Microbiology and Biotechnology.2023; 33(7): 875.     CrossRef
  • Complete genome sequence of the emerging pathogen Cysteiniphilum spp. and comparative genomic analysis with genus Francisella : Insights into its genetic diversity and potential virulence traits
    Changrui Qian, Mengxin Xu, Zeyu Huang, Miran Tan, Cheng Fu, Tieli Zhou, Jianming Cao, Cui Zhou
    Virulence.2023;[Epub]     CrossRef
  • Psychroserpens ponticola sp. nov. and Marinomonas maritima sp. nov., isolated from seawater
    Sylvia Kristyanto, Jaejoon Jung, Jeong Min Kim, Byeong Jun Choi, Dong Min Han, Sung Chul Lee, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Atopomonas sediminilitoris sp. nov., isolated from beach sediment of Zhairuo Island, China
    Kejing Li, Zhenbo Ye, Gen Chen, Kaiwen Zheng, Jun Yin, Sanjit Chandra Debnath, Cen Yan, Yi Hong, Zhen Guo, Pinmei Wang, Fabai Wu, Daoqiong Zheng
    Antonie van Leeuwenhoek.2023; 116(2): 97.     CrossRef
  • Chryseobacterium paludis sp. nov. and Chryseobacterium foetidum sp. nov. Isolated from the Aquatic Environment, South Korea
    Miryung Kim, Yong-Seok Kim, Chang-Jun Cha
    Journal of Microbiology.2023; 61(1): 37.     CrossRef
  • Paenibacillus soyae sp. nov., isolated from the rhizosphere of soya bean
    Hui Zhao, Yue Su, Qihui Gu, Jumei Zhang, Xinqiang Xie, Qingping Wu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Geothrix oryzisoli sp. nov., a ferric iron-reducing bacterium isolated from paddy soil
    Shuang Han, Rong Tang, Shang Yang, Cheng-Jie Xie, Manik Prabhu Narsing Rao, Christopher Rensing, Guo-Hong Liu, Shun-Gui Zhou
    Antonie van Leeuwenhoek.2023; 116(5): 477.     CrossRef
  • Description of Luteibacter aegosomatis sp. nov., Luteibacter aegosomaticola sp. nov., and Luteibacter aegosomatissinici sp. nov. isolated from the Intestines of Aegosoma sinicum Larvae
    Hae-In Joe, Jee-Won Choi, June-Young Lee, Hojun Sung, Su-Won Jeong, Yun-Seok Jeong, Jae-Yun Lee, Jin-Woo Bae
    Journal of Microbiology.2023; 61(6): 603.     CrossRef
  • Hoeflea algicola sp. nov. and Hoeflea ulvae sp. nov., isolated from phycosphere of marine algae
    Ju Hye Baek, Sylvia Kristyanto, Jeong Min Kim, Dong Min Han, Zhe-Xue Quan, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Muricauda myxillae sp. nov., isolated from a marine sponge (Myxilla rosacea), and reclassification of Flagellimonas hymeniacidonis as Muricauda symbiotica nom. nov.
    Yea-Lin Moon, Kyung-Hyun Kim, Jin-Sook Park
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Description and Genomic Characteristics of Weissella fermenti sp. nov., Isolated from Kimchi
    Jae Kyeong Lee, Ju Hye Baek, Dong Min Han, Se Hee Lee, So Young Kim, Che Ok Jeon
    Journal of Microbiology and Biotechnology.2023; 33(11): 1448.     CrossRef
  • Dyadobacter pollutisoli sp. nov., isolated from plastic waste landfill soil
    Kyeong Ryeol Kim, Jeong Min Kim, Jae Kyeong Lee, Dong Min Han, Lujiang Hao, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • UFCG: database of universal fungal core genes and pipeline for genome-wide phylogenetic analysis of fungi
    Dongwook Kim, Cameron L M Gilchrist, Jongsik Chun, Martin Steinegger
    Nucleic Acids Research.2023; 51(D1): D777.     CrossRef
  • Ancient Rapid Radiation Explains Most Conflicts Among Gene Trees and Well-Supported Phylogenomic Trees of Nostocalean Cyanobacteria
    Carlos J Pardo-De la Hoz, Nicolas Magain, Bryan Piatkowski, Luc Cornet, Manuela Dal Forno, Ignazio Carbone, Jolanta Miadlikowska, François Lutzoni, Claudia Lemus-Solis
    Systematic Biology.2023; 72(3): 694.     CrossRef
  • Zwartia vadi sp. nov., a Novel Species of the GKS98 Cluster Isolated from a Stream, and the Reclassification of ‘Achromobacter Panacis’ as Zwartia panacis comb. nov
    Miri S. Park, Ilnam Kang, Jang-Cheon Cho
    Microorganisms.2023; 11(9): 2150.     CrossRef
  • Comparative genomics reveals environmental adaptability and antimicrobial activity of a novel Streptomyces isolated from soil under black Gobi rocks
    Ying Wen, Binglin Zhang, Gaosen Zhang, Minghui Wu, Ximing Chen, Tuo Chen, Guangxiu Liu, Wei Zhang
    Antonie van Leeuwenhoek.2023; 116(12): 1407.     CrossRef
  • Phylogenomic Insights on the Xanthomonas translucens Complex, and Development of a TaqMan Real-Time Assay for Specific Detection of pv. translucens on Barley
    James T. Tambong, Renlin Xu, Maria Constanza Fleitas, Lipu Wang, Keith Hubbard, Randy Kutcher
    Phytopathology®.2023; 113(11): 2091.     CrossRef
  • Microvirga terrae sp. nov., Isolated from Soil
    Kyung Hyun Kim, Ju Hye Baek, Sang Eun Jeong, Lujiang Hao, Che Ok Jeon
    Current Microbiology.2023;[Epub]     CrossRef
  • Incidence, genetic diversity, and antimicrobial resistance profiles of Vibrio parahaemolyticus in seafood in Bangkok and eastern Thailand
    Chartchai Changsen, Somsak Likhitrattanapisal, Kamonwan Lunha, Wiyada Chumpol, Surasak Jiemsup, Anuphap Prachumwat, Darin Kongkasuriyachai, Supawadee Ingsriswang, Soraya Chaturongakul, Aekarin Lamalee, Suganya Yongkiettrakul, Sureemas Buates
    PeerJ.2023; 11: e15283.     CrossRef
  • Streptomonospora mangrovi sp. nov., isolated from mangrove soil showing similar metabolic capabilities, but distinct secondary metabolites profiles
    Cheng Zhen, Xin-Kai Chen, Xian-Feng Ge, Wen-Zheng Liu
    Archives of Microbiology.2023;[Epub]     CrossRef
  • Alkalicoccobacillus porphyridii sp. nov., isolated from a marine red alga, reclassification of Shouchella plakortidis and Shouchella gibsonii as Alkalicoccobacillus plakortidis comb. nov. and Alkalicoccobacillus gibsonii comb. nov., and emend
    Kyung Hyun Kim, Dong Min Han, Jae Kyeong Lee, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • UACG: Up-to-Date Archaeal Core Genes and Software for Phylogenomic Tree Reconstruction
    Seong-In Na, Michael James Bailey, Mauricio Chalita, Jae Hyoung Cho, Jongsik Chun
    Journal of Microbiology.2023; 61(7): 683.     CrossRef
  • Alishewanella maricola sp. nov., isolated from seawater of the Yellow Sea
    Kyung Hyun Kim, Jeong Min Kim, Hyun Mi Jin, Lujiang Hao, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Cutibacterium equinum sp. nov., isolated from horse faeces
    Jeong Ui Yun, Hye Su Jung, Mi-Ja Jung, Hye Seon Song, Yeon Bee Kim, Yujin Kim, Joon-Gyu Kim, Seong Woon Roh, Se Hee Lee, Jun Sik Lee, Tae Woong Whon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Sugar Concentration, Nitrogen Availability, and Phylogenetic Factors Determine the Ability of Acinetobacter spp. and Rosenbergiella spp. to Grow in Floral Nectar
    José R. Morales-Poole, Clara de Vega, Kaoru Tsuji, Hans Jacquemyn, Robert R. Junker, Carlos M. Herrera, Chris Michiels, Bart Lievens, Sergio Álvarez-Pérez
    Microbial Ecology.2023; 86(1): 377.     CrossRef
  • Silvimonas soli sp. nov., a new member of Chromobacteriaceae isolated from soil in Norrbyskär island, Sweden
    Martina Jerabkova, Tereza Smrhova, Eglantina Lopez-Echartea, Jiri Dresler, Jachym Suman, Gabriela Kapinusova, Tomas Cajthaml, Zdena Skrob, Robin Kyclt, Jonas Fagerman, Michal Strejcek, Ondrej Uhlik
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Actinophytocola gossypii sp. nov. and Streptomyces gossypii sp. nov., two novel actinomycetes isolated from rhizosphere soil of cotton
    Xianfeng Ge, Shenrong Yang, Cheng Zhen, Wenzheng Liu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Phylogenomic analysis of the genus Rosenbergiella and description of Rosenbergiella gaditana sp. nov., Rosenbergiella metrosideri sp. nov., Rosenbergiella epipactidis subsp. epipactidis subsp. nov., Rosenbergiella epipactidis subsp. californiensis subsp.
    Sergio Álvarez-Pérez, Clara de Vega, Kristof Vanoirbeek, Kaoru Tsuji, Hans Jacquemyn, Tadashi Fukami, Chris Michiels, Bart Lievens
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Thermomonas mangrovi sp. nov., isolated from soil of a mangrove nature reserve
    Shanshan Xu, Junpeng Chen, Si Chen, Qiliang Lai, Zengzhi Liu, Ying Xu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Tahibacter soli sp. nov., isolated from soil and Tahibacter amnicola sp. nov., isolated from freshwater
    Ju Hye Baek, Dong Min Han, Jeong Min Kim, Baolei Jia, Ji Young Jung, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Phylogenomic reappraisal of the family Rhizobiaceae at the genus and species levels, including the description of Ectorhizobium quercum gen. nov., sp. nov.
    Tengfei Ma, Han Xue, Chungen Piao, Ning Jiang, Yong Li
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Antarcticirhabdus aurantiaca gen. nov., sp. nov., isolated from Antarctic gravel soil
    Jie Du, Ying Zhang, Di Xin, Yuhua Xin, Jianli Zhang
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Caldimonas mangrovi sp. nov., Isolated from Mangrove Soil
    S. R. Yang, Y. Y. Liu, X. F. Ge, W. Z. Liu
    Microbiology.2023; 92(4): 500.     CrossRef
  • Chitinophaga horti sp. nov., Isolated from Garden Soil
    Dong Min Han, Ju Hye Baek, Dae Gyu Choi, Myeong Seo Jin, Che Ok Jeon
    Current Microbiology.2023;[Epub]     CrossRef
  • Streptomyces pacificus sp. nov., a novel spongiicolazolicin-producing actinomycete isolated from a coastal sediment
    Miku Takahashi, Shoya Shinohara, Moriyuki Hamada, Tomohiko Tamura, Hideo Dohra, Shinya Kodani, Youji Nakagawa, Susumu Kokubo, Masayuki Hayakawa, Hideki Yamamura
    The Journal of Antibiotics.2023; 76(2): 93.     CrossRef
  • MALDI-TOF MS analysis of Burkholderia pseudomallei and closely related species isolated from soils and water in Khon Kaen, Thailand
    Nut Nithimongkolchai, Yothin Hinwan, Benjawan Kaewseekhao, Pisit Chareonsudjai, Pipat Reungsang, Ratthaphol Kraiklang, Sorujsiri Chareonsudjai, Lumyai Wonglakorn, Ploenchan Chetchotisakd, Auttawit Sirichoat, Arnone Nithichanon, Kiatichai Faksri
    Infection, Genetics and Evolution.2023; 116: 105532.     CrossRef
  • Flavobacterium psychrotrophum sp. nov. and Flavobacterium panacagri sp. nov., Isolated from Freshwater and Soil
    Yong-Seok Kim, Eun-Mi Hwang, Chang-Myeong Jeong, Chang-Jun Cha
    Journal of Microbiology.2023; 61(10): 891.     CrossRef
  • VBCG: 20 validated bacterial core genes for phylogenomic analysis with high fidelity and resolution
    Renmao Tian, Behzad Imanian
    Microbiome.2023;[Epub]     CrossRef
  • tilS and rpoB: New Molecular Markers for Phylogenetic and Biodiversity Studies of the Genus Thiothrix
    Nikolai V. Ravin, Dmitry D. Smolyakov, Nikita D. Markov, Alexey V. Beletsky, Andrey V. Mardanov, Tatyana S. Rudenko, Margarita Yu. Grabovich
    Microorganisms.2023; 11(10): 2521.     CrossRef
  • Thermomonas paludicola sp. nov., isolated from a lotus wetland
    Mirae Kim, Miri S. Park, Ilnam Kang, Jang-Cheon Cho
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Octadecabacter algicola sp. nov. and Octadecabacter dasysiphoniae sp. nov., isolated from a marine red alga and emended description of the genus Octadecabacter
    Myeong Seo Jin, Kyung Hyun Kim, Ju Hye Baek, Jeong Min Kim, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Flavihumibacter fluminis sp. nov. and Flavihumibacter rivuli sp. nov., isolated from a freshwater stream
    Miri S. Park, Hyeonuk Sa, Ilnam Kang, Jang-Cheon Cho
    Journal of Microbiology.2022; 60(8): 806.     CrossRef
  • Exploring the genome of Lactobacillaceae spp. Sy-1 isolated from Heterotrigona itama honey
    Syariffah Nuratiqah Syed Yaacob, Fahrul Huyop, Mailin Misson, Roswanira Abdul Wahab, Nurul Huda
    PeerJ.2022; 10: e13053.     CrossRef
  • Micrococcus porci sp. nov., Isolated from Feces of Black Pig (Sus scrofa)
    Ai-Yun Lee, Chia-Hsuan Chen, Jong-Shian Liou, Yu-Chun Lin, Moriyuki Hamada, Yu-Ting Wang, Lin-Liang Peng, Shen-Chang Chang, Chih-Chieh Chen, Chuen-Fu Lin, Lina Huang, Chien-Hsun Huang
    Life.2022; 12(11): 1749.     CrossRef
  • Pseudonocardia humida sp. nov., an Actinomycete Isolated from Mangrove Soil Showing Distinct Distribution Pattern of Biosynthetic Gene Clusters
    Zhen-Yu Zan, Xian-Feng Ge, Rui-Rui Huang, Wen-Zheng Liu
    Current Microbiology.2022;[Epub]     CrossRef
  • Occultella gossypii sp. nov., an alkali-resistant isolate from soil sampled in a cotton field
    Xianfeng Ge, Ruirui Huang, Wenzheng Liu
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Rhodococcus oxybenzonivorans sp. nov., a benzophenone-3-degrading bacterium, isolated from stream sediment
    Ju Hye Baek, Woonhee Baek, Sang Eun Jeong, Sung Chul Lee, Hyun Mi Jin, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology.2022;[Epub]     CrossRef
  • Pedobacter aquae sp. nov., a multi-drug resistant bacterium isolated from fresh water
    Le Tran Tien Chau, Yong-Seok Kim, Chang-Jun Cha
    Antonie van Leeuwenhoek.2022; 115(3): 445.     CrossRef
  • Amsterdam urban canals contain novel niches for methane‐cycling microorganisms
    Koen A. J. Pelsma, Michiel H. in 't Zandt, Huub J. M. Op den Camp, Mike S. M. Jetten, Joshua F. Dean, Cornelia U. Welte
    Environmental Microbiology.2022; 24(1): 82.     CrossRef
  • Roseovarius carneus sp. nov., a novel bacterium isolated from a coastal phytoplankton bloom in Xiamen
    Xueqiong Sun, Dan Lin, Yu Han, Jia Sun, Jianing Ye, Beihan Chen, Kai Tang
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Tenacibaculum aquimarinum sp. nov., isolated from a marine alga and seawater
    Sylvia Kristyanto, Kyeong Ryeol Kim, Jaejoon Jung, Hyung Min Kim, Keunpil Kim, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Rheinheimera maricola sp. nov., isolated from seawater of the Yellow Sea
    Kyung Hyun Kim, Ju Hye Baek, Ruan Wenting, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Apilactobacillus apisilvae sp. nov., Nicolia spurrieriana gen. nov. sp. nov., Bombilactobacillus folatiphilus sp. nov. and Bombilactobacillus thymidiniphilus sp. nov., four new lactic acid bacterial isolates from stingless bees Tetragonula ca
    Scott A. Oliphant, Nathan S. Watson-Haigh, Krista M. Sumby, Jennifer Gardner, Scott Groom, Vladimir Jiranek
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Description of Polaribacter batillariae sp. nov., Polaribacter cellanae sp. nov., and Polaribacter pectinis sp. nov., novel bacteria isolated from the gut of three types of South Korean shellfish
    Su-Won Jeong, Jeong Eun Han, June-Young Lee, Ji-Ho Yoo, Do-Yeon Kim, In Chul Jeong, Jee-Won Choi, Yun-Seok Jeong, Jae-Yun Lee, So-Yeon Lee, Euon Jung Tak, Hojun Sung, Hyun Sik Kim, Pil Soo Kim, Dong-Wook Hyun, Jin-Woo Bae
    Journal of Microbiology.2022; 60(6): 576.     CrossRef
  • Neokomagataea anthophila sp. nov., an osmotolerant acetic acid bacterium isolated in Thailand and emended description of the genus Neokomagataea
    Piyanat Charoenyingcharoen, Pattaraporn Yukphan, Sukunphat Malimas, Somsak Likhitrattanapisal, Somboon Tanasupawat, Yuzo Yamada
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Massilia soli sp. nov., isolated from soil
    Ju Hye Baek, Woonhee Baek, Wenting Ruan, Hye Su Jung, Sung Chul Lee, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Parasphingorhabdus cellanae sp. nov., isolated from the gut of a Korean limpet, Cellana toreuma
    Ji-Ho Yoo, Jeong Eun Han, June-Young Lee, Su-Won Jeong, Yun-Seok Jeong, Jae-Yun Lee, So-Yeon Lee, Hojun Sung, Euon Jung Tak, Hyun Sik Kim, Pil Soo Kim, Jee-Won Choi, Do-Yeon Kim, In Chul Jeong, Do-Hun Gim, Seo Min Kang, Jin-Woo Bae
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Actinotalea soli sp. nov., isolated from Kubuqi Desert soil
    Jie Du, Weiwei Ping, Ya Chen, Huancheng Pang, Pengze Bai, Siqi Cui, Jianli Zhang
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Arsenicicoccus cauae sp. nov., isolated from the blood of a pediatric gastroenteritis patient
    Oh Joo Kweon, Kyung Hyun Kim, Hyung Min Kim, Shehzad Abid Khan, Ji Hun Jeong, Yong Kwan Lim, Hye Ryoun Kim, Che Ok Jeon, Mi-Kyung Lee
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Ramlibacter terrae sp. nov. and Ramlibacter montanisoli sp. nov., Isolated from Soil
    Shehzad Abid Khan, Hyung Min Kim, Ju Hye Baek, Hye Su Jung, Che Ok Jeon
    Journal of Microbiology and Biotechnology.2021; 31(9): 1210.     CrossRef
  • Ramlibacter algicola sp. nov., isolated from a freshwater alga Cryptomonas obovoidea
    Hyung Min Kim, Dong Min Han, Byung Hee Chun, Hye Su Jung, Kyung Hyun Kim, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
Research Support, Non-U.S. Gov't
Bacterial Communities in the Initial Stage of Marine Biofilm Formation on Artificial Surfaces
Jin-Woo Lee , Ji-Hyun Nam , Yang-Hoon Kim , Kyu-Ho Lee , Dong-Hun Lee
J. Microbiol. 2008;46(2):174-182.   Published online June 11, 2008
DOI: https://doi.org/10.1007/s12275-008-0032-3
  • 439 View
  • 0 Download
  • 183 Crossref
AbstractAbstract PDF
Succession of bacterial communities during the first 36 h of biofilm formation in coastal water was investigated at 3~15 h intervals. Three kinds of surfaces (i.e., acryl, glass, and steel substratum) were submerged in situ at Sacheon harbor, Korea. Biofilms were harvested by scraping the surfaces, and the compositions of bacterial communities were analyzed by terminal restriction fragment length polymorphism (T-RFLP), and cloning and sequencing of 16S rRNA genes. While community structure based on T-RFLP analysis showed slight differences by substratum, dramatic changes were commonly observed for all substrata between 9 and 24 h. Identification of major populations by 16S rRNA gene sequences indicated that γ-Proteobacteria (Pseudomonas, Acinetobacter, Alteromonas, and uncultured γ-Proteobacteria) were predominant in the community during 0~9 h, while the ratio of α-Proteobacteria (Loktanella, Methylobacterium, Pelagibacter, and uncultured α-Proteobacteria) increased 2.6~4.8 folds during 24~36 h of the biofilm formation, emerging as the most predominant group. Previously, α-Proteobacteria were recognized as the pioneering organisms in marine biofilm formation. However, results of this study, which revealed the bacterial succession with finer temporal resolution, indicated some species of γ-Proteobacteria were more important as the pioneering population. Measures to control pioneering activities of these species can be useful in prevention of marine biofilm formation.

Citations

Citations to this article as recorded by  
  • Discovery of potentially degrading microflora of different types of plastics based on long-term in-situ incubation in the deep sea
    Renju Liu, Guangshan Wei, Yongpeng Yang, Jiannan Wang, Sufang Zhao, Benjuan Zhang, Xun Hao, Kaixin Liu, Zongze Shao
    Environmental Research.2025; 268: 120812.     CrossRef
  • Biochemical composition of biofilms and gastropod grazers; informing biological control efforts from a nutritional perspective
    Rebecca M. McMullin, Matthew R. Miller, Lauren M. Fletcher, Grant A. Hopkins
    New Zealand Journal of Marine and Freshwater Research.2025; 59(4): 886.     CrossRef
  • Characterization of microbial biofilms on marine plastics: community development and density implications for vertical transport dynamics
    Gregory M. Joern, Rut Pedrosa-Pàmies, Xiangtao Jiang, Zhanfei Liu, Alexander B. Bochdansky
    Frontiers in Marine Science.2025;[Epub]     CrossRef
  • Invasion and ecological impact of the biofouling tube worm Hydroides elegans (Polychaeta: Serpulidae) in Korean coastal waters
    Sang Lyeol Kim, Ok Hwan Yu
    Frontiers in Marine Science.2025;[Epub]     CrossRef
  • Comparison of freshwater microbial communities in water and microplastics surfaces: insights from Dongting Lake, China
    Yiming Qiu, Xiaofeng Wen, Ziyi Xiang, Zixiang Chen, Ziyi Qiu, Meinan Peng, Shihan Zhong, Jiali Huang, Weicheng Zhou, Lingshi Yin
    Journal of Oceanology and Limnology.2025; 43(2): 545.     CrossRef
  • Unraveling the mysteries of the plastisphere: a comprehensive analysis of its composition, toxicity, and ecological impact
    Malika Moncer, Asma Hamza, Lamia Trabelsi
    Journal of Sedimentary Environments.2025; 10(2): 303.     CrossRef
  • Temporal and Depth‐Driven Variability of Pelagic Bacterial Communities in Lake Erie: Biofilm and Plankton Dynamics
    Rylie L. Robinson, Aaron T. Fisk, Sophie Crevecoeur
    Environmental Microbiology Reports.2025;[Epub]     CrossRef
  • Evaluation of multifunctional marine coatings enriched with organometallic biocides supported on ZSM-5 zeolite for biofouling prevention
    L.F. Montoya, I. Muñoz -Rivera, A.F. Jaramillo, N.J. Abreu, G. Sánchez-Sanhueza, G. González-Rocha, K. Fernández, M.F. Melendrez
    Materials Chemistry and Physics.2025; 329: 130056.     CrossRef
  • A Short Review of Strategies for Augmenting Organism Recruitment on Coastal Defense Structures
    Almog Ben-Natan, Nadav Shashar
    Journal of Marine Science and Engineering.2025; 13(1): 95.     CrossRef
  • Multifactored accelerated marine corrosion of immersed steels influenced by washed ashore Sargassum rafts
    Diana Bénuffé, Fatima Radouani, Maxence Quemener, Olivia Ozier, Marilyne Fauchon, Yannick Toueix, Fabienne Faӱ, Anthony Magueresse, Benoit Lescop, Stéphane Rioual, Pascal Zongo, Christophe Roos, Claire Hellio, Paule Salvin
    Marine Environmental Research.2025; 204: 106924.     CrossRef
  • Unveiling microbial succession dynamics on different plastic surfaces using WGCNA
    Keren Davidov, Sheli Itzahri, Liat Anabel Sinberger, Matan Oren, Arga Chandrashekar Anil
    PLOS ONE.2025; 20(2): e0318843.     CrossRef
  • Linking plastic degradation potential and resistance gene abundance in bacterioplankton community of the Sundarbans estuarine ecosystem
    Nirupama Saini, Anwesha Ghosh, Punyasloke Bhadury
    FEMS Microbiology Letters.2025;[Epub]     CrossRef
  • Polymers and immersion time shape bacterial pathogen and antibiotic resistance profiles in aquaculture facilities
    Jeanne Naudet, Jean-Christophe Auguet, Thierry Bouvier, Raherimino Rakotovao, Tony Motte, Loïc Gaumez, Tania Crucitti, Fabien Rieuvilleneuve, Emmanuelle Roque d’Orbcastel
    FEMS Microbiology Ecology.2025;[Epub]     CrossRef
  • Study of microbial community composition and corrosion in shale gas flowback water
    Yanran Wang, Shaomu Wen, Huali Yu, Yongfan Tang, Hongbing Huang, Xiaoxiong Guo
    Journal of Petroleum Exploration and Production Technology.2025;[Epub]     CrossRef
  • Weak effects of conventional and biodegradable microplastics on marine microbial communities
    Ulises Lora, Luca Schenone, Irene Forn, Francesc Peters, Jonna Piiparinen, Hermanni Kaartokallio, Maiju Lehtiniemi, Maria Montserrat Sala
    Frontiers in Marine Science.2024;[Epub]     CrossRef
  • High-throughput absolute quantification sequencing reveals the adaptive succession and assembly pattern of plastisphere communities in municipal sewer systems: Influence of environmental factors and microplastic polymer types
    Jianfeng Ye, Yi Zhu, Hao Chen, Xin Zhao, Jianfei Tang, Jinxu Zhang, Yu Chen, Yali Guo, Yaqin Tan, Ting Zhang
    Environmental Pollution.2024; 342: 123136.     CrossRef
  • Bacterial diversity in the biofilms on mariculture polystyrene foam at Xiamen’s coast
    Benjuan Zhang, Renju Liu, Haiming Xu, Sufang Zhao, Jiannan Wang, Zongze Shao
    Frontiers in Marine Science.2024;[Epub]     CrossRef
  • Bacterial biofilm from the central Moroccan Atlantic coast: genetic identification and antibiotic and heavy metal resistance profile
    N. El-Ouahmani, F. El-Ghazouani, B. Yacoubi, A. Zekhnini
    International Journal of Environmental Science and Technology.2024; 21(2): 1937.     CrossRef
  • Biodegradation behavior of polyesters with various internal chemical structures and external environmental factors in real seawater
    Mira Shin, Hyeri Kim, Soyoun Kim, Hyo Jeong Kim, Dongyeop X. Oh, Jeyoung Park
    Polymer Testing.2024; 132: 108357.     CrossRef
  • Land use, stratified wastewater and sediment, and microplastic attribute factors jointly influence the microplastic prevalence and bacterial colonization patterns in sewer habitats
    Jianfeng Ye, Yi Zhu, Hao Chen, Jianfei Tang, Xin Zhao, Xiaonan Sun, Jinxu Zhang, Yu Chen, Yali Guo, Ning Fang, Yaqin Tan, Ting Zhang
    Science of The Total Environment.2024; 918: 170653.     CrossRef
  • Polyethylene terephthalate (PET)-degrading bacteria in the pelagic deep-sea sediments of the Pacific Ocean
    Renju Liu, Haiming Xu, Sufang Zhao, Chunming Dong, Jianyang Li, Guangshan Wei, Guangyu Li, Linfeng Gong, Peisheng Yan, Zongze Shao
    Environmental Pollution.2024; 352: 124131.     CrossRef
  • Selection for antimicrobial resistance in the plastisphere
    Emily M. Stevenson, Angus Buckling, Matthew Cole, Penelope K. Lindeque, Aimee K. Murray
    Science of The Total Environment.2024; 908: 168234.     CrossRef
  • Rock Surface Colonization by Groundwater Microorganisms in an Aquifer System in Quebec, Canada
    Divya Patel, Vincent Blouin, Jamie Kirkpatrick, Cassandre Sara Lazar
    Diversity.2024; 16(7): 374.     CrossRef
  • Biodegradable plastics in Mediterranean coastal environments feature contrasting microbial succession
    Fons A. de Vogel, Maaike Goudriaan, Erik R. Zettler, Helge Niemann, Andreas Eich, Miriam Weber, Christian Lott, Linda A. Amaral-Zettler
    Science of The Total Environment.2024; 928: 172288.     CrossRef
  • Exploring changes in microplastic-associated bacterial communities with time, location, and polymer type in Liusha Bay, China
    Ting Wang, Fenglan Lu, Chuangye Yang, Cheng Wang, Yongshan Liao, Robert Mkuye, Yuewen Deng
    Marine Environmental Research.2024; 198: 106525.     CrossRef
  • Community structure and carbon metabolism functions of bacterioplankton in the Guangdong coastal zone
    Ziqi Peng, Pandeng Wang, Xiaoqing Luo, Qiqi Deng, Ziwen Yang, Jiaxue Wu, Wendong Xian, Weicong Yan, Xiaozhen Mou, Yang Yuan, Wenjun Li, Jialing Li
    Marine Life Science & Technology.2024; 6(3): 547.     CrossRef
  • Microbial community structure and co-occurrence network stability in seawater and microplastic biofilms under prometryn pollution in marine ecosystems
    Mengyao Yang, Lingchao Zhao, Xiaowen Yu, Wangxinze Shu, Furong Cao, Qian Liu, Mingjian Liu, Jun Wang, Yong Jiang
    Marine Pollution Bulletin.2024; 199: 115960.     CrossRef
  • A Bibliographic Exploration of Bacterial Houses: Biofilm Matrix Research and Future Frontiers
    Yuanzhao Ding
    Bacteria.2024; 3(3): 183.     CrossRef
  • Biofilm colonization and succession in a full-scale partial nitritation-anammox moving bed biofilm reactor
    Carolina Suarez, Tage Rosenqvist, Ivelina Dimitrova, Christopher J. Sedlacek, Oskar Modin, Catherine J. Paul, Malte Hermansson, Frank Persson
    Microbiome.2024;[Epub]     CrossRef
  • Microbial colonization and degradation of marine microplastics in the plastisphere: A review
    Xinyi Zhai, Xiao-Hua Zhang, Min Yu
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Mechanistic Insight into the Inhibitory Activity of Elasnin-Based Coating against Early Marine Biofilms
    Lexin Long, Yao Xiao, Jordy Evan Sulaiman, Fuqing Luo, Jian-Wei Tang, Yuqing Huang, Chuanhai Wu, Long Wu, Waichuen Wong, Feng Chen, Henry Lam, Pei-Yuan Qian
    Environmental Science & Technology.2023; 57(26): 9515.     CrossRef
  • Tracking the Evolution of Microbial Communities on Microplastics through a Wastewater Treatment Process: Insight into the “Plastisphere”
    Jin-Kyung Hong, Hyecheol Oh, Tae Kwon Lee, Seogku Kim, Daemin Oh, Jaehwan Ahn, Saerom Park
    Water.2023; 15(21): 3746.     CrossRef
  • How changing environments alter the microbial composition and ecological response in marine biofilms: a mini review
    Adamu Yunusa Ugya
    Egyptian Journal of Basic and Applied Sciences.2023; 10(1): 95.     CrossRef
  • Impacts of Biofilm Formation on the Physicochemical Properties and Toxicity of Microplastics: A Concise Review
    Joshua Moyal, Preeti H. Dave, Mengjie Wu, Shooka Karimpour, Satinder K. Brar, Huan Zhong, Raymond W. M. Kwong
    Reviews of Environmental Contamination and Toxicology.2023;[Epub]     CrossRef
  • Microbial colonization of microplastics in wastewater accelerates the aging process associated with oxidative stress and the insulin/IGF1 signaling pathway
    Haibo Chen, Mengfan Chen, Yulun Gu, Yongqi Jiang, Ping Ding, Chen Wang, Ruolin Pan, Chongli Shi, Hui Li
    Environmental Pollution.2023; 332: 121954.     CrossRef
  • The effect of polyvinyl chloride (PVC) color on biofilm development and biofilm-heavy metal chemodynamics in the aquatic environment
    Shuang Hu, David M. Johnson, Menghan Jiang, Junjie Zhang, Yingping Huang, Ying Xi, Tao Xu
    Science of The Total Environment.2023; 905: 166924.     CrossRef
  • When material science meets microbial ecology: Bacterial community selection on stainless steels in natural seawater
    Leslie K. Daille, Javiera Aguirre, Javiera Anguita, Carlos Galarce, Luis Caro-Lara, Francisco Armijo, Ignacio T. Vargas, Gonzalo Pizarro, Magdalena Walczak, Rodrigo De la Iglesia
    Colloids and Surfaces B: Biointerfaces.2023; 221: 112955.     CrossRef
  • Substrate Specificity of Biofilms Proximate to Historic Shipwrecks
    Rachel L. Mugge, Rachel D. Moseley, Leila J. Hamdan
    Microorganisms.2023; 11(10): 2416.     CrossRef
  • Polyethylene mulching film degrading bacteria within the plastisphere: Co-culture of plastic degrading strains screened by bacterial community succession
    Peiyuan Wang, Jiaxi Liu, Siqi Han, Yufan Wang, Yifan Duan, Tingting Liu, Lijun Hou, Zengqiang Zhang, Li Li, Yanbing Lin
    Journal of Hazardous Materials.2023; 442: 130045.     CrossRef
  • Metagenomic insights into the potential risks of representative bio/non-degradable plastic and non-plastic debris in the upper and lower reaches of Haihe Estuary, China
    Xinhai Zhao, Zhiguang Niu, Yongzheng Ma, Ying Zhang, Yuna Li
    Science of The Total Environment.2023; 887: 164026.     CrossRef
  • The role of microbe-microplastic associations in marine Nematode feeding behaviors
    Aaron Ridall, Sean Asgari, Jeroen Ingels
    Environmental Pollution.2023; 335: 122308.     CrossRef
  • Extreme weather events as an important factor for the evolution of plastisphere but not for the degradation process
    Katerina Karkanorachaki, Evdokia Syranidou, Nicolas Kalogerakis
    Water Research.2023; 246: 120687.     CrossRef
  • Research progress on the role of biofilm in heavy metals adsorption-desorption characteristics of microplastics: A review
    Haixia Pan, Xin Zhao, Xiuyan Zhou, Hua Yan, Xiaoyu Han, Mingsong Wu, Fang Chen
    Environmental Pollution.2023; 336: 122448.     CrossRef
  • Plastics select for distinct early colonizing microbial populations with reproducible traits across environmental gradients
    Ryan P. Bos, Drishti Kaul, Erik R. Zettler, Jeffrey M. Hoffman, Christopher L. Dupont, Linda A. Amaral‐Zettler, Tracy J. Mincer
    Environmental Microbiology.2023; 25(12): 2761.     CrossRef
  • Interactions between microplastics and contaminants: A review focusing on the effect of aging process
    Hongwei Luo, Chaolin Tu, Dongqin He, Anping Zhang, Jianqiang Sun, Jun Li, Juan Xu, Xiangliang Pan
    Science of The Total Environment.2023; 899: 165615.     CrossRef
  • Global Changes Alter the Successions of Early Colonizers of Benthic Surfaces
    Emanuele Somma, Antonio Terlizzi, Maria Costantini, Madalena Madeira, Valerio Zupo
    Journal of Marine Science and Engineering.2023; 11(6): 1232.     CrossRef
  • Microbiological Characterization of the Biofilms Colonizing Bioplastics in Natural Marine Conditions: A Comparison between PHBV and PLA
    Anna Marín, Patricia Feijoo, Rosa de Llanos, Belén Carbonetto, Pedro González-Torres, José Tena-Medialdea, José R. García-March, José Gámez-Pérez, Luis Cabedo
    Microorganisms.2023; 11(6): 1461.     CrossRef
  • Exploring microbial degradation of polyamide 4 in soils: Unveiling degradation mechanisms, pathways, and the contribution of strain NR4
    Li Wang, Ziwei Zhang, Di Zhang, Yongjun Qiu, Yibing Wang, Shu Quan, Liming Zhao
    Journal of Cleaner Production.2023; 429: 139535.     CrossRef
  • Microplastics and microorganisms in sediments from stormwater drain system
    Yudong Chen, Siping Niu, Jianghua Yu, Jing Wu, Tiantian Wang
    Science of The Total Environment.2023; 889: 164284.     CrossRef
  • Recent advances in the omics-based assessment of microbial consortia in the plastisphere environment: Deciphering the dynamic role of hidden players
    Naveen Malik, Sudarshan Singh Lakhawat, Vikram Kumar, Vinay Sharma, Jasvinder Singh Bhatti, Pushpender Kumar Sharma
    Process Safety and Environmental Protection.2023; 176: 207.     CrossRef
  • Microplastic biofilm, associated pathogen and antimicrobial resistance dynamics through a wastewater treatment process incorporating a constructed wetland
    Franciszek Bydalek, Gordon Webster, Ruth Barden, Andrew J. Weightman, Barbara Kasprzyk-Hordern, Jannis Wenk
    Water Research.2023; 235: 119936.     CrossRef
  • Molecular Identification of Biofilm-Forming Marine Bacterial Strains Isolated from Different Substrates of Mangrove Habitat
    Zahra Zarei Jeliani, Iman Sourinejad, Mahboobeh Afrand, Adnan Shahdadi, Morteza Yousefzadi
    Iranian Journal of Science and Technology, Transactions A: Science.2022; 46(6): 1563.     CrossRef
  • Colonization characteristics of pioneer surface-associated eukaryotes during natural biofilm formation on PDMS-based composites via 18S rRNA gene sequencing methods
    Yuan Sun, Yanhe Lang, Yusheng Pan, Qi Nie, Zheng Qi, Na Ling, Ke Han, Jinwei Zhang, Lei Wang, Cunguo Lin, Zhizhou Zhang
    International Biodeterioration & Biodegradation.2022; 166: 105341.     CrossRef
  • Eco-Plastics in the Sea: Succession of Micro- and Macro-Fouling on a Biodegradable Polymer Augmented With Oyster Shell
    François Audrézet, Xavier Pochon, Oliver Floerl, Marie-Joo Le Guen, Branwen Trochel, Victor Gambarini, Gavin Lear, Anastasija Zaiko
    Frontiers in Marine Science.2022;[Epub]     CrossRef
  • Metagenomic analysis of pioneer biofilm-forming marine bacteria with emphasis on Vibrio gigantis adhesion dynamics
    Luka Gujinović, Ana Maravić, Hrvoje Kalinić, Mia Dželalija, Stefanija Šestanović, Dražen Zanchi, Ivica Šamanić
    Colloids and Surfaces B: Biointerfaces.2022; 217: 112619.     CrossRef
  • Role of microbiome and biofilm in environmental plastic degradation
    Indranil Chattopadhyay
    Biocatalysis and Agricultural Biotechnology.2022; 39: 102263.     CrossRef
  • A critical review of marine biofilms on metallic materials
    B. Tuck, E. Watkin, A. Somers, L. L. Machuca
    npj Materials Degradation.2022;[Epub]     CrossRef
  • Marine Bacteria Associated with Colonization and Alteration of Plastic Polymers
    Marina Carrasco-Acosta, Marta Santos-Garcia, Pilar Garcia-Jimenez
    Applied Sciences.2022; 12(21): 11093.     CrossRef
  • Structure and activity of marine bacterial communities responding to plastic leachates
    Stéphanie Birnstiel, Marta Sebastián, Cristina Romera-Castillo
    Science of The Total Environment.2022; 834: 155264.     CrossRef
  • Microbial Interactions with Particulate and Floating Pollutants in the Oceans: A Review
    Estefan Monteiro da Fonseca, Christine Gaylarde, José Antônio Baptista Neto, Juan Carlos Camacho Chab, Otto Ortega-Morales
    Micro.2022; 2(2): 257.     CrossRef
  • Biofilm on microplastics in aqueous environment: Physicochemical properties and environmental implications
    Siying He, Meiying Jia, Yinping Xiang, Biao Song, Weiping Xiong, Jiao Cao, Haihao Peng, Yang Yang, Wenjun Wang, Zhaohui Yang, Guangming Zeng
    Journal of Hazardous Materials.2022; 424: 127286.     CrossRef
  • Microbial community niches on microplastics and prioritized environmental factors under various urban riverine conditions
    Hien Thi Nguyen, Woodan Choi, Eun-Ju Kim, Kyungjin Cho
    Science of The Total Environment.2022; 849: 157781.     CrossRef
  • Seawater copper content controls biofilm bioaccumulation and microbial community on microplastics
    Kahina Djaoudi, Javier Angel. Tesán Onrubia, Amine Boukra, Lucas Guesnay, Aurélie Portas, Raphaëlle Barry-Martinet, Bernard Angeletti, Stéphane Mounier, Véronique Lenoble, Jean-François Briand
    Science of The Total Environment.2022; 814: 152278.     CrossRef
  • Does bacterial community succession within the polyethylene mulching film plastisphere drive biodegradation?
    Peiyuan Wang, Tianjiao Song, Jingshu Bu, Yiqiong Zhang, Jiaxi Liu, Jianbo Zhao, Tingkai Zhang, Jiao Xi, Jing Xu, Li Li, Yanbing Lin
    Science of The Total Environment.2022; 824: 153884.     CrossRef
  • An appraisal of early stage biofilm-forming bacterial community assemblage and diversity in the Arabian Sea, India
    Madhav Kumar, Raghawendra Kumar, Doongar R. Chaudhary, Bhavanath Jha
    Marine Pollution Bulletin.2022; 180: 113732.     CrossRef
  • Quantifying the importance of plastic pollution for the dissemination of human pathogens: The challenges of choosing an appropriate ‘control’ material
    Rebecca Metcalf, David M. Oliver, Vanessa Moresco, Richard S. Quilliam
    Science of The Total Environment.2022; 810: 152292.     CrossRef
  • Marine biofilms: diversity, interactions and biofouling
    Pei-Yuan Qian, Aifang Cheng, Ruojun Wang, Rui Zhang
    Nature Reviews Microbiology.2022; 20(11): 671.     CrossRef
  • Microplastics as an aquatic pollutant affect gut microbiota within aquatic animals
    Weixin Li, Xiaofeng Chen, Minqian Li, Zeming Cai, Han Gong, Muting Yan
    Journal of Hazardous Materials.2022; 423: 127094.     CrossRef
  • Impacts of UV-C Irradiation on Marine Biofilm Community Succession
    Abhishek Naik, Mark Smithers, Pia H. Moisander, Knut Rudi
    Applied and Environmental Microbiology.2022;[Epub]     CrossRef
  • Diversity of Free-Living and Particle-Attached Prokaryotes in a River-Influenced Coastal Area of the Northern Adriatic Sea
    Anna Chiara Trano, Roberta Piredda, Cecilia Balestra, Mauro Bastianini, Josep M. Gasol, Raffaella Casotti
    Frontiers in Marine Science.2022;[Epub]     CrossRef
  • Plastic microbiome development in a freshwater ecosystem
    Adit Chaudhary, Samuel T. Dunn, John Kelly, Timothy J. Hoellein
    Science of The Total Environment.2022; 848: 157697.     CrossRef
  • Microbial pioneers of plastic colonisation in coastal seawaters
    Mira Latva, Craig J. Dedman, Robyn J. Wright, Marco Polin, Joseph A. Christie-Oleza
    Marine Pollution Bulletin.2022; 179: 113701.     CrossRef
  • Surface Characteristics Together With Environmental Conditions Shape Marine Biofilm Dynamics in Coastal NW Mediterranean Locations
    Jean-François Briand, Thomas Pollet, Benjamin Misson, Cédric Garnier, Marlène Lejars, Marine Maintenay, Raphaëlle Barry-Martinet, Aurélie Portas, Jean-François Ghiglione, Christine Bressy
    Frontiers in Marine Science.2022;[Epub]     CrossRef
  • The impact of microplastic-microbe interactions on animal health and biogeochemical cycles: A mini-review
    Jiao Wang, Chu Peng, Hongyu Li, Pingping Zhang, Xianhua Liu
    Science of The Total Environment.2021; 773: 145697.     CrossRef
  • Bacterial and fungal assemblages and functions associated with biofilms differ between diverse types of plastic debris in a freshwater system
    Longfei Wang, Jiaxin Tong, Yi Li, Jinxin Zhu, Wenlong Zhang, Lihua Niu, Huanjun Zhang
    Environmental Research.2021; 196: 110371.     CrossRef
  • Biofilm-Developed Microplastics As Vectors of Pollutants in Aquatic Environments
    Jianlong Wang, Xuan Guo, Jianming Xue
    Environmental Science & Technology.2021;[Epub]     CrossRef
  • Exploring benthic cyanobacterial diversity and co-occurring potentially harmful dinoflagellates in six islands of the South Pacific
    Laura Biessy, Susanna A. Wood, Mireille Chinain, Mélanie Roué, Kirsty F. Smith
    Hydrobiologia.2021; 848(11): 2815.     CrossRef
  • On Caretta caretta’s shell: first spatial analysis of micro- and macro-epibionts on the Mediterranean loggerhead sea turtle carapace
    Monica Francesca Blasi, Alice Rotini, Tiziano Bacci, Monica Targusi, Giusy Bonanno Ferraro, Luca Vecchioni, Rosa Alduina, Luciana Migliore
    Marine Biology Research.2021; 17(7-8): 762.     CrossRef
  • Periodic chemical cleaning with urea: disintegration of biofilms and reduction of key biofilm-forming bacteria from reverse osmosis membranes
    H. Sanawar, L.H. Kim, N.M. Farhat, M.C.M. van Loosdrecht, J.S. Vrouwenvelder
    Water Research X.2021; 13: 100117.     CrossRef
  • The ecological impacts of multiple environmental stressors on coastal biofilm bacteria
    Robert M. W. Ferguson, Eoin J. O’Gorman, David J. McElroy, Boyd A. McKew, Ross A. Coleman, Mark C. Emmerson, Alex J. Dumbrell
    Global Change Biology.2021; 27(13): 3166.     CrossRef
  • Microbial community development on model particles in the deep sulfidic waters of the Black Sea
    Saara Suominen, Karlijn Doorenspleet, Jaap S. Sinninghe Damsté, Laura Villanueva
    Environmental Microbiology.2021; 23(6): 2729.     CrossRef
  • In Situ Investigation of Plastic-Associated Bacterial Communities in a Freshwater Lake of Hungary
    István Szabó, Jafar Al-Omari, Gábor Soma Szerdahelyi, Milán Farkas, Yazid Al-Omari, Péter Márton Szabó, Rózsa Sebők, Jeffrey Griffitts, Balázs Kriszt, Sándor Szoboszlay
    Water, Air, & Soil Pollution.2021;[Epub]     CrossRef
  • Bacterial community structure of early-stage biofilms is dictated by temporal succession rather than substrate types in the southern coastal seawater of India
    T. J. Sushmitha, Meora Rajeev, P. Sriyutha Murthy, S. Ganesh, Subba Rao Toleti, Shunmugiah Karutha Pandian, Tzen-Yuh Chiang
    PLOS ONE.2021; 16(9): e0257961.     CrossRef
  • Deep-sea plastisphere: Long-term colonization by plastic-associated bacterial and archaeal communities in the Southwest Atlantic Ocean
    Luana Agostini, Julio Cezar Fornazier Moreira, Amanda Gonçalves Bendia, Maria Carolina Pezzo Kmit, Linda Gwen Waters, Marina Ferreira Mourão Santana, Paulo Yukio Gomes Sumida, Alexander Turra, Vivian Helena Pellizari
    Science of The Total Environment.2021; 793: 148335.     CrossRef
  • Microbial Life on the Surface of Microplastics in Natural Waters
    Olena Stabnikova, Viktor Stabnikov, Andriy Marinin, Maris Klavins, Linards Klavins, Ashok Vaseashta
    Applied Sciences.2021; 11(24): 11692.     CrossRef
  • Bacterial Abundance, Diversity and Activity During Long-Term Colonization of Non-biodegradable and Biodegradable Plastics in Seawater
    Charlene Odobel, Claire Dussud, Lena Philip, Gabrielle Derippe, Marion Lauters, Boris Eyheraguibel, Gaëtan Burgaud, Alexandra Ter Halle, Anne-Leila Meistertzheim, Stephane Bruzaud, Valerie Barbe, Jean-Francois Ghiglione
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Early succession of bacterial communities associated as biofilm-like structures in the rhizosphere of alfalfa
    Fiorela Nievas, Emiliano Primo, Emiliano Foresto, Sacha Cossovich, Walter Giordano, Pablo Bogino
    Applied Soil Ecology.2021; 157: 103755.     CrossRef
  • Biofilm formation and its influences on the properties of microplastics as affected by exposure time and depth in the seawater
    Chen Tu, Tao Chen, Qian Zhou, Ying Liu, Jing Wei, Joanna J. Waniek, Yongming Luo
    Science of The Total Environment.2020; 734: 139237.     CrossRef
  • Metagenomic Exploration of Plastic Degrading Microbes for Biotechnological Application
    Jyotika Purohit, Anirudha Chattopadhyay, Basavaraj Teli
    Current Genomics.2020; 21(4): 253.     CrossRef
  • Synergistic biodegradation of aromatic-aliphatic copolyester plastic by a marine microbial consortium
    Ingrid E. Meyer-Cifuentes, Johannes Werner, Nico Jehmlich, Sabine E. Will, Meina Neumann-Schaal, Başak Öztürk
    Nature Communications.2020;[Epub]     CrossRef
  • Community structure and functional diversity of the plastisphere in aquaculture waters: Does plastic color matter?
    Bin Wen, Jun-Heng Liu, Yuan Zhang, Hao-Ran Zhang, Jian-Zhong Gao, Zai-Zhong Chen
    Science of The Total Environment.2020; 740: 140082.     CrossRef
  • Are bacterial communities associated with microplastics influenced by marine habitats?
    Jingjing Li, Wei Huang, Rijin Jiang, Xibin Han, Dongdong Zhang, Chunfang Zhang
    Science of The Total Environment.2020; 733: 139400.     CrossRef
  • Microplastics provide new microbial niches in aquatic environments
    Yuyi Yang, Wenzhi Liu, Zulin Zhang, Hans-Peter Grossart, Geoffrey Michael Gadd
    Applied Microbiology and Biotechnology.2020; 104(15): 6501.     CrossRef
  • High-throughput sequencing analysis of marine pioneer surface-biofilm bacteria communities on different PDMS-based coatings
    Yuan Sun, Yanhe Lang, ZhengYu Yan, Lei Wang, Zhizhou Zhang
    Colloids and Surfaces B: Biointerfaces.2020; 185: 110538.     CrossRef
  • Soil Pollution from Micro- and Nanoplastic Debris: A Hidden and Unknown Biohazard
    Shamina Imran Pathan, Paola Arfaioli, Tommaso Bardelli, Maria Teresa Ceccherini, Paolo Nannipieri, Giacomo Pietramellara
    Sustainability.2020; 12(18): 7255.     CrossRef
  • Impacts of microplastics exposure on mussel (Mytilus edulis) gut microbiota
    Luen-Luen Li, Rachid Amara, Sami Souissi, Alexandre Dehaut, Guillaume Duflos, Sébastien Monchy
    Science of The Total Environment.2020; 745: 141018.     CrossRef
  • Non-toxic antifouling potential of Caatinga plant extracts: effective inhibition of marine initial biofouling
    Vanessa Ochi Agostini, Alexandre José Macedo, Erik Muxagata, Márcia Vanusa da Silva, Grasiela Lopes Leães Pinho
    Hydrobiologia.2020; 847(1): 45.     CrossRef
  • Distinct Temporal Succession of Bacterial Communities in Early Marine Biofilms in a Portuguese Atlantic Port
    Jorge T. Antunes, António G. G. Sousa, Joana Azevedo, Adriana Rego, Pedro N. Leão, Vitor Vasconcelos
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Major Role of Surrounding Environment in Shaping Biofilm Community Composition on Marine Plastic Debris
    Marco Basili, Grazia Marina Quero, Donato Giovannelli, Elena Manini, Carla Vignaroli, Carlo Giacomo Avio, Rocco De Marco, Gian Marco Luna
    Frontiers in Marine Science.2020;[Epub]     CrossRef
  • Monitoring of biofouling communities in a Portuguese port using a combined morphological and metabarcoding approach
    Joana Azevedo, Jorge T. Antunes, André M. Machado, Vitor Vasconcelos, Pedro N. Leão, Elsa Froufe
    Scientific Reports.2020;[Epub]     CrossRef
  • Evaluation of laser cleaning for defouling of marine biofilm contamination on aluminum alloys
    Ze Tian, Zhenglong Lei, Xi Chen, Yanbin Chen
    Applied Surface Science.2020; 499: 144060.     CrossRef
  • Microbial Diversity and Phage–Host Interactions in the Georgian Coastal Area of the Black Sea Revealed by Whole Genome Metagenomic Sequencing
    Ekaterine Jaiani, Ia Kusradze, Tamar Kokashvili, Natia Geliashvili, Nino Janelidze, Adam Kotorashvili, Nato Kotaria, Archil Guchmanidze, Marina Tediashvili, David Prangishvili
    Marine Drugs.2020; 18(11): 558.     CrossRef
  • Effect of Tidal Cycles on Bacterial Biofilm Formation and Biocorrosion of Stainless Steel AISI 316L
    Leslie K. Daille, Javiera Aguirre, Diego Fischer, Carlos Galarce, Francisco Armijo, Gonzalo E. Pizarro, Magdalena Walczak, Rodrigo De la Iglesia, Ignacio T. Vargas
    Journal of Marine Science and Engineering.2020; 8(2): 124.     CrossRef
  • Degradability and biofouling of oxo-biodegradable polyethylene in the planktonic and benthic zones of the Arabian Gulf
    Raeid M.M. Abed, Thirumahal Muthukrishnan, Maryam Al Khaburi, Fahad Al-Senafi, Abdul Munam, Huda Mahmoud
    Marine Pollution Bulletin.2020; 150: 110639.     CrossRef
  • Changes in biofilm bacterial communities in response to combined effects of hypoxia, ocean acidification and nutrients from aquaculture activity in Three Fathoms Cove
    Jenny C.Y. Ng, Jill M.Y. Chiu
    Marine Pollution Bulletin.2020; 156: 111256.     CrossRef
  • Experimental Assessment of the Performance of Two Marine Coatings to Curb Biofilm Formation of Microfoulers
    Sara I. Faria, Rita Teixeira-Santos, Luciana C. Gomes, Elisabete R. Silva, João Morais, Vítor Vasconcelos, Filipe J. M. Mergulhão
    Coatings.2020; 10(9): 893.     CrossRef
  • Culture dependent and independent analysis and appraisal of early stage biofilm-forming bacterial community composition in the Southern coastal seawater of India
    Meora Rajeev, T.J. Sushmitha, Subba Rao Toleti, Shunmugiah Karutha Pandian
    Science of The Total Environment.2019; 666: 308.     CrossRef
  • Natural and non-toxic products from Fabaceae Brazilian plants as a replacement for traditional antifouling biocides: an inhibition potential against initial biofouling
    Vanessa Ochi Agostini, Alexandre José Macedo, Erik Muxagata, Márcia Vanusa da Silva, Grasiela Lopes Leães Pinho
    Environmental Science and Pollution Research.2019; 26(26): 27112.     CrossRef
  • Microplastic Ingestion by Gelatinous Zooplankton May Lower Efficiency of the Biological Pump
    Alina M. Wieczorek, Peter L. Croot, Fabien Lombard, Jerome N. Sheahan, Thomas K. Doyle
    Environmental Science & Technology.2019; 53(9): 5387.     CrossRef
  • Diversity and bacterial succession of a phototrophic biofilm used as complementary food for shrimp raised in a super-intensive culture
    Ángel Martín Ortiz-Estrada, Teresa Gollas-Galván, Luis Rafael Martínez-Córdova, Armando Burgos-Hernández, Susana María Scheuren-Acevedo, Mauricio Emerenciano, Marcel Martínez-Porchas
    Aquaculture International.2019; 27(2): 581.     CrossRef
  • Short-term succession of marine microbial fouling communities and the identification of primary and secondary colonizers
    Raeid M. M. Abed, Dhikra Al Fahdi, Thirumahal Muthukrishnan
    Biofouling.2019; 35(5): 526.     CrossRef
  • The composition of bacterial communities associated with plastic biofilms differs between different polymers and stages of biofilm succession
    Maria Pinto, Teresa M. Langer, Thorsten Hüffer, Thilo Hofmann, Gerhard J. Herndl, John J. Kelly
    PLOS ONE.2019; 14(6): e0217165.     CrossRef
  • Marine biofilms: diversity of communities and of chemical cues
    Jorge Antunes, Pedro Leão, Vitor Vasconcelos
    Environmental Microbiology Reports.2019; 11(3): 287.     CrossRef
  • Biofilm facilitates metal accumulation onto microplastics in estuarine waters
    Heather Richard, Edward J. Carpenter, Tomoko Komada, Peter T. Palmer, Chelsea M. Rochman
    Science of The Total Environment.2019; 683: 600.     CrossRef
  • Shear Stress as a Major Driver of Marine Biofilm Communities in the NW Mediterranean Sea
    Elisa C. P. Catão, Thomas Pollet, Benjamin Misson, Cédric Garnier, Jean-Francois Ghiglione, Raphaëlle Barry-Martinet, Marine Maintenay, Christine Bressy, Jean-François Briand
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Spatial Environmental Heterogeneity Determines Young Biofilm Assemblages on Microplastics in Baltic Sea Mesocosms
    Katharina Kesy, Sonja Oberbeckmann, Bernd Kreikemeyer, Matthias Labrenz
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Fouling Microbial Communities on Plastics Compared with Wood and Steel: Are They Substrate- or Location-Specific?
    Thirumahal Muthukrishnan, Maryam Al Khaburi, Raeid M. M. Abed
    Microbial Ecology.2019; 78(2): 361.     CrossRef
  • Analysis of cultivable aerobic bacterial community composition and screening for facultative sulfate-reducing bacteria in marine corrosive steel
    Xiaohong Li, Hui Xiao, Wenjun Zhang, Yongqian Li, Xuexi Tang, Jizhou Duan, Zhibo Yang, Jing Wang, Fang Guan, Guoqing Ding
    Journal of Oceanology and Limnology.2019; 37(2): 600.     CrossRef
  • Microbial Ecotoxicology of Marine Plastic Debris: A Review on Colonization and Biodegradation by the “Plastisphere”
    Justine Jacquin, Jingguang Cheng, Charlène Odobel, Caroline Pandin, Pascal Conan, Mireille Pujo-Pay, Valérie Barbe, Anne-Leila Meistertzheim, Jean-François Ghiglione
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Marine microplastic-associated bacterial community succession in response to geography, exposure time, and plastic type in China's coastal seawaters
    Xiyuan Xu, Shuai Wang, Fenglei Gao, Jingxi Li, Li Zheng, Chengjun Sun, Changfei He, Zongxing Wang, Lingyun Qu
    Marine Pollution Bulletin.2019; 145: 278.     CrossRef
  • Colonization of Non-biodegradable and Biodegradable Plastics by Marine Microorganisms
    Claire Dussud, Cindy Hudec, Matthieu George, Pascale Fabre, Perry Higgs, Stéphane Bruzaud, Anne-Marie Delort, Boris Eyheraguibel, Anne-Leïla Meistertzheim, Justine Jacquin, Jingguang Cheng, Nolwenn Callac, Charlène Odobel, Sophie Rabouille, Jean-François
    Frontiers in Microbiology.2018;[Epub]     CrossRef
  • Microplastic-associated bacterial assemblages in the intertidal zone of the Yangtze Estuary
    Peilin Jiang, Shiye Zhao, Lixin Zhu, Daoji Li
    Science of The Total Environment.2018; 624: 48.     CrossRef
  • Bio-cord plays a similar role as submerged macrophytes in harboring bacterial assemblages in an eco-ditch
    Lei Zhou, Chengrong Bai, Jian Cai, Yang Hu, Keqiang Shao, Guang Gao, Erik Jeppesen, Xiangming Tang
    Environmental Science and Pollution Research.2018; 25(26): 26550.     CrossRef
  • Biofilm early stage development in two nutrient‐rich streams with different urban impacts
    J. Cochero, M.M. Nicolosi Gelis, M.B. Sathicq, N. Gómez
    River Research and Applications.2018; 34(7): 755.     CrossRef
  • Reduced Chlorine in Drinking Water Distribution Systems Impacts Bacterial Biodiversity in Biofilms
    Claire Bertelli, Sophie Courtois, Marta Rosikiewicz, Philippe Piriou, Sébastien Aeby, Samuel Robert, Jean-François Loret, Gilbert Greub
    Frontiers in Microbiology.2018;[Epub]     CrossRef
  • Partial replacement of cement for waste aggregates in concrete coastal and marine infrastructure: A foundation for ecological enhancement?
    Ryan S. McManus, Nicholas Archibald, Sean Comber, Antony M. Knights, Richard C. Thompson, Louise B. Firth
    Ecological Engineering.2018; 120: 655.     CrossRef
  • Comparative study of biofilm formation on biocidal antifouling and fouling-release coatings using next-generation DNA sequencing
    Mark O. Winfield, Adrian Downer, Jennifer Longyear, Marie Dale, Gary L. A. Barker
    Biofouling.2018; 34(4): 464.     CrossRef
  • Lanosterol expressed bio-fouling inhibition on Gulf of Mannar coast, India
    Balasubramanian V., Rajaram R., Palanichamy S., Subramanian G., Mathivanan K., Pugazhendhi A.
    Progress in Organic Coatings.2018; 115: 100.     CrossRef
  • Design of a rotating disk reactor to assess the colonization of biofilms by free-living amoebae under high shear rates
    A. Perrin, P. Herbelin, F. P. A. Jorand, S. Skali-Lami, L. Mathieu
    Biofouling.2018; 34(4): 368.     CrossRef
  • Deep-sea anthropogenic macrodebris harbours rich and diverse communities of bacteria and archaea
    Lucy C. Woodall, Anna D. Jungblut, Kevin Hopkins, Andie Hall, Laura F. Robinson, Claire Gwinnett, Gordon L. J. Paterson, Daniele Daffonchio
    PLOS ONE.2018; 13(11): e0206220.     CrossRef
  • Amphiphilic polymer based on fluoroalkyl and PEG side chains for fouling release coating
    W W Cong, K Wang, X Y Yu, H Q Zhang, Z Lv, T J Gui
    IOP Conference Series: Materials Science and Engineering.2017; 283: 012002.     CrossRef
  • Analysis of Bacterial Community Composition of Corroded Steel Immersed in Sanya and Xiamen Seawaters in China via Method of Illumina MiSeq Sequencing
    Xiaohong Li, Jizhou Duan, Hui Xiao, Yongqian Li, Haixia Liu, Fang Guan, Xiaofan Zhai
    Frontiers in Microbiology.2017;[Epub]     CrossRef
  • Temporal Dynamics of Bacterial and Fungal Colonization on Plastic Debris in the North Sea
    Caroline De Tender, Lisa I. Devriese, Annelies Haegeman, Sara Maes, Jürgen Vangeyte, André Cattrijsse, Peter Dawyndt, Tom Ruttink
    Environmental Science & Technology.2017; 51(13): 7350.     CrossRef
  • Fate of Eight Different Polymers under Uncontrolled Composting Conditions: Relationships Between Deterioration, Biofilm Formation, and the Material Surface Properties
    Anne Mercier, Kevin Gravouil, Willy Aucher, Sandra Brosset-Vincent, Linette Kadri, Jenny Colas, Didier Bouchon, Thierry Ferreira
    Environmental Science & Technology.2017; 51(4): 1988.     CrossRef
  • Spatio-Temporal Variations of Marine Biofilm Communities Colonizing Artificial Substrata Including Antifouling Coatings in Contrasted French Coastal Environments
    Jean-François Briand, Aude Barani, Cédric Garnier, Karine Réhel, Félix Urvois, Christophe LePoupon, Agnès Bouchez, Didier Debroas, Christine Bressy
    Microbial Ecology.2017; 74(3): 585.     CrossRef
  • Cell-bound exopolysaccharides from an axenic culture of the intertidal mudflat Navicula phyllepta diatom affect biofilm formation by benthic bacteria
    Ibtissem Doghri, Johann Lavaud, Alain Dufour, Alexis Bazire, Isabelle Lanneluc, Sophie Sablé
    Journal of Applied Phycology.2017; 29(1): 165.     CrossRef
  • Plastics in the North Atlantic garbage patch: A boat-microbe for hitchhikers and plastic degraders
    Didier Debroas, Anne Mone, Alexandra Ter Halle
    Science of The Total Environment.2017; 599-600: 1222.     CrossRef
  • Development of tailored indigenous marine consortia for the degradation of naturally weathered polyethylene films
    Evdokia Syranidou, Katerina Karkanorachaki, Filippo Amorotti, Eftychia Repouskou, Kevin Kroll, Boris Kolvenbach, Philippe F-X Corvini, Fabio Fava, Nicolas Kalogerakis, Zhili He
    PLOS ONE.2017; 12(8): e0183984.     CrossRef
  • Influence of femtosecond laser produced nanostructures on biofilm growth on steel
    Nadja Epperlein, Friederike Menzel, Karin Schwibbert, Robert Koter, Jörn Bonse, Janin Sameith, Jörg Krüger, Jörg Toepel
    Applied Surface Science.2017; 418: 420.     CrossRef
  • Microplastics as a vector for the transport of the bacterial fish pathogen species Aeromonas salmonicida
    Manca Kovač Viršek, Marija Nika Lovšin, Špela Koren, Andrej Kržan, Monika Peterlin
    Marine Pollution Bulletin.2017; 125(1-2): 301.     CrossRef
  • Biofilm Formation and Heat Stress Induce Pyomelanin Production in Deep-Sea Pseudoalteromonas sp. SM9913
    Zhenshun Zeng, Xingsheng Cai, Pengxia Wang, Yunxue Guo, Xiaoxiao Liu, Baiyuan Li, Xiaoxue Wang
    Frontiers in Microbiology.2017;[Epub]     CrossRef
  • Multi metal assessment on biofilm formation in offshore environment
    Muthukumar Krishnan, Hans-Uwe Dahms, Palanichamy Seeni, Subramanian Gopalan, Vignesh Sivanandham, Kim Jin-Hyoung, Rathinam Arthur James
    Materials Science and Engineering: C.2017; 73: 743.     CrossRef
  • In Situ Confocal Raman Microscopy of Hydrated Early Stages of Bacterial Biofilm Formation on Various Surfaces in a Flow Cell
    Truis Smith-Palmer, Sicheng Lin, Ikenna Oguejiofor, Tianyang Leng, Amanda Pustam, Jin Yang, Lori L. Graham, Russell C. Wyeth, Cory D. Bishop, M. Edwin DeMont, David Pink
    Applied Spectroscopy.2016; 70(2): 289.     CrossRef
  • Microplastic in surface waters of urban rivers: concentration, sources, and associated bacterial assemblages
    Amanda R. McCormick, Timothy J. Hoellein, Maxwell G. London, Joshua Hittie, John W. Scott, John J. Kelly
    Ecosphere.2016;[Epub]     CrossRef
  • Succession of bacterial community structure during the early stage of biofilm development in the Antarctic marine environment
    Yung Mi Lee, Kyung Hee Cho, Kyuin Hwang, Eun Hye Kim, Mincheol Kim, Soon Gyu Hong, Hong Kum Lee
    The Korean Journal of Microbiology.2016; 52(1): 49.     CrossRef
  • Elevated nutrients change bacterial community composition and connectivity: high throughput sequencing of young marine biofilms
    Jasmin C. Lawes, Brett A. Neilan, Mark V. Brown, Graeme F. Clark, Emma L. Johnston
    Biofouling.2016; 32(1): 57.     CrossRef
  • Marine and estuarine natural microbial biofilms: ecological and biogeochemical dimensions
    O. Roger Anderson
    AIMS Microbiology.2016; 2(3): 304.     CrossRef
  • Flow Chamber System for the Statistical Evaluation of Bacterial Colonization on Materials
    Friederike Menzel, Bianca Conradi, Karsten Rodenacker, Anna Gorbushina, Karin Schwibbert
    Materials.2016; 9(9): 770.     CrossRef
  • Bacterial repopulation of drinking water pipe walls after chlorination
    Laurence Mathieu, Grégory Francius, Racha El Zein, Edith Angel, Jean-Claude Block
    Biofouling.2016; 32(8): 925.     CrossRef
  • Marine bacteria from the French Atlantic coast displaying high forming-biofilm abilities and different biofilm 3D architectures
    Ibtissem Doghri, Sophie Rodrigues, Alexis Bazire, Alain Dufour, David Akbar, Valérie Sopena, Sophie Sablé, Isabelle Lanneluc
    BMC Microbiology.2015;[Epub]     CrossRef
  • Marine microplastic-associated biofilms – a review
    Sonja Oberbeckmann, Martin G. J. Löder, Matthias Labrenz
    Environmental Chemistry.2015; 12(5): 551.     CrossRef
  • Low-concentration diffusible molecules affect the formation of biofilms by mixed marine communities
    David Ian Walker, Charles William Keevil, Rajni Hatti Kaul
    Cogent Biology.2015; 1(1): 1103830.     CrossRef
  • Modulation of violacein production and phenotypes associated with biofilm by exogenous quorum sensing N-acylhomoserine lactones in the marine bacterium Pseudoalteromonas ulvae TC14
    Armande Mireille Ayé, Maryse Bonnin-Jusserand, Florence Brian-Jaisson, Annick Ortalo-Magné, Gérald Culioli, Rose Koffi Nevry, Nadia Rabah, Yves Blache, Maëlle Molmeret
    Microbiology.2015; 161(10): 2039.     CrossRef
  • Variations in the abundance and structural diversity of microbes forming biofilms in a thermally stressed coral reef system
    Huda Mahmoud
    Marine Pollution Bulletin.2015; 100(2): 710.     CrossRef
  • Assessing the Antimicrobial Activity of Polyisoprene Based Surfaces
    Hope Badawy, Jérôme Brunellière, Marina Veryaskina, Guillaume Brotons, Sophie Sablé, Isabelle Lanneluc, Kelly Lambert, Pascal Marmey, Amy Milsted, Teresa Cutright, Arnaud Nourry, Jean-Luc Mouget, Pamela Pasetto
    International Journal of Molecular Sciences.2015; 16(3): 4392.     CrossRef
  • Bacterial Community Profiling of Plastic Litter in the Belgian Part of the North Sea
    Caroline A. De Tender, Lisa I. Devriese, Annelies Haegeman, Sara Maes, Tom Ruttink, Peter Dawyndt
    Environmental Science & Technology.2015; 49(16): 9629.     CrossRef
  • Rapid bacterial colonization of low-density polyethylene microplastics in coastal sediment microcosms
    Jesse P Harrison, Michaela Schratzberger, Melanie Sapp, A Mark Osborn
    BMC Microbiology.2014;[Epub]     CrossRef
  • Identification of Bacterial Strains Isolated from the Mediterranean Sea Exhibiting Different Abilities of Biofilm Formation
    Florence Brian-Jaisson, Annick Ortalo-Magné, Linda Guentas-Dombrowsky, Fabrice Armougom, Yves Blache, Maëlle Molmeret
    Microbial Ecology.2014; 68(1): 94.     CrossRef
  • Bacterial community dynamics during the early stages of biofilm formation in a chlorinated experimental drinking water distribution system: implications for drinking water discolouration
    I. Douterelo, R. Sharpe, J. Boxall
    Journal of Applied Microbiology.2014; 117(1): 286.     CrossRef
  • Fluorescence-Based Quasicontinuous and In Situ Monitoring of Biofilm Formation Dynamics in Natural Marine Environments
    M. Fischer, G. Friedrichs, T. Lachnit, C. R. Lovell
    Applied and Environmental Microbiology.2014; 80(12): 3721.     CrossRef
  • Dynamic shift in community structures of biofilm-forming bacteria by the pre-treatment systems of seawater reverse osmosis processes
    Hyokwan Bae, Dawoon Jeong, Heesun Kim, Seil Kim, Seockheon Lee
    Desalination.2014; 343: 17.     CrossRef
  • Integrated metagenomic and metaproteomic analyses of marine biofilm communities
    Dagmar H. Leary, Robert W. Li, Leila J. Hamdan, W. Judson Hervey, Nikolai Lebedev, Zheng Wang, Jeffrey R. Deschamps, Anne W. Kusterbeck, Gary J. Vora
    Biofouling.2014; 30(10): 1211.     CrossRef
  • Marine microbes in the Plastic Age
    A Mark Osborn, Slobodanka Stojkovic
    Microbiology Australia.2014; 35(4): 207.     CrossRef
  • Life under flow: A novel microfluidic device for the assessment of anti-biofilm technologies
    Maria Salta, Lorenzo Capretto, Dario Carugo, Julian A. Wharton, Keith R. Stokes
    Biomicrofluidics.2013;[Epub]     CrossRef
  • Biological activity in expanded clay (EC) and granulated activated carbon (GAC) seawater filters
    F. Xavier Simon, Ywann Penru, María M. Micó, Joan Llorens, Santiago Esplugas, Sylvie Baig
    Desalination.2013; 328: 67.     CrossRef
  • Identification of marine bacteria affecting lithium adsorbents in seawater
    Joo-Ae Kim, Mihye Kong, Ji-Ho Kim, Kang-Sup Chung, Chi-Yong Eom, Hye-On Yoon
    Environmental Geochemistry and Health.2013; 35(3): 311.     CrossRef
  • Marine biofilms on artificial surfaces: structure and dynamics
    Maria Salta, Julian A. Wharton, Yves Blache, Keith R. Stokes, Jean‐Francois Briand
    Environmental Microbiology.2013; 15(11): 2879.     CrossRef
  • Evaluation and optimization of nucleic acid extraction methods for the molecular analysis of bacterial communities associated with corroded carbon steel
    Florence Marty, Jean-François Ghiglione, Sandrine Païssé, Hervé Gueuné, Laurent Quillet, Mark C.M. van Loosdrecht, Gerard Muyzer
    Biofouling.2012; 28(4): 363.     CrossRef
  • Bacterial communities associated with the decomposition of Fucus vesiculosus in transitional waters
    Patrícia Martins, Marta Lobão Lopes, Ana Maria Rodrigues, Newton C.M. Gomes, Victor Quintino
    Estuarine, Coastal and Shelf Science.2012; 110: 116.     CrossRef
  • Pioneer marine biofilms on artificial surfaces including antifouling coatings immersed in two contrasting French Mediterranean coast sites
    Jean-François Briand, Ikram Djeridi, Dominique Jamet, Stéphane Coupé, Christine Bressy, Maëlle Molmeret, Brigitte Le Berre, Frédéric Rimet, Agnès Bouchez, Yves Blache
    Biofouling.2012; 28(5): 453.     CrossRef
  • Community characteristics of early biofilms formed on water distribution pipe materials
    Yeong-Kwan Kim, Sung-Gu Park, Dong-Hun Lee, Sung-Chan Choi
    Journal of The Korean Society of Water and Wastewater.2012; 26(6): 767.     CrossRef
  • Characterisation of the bacteria associated with barnacle, Balanus amphitrite, shell and their role in gregarious settlement of cypris larvae
    T. Bacchetti De Gregoris, L. Khandeparker, A.C. Anil, E. Mesbahi, J.G. Burgess, A.S. Clare
    Journal of Experimental Marine Biology and Ecology.2012; 413: 7.     CrossRef
  • Antifouling activity of commercial biocides vs. natural and natural-derived products assessed by marine bacteria adhesion bioassay
    Mercedes Camps, Jean-François Briand, Linda Guentas-Dombrowsky, Gérald Culioli, Alexis Bazire, Yves Blache
    Marine Pollution Bulletin.2011; 62(5): 1032.     CrossRef
  • Differences Between Bacterial Communities Associated with the Surface or Tissue of Mediterranean Sponge Species
    Berna Gerçe, Thomas Schwartz, Christoph Syldatk, Rudolf Hausmann
    Microbial Ecology.2011; 61(4): 769.     CrossRef
  • Development of Bacterial Biofilms on Artificial Corals in Comparison to Surface-Associated Microbes of Hard Corals
    Michael John Sweet, Aldo Croquer, John Christopher Bythell, Purification Lopez-Garcia
    PLoS ONE.2011; 6(6): e21195.     CrossRef
  • Changes in the relative abundance of biofilm-forming bacteria by conventional sand-filtration and microfiltration as pretreatments for seawater reverse osmosis desalination
    Hyokwan Bae, Heesun Kim, Seongpil Jeong, Seockheon Lee
    Desalination.2011; 273(2-3): 258.     CrossRef
  • Phylogenetic analysis of culturable marine bacteria in sediments from South Korean Yellow Sea
    Natarajan Velmurugan, Duraisamy Kalpana, Jae-Young Cho, Geon-Hyoung Lee, Suk-Hwan Park, Yang-Soo Lee
    Microbiology.2011; 80(2): 261.     CrossRef
  • Improvement of phylum- and class-specific primers for real-time PCR quantification of bacterial taxa
    Tristano Bacchetti De Gregoris, Nick Aldred, Anthony S. Clare, J. Grant Burgess
    Journal of Microbiological Methods.2011; 86(3): 351.     CrossRef
  • Pioneering bacterial and algal communities and potential extracellular enzyme activities of stream biofilms
    Elisabeth Pohlon, Jürgen Marxsen, Kirsten Küsel
    FEMS Microbiology Ecology.2010; 71(3): 364.     CrossRef
  • Both Leaf Properties and Microbe-Microbe Interactions Influence Within-Species Variation in Bacterial Population Diversity and Structure in the Lettuce ( Lactuca Species) Phyllosphere
    Paul J. Hunter, Paul Hand, David Pink, John M. Whipps, Gary D. Bending
    Applied and Environmental Microbiology.2010; 76(24): 8117.     CrossRef
  • Marine aerobic biofilm as biocathode catalyst
    Benjamin Erable, Ilse Vandecandelaere, Marco Faimali, Marie-Line Delia, Luc Etcheverry, Peter Vandamme, Alain Bergel
    Bioelectrochemistry.2010; 78(1): 51.     CrossRef
  • Bacterial biofilm-community selection during autohydrogenotrophic reduction of nitrate and perchlorate in ion-exchange brine
    Chang Hoon Ahn, Hyangkyun Oh, Dongwon Ki, Steven W. Van Ginkel, Bruce E. Rittmann, Joonhong Park
    Applied Microbiology and Biotechnology.2009; 81(6): 1169.     CrossRef
  • Molecular identification of fecal pollution sources in water supplies by host-specific fecal DNA markers and Terminal Restriction Fragment Length Polymorphism profiles of 16S rRNA gene
    Ju-Yong Jeong, Kyung-Ik Gil, Kyong-Hee Lee, Jong-Ok Ka
    The Journal of Microbiology.2008; 46(6): 599.     CrossRef
Reviews
MINIREVIEW] Toxin-producing Cyanobacteria in Freshwater: A Review of the Problems, Impact on Drinking Water Safety, and Efforts for Protecting Public Health
Melissa Y. Cheung , Song Liang , Jiyoung Lee
J. Microbiol. 2013;51(1):1-10.   Published online March 2, 2013
DOI: https://doi.org/10.1007/s12275-013-2549-3
  • 229 View
  • 0 Download
  • 177 Crossref
AbstractAbstract PDF
Cyanobacteria have adapted to survive in a variety of environments and have been found globally. Toxin-producing cyanobacterial harmful algal blooms (CHABs) have been increasing in frequency worldwide and pose a threat to drinking and recreational water. In this study, the prevalence, impact of CHABs and mitigation efforts were reviewed, focusing on the Lake Erie region and Ohio’s inland lakes that have been impacted heavily as an example so that the findings can be transferrable to other parts of the world that face the similar problems due to the CHABs in their freshwater environments. This paper provides a basic introduction to CHABs and their toxins as well as an overview of public health implications including exposure routes, health effects, and drinking water issues, algal bloom advisory practices in Ohio, toxin measurements results in Ohio public water supplies, and mitigation efforts.

Citations

Citations to this article as recorded by  
  • Current Capabilities and Challenges of Remote Sensing in Monitoring Freshwater Cyanobacterial Blooms: A Scoping Review
    Jianyong Wu, Yanni Cao, Shuqi Wu, Smita Parajuli, Kaiguang Zhao, Jiyoung Lee
    Remote Sensing.2025; 17(5): 918.     CrossRef
  • Physicochemical and statistical analysis of water and microplastics in a drinking water reservoir in México
    Francisco Agustín Reyes-García, Estefanía Martínez-Tavera, Sonia Martínez-Gallegos, Javier Illescas
    MRS Advances.2025; 10(6): 800.     CrossRef
  • Elucidation of Mechanisms by Which Microplastics (PET) Facilitates the Rapid Growth of Benthic Cyanobacteria and Toxin Production in Aquatic Ecosystems
    Rashid Mir, Shrooq Albarqi, Wed Albalawi, Ghaida Alanazi, Shouq S. Alsubaie, Razan I. Alghaban, Hanadi Saud Alanazi, Nora Taleb Alsharif, Manal M. Aljammaz, Nouf Faisal Alghabban, Wafaa Seluman Alhwiti, Alaa Albogmi, Faras Falah Alblwi
    Metabolites.2025; 15(6): 383.     CrossRef
  • Uncovering microbial interactions in a persistent Planktothrix bloom: Towards early biomarker identification in hypereutrophic lakes
    Mashuk Siddiquee, Sara Cornelius, Youngwoo Seo, George S. Bullerjahn, Thomas B. Bridgeman, Mike Sudman Jr., Dae-Wook Kang
    Water Research.2025; 283: 123683.     CrossRef
  • Investigation into Paralytic Shellfish Toxins and Microcystins in Seabirds from Portugal
    Lucía Soliño, Andrew D. Turner, Begoña Ben-Gigirey, Ryan P. Alexander, Karl J. Dean, Robert G. Hatfield, Benjamin H. Maskrey, María V. Mena Casero
    Toxins.2025; 17(3): 135.     CrossRef
  • Field-scale artificial floating islands reduces cyanotoxin from residential raw sewage treatment basin
    Zhaozhe Chen, Jiyoung Lee, Molly Mills, Abigail Volk, Ozeas S. Costa
    Ecological Engineering.2025; 212: 107543.     CrossRef
  • Single and combined toxicity of copper and cadmium on Microcystis aeruginosa: effects on growth, oxidative stress and gene expression
    Qing Cao, Bensheng You, Haibo Xu, Weijing Liu, Shuzhan Ma
    Environmental Earth Sciences.2025;[Epub]     CrossRef
  • Disproportionate Economic and Regulatory Challenges of Harmful Algal Blooms in Vulnerable Communities: A Multidisciplinary Analysis
    Rachel Kennard, Samuel Sandoval-Solis
    Journal of Water Resources Planning and Management.2025;[Epub]     CrossRef
  • Dominant Dolichospermum and microcystin production in Detroit Lake (Oregon, USA)
    Youchul Jeon, Ian Struewing, Kale Clauson, Nathan Reetz, Ned Fairchild, Lacey Goeres-Priest, Theo W. Dreher, Rochelle Labiosa, Kurt D. Carpenter, Barry H. Rosen, Eric N. Villegas, Jingrang Lu
    Harmful Algae.2025; 142: 102802.     CrossRef
  • A review on remote-sensing-based harmful cyanobacterial bloom monitoring services
    Nasim Janatian, Urmas Raudsepp, Parya Broomandi, Kate Fickas, Kalle Olli, Timo Heimovaara, Aarne Mannik, Rivo Uiboupin, Nima Pahlevan
    Remote Sensing Applications: Society and Environment.2025; 37: 101488.     CrossRef
  • Key drivers of microcystin-producing cyanobacteria in South Korean eutrophic waters determined with data-driven models
    Jayun Kim, Jiyoung Lee, Jason W. Marion, Joonhong Park
    Journal of Environmental Management.2025; 392: 126616.     CrossRef
  • Bacteriophages carry auxiliary metabolic genes related to energy, sulfur and phosphorus metabolism during a harmful algal bloom in a freshwater lake
    Bishav Bhattarai, Ananda Shankar Bhattacharjee, Felipe H. Coutinho, Hanyan Li, Sreeni Chadalavada, Ramesh Goel
    Chemosphere.2025; 370: 143819.     CrossRef
  • Monitoring cyanobacteria temporal dynamics in a hypereutrophic lake using remote sensing: From multispectral to hyperspectral
    Samantha L. Sharp, Alicia Cortés, Alexander L. Forrest, Carl J. Legleiter, Liane S. Guild, Yufang Jin, S. Geoffrey Schladow
    Remote Sensing Applications: Society and Environment.2025; 39: 101704.     CrossRef
  • Potential Linkage Between Zebra Mussel Establishment, Cyanobacterial Community Composition, and Microcystin Levels in United States Lakes
    Feng Zhang, Jayun Kim, Ozeas S. Costa, Song Liang, Jiyoung Lee
    Toxins.2025; 17(9): 447.     CrossRef
  • Profiling domestic water bacteriome within the rainwater harvesting-dependent community of Carriacou Island, Grenada in the Southern Caribbean
    Akilah T. M. Stewart, Adrian Cashman, John Agard, Dave Chadee, Adesh Ramsubhag, Guillaume Wright
    PLOS Water.2025; 4(8): e0000380.     CrossRef
  • Unraveling the mysteries of the plastisphere: a comprehensive analysis of its composition, toxicity, and ecological impact
    Malika Moncer, Asma Hamza, Lamia Trabelsi
    Journal of Sedimentary Environments.2025; 10(2): 303.     CrossRef
  • Report of the Scientific Committee of the Spanish Agency for Food Safety and Nutrition (AESAN) on the effects of climate change on the risk of transmission of foodborne pathogens
    Antonio Valero Díaz, Rosa María Capita González, Baltasar Mayo Pérez, Azucena del Carmen Mora Gutiérrez, María Dolores Rodrigo Aliaga, Gloria Sánchez Moragas, Paula Arrabal Durán
    Food Risk Assess Europe.2025;[Epub]     CrossRef
  • A novel artificial intelligence–powered cell counting tool coupled with digital microscopy for rapid field‐assessment of harmful cyanobacterial blooms
    Igor Mrdjen, Zacharias J. Smith, Abby M. Webster, Christopher C. Nack, Bryan Arndt, Danara Dormaeva, Gregory L. Boyer, N. Roxanna Razavi, Stephen B. Shaw
    Limnology and Oceanography: Methods.2025; 23(11): 788.     CrossRef
  • Climate variability is an important driver of water treatability in a shallow reservoir
    Danielle S. Spence, Kristin J. Painter, Ali Nazemi, Jason J. Venkiteswaran, Helen M. Baulch
    Science of The Total Environment.2025; 1004: 180786.     CrossRef
  • Mitigating harmful cyanobacterial blooms in drinking water reservoirs through in-situ sediment resuspension
    Jiao Fang, Yande Li, Ming Su, Tengxin Cao, Xufeng Sun, Yufan Ai, Jinyi Qin, Jianwei Yu, Min Yang
    Water Research.2024; 267: 122509.     CrossRef
  • Monitoring network optimization and impact of fish farming upon water quality in the Três Marias Hydroelectric Reservoir, Brazil
    Maria Clara V M Starling, Cristiano Christofaro, Luiz Eduardo Macedo-Reis, Phillippe Maillard, Camila C Amorim
    Environmental Science and Pollution Research.2024; 31(9): 13455.     CrossRef
  • Food Webs and Feedbacks: The Untold Ecological Relevance of Antimicrobial Resistance as Seen in Harmful Algal Blooms
    Aabir Banerji, Nichole E. Brinkman, Benjamin Davis, Alison Franklin, Michael Jahne, Scott P. Keely
    Microorganisms.2024; 12(11): 2121.     CrossRef
  • Reliable assessment and prediction of moderate preoxidation of sodium hypochlorite for algae-laden water treatment
    Zhiwei Zhou, Tianjie Sun, Xing Li, Jiawei Ren, Zedong Lu, Yuankun Liu, Kai Li, Fangshu Qu
    Water Research.2024; 266: 122398.     CrossRef
  • A rapid and efficient method using electroporation for releasing intracellular microcystin toxins from cultured and naturally occurring cyanobacterial cells in lake water
    Yuehan Ai, Paul Bertani, Hao Yang, Seungjun Lee, Wu Lu, Jiyoung Lee
    Marine Pollution Bulletin.2024; 198: 115890.     CrossRef
  • Cyanobacterial Cyclic Peptides Can Disrupt Cytoskeleton Organization in Human Astrocytes—A Contribution to the Understanding of the Systemic Toxicity of Cyanotoxins
    Anja Bubik, Robert Frangež, Monika C. Žužek, Ion Gutiérrez-Aguirre, Tamara T. Lah, Bojan Sedmak
    Toxins.2024; 16(9): 374.     CrossRef
  • Toward a Brighter Future: Enhanced Sustainable Methods for Preventing Algal Blooms and Improving Water Quality
    Su-Ok Hwang, In-Hwan Cho, Ha-Kyung Kim, Eun-A Hwang, Byung-Hun Han, Baik-Ho Kim
    Hydrobiology.2024; 3(2): 100.     CrossRef
  • Snapshot of cyanobacterial toxins in Pakistani freshwater bodies
    Uzma Batool, Nicolas Tromas, Dana F. Simon, Sébastien Sauvé, B. Jesse Shapiro, Mehboob Ahmed
    Environmental Science and Pollution Research.2024; 31(16): 24648.     CrossRef
  • Assessment of the Applicability of Compact Aerating Reactors for the Improvement of Water Quality in a Small Water Body Functioning in an Agricultural Catchment
    Stanisław Chmiel, Marta Ziółek, Magdalena Kończak, Mariusz Pliżga, Beata Zielińska, Grzegorz Maliszewski, Mirosław Biruk, Sylwia Duda-Saternus
    Sustainability.2024; 16(13): 5629.     CrossRef
  • Dynamic microbiome and mobile resistome are revealed in river biofilms from a multi-use watershed through long-read sequencing
    Molly Mills, Thomas Wittum, Jiyoung Lee
    Frontiers in Environmental Science.2024;[Epub]     CrossRef
  • Disinfection Byproducts and Their Precursors in Drinking Water Sources: Origins, Influencing Factors, and Environmental Insights
    Rong Xiao, Yang Deng, Zuxin Xu, Wenhai Chu
    Engineering.2024; 36: 36.     CrossRef
  • A novel index reveals disconnects between recreational harmful algal bloom exposure risks and responses among U.S. states
    Walter K. Dodds, Sophia M. Bonjour, Molly Fisher, Laura J. Krueger, Peter J. Pfaff, Md. Abu Raihan, Olivia Rode
    JAWRA Journal of the American Water Resources Association.2024; 60(2): 273.     CrossRef
  • Harmful Cyanobacterial Blooms: Going beyond the “Green” to Monitor and Predict HCBs
    Daniela R. de Figueiredo
    Hydrobiology.2024; 3(1): 11.     CrossRef
  • Two duckweed species exhibit variable tolerance to microcystin-LR exposure across genotypic lineages
    Lacey D. Rzodkiewicz, Martin M. Turcotte
    Harmful Algae.2024; 131: 102548.     CrossRef
  • Urban stormwater green infrastructure: Evaluating the public health service role of bioretention using microbial source tracking and bacterial community analyses
    Emma Lancaster, Ryan Winston, Jay Martin, Jiyoung Lee
    Water Research.2024; 259: 121818.     CrossRef
  • Molecular Detection of Cylindrospermopsin-Producing Cyanobacteria in the Coasts of Hormozgan Province, Iran
    Elmira Eivazpour Nami, Mohammad Hassan Shah Hoseini, Alireza Dehnad
    Avicenna Journal of Clinical Microbiology and Infection.2024; 11(1): 17.     CrossRef
  • Expert insights on managing harmful algal blooms
    Sarah Goodrich, Katherine Nicole Canfield, Kate Mulvaney
    Frontiers in Freshwater Science.2024;[Epub]     CrossRef
  • Cyanobacteria Harmful Algae Blooms: Causes, Impacts, and Risk Management
    Aboi Igwaran, Adeoye John Kayode, Karabelo M. Moloantoa, Zenzile P. Khetsha, John Onolame Unuofin
    Water, Air, & Soil Pollution.2024;[Epub]     CrossRef
  • Tracing the fate of microcystins from irrigation water to food chains: Studies with Fragaria vulgaris and Meriones shawi
    Mohammed Haida, Fatima El khalloufi, Lahcen Tamegart, Richard Mugani, Yasser Essadki, El Mahdi Redouane, Joana Azevedo, Mário Jorge Araújo, Alexandre Campos, Vitor Vasconcelos, Halima Gamrani, Brahim Oudra
    Toxicon.2023; 236: 107345.     CrossRef
  • Microcystin-leucine-arginine affects brain gene expression programs and behaviors of offspring through paternal epigenetic information
    Jiayi Xu, Weiyun Zhang, Shengzheng Zhong, Xinxin Xie, Huimin Che, Weirong Si, Xun Tuo, Dexiang Xu, Sujuan Zhao
    Science of The Total Environment.2023; 857: 159032.     CrossRef
  • Application of solid phase adsorption toxin tracking technology (SPATT) for monitoring microcystins in farm dams in Levubu farming area, South Africa
    G.K. Pindihama, W.M. Gitari, S. Mukangaya
    Physics and Chemistry of the Earth, Parts A/B/C.2023; 132: 103500.     CrossRef
  • Prediction of algal bloom using a combination of sparse modeling and a machine learning algorithm: Automatic relevance determination and support vector machine
    Yohei Miura, Hiroomi Imamoto, Yasuhiro Asada, Masaki Sagehashi, Michihiro Akiba, Osamu Nishimura, Daisuke Sano
    Ecological Informatics.2023; 78: 102337.     CrossRef
  • Water Quality and Toxic Cyanobacteria in Oligohaline Estuary Beaches During the Longest Mississippi River Basin Flood Event in 2019
    Sibel Bargu, Brady Skaggs, Monique Boudreaux, Courtney N. Hammond, Callie Snow, Tiong Gim Aw, Richard Stumpf
    Estuaries and Coasts.2023; 46(7): 1865.     CrossRef
  • Harmful Algal Blooms: A Prolific Issue in Urban Stormwater Ponds
    Amy E. Grogan, Catharina Alves-de-Souza, Lawrence B. Cahoon, Michael A. Mallin
    Water.2023; 15(13): 2436.     CrossRef
  • Oral Palatability and Owners’ Perception of the Effect of Increasing Amounts of Spirulina (Arthrospira platensis) in the Diet of a Cohort of Healthy Dogs and Cats
    Davide Stefanutti, Gloria Tonin, Giada Morelli, Raffaella Margherita Zampieri, Nicoletta La Rocca, Rebecca Ricci
    Animals.2023; 13(8): 1275.     CrossRef
  • Short-Term Meteorological Conditions Explain Cyanobacterial Blooms in a Tropical Reservoir
    Florencia Soledad Alvarez Dalinger, Verónica Laura Lozano, Claudia Nidia Borja, Liliana Beatriz Moraña, Salusso María Mónica
    Water.2023; 15(2): 302.     CrossRef
  • A rapid LC-MS/MS method for multi-class identification and quantification of cyanotoxins
    Fernanda Rios Jacinavicius, Thaíssa Giovanna Valverde Campos, Larissa Souza Passos, Ernani Pinto, Vanessa Geraldes
    Toxicon.2023; 234: 107282.     CrossRef
  • Cyanotoxins in groundwater; occurrence, potential sources, health impacts and knowledge gap for public health
    Mulalo I. Mutoti, Joshua N. Edokpayi, Ntwanano Mutileni, Olatunde S. Durowoju, Fhatuwani L. Munyai
    Toxicon.2023; 226: 107077.     CrossRef
  • Patterns and impacts of cyanobacteria in a deep, thermally stratified, oligotrophic lake
    Anthony R. Prestigiacomo, Rebecca M. Gorney, James B. Hyde, Courtney Davis, Aimee Clinkhammer
    AWWA Water Science.2023;[Epub]     CrossRef
  • Beneath the surface: spatial and temporal trends in water quality and its impacts on algal community composition in the Albemarle Sound, North Carolina
    Emma T. Brentjens, Anika R. Bratt
    Aquatic Ecology.2023; 57(2): 243.     CrossRef
  • Toxicity effects of disinfection byproduct chloroacetic acid to Microcystis aeruginosa: Cytotoxicity and mechanisms
    Jing Ye, Jiawei Ni, Fuxiang Tian, Xiyan Ji, Meifang Hou, Yuanting Li, Lei Yang, Runxiang Wang, Wenwu Xu, Liang Meng
    Journal of Environmental Sciences.2023; 129: 229.     CrossRef
  • Facilitating the determination of microcystin toxins with bio-inspired sensors
    Bingzhi Li, Qiusu Wang, Muhammad Sohail, Xing Zhang, Huan He, Lei Lin
    Microchemical Journal.2023; 189: 108482.     CrossRef
  • Host microbiome associated low intestinal acetate correlates with progressive NLRP3-dependent hepatic-immunotoxicity in early life microcystin-LR exposure
    Madhura More, Somdatta Chatterjee, Punnag Saha, Dipro Bose, Ayushi Trivedi, Subhajit Roy, Saurabh Chatterjee
    BMC Pharmacology and Toxicology.2023;[Epub]     CrossRef
  • Microcystin Concentrations, Partitioning, and Structural Composition during Active Growth and Decline: A Laboratory Study
    Emily F. Pierce, Astrid Schnetzer
    Toxins.2023; 15(12): 684.     CrossRef
  • Scenario-based land use modeling for nutrient management in the Skaneateles Lake Watershed
    Robert A. Rioux, Aaron L. Strong
    Environmental Challenges.2023; 12: 100739.     CrossRef
  • Beyond cyanotoxins: increased Legionella, antibiotic resistance genes in western Lake Erie water and disinfection-byproducts in their finished water
    Jiyoung Lee, Seungjun Lee, Chenlin Hu, Jason W. Marion
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Harmful and beneficial properties of cyanotoxins: Two sides of the same coin
    Annarita Ricciardelli, Antonino Pollio, Maria Costantini, Valerio Zupo
    Biotechnology Advances.2023; 68: 108235.     CrossRef
  • Cyanobacterial biomass prediction in a shallow lake using the time series SARIMAX models
    Yan Guo, Xijun Lai, Min Gan
    Ecological Informatics.2023; 78: 102292.     CrossRef
  • Field application of biologically derived substances (BDSs: Naphthoquinone derivative) for eco-friendly mitigation of harmful cyanobacterial blooms
    Jae-Hyoung Joo, Yoon-Ho Kang, Zhun Li, Sae-Hee Kim, Bum Soo Park, Myung-Soo Han
    Journal of Applied Phycology.2023; 35(5): 2271.     CrossRef
  • Freshwater Mussels, Ecosystem Services, and Clean Water Regulation in Minnesota: Formulating an Effective Conservation Strategy
    Baishali Bakshi, R. William Bouchard, Robert Dietz, Daniel Hornbach, Philip Monson, Bernard Sietman, Dennis Wasley
    Water.2023; 15(14): 2560.     CrossRef
  • Evaluation of planktonic cyanobacteria in Peruvian freshwater lentic water bodies: prevalence and regulatory framework to aid policy making
    Anthony Salazar-Torres, Danny Robles, Alonso Reyes, Mónica C. Santa-Maria, Patrick Venail
    Environmental Monitoring and Assessment.2023;[Epub]     CrossRef
  • Examination of Microcystin Adsorption by the Type of Plastic Materials Used during the Procedure of Microcystin Analysis
    Chan Seo, Joo Won Lee, Won-Kyo Jung, Yoon-Mi Lee, Seungjun Lee, Sang Gil Lee
    Toxins.2022; 14(9): 625.     CrossRef
  • Immobilization of Microbes for Biodegradation of Microcystins: A Mini Review
    Jiajia Zhang, Jia Wei, Isaac Yaw Massey, Tangjian Peng, Fei Yang
    Toxins.2022; 14(8): 573.     CrossRef
  • Harmful algal bloom-related 311 calls, Cape Coral, Florida 2018–2019
    Christopher K. Uejio, Elaina Gonsoroski, Samendra P. Sherchan, Leslie Beitsch, E. W. Harville, C. Blackmore, K. Pan, Maureen Y. Lichtveld
    Journal of Water and Health.2022; 20(3): 531.     CrossRef
  • The success of the bloom-forming cyanobacteria Planktothrix: Genotypes variability supports variable responses to light and temperature stress
    Sandra Kim Tiam, Katia Comte, Caroline Dalle, Marine Delagrange, Chakib Djediat, Bertrand Ducos, Charlotte Duval, Kathleen Feilke, Sahima Hamlaoui, Séverine Le Manach, Pierre Setif, Claude Yéprémian, Benjamin Marie, Diana Kirilovsky, Muriel Gugger, Cécile
    Harmful Algae.2022; 117: 102285.     CrossRef
  • High-resolution temporal detection of cyanobacterial blooms in a deep and oligotrophic lake by high-frequency buoy data
    Manxue Zhang, Yunlin Zhang, Jianming Deng, Miao Liu, Yongqiang Zhou, Yibo Zhang, Kun Shi, Cuiling Jiang
    Environmental Research.2022; 203: 111848.     CrossRef
  • Multiple roles of bamboo as a regulator of cyanobacterial bloom in aquatic systems
    Aimin Hao, Mengyao Su, Sohei Kobayashi, Min Zhao, Yasushi Iseri
    Scientific Reports.2022;[Epub]     CrossRef
  • Relationship between freshwater harmful algal blooms and neurodegenerative disease incidence rates in South Korea
    Seungjun Lee, Boseung Choi, Sung Jae Kim, Jinnam Kim, Dayun Kang, Jiyoung Lee
    Environmental Health.2022;[Epub]     CrossRef
  • Occurrence of cyanobacteria in water used for food production: A review
    Mulalo Mutoti, Jabulani Gumbo, Afam Israel Obiefuna Jideani
    Physics and Chemistry of the Earth, Parts A/B/C.2022; 125: 103101.     CrossRef
  • Detection and Occurrence of Microcystins and Nodularins in Lake Manatee and Lake Washington-Two Floridian Drinking Water Systems
    Rajesh Melaram, Brandon Lopez-Dueñas
    Frontiers in Water.2022;[Epub]     CrossRef
  • Evaluation of the Role of Probiotics As a New Strategy to Eliminate Microbial Toxins: a Review
    Abdolamir Ghadaksaz, Somayeh Mousavi Nodoushan, Hamid Sedighian, Elham Behzadi, Abbas Ali Imani Fooladi
    Probiotics and Antimicrobial Proteins.2022; 14(2): 224.     CrossRef
  • Octocrylene: From Sunscreens to the Degradation Pathway during Chlorination Processes: Formation of Byproducts and Their Ecotoxicity Assessment
    Antonio Medici, Lorenzo Saviano, Antonietta Siciliano, Giovanni Libralato, Marco Guida, Lucio Previtera, Giovanni Di Fabio, Armando Zarrelli
    Molecules.2022; 27(16): 5286.     CrossRef
  • Health impact assessment of air pollution in an area of the largest coal mine in Brazil
    Laiz Coutelle Honscha, Julia Oliveira Penteado, Valério de Sá Gama, Alícia da Silva Bonifácio, Priscila Aikawa, Marina dos Santos, Paulo Roberto Martins Baisch, Ana Luíza Muccillo-Baisch, Flavio Manoel Rodrigues da Silva Júnior
    Environmental Science and Pollution Research.2022; 29(10): 14176.     CrossRef
  • Comparative genomic analysis of five freshwater cyanophages and reference-guided metagenomic data mining
    Kang Du, Feng Yang, Jun-Tao Zhang, Rong-Cheng Yu, Ziqing Deng, Wei-Fang Li, Yuxing Chen, Qiong Li, Cong-Zhao Zhou
    Microbiome.2022;[Epub]     CrossRef
  • Prediction of Microcystis Occurrences and Analysis Using Machine Learning in High-Dimension, Low-Sample-Size and Imbalanced Water Quality Data
    Masaya Mori, Roberto Gonzalez Flores, Yoshihiro Suzuki, Kei Nukazawa, Toru Hiraoka, Hirofumi Nonaka
    Harmful Algae.2022; 117: 102273.     CrossRef
  • Near‐term phytoplankton forecasts reveal the effects of model time step and forecast horizon on predictability
    Whitney M. Woelmer, R. Quinn Thomas, Mary E. Lofton, Ryan P. McClure, Heather L. Wander, Cayelan C. Carey
    Ecological Applications.2022;[Epub]     CrossRef
  • Identifying the influence of zebra and quagga mussels on sedimentary phosphorus dynamics in western Lake Erie
    Fasong Yuan, Robert A. Krebs, Amanda N. Wagner
    Hydrobiologia.2021; 848(8): 1897.     CrossRef
  • Effects of harmful algal blooms on regulated disinfection byproducts: Findings from five utility case studies
    Katherine Foreman, Deborah Vacs Renwick, Morgan McCabe, Adam Cadwallader, Hannah Holsinger, Charlene Kormondy, Ryan Albert
    AWWA Water Science.2021;[Epub]     CrossRef
  • Rapid detection and quantification of microcystins in surface water by an impedimetric immunosensor
    Abraham O. Ogungbile, Idan Ashur, Itzik Icin, Orr H. Shapiro, Sefi Vernick
    Sensors and Actuators B: Chemical.2021; 348: 130687.     CrossRef
  • Florida’s Harmful Algal Bloom (HAB) Problem: Escalating Risks to Human, Environmental and Economic Health With Climate Change
    Cynthia Ann Heil, Amanda Lorraine Muni-Morgan
    Frontiers in Ecology and Evolution.2021;[Epub]     CrossRef
  • Killing effect of deinoxanthins on cyanobloom-forming Microcystis aeruginosa: Eco-friendly production and specific activity of deinoxanthins
    Wonjae Kim, Minkyung Kim, Minyoung Hong, Woojun Park
    Environmental Research.2021; 200: 111455.     CrossRef
  • Design and Preliminary Testing of an In-Field Passive Treatment System for Removing Phosphorus from Surface Water
    George Carleton, Jessica Glowczewski, Teresa Cutright
    Applied Sciences.2021; 11(9): 3743.     CrossRef
  • A machine learning approach for early warning of cyanobacterial bloom outbreaks in a freshwater reservoir
    Yongeun Park, Han Kyu Lee, Jae-Ki Shin, Kangmin Chon, SungHwan Kim, Kyung Hwa Cho, Jin Hwi Kim, Sang-Soo Baek
    Journal of Environmental Management.2021; 288: 112415.     CrossRef
  • Harmful Cyanobacterial Blooms (HCBs): innovative green bioremediation process based on anti-cyanobacteria bioactive natural products
    Soukaina El Amrani Zerrifi, Richard Mugani, El Mahdi Redouane, Fatima El Khalloufi, Alexandre Campos, Vitor Vasconcelos, Brahim Oudra
    Archives of Microbiology.2021; 203(1): 31.     CrossRef
  • Uncovering Research Trends of Phycobiliproteins Using Bibliometric Approach
    Hui Teng Tan, Fatimah Md. Yusoff, Yam Sim Khaw, Siti Aqlima Ahmad, Noor Azmi Shaharuddin
    Plants.2021; 10(11): 2358.     CrossRef
  • Controlling Eutrophication via Surface Aerators in Irregular-Shaped Urban Ponds
    Aimin Hao, Sohei Kobayashi, Dong Xia, Qi Mi, Ning Yan, Mengyao Su, Aishou Lin, Min Zhao, Yasushi Iseri
    Water.2021; 13(23): 3360.     CrossRef
  • Acute health effects associated with satellite-determined cyanobacterial blooms in a drinking water source in Massachusetts
    Jianyong Wu, Elizabeth D. Hilborn, Blake A. Schaeffer, Erin Urquhart, Megan M. Coffer, Cynthia J. Lin, Andrey I. Egorov
    Environmental Health.2021;[Epub]     CrossRef
  • Acclimation of an algal consortium to sequester nutrients from anaerobic digestate
    Qichen Wang, Jessa Cherones, Brendan Higgins
    Bioresource Technology.2021; 342: 125921.     CrossRef
  • Complete sequence and structure of the genome of the harmful algal bloom-forming cyanobacterium Planktothrix agardhii NIES-204T and detailed analysis of secondary metabolite gene clusters
    Yohei Shimura, Takatomo Fujisawa, Yuu Hirose, Naomi Misawa, Yu Kanesaki, Yasukazu Nakamura, Masanobu Kawachi
    Harmful Algae.2021; 101: 101942.     CrossRef
  • Inhibition of endoplasmic reticulum stress-related autophagy attenuates MCLR-induced apoptosis in zebrafish testis and mouse TM4 cells
    Zaiwei Wu, Fang Wang, Liwen Hu, Jianrong Zhang, Daojun Chen, Sujuan Zhao
    Ecotoxicology and Environmental Safety.2021; 221: 112438.     CrossRef
  • Expanding ecological assessment by integrating microorganisms into routine freshwater biomonitoring
    M. Sagova-Mareckova, J. Boenigk, A. Bouchez, K. Cermakova, T. Chonova, T. Cordier, U. Eisendle, T. Elersek, S. Fazi, T. Fleituch, L. Frühe, M. Gajdosova, N. Graupner, A. Haegerbaeumer, A.-M. Kelly, J. Kopecky, F. Leese, P. Nõges, S. Orlic, K. Panksep, J.
    Water Research.2021; 191: 116767.     CrossRef
  • Recent trends in the detection of freshwater cyanotoxins with a critical note on their occurrence in Asia
    Prabir Kumar Kulabhusan, Katrina Campbell
    Trends in Environmental Analytical Chemistry.2021; 32: e00150.     CrossRef
  • Acute cyanotoxin poisoning reveals a marginal effect on mouse gut microbiome composition but indicates metabolic shifts related to liver and gut inflammation
    Molly C. Mills, Morgan V. Evans, Seungjun Lee, Thomas Knobloch, Christopher Weghorst, Jiyoung Lee
    Ecotoxicology and Environmental Safety.2021; 215: 112126.     CrossRef
  • Quantifying Scales of Spatial Variability of Cyanobacteria in a Large, Eutrophic Lake Using Multiplatform Remote Sensing Tools
    Samantha L. Sharp, Alexander L. Forrest, Keith Bouma-Gregson, Yufang Jin, Alicia Cortés, S. Geoffrey Schladow
    Frontiers in Environmental Science.2021;[Epub]     CrossRef
  • Climate Change and Emerging Food Safety Issues: A Review
    Ramona A. Duchenne-Moutien, Hudaa Neetoo
    Journal of Food Protection.2021; 84(11): 1884.     CrossRef
  • Assessing Impacts of Changes in External Nutrient Loadings on a Temperate Chinese Drinking Water Reservoir
    Qingchuan Chou, Anders Nielsen, Tobias K. Andersen, Fenjuan Hu, Weiyu Chen, Xiaolin Zhang, Te Cao, Leyi Ni, Erik Jeppesen, Dennis Trolle
    Frontiers in Environmental Science.2021;[Epub]     CrossRef
  • Diatomite-enhanced coagulation for algal removal in polluted raw water: performance optimization and pilot-scale study
    Chao Jiang, Wei Ding, Weitang Zhu, Liang Zhu, Xiangyang Xu
    Environmental Science and Pollution Research.2021; 28(36): 50204.     CrossRef
  • The Application of Potassium Permanganate to Treat Cyanobacteria-Laden Water: a Review
    Kayla Piezer, Lei Li, Youchul Jeon, Anusha Kadudula, Youngwoo Seo
    Process Safety and Environmental Protection.2021; 148: 400.     CrossRef
  • LC and NMR Studies for Identification and Characterization of Degradation Byproducts of Olmesartan Acid, Elucidation of Their Degradation Pathway and Ecotoxicity Assessment
    Giovanni Luongo, Antonietta Siciliano, Giovanni Libralato, Sara Serafini, Lorenzo Saviano, Lucio Previtera, Giovanni Di Fabio, Armando Zarrelli
    Molecules.2021; 26(6): 1769.     CrossRef
  • Quantifying the Human Health Benefits of Using Satellite Information to Detect Cyanobacterial Harmful Algal Blooms and Manage Recreational Advisories in U.S. Lakes
    Signe Stroming, Molly Robertson, Bethany Mabee, Yusuke Kuwayama, Blake Schaeffer
    GeoHealth.2020;[Epub]     CrossRef
  • Synthesis of new tetronamides displaying inhibitory activity against bloom‐forming cyanobacteria
    Jaime AM Acosta, Milandip Karak, Luiz CA Barbosa, John Boukouvalas, Andrea Straforini, Giuseppe Forlani
    Pest Management Science.2020; 76(2): 779.     CrossRef
  • Analysis of Covalently Bound Microcystins in Sediments and Clam Tissue in the Sacramento–San Joaquin River Delta, California, USA
    Melissa Bolotaolo, Tomofumi Kurobe, Birgit Puschner, Bruce G Hammock, Matt J. Hengel, Sarah Lesmeister, Swee J. Teh
    Toxins.2020; 12(3): 178.     CrossRef
  • Concise Synthesis of (+)‐[13C4]‐Anatoxin‐a by Dynamic Kinetic Resolution of a Cyclic Iminium Ion
    Jacob J. Lacharity, Artur K. Mailyan, Karen Y. Chen, Armen Zakarian
    Angewandte Chemie.2020; 132(28): 11460.     CrossRef
  • Enhanced resistance of co-existing toxigenic and non-toxigenic Microcystis aeruginosa to pyrogallol compared with monostrains
    Yunni Gao, Jing Lu, Philip T. Orr, Ann Chuang, Hannah M. Franklin, Michele A. Burford
    Toxicon.2020; 176: 47.     CrossRef
  • Drinking water treatment residuals from cyanobacteria bloom-affected areas: Investigation of potential impact on agricultural land application
    Yuehan Ai, Seungjun Lee, Jiyoung Lee
    Science of The Total Environment.2020; 706: 135756.     CrossRef
  • Relationship between cyanobacterial bloom impacted drinking water sources and hepatocellular carcinoma incidence rates
    Tyler Gorham, Elisabeth Dowling Root, Yuanyuan Jia, C.K. Shum, Jiyoung Lee
    Harmful Algae.2020; 95: 101801.     CrossRef
  • Microcystis Bloom in an Urban Lake after River Water Diversion—A Case Study
    Xiaoyan Chen, Dong Bai, Chunlei Song, Yiyong Zhou, Xiuyun Cao
    Water.2020; 12(6): 1811.     CrossRef
  • Cyanobacterial blooms modify food web structure and interactions in western Lake Erie
    Ruth D. Briland, Joshua P. Stone, Manjunath Manubolu, Jiyoung Lee, Stuart A. Ludsin
    Harmful Algae.2020; 92: 101586.     CrossRef
  • Evaluation of alum-based water treatment residuals used to adsorb reactive phosphorus
    George Carleton, Teresa J. Cutright
    Water Science and Engineering.2020; 13(3): 181.     CrossRef
  • Exposure to microcystin among coastal residents during a cyanobacteria bloom in Florida
    Adam M. Schaefer, Luke Yrastorza, Nicole Stockley, Kathi Harvey, Nancy Harris, Robert Grady, James Sullivan, Malcolm McFarland, John S. Reif
    Harmful Algae.2020; 92: 101769.     CrossRef
  • Suppression of water-bloom cyanobacterium Microcystis aeruginosa by algaecide hydrogen peroxide maximized through programmed cell death
    Tingru Zhou, Huansheng Cao, Jie Zheng, Fei Teng, Xuejian Wang, Kai Lou, Xihui Zhang, Yi Tao
    Journal of Hazardous Materials.2020; 393: 122394.     CrossRef
  • Identifying the Influence of Land Cover and Human Population on Chlorophyll a Concentrations Using a Pseudo-Watershed Analytical Framework
    Luke Moslenko, Kevin Blagrave, Alessandro Filazzola, Arnab Shuvo, Sapna Sharma
    Water.2020; 12(11): 3215.     CrossRef
  • Impact of Hydrogen Peroxide and Copper Sulfate on the Delayed Release of Microcystin
    Arash Zamyadi, Katherine E. Greenstein, Caitlin M. Glover, Craig Adams, Erik Rosenfeldt, Eric C. Wert
    Water.2020; 12(4): 1105.     CrossRef
  • Concise Synthesis of (+)‐[13C4]‐Anatoxin‐a by Dynamic Kinetic Resolution of a Cyclic Iminium Ion
    Jacob J. Lacharity, Artur K. Mailyan, Karen Y. Chen, Armen Zakarian
    Angewandte Chemie International Edition.2020; 59(28): 11364.     CrossRef
  • Harnessing the biocatalytic potential of iron- and α-ketoglutarate-dependent dioxygenases in natural product total synthesis
    Christian R. Zwick, Hans Renata
    Natural Product Reports.2020; 37(8): 1065.     CrossRef
  • Environmental factors controlling phytoplankton dynamics in a large floodplain river with emphasis on cyanobacteria
    Shawn M. Giblin, Gretchen A. Gerrish
    River Research and Applications.2020; 36(7): 1137.     CrossRef
  • Identification and enumeration of cyanobacteria species using a deep neural network
    Sang-Soo Baek, JongCheol Pyo, Yakov Pachepsky, Yongeun Park, Mayzonee Ligaray, Chi-Yong Ahn, Young-Hyo Kim, Jong Ahn Chun, Kyung Hwa Cho
    Ecological Indicators.2020; 115: 106395.     CrossRef
  • Monitoring cyanobacteria occurrence in freshwater reservoirs using semi-analytical algorithms and orbital remote sensing
    Henrique Dantas Borges, Rejane Ennes Cicerelli, Tati de Almeida, Henrique L. Roig, Diogo Olivetti
    Marine and Freshwater Research.2020; 71(5): 569.     CrossRef
  • Microcystis toxin-mediated tumor promotion and toxicity lead to shifts in mouse gut microbiome
    Jiyoung Lee, Seungjun Lee, Alba Mayta, Igor Mrdjen, Christopher Weghorst, Thomas Knobloch
    Ecotoxicology and Environmental Safety.2020; 206: 111204.     CrossRef
  • Effect of Zinc on Microcystis aeruginosa UTEX LB 2385 and Its Toxin Production
    Jose L. Perez, Tinchun Chu
    Toxins.2020; 12(2): 92.     CrossRef
  • Ecogenomics of the Marine Benthic Filamentous Cyanobacterium Adonisia
    Juline M. Walter, Felipe H. Coutinho, Luciana Leomil, Paulo I. Hargreaves, Mariana E. Campeão, Verônica V. Vieira, Beatriz S. Silva, Giovana O. Fistarol, Paulo S. Salomon, Tomoo Sawabe, Sayaka Mino, Masashi Hosokawa, Hideaki Miyashita, Fumito Maruyama, Ma
    Microbial Ecology.2020; 80(2): 249.     CrossRef
  • Analysis of multiclass cyanotoxins (microcystins, anabaenopeptins, cylindrospermopsin and anatoxins) in lake waters using on-line SPE liquid chromatography high-resolution Orbitrap mass spectrometry
    Audrey Roy-Lachapelle, Sung Vo Duy, Gabriel Munoz, Quoc Tuc Dinh, Emmanuelle Bahl, Dana F. Simon, Sébastien Sauvé
    Analytical Methods.2019; 11(41): 5289.     CrossRef
  • Design, synthesis and algicides activities of thiourea derivatives as the novel scaffold aldolase inhibitors
    Shan Xiao, Lin Wei, Zongqin Hong, Li Rao, Yanliang Ren, Jian Wan, Lingling Feng
    Bioorganic & Medicinal Chemistry.2019; 27(5): 805.     CrossRef
  • Freshwater Supply to Metropolitan Shanghai: Issues of Quality from Source to Consumers
    Maotian Li, Jing Chen, Brian Finlayson, Zhongyuan Chen, Michael Webber, Jon Barnett, Mark Wang
    Water.2019; 11(10): 2176.     CrossRef
  • Harmful algal blooms and liver diseases: focusing on the areas near the four major rivers in South Korea
    Seungjun Lee, Jinnam Kim, Boseung Choi, Gijung Kim, Jiyoung Lee
    Journal of Environmental Science and Health, Part C.2019; 37(4): 356.     CrossRef
  • Characterization of Cyanophages in Lake Erie: Interaction Mechanisms and Structural Damage of Toxic Cyanobacteria
    Xuewen Jiang, Chanhee Ha, Seungjun Lee, Jinha Kwon, Hanna Cho, Tyler Gorham, Jiyoung Lee
    Toxins.2019; 11(8): 444.     CrossRef
  • Nutrients, eutrophication and harmful algal blooms along the freshwater to marine continuum
    Wayne A. Wurtsbaugh, Hans W. Paerl, Walter K. Dodds
    WIREs Water.2019;[Epub]     CrossRef
  • N-Halamine Derivatized Nanoparticles with Selective Cyanocidal Activity: Potential for Targeted Elimination of Harmful Cyanobacterial Blooms
    Giji Sadhasivam, Chen Gelber, Varda Zakin, Shlomo Margel, Orr H. Shapiro
    Environmental Science & Technology.2019; 53(15): 9160.     CrossRef
  • Dynamics of cyanobacteria blooms are linked to the hydrology of shallow Florida lakes and provide insight into possible impacts of climate change
    Karl E. Havens, Gaohua Ji, John R. Beaver, Rolland S. Fulton, Catherine E. Teacher
    Hydrobiologia.2019; 829(1): 43.     CrossRef
  • Microcystin-LR in peripheral circulation worsens the prognosis partly through oxidative stress in patients with hepatocellular carcinoma
    Feifei Lei, Xu Lei, Rugui Li, Huabing Tan
    Clinical and Experimental Medicine.2019; 19(2): 235.     CrossRef
  • Economic impact of harmful algal blooms on human health: a systematic review
    Christian R. C. Kouakou, Thomas G. Poder
    Journal of Water and Health.2019; 17(4): 499.     CrossRef
  • Influence of land use on trophic state indexes in northeast Brazilian river basins
    Olandia Ferreira Lopes, Felizardo Adenilson Rocha, Lucas Farias de Sousa, Daniela Mariano Lopes da Silva, Andrique Figueiredo Amorim, Ronaldo Lima Gomes, André Luiz Sampaio da Silva Junior, Raildo Mota de Jesus
    Environmental Monitoring and Assessment.2019;[Epub]     CrossRef
  • Harmful algal bloom and associated health risks among users of Lake Victoria freshwater: Ukerewe Island, Tanzania
    Geofrey J. Mchau, Edna Makule, Revocatus Machunda, Yun Yun Gong, Martin Kimanya
    Journal of Water and Health.2019; 17(5): 826.     CrossRef
  • Oriented Functionalization of Magnetic Beads with in Vivo Biotinylated Nanobodies for Rapid MALDI-TOF MS Ultrasensitive Quantitation of Microcystins in Biological Samples
    Macarena Pírez-Schirmer, Beatriz M. Brena, Gualberto González-Sapienza
    Analytical Chemistry.2019; 91(15): 9925.     CrossRef
  • Alternate succession of aggregate-forming cyanobacterial genera correlated with their attached bacteria by co-pathways
    Cong-Min Zhu, Jun-Yi Zhang, Rui Guan, Lauren Hale, Ning Chen, Ming Li, Zu-Hong Lu, Qin-Yu Ge, Yun-Feng Yang, Ji-Zhong Zhou, Ting Chen
    Science of The Total Environment.2019; 688: 867.     CrossRef
  • Identifying mechanisms of environmental decision-making: How ideology and geographic proximity influence public support for managing agricultural runoff to curb harmful algal blooms
    Tian Guo, Erik C. Nisbet, Jay F. Martin
    Journal of Environmental Management.2019; 241: 264.     CrossRef
  • What determines the public’s support for water quality regulations to mitigate agricultural runoff?
    Tian Guo, Devin Gill, Thomas H. Johengen, Bradley L. Cardinale
    Environmental Science & Policy.2019; 101: 323.     CrossRef
  • Relating Urban Biodiversity to Human Health With the ‘Holobiont’ Concept
    Jacob G. Mills, Justin D. Brookes, Nicholas J. C. Gellie, Craig Liddicoat, Andrew J. Lowe, Harrison R. Sydnor, Torsten Thomas, Philip Weinstein, Laura S. Weyrich, Martin F. Breed
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Biochemical and morphological biomarkers of the liver damage in the Neotropical fish, Piaractus mesopotamicus, injected with crude extract of cyanobacterium Radiocystis fernandoi
    Driele Tavares, Marcelo Gustavo Paulino, Ana Paula Terezan, João Batista Fernandes, Alessandra Giani, Marisa Narciso Fernandes
    Environmental Science and Pollution Research.2018; 25(16): 15349.     CrossRef
  • Algal Blooms and Cyanotoxins in Jordan Lake, North Carolina
    Daniel Wiltsie, Astrid Schnetzer, Jason Green, Mark Vander Borgh, Elizabeth Fensin
    Toxins.2018; 10(2): 92.     CrossRef
  • Heterologous expression and characterization of a novel serine protease from Daphnia magna: A possible role in susceptibility to toxic cyanobacteria
    Jacqueline Lange, Fatih Demir, Pitter F. Huesgen, Ulrich Baumann, Eric von Elert, Christian Pichlo
    Aquatic Toxicology.2018; 205: 140.     CrossRef
  • High-Spatial Resolution Monitoring of Phycocyanin and Chlorophyll-a Using Airborne Hyperspectral Imagery
    Jong Cheol Pyo, Mayzonee Ligaray, Yong Sung Kwon, Myoung-Hwan Ahn, Kyunghyun Kim, Hyuk Lee, Taegu Kang, Seong Been Cho, Yongeun Park, Kyung Hwa Cho
    Remote Sensing.2018; 10(8): 1180.     CrossRef
  • Seasonal Changes in Cyanobacterial Diversity of a Temperate Freshwater Paldang Reservoir (Korea) Explored by using Pyrosequencing
    Thangavelu Boopathi, Hui Wang, Man-Duck Lee, Jang-Seu Ki
    Environmental Biology Research.2018; 36(3): 424.     CrossRef
  • Magnetic activated carbon@ iron oxide@manganese oxide composite as an adsorbent for preconcentration of microcystin –LR in surface water, tap water, water and wastewater
    Geneath Pertunia Mashile, Anele Mpupa, Mogolodi K. Dimpe, Philiswa N. Nomngongo
    Environmental Nanotechnology, Monitoring & Management.2018; 10: 199.     CrossRef
  • Further Understanding of Degradation Pathways of Microcystin-LR by an Indigenous Sphingopyxis sp. in Environmentally Relevant Pollution Concentrations
    Qin Ding, Kaiyan Liu, Kai Xu, Rongli Sun, Juan Zhang, Lihong Yin, Yuepu Pu
    Toxins.2018; 10(12): 536.     CrossRef
  • Solar Photocatalysis Using Fixed-Film TiO2 for Microcystins from Colonial Microcystis aeruginosa
    Ciera M. Kinley, Maas Hendrikse, Alyssa J. Calomeni, Tyler D. Geer, John H. Rodgers
    Water, Air, & Soil Pollution.2018;[Epub]     CrossRef
  • Bloom-forming cyanobacteria and cyanotoxins in Argentina: A growing health and environmental concern
    Anabella Aguilera, Signe Haakonsson, María Victoria Martin, Graciela L. Salerno, Ricardo O. Echenique
    Limnologica.2018; 69: 103.     CrossRef
  • Short Total Synthesis of [15N5]-Cylindrospermopsins from 15NH4Cl Enables Precise Quantification of Freshwater Cyanobacterial Contamination
    Artur K. Mailyan, Joanna L. Chen, Weiwei Li, Arturo A. Keller, Shawn M. Sternisha, Brian G. Miller, Armen Zakarian
    Journal of the American Chemical Society.2018; 140(18): 6027.     CrossRef
  • Restoration of Nature or Special Interests? A Political Economy Analysis of the Four Major Rivers Restoration Project in South Korea
    Hyojong Song, Michael J. Lynch
    Critical Criminology.2018; 26(2): 251.     CrossRef
  • The Effect of Organic Carbon Addition on the Community Structure and Kinetics of Microcystin-Degrading Bacterial Consortia
    Derek Manheim, Yuen-Ming Cheung, Sunny Jiang
    Water.2018; 10(11): 1523.     CrossRef
  • Fresh produce and their soils accumulate cyanotoxins from irrigation water: Implications for public health and food security
    Seungjun Lee, Xuewen Jiang, Manjunath Manubolu, Ken Riedl, Stuart A. Ludsin, Jay F. Martin, Jiyoung Lee
    Food Research International.2017; 102: 234.     CrossRef
  • Chlorophyll-A Prediction of Lakes with Different Water Quality Patterns in China Based on Hybrid Neural Networks
    Xue Li, Jian Sha, Zhong-Liang Wang
    Water.2017; 9(7): 524.     CrossRef
  • Is the future of large shallow lakes blue-green? Comparing the response of a catchment-lake model chain to climate predictions
    Fabien Cremona, Sirje Vilbaste, Raoul-Marie Couture, Peeter Nõges, Tiina Nõges
    Climatic Change.2017; 141(2): 347.     CrossRef
  • Disturbance‐mediated Cyanobacterial Harmful Algal Bloom (CHAB) formation in a small Ohio reservoir
    Nathan Ruhl, Nicole Sullivan
    Lakes & Reservoirs: Science, Policy and Management for Sustainable Use.2017; 22(2): 161.     CrossRef
  • Natural Abenquines and Their Synthetic Analogues Exert Algicidal Activity against Bloom-Forming Cyanobacteria
    Amalyn Nain-Perez, Luiz Cláudio Almeida Barbosa, Célia Regina Álvares Maltha, Giuseppe Forlani
    Journal of Natural Products.2017; 80(4): 813.     CrossRef
  • Sustainable Methods for Decontamination of Microcystin in Water Using Cold Plasma and UV with Reusable TiO2 Nanoparticle Coating
    Xuewen Jiang, Seungjun Lee, Chulkyoon Mok, Jiyoung Lee
    International Journal of Environmental Research and Public Health.2017; 14(5): 480.     CrossRef
  • Cyanobacterial Toxins in Freshwater and Food: Important Sources of Exposure to Humans
    Jiyoung Lee, Seungjun Lee, Xuewen Jiang
    Annual Review of Food Science and Technology.2017; 8(1): 281.     CrossRef
  • Spatiotemporal variability and environmental factors of harmful algal blooms (HABs) over western Lake Erie
    Di Tian, Gengxin Xie, Jing Tian, Kuo-Hsin Tseng, C. K. Shum, Jiyoung Lee, Song Liang, Lucas J. Stal
    PLOS ONE.2017; 12(6): e0179622.     CrossRef
  • Host-genotype dependent gut microbiota drives zooplankton tolerance to toxic cyanobacteria
    Emilie Macke, Martijn Callens, Luc De Meester, Ellen Decaestecker
    Nature Communications.2017;[Epub]     CrossRef
  • A perspective of chemical treatment for cyanobacteria control toward sustainable freshwater development
    Jae-Hoon Huh, Ji-Whan Ahn
    Environmental Engineering Research.2017; 22(1): 1.     CrossRef
  • Alterations in transcription and protein expressions of HCC-related genes in HepG2 cells caused by microcystin-LR
    Xiaoyu Li, Xiangyang Zhang, Wenjie Xie, Chune Zhou, Yao Li, Xiuhua Zhang
    Toxicology in Vitro.2017; 40: 115.     CrossRef
  • Ten-year survey of cyanobacterial blooms in Ohio’s waterbodies using satellite remote sensing
    Tyler Gorham, Yuanyuan Jia, C.K. Shum, Jiyoung Lee
    Harmful Algae.2017; 66: 13.     CrossRef
  • Cyanobacterial Toxins of the Laurentian Great Lakes, Their Toxicological Effects, and Numerical Limits in Drinking Water
    Todd Miller, Lucas Beversdorf, Chelsea Weirich, Sarah Bartlett
    Marine Drugs.2017; 15(6): 160.     CrossRef
  • Como as cidades podem favorecer ou dificultar a promoção da saúde de seus moradores?
    Laís Fajersztajn, Mariana Veras, Paulo Hilário Nascimento Saldiva
    Estudos Avançados.2016; 30(86): 7.     CrossRef
  • A Rational Design, Synthesis, Biological Evaluation and Structure–Activity Relationship Study of Novel Inhibitors against Cyanobacterial Fructose-1,6-bisphosphate Aldolase
    Xinya Han, Xiuyun Zhu, Shuaihua Zhu, Lin Wei, Zongqin Hong, Li Guo, Haifeng Chen, Bo Chi, Yan Liu, Lingling Feng, Yanliang Ren, Jian Wan
    Journal of Chemical Information and Modeling.2016; 56(1): 73.     CrossRef
  • Understanding the key ecological traits of cyanobacteria as a basis for their management and control in changing lakes
    Evanthia Mantzouki, Petra M. Visser, Myriam Bormans, Bas W. Ibelings
    Aquatic Ecology.2016; 50(3): 333.     CrossRef
  • Health impacts from cyanobacteria harmful algae blooms: Implications for the North American Great Lakes
    Wayne W. Carmichael, Gregory L. Boyer
    Harmful Algae.2016; 54: 194.     CrossRef
  • Hyperspectral remote sensing of cyanobacterial pigments as indicators of the iron nutritional status of cyanobacteria-dominant algal blooms in eutrophic lakes
    Guangyu Chi, Jian Ma, Yi Shi, Xin Chen
    Ecological Indicators.2016; 71: 609.     CrossRef
  • Turbulence increases the risk of microcystin exposure in a eutrophic lake (Lake Taihu) during cyanobacterial bloom periods
    Jian Zhou, Boqiang Qin, Xiaoxia Han, Lin Zhu
    Harmful Algae.2016; 55: 213.     CrossRef
  • Toxic cyanobacteria and drinking water: Impacts, detection, and treatment
    Xuexiang He, Yen-Ling Liu, Amanda Conklin, Judy Westrick, Linda K. Weavers, Dionysios D. Dionysiou, John J. Lenhart, Paula J. Mouser, David Szlag, Harold W. Walker
    Harmful Algae.2016; 54: 174.     CrossRef
  • Anticancer compounds from cyanobacterium Lyngbya species: a review
    Shasank S. Swain, Rabindra N. Padhy, Pawan K. Singh
    Antonie van Leeuwenhoek.2015; 108(2): 223.     CrossRef
  • Cyanobacteria blooms and non-alcoholic liver disease: evidence from a county level ecological study in the United States
    Feng Zhang, Jiyoung Lee, Song Liang, CK Shum
    Environmental Health.2015;[Epub]     CrossRef
  • Effects of intermediate metabolite carboxylic acids of TCA cycle on Microcystis with overproduction of phycocyanin
    Shijie Bai, Jingcheng Dai, Ming Xia, Jing Ruan, Hehong Wei, Dianzhen Yu, Ronghui Li, Hongmei Jing, Chunyuan Tian, Lirong Song, Dongru Qiu
    Environmental Science and Pollution Research.2015; 22(7): 5531.     CrossRef
  • Detection of the cyanobacterial toxin, microcystin-LR, using a novel recombinant antibody-based optical-planar waveguide platform
    Caroline Murphy, Edwina Stack, Svetlana Krivelo, Daniel A. McPartlin, Barry Byrne, Charles Greef, Michael J. Lochhead, Greg Husar, Shauna Devlin, Christopher T. Elliott, Richard J. O’Kennedy
    Biosensors and Bioelectronics.2015; 67: 708.     CrossRef
  • Human Health-Related Ecosystem Services of Avian-Dense Coastal Wetlands Adjacent to a Western Lake Erie Swimming Beach
    Chris L. Rea, Michael S. Bisesi, William Mitsch, Rebecca Andridge, Jiyoung Lee
    EcoHealth.2015; 12(1): 77.     CrossRef
  • Impact of Environmental Factors on the Regulation of Cyanotoxin Production
    Thangavelu Boopathi, Jang-Seu Ki
    Toxins.2014; 6(7): 1951.     CrossRef
  • Neurotoxic action of microcystin-LR is reflected in the transcriptional stress response of Caenorhabditis elegans
    Nadine Saul, Shumon Chakrabarti, Stephen R. Stürzenbaum, Ralph Menzel, Christian E.W. Steinberg
    Chemico-Biological Interactions.2014; 223: 51.     CrossRef
  • Female zebrafish (Danio rerio) are more vulnerable than males to microcystin-LR exposure, without exhibiting estrogenic effects
    Qin Qiao, Wanjing Liu, Kang Wu, Ting Song, Jun Hu, Xiao Huang, Jing Wen, Liang Chen, Xuezhen Zhang
    Aquatic Toxicology.2013; 142-143: 272.     CrossRef
REVIEW] Interaction of Candida albicans with host cells: virulence factors, host defense, escape strategies, and the microbiota
Sarah Höfs , Selene Mogavero , Bernhard Hube
J. Microbiol. 2016;54(3):149-169.   Published online February 27, 2016
DOI: https://doi.org/10.1007/s12275-016-5514-0
  • 858 View
  • 0 Download
  • 163 Crossref
AbstractAbstract PDF
The interaction between Candida albicans and its host cells is characterized by a complex interplay between the expression of fungal virulence factors, which results in adherence, invasion and cell damage, and the host immune system, which responds by secreting proinflammatory cytokines, activating antimicrobial activities and killing the fungal pathogen. In this review we describe this interplay by taking a closer look at how C. albicans pathogenicity is induced and executed, how the host responds in order to prevent and clear an infection, and which mechanisms C. albicans has evolved to bypass these immune responses to avoid clearance. Furthermore, we review studies that show how the presence of other microorganisms affects this interplay.

Citations

Citations to this article as recorded by  
  • Anti-fungal peptides: an emerging category with enthralling therapeutic prospects in the treatment of candidiasis
    Jyoti Sankar Prusty, Ashwini Kumar, Awanish Kumar
    Critical Reviews in Microbiology.2025; 51(5): 755.     CrossRef
  • Blocking the shikimate pathway amplifies the impact of carvacrol on biofilm formation in Candida albicans
    Ali Molaeitabari, Tanya E. S. Dahms, Renato Kovacs, Alireza Khodavandi
    Microbiology Spectrum.2025;[Epub]     CrossRef
  • Vaginal Transcriptional Signatures of the Neutrophil‐Driven Immune Response Correlate With Clinical Severity During Recurrent Vulvovaginal Candidiasis
    Tyra Hasselrot, Cathrin Alvendal, Sara Hunt, Mathias Franzén Boger, Vilde Kaldhusdal, Anastasios Damdimopoulos, Ina Schuppe‐Koistinen, Gabriella Edfeldt, Nina Bohm‐Starke, Kristina Broliden
    American Journal of Reproductive Immunology.2025;[Epub]     CrossRef
  • Vulvovaginal candidiasis: pathogenesis, virulence factors, diagnosis, and therapeutic approach
    Néstor Casillas-Vega
    Reviews and Research in Medical Microbiology.2025;[Epub]     CrossRef
  • Antimicrobial Peptides Act-6 and Act 8-20 Derived from Scarabaeidae Cecropins Exhibit Differential Antifungal Activity
    Melissa Rodríguez, Lily J. Toro, Carolina Firacative, Beatriz L. Gómez, Bruno Rivas-Santiago, David Andreu, Jhon C. Castaño, German A. Téllez, Julián E. Muñoz
    Journal of Fungi.2025; 11(7): 519.     CrossRef
  • Early Human Neutrophil Response to Different Morphotypes of Candida albicans Compared to Bacterial Pathogens
    Gizem Babuccu, Özgür Albayrak, Füsun Can, Özlem Doğan
    APMIS.2025;[Epub]     CrossRef
  • The Prevalence and Drug Susceptibility of Candida Species and an Analysis of Risk Factors for Oral Candidiasis—A Retrospective Study
    Marcin Tkaczyk, Anna Kuśka-Kielbratowska, Jakub Fiegler-Rudol, Wojciech Niemczyk, Anna Mertas, Dariusz Skaba, Rafał Wiench
    Antibiotics.2025; 14(9): 876.     CrossRef
  • Involvement of mitochondrial respiratory chains in virulence factors of Candida albicans
    Rabeay Y.A. Hassan, Mohamed Medhat Ali, Shuna Cui, Ursula Bilitewski
    Fungal Biology Reviews.2025; 54: 100448.     CrossRef
  • Virulence and Stress-Related Proteins Are Differentially Enriched and N-Terminally Acetylated in Extracellular Vesicles from Virulent Paracoccidioides brasiliensis
    Carla E. Octaviano-Azevedo, Karolina R. F. Beraldo, Natanael P. Leitão-Júnior, Cássia M. de Souza, Camila P. da Silva, Rita C. Sinigaglia, Erix A. Milán Garcés, Evandro L. Duarte, Alexandre K. Tashima, Maria A. Juliano, Rosana Puccia
    Journal of Fungi.2025; 11(10): 751.     CrossRef
  • The molecular mechanism of traditional Chinese medicine in the treatment of oropharyngeal candidiasis (OPC)
    Shiqi Wang, Hongchen Wang, Wenfan Wei, Tianming Wang
    Journal of Oral Microbiology.2025;[Epub]     CrossRef
  • Pathophysiological microenvironments in oral candidiasis
    Mette Rose Jørgensen
    APMIS.2024; 132(12): 956.     CrossRef
  • Review of Virulence Factors in Candida
    Mohammed Sami Farhan, Bilal Ahmed Abdullah, Ali Esam Mamdwooh, Rand Salwan Numan
    Journal for Research in Applied Sciences and Biotechnology.2024; 3(2): 75.     CrossRef
  • Multifunctional interaction of CihC/FbpC orthologs of relapsing fever spirochetes with host-derived proteins involved in adhesion, fibrinolysis, and complement evasion
    Ann-Sophie Damm, Flavia Reyer, Luisa Langhoff, Yi-Pin Lin, Franco Harald Falcone, Peter Kraiczy
    Frontiers in Immunology.2024;[Epub]     CrossRef
  • Cold Atmospheric Pressure Plasma May Prevent Oral Mucositis-Related Candidemia in Chemotherapy-Treated Rats
    Aline da Graça Sampaio, Noala Vicensoto Moreira Milhan, Fellype do Nascimento, Konstantin Georgiev Kostov, Cristiane Yumi Koga-Ito
    International Journal of Molecular Sciences.2024; 25(21): 11496.     CrossRef
  • Coptidis rhizoma extract alleviates oropharyngeal candidiasis by gC1qR-EGFR/ERK/c-fos axis-induced endocytosis of oral epithelial cells
    Mengyuan Bao, Qingru Bu, Min Pan, Ran Xu, Yujie Chen, Yue Yang, Changzhong Wang, Tianming Wang
    Journal of Ethnopharmacology.2024; 331: 118305.     CrossRef
  • Secretory inhibitor of lysozyme and biofilm formation of intestinal strains Candida in children with reactive arthritis
    O. V. Bukharin, N. B. Perunova, E. V. Ivanova, O. E. Chelpachenko, A. I. Khavkin
    Archives of Pediatrics and Pediatric Surgery.2024; 1(2): 5.     CrossRef
  • Structure-Based Optimization of Novel Sterol 24-C-Methyltransferase Inhibitors for the Treatment of Candida albicans Infections
    Xue Wang, Xueyang Jin, Fabao Zhao, Zejun Xu, Wenzhuo Tan, Jiaozhen Zhang, Yuliang Xu, Xiaoyi Luan, Min Fang, Zhiyu Xie, Wenqiang Chang, Hongxiang Lou
    Journal of Medicinal Chemistry.2024; 67(11): 9318.     CrossRef
  • Landscape of in situ cytokine expression, soluble C-type lectin receptors, and vitamin D in patients with recurrent vulvovaginal candidiasis
    Jeiser Marcelo Consuegra-Asprilla, Manuela Chaverra-Osorio, Brajhan Torres, Yuliana Cabrera-Chingal, Angelica Mancera-Mieles, Carolina Rodríguez-Echeverri, Beatriz L Gómez, Ángel González
    Medical Mycology.2024;[Epub]     CrossRef
  • Insight into Virulence and Mechanisms of Amphotericin B Resistance in the Candida haemulonii Complex
    Yuyan Huang, Yanyu Su, Xinfei Chen, Meng Xiao, Yingchun Xu
    Journal of Fungi.2024; 10(9): 615.     CrossRef
  • Comparative transcriptional analysis of Candida auris biofilms following farnesol and tyrosol treatment
    Ágnes Jakab, Fruzsina Kovács, Noémi Balla, Csaba Nagy-Köteles, Ágota Ragyák, Fruzsina Nagy, Andrew M. Borman, László Majoros, Renátó Kovács, Patricia Albuquerque
    Microbiology Spectrum.2024;[Epub]     CrossRef
  • A Review of the Relationship between Tumors of the Biliary System and Intestinal Microorganisms
    勇利 李
    Advances in Clinical Medicine.2024; 14(07): 833.     CrossRef
  • Bibliometric analysis and thematic review of Candida pathogenesis: Fundamental omics to applications as potential antifungal drugs and vaccines
    Si Jie Lim, Noor Dina Muhd Noor, Suriana Sabri, Mohd Shukuri Mohamad Ali, Abu Bakar Salleh, Siti Nurbaya Oslan
    Medical Mycology.2024;[Epub]     CrossRef
  • MIG1, TUP1 and NRG1 mediated yeast to hyphal morphogenesis inhibition in Candida albicans by ganciclovir
    Tanjila Gavandi, Shivani Patil, Sargun Basrani, Shivanand Yankanchi, Sayali Chougule, S. Mohan Karuppayil, Ashwini Jadhav
    Brazilian Journal of Microbiology.2024; 55(3): 2047.     CrossRef
  • The early transcriptional and post-transcriptional responses to fluconazole in sensitive and resistant Candida albicans
    Irene Stevens, Fitz Gerald Silao, Susanne Huch, Honglian Liu, Kicki Ryman, Adriana Carvajal-Jimenez, Per O. Ljungdahl, Vicent Pelechano
    Scientific Reports.2024;[Epub]     CrossRef
  • Oral Microbiome: A Review of Its Impact on Oral and Systemic Health
    John J. Rajasekaran, Hari Krishnan Krishnamurthy, Jophi Bosco, Vasanth Jayaraman, Karthik Krishna, Tianhao Wang, Kang Bei
    Microorganisms.2024; 12(9): 1797.     CrossRef
  • Cell pleomorphism and changes in the enzymatic profile of selected Candida albicans strains in interaction with Escherichia coli – pilot study
    Katarzyna Góralska, Szymon Lis, Ewa Brzeziańska-Lasota
    Journal of Medical Mycology.2024; 34(1): 101458.     CrossRef
  • Relationships between Secreted Aspartyl Proteinase 2 and General Control Nonderepressible 4 gene in the Candida albicans resistant to itraconazole under planktonic and biofilm conditions
    Wenli Feng, Jing Yang, Yan Ma, Luwen Zhang, Rong Yin, Zusha Qiao, Ying Ji, Yong’an Zhou
    Brazilian Journal of Microbiology.2023; 54(2): 619.     CrossRef
  • Epithelial responses and Candida albicans pathogenicity are enhanced in the presence of oral streptococci
    Loyse Martorano-Fernandes, Arella Cristina Muniz Brito, Elza Cristina Farias de Araújo, Leopoldina de Fátima Dantas de Almeida, Xiao-Qing Wei, David Wynne Williams, Yuri Wanderley Cavalcanti
    Brazilian Dental Journal.2023; 34(3): 73.     CrossRef
  • Antimicrobial Peptides: Avant-Garde Antifungal Agents to Fight against Medically Important Candida Species
    Gina P. Rodríguez-Castaño, Frank Rosenau, Ludger Ständker, Carolina Firacative
    Pharmaceutics.2023; 15(3): 789.     CrossRef
  • Cinnamaldehyde for the Treatment of Microbial Infections: Evidence Obtained from Experimental Models
    Cristiane Santos Silva e Silva Figueiredo, Patrícia Vieira de Oliveira, Larissa dos Reis Ferreira, Thallysson José Dourado de Sousa, Mayara de Santana do Nascimento, Julliana Ribeiro Alves dos Santos, Adrielle Zagmignan, Rodrigo Assunção de Holanda, Lívia
    Current Medicinal Chemistry.2023; 30(31): 3506.     CrossRef
  • Host Cell Geometry and Cytoskeletal Organization Governs Candida–Host Cell Interactions at the Nanoscale
    Easter Ndlovu, Lucas Malpartida, Taranum Sultana, Tanya E. S. Dahms, Etienne Dague
    ACS Applied Materials & Interfaces.2023; 15(44): 50789.     CrossRef
  • Reappraisal of intra-abdominal candidiasis: insights from peritoneal fluid analysis
    Emmanuel Novy, Mathieu Esposito, Julien Birckener, Adeline Germain, Marie-Reine Losser, Marie-Claire Machouart, Philippe Guerci
    Intensive Care Medicine Experimental.2023;[Epub]     CrossRef
  • Candida albicans resistance to hypochlorous acid
    Lois M. Douglas, Kyunghun Min, James B. Konopka, J. Andrew Alspaugh
    mBio.2023;[Epub]     CrossRef
  • TULA Proteins in Men, Mice, Hens, and Lice: Welcome to the Family
    Alexander Y. Tsygankov
    International Journal of Molecular Sciences.2023; 24(11): 9126.     CrossRef
  • Immunomodulatory Potential of Fungal Extracellular Vesicles: Insights for Therapeutic Applications
    Stefano Nenciarini, Duccio Cavalieri
    Biomolecules.2023; 13(10): 1487.     CrossRef
  • Healthy Diet and Lifestyle Improve the Gut Microbiota and Help Combat Fungal Infection
    Samir Jawhara
    Microorganisms.2023; 11(6): 1556.     CrossRef
  • Hypovitaminosis D, objective oral dryness, and fungal hyphae as three precipitating factors for a subset of secondary burning mouth syndrome
    Yang Gu, Samuel Baldwin, Carl Canning
    Heliyon.2023; 9(9): e19954.     CrossRef
  • Advancing Vaccine Strategies against Candida Infections: Exploring New Frontiers
    Gurpreet Kaur, Sonam Chawla, Piyush Kumar, Ritu Singh
    Vaccines.2023; 11(11): 1658.     CrossRef
  • Adherence of Candida Species Isolated from Patients with Head and Neck Cancer Presented for Radiation Therapy and its Correlation with Hemogram
    Neethu Babu, Chitralekha Saikumar, C. Jomon Raphael
    Journal of Pure and Applied Microbiology.2023; 17(4): 2415.     CrossRef
  • Candida albicans the main opportunistic pathogenic fungus in humans
    Ignacio Uriel Macias-Paz, Salvador Pérez-Hernández, Alejandra Tavera-Tapia, Juan Pedro Luna-Arias, José Eugenio Guerra-Cárdenas, Elizabeth Reyna-Beltrán
    Revista Argentina de Microbiología.2023; 55(2): 189.     CrossRef
  • Bioprospecting the Skin Microbiome: Advances in Therapeutics and Personal Care Products
    Keir Nicholas-Haizelden, Barry Murphy, Michael Hoptroff, Malcolm J. Horsburgh
    Microorganisms.2023; 11(8): 1899.     CrossRef
  • Aspects related to biofilm production and antifungal susceptibility of clinically relevant yeasts of the genusTrichosporon
    Bruna Rossini Lara, Bruno Braidotti de Camargo, Claudete Rodrigues Paula, Gabrielle Pires de Morais Monari, Hans Garcia Garces, Mariana Volpe Arnoni, Mônica Silveira, Viviane Mazo Fávero Gimenes, Diniz Pereira Leite Junior, Lucas Xavier Bonfietti, Lidiane
    Medical Mycology.2023;[Epub]     CrossRef
  • Candida albicans can foster gut dysbiosis and systemic inflammation during HIV infection
    Silvere D Zaongo, Jing Ouyang, Stéphane Isnard, Xin Zhou, Vijay Harypursat, Hongjuan Cui, Jean-Pierre Routy, Yaokai Chen
    Gut Microbes.2023;[Epub]     CrossRef
  • Design, 2D Qsar Studies, Molecular Docking, and Synthesis of Novel Triazole Derivatives intended as an Antifungal Agents
    K. Yuvarani, N. Ramalakshmi, S. Arunkumar
    Russian Journal of Bioorganic Chemistry.2023; 49(S1): S202.     CrossRef
  • Is Candida albicans a contributor to cancer? A critical review based on the current evidence
    Xu Wang, Wenqing Zhang, Wenjie Wu, Shuangshuang Wu, Andrew Young, Zhimin Yan
    Microbiological Research.2023; 272: 127370.     CrossRef
  • High molecular weight chitosan oligosaccharide exhibited antifungal activity by misleading cell wall organization via targeting PHR transglucosidases
    Ruilian Li, Limeng Zhu, Dongdong Liu, Wenjing Wang, Chen Zhang, Siming Jiao, Jinhua Wei, Lishi Ren, Yuchen Zhang, Xun Gou, Xianghua Yuan, Yuguang Du, Zhuo A. Wang
    Carbohydrate Polymers.2022; 285: 119253.     CrossRef
  • Small, Cationic Antifungal Proteins from Filamentous Fungi Inhibit Candida albicans Growth in 3D Skin Infection Models
    Jeanett Holzknecht, Sandrine Dubrac, Sarah Hedtrich, László Galgóczy, Florentine Marx, Gustavo H. Goldman
    Microbiology Spectrum.2022;[Epub]     CrossRef
  • Berberine Inhibits the Adhesion of Candida albicans to Vaginal Epithelial Cells
    Ting Zhao, Kang Zhang, Gaoxiang Shi, Kelong Ma, Benfan Wang, Jing Shao, Tianming Wang, Changzhong Wang
    Frontiers in Pharmacology.2022;[Epub]     CrossRef
  • Trans-cellular tunnels induced by the fungal pathogen Candida albicans facilitate invasion through successive epithelial cells without host damage
    Joy Lachat, Alice Pascault, Delphine Thibaut, Rémi Le Borgne, Jean-Marc Verbavatz, Allon Weiner
    Nature Communications.2022;[Epub]     CrossRef
  • The Cytotoxic and Inhibitory Effects of Plant Derivatives on Candida albicans Biofilms: A Scoping Review
    Manuela Loaiza-Oliva, Laura Arias-Durango, María Cecilia Martínez-Pabón
    Molecules.2022; 28(1): 130.     CrossRef
  • Physiological and transcriptional profiling of surfactin exerted antifungal effect against Candida albicans
    Ágnes Jakab, Fruzsina Kovács, Noémi Balla, Zoltán Tóth, Ágota Ragyák, Zsófi Sajtos, Kinga Csillag, Csaba Nagy-Köteles, Dániel Nemes, Ildikó Bácskay, István Pócsi, László Majoros, Ákos T. Kovács, Renátó Kovács
    Biomedicine & Pharmacotherapy.2022; 152: 113220.     CrossRef
  • Genetic Screening of Candida albicans Inactivation Mutants Identifies New Genes Involved in Macrophage-Fungal Cell Interactions
    Pablo Godoy, Peter John Darlington, Malcolm Whiteway
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Does Dementia Have a Microbial Cause?
    Remi L. Landry, Monica E. Embers
    NeuroSci.2022; 3(2): 262.     CrossRef
  • Focused library of phenyl-fused macrocyclic amidinoureas as antifungal agents
    Lorenzo J. I. Balestri, Ilaria D’Agostino, Enrico Rango, Chiara Vagaggini, Rosalba Marchitiello, Melinda Mariotti, Alexandru Casian, Davide Deodato, Giuseppina I. Truglio, Francesco Orofino, Maurizio Sanguinetti, Francesca Bugli, Lorenzo Botta, Elena Drea
    Molecular Diversity.2022; 26(6): 3399.     CrossRef
  • Prevalence of vulvo-vaginal candidiasis among women attending clinics in selected Hospitals in Oyo State, Southwest, Nigeria
    Oladimeji Idowu Michael, Ifeoluwa Makinde Gabriel, Oluyemi Oluranti Olayinka, Ayodeji Adebayo Matthew, Ayodele Adekunle Olajide
    Journal of Public Health and Epidemiology.2022; 14(1): 45.     CrossRef
  • Flavonoid-Rich Fractions of Bauhinia holophylla Leaves Inhibit Candida albicans Biofilm Formation and Hyphae Growth
    Sara Thamires Dias da Fonseca, Thaiz Rodrigues Teixeira, Jaqueline Maria Siqueira Ferreira, Luciana Alves Rodrigues dos Santos Lima, Walter Luyten, Ana Hortência Fonsêca Castro
    Plants.2022; 11(14): 1796.     CrossRef
  • The antifungal and antibiofilm activity of Cymbopogon nardus essential oil and citronellal on clinical strains of Candida albicans
    Leonardo Antunes Trindade, Laísa Vilar Cordeiro, Daniele de Figuerêdo Silva, Pedro Thiago Ramalho Figueiredo, Marcela Lins Cavalcanti de Pontes, Edeltrudes de Oliveira Lima, Alessandra de Albuquerque Tavares Carvalho
    Brazilian Journal of Microbiology.2022; 53(3): 1231.     CrossRef
  • A possible mechanism of farnesol tolerance in C. albicans biofilms implemented by activating the PKC signalling pathway and stabilizing ROS levels
    Shengyan Chen, Zheng Xu, Siqi Liu, Wei Duan, Yun Huang, Xin Wei
    Journal of Medical Microbiology .2022;[Epub]     CrossRef
  • Effects of Boric Acid Gel on Vaginal Candida albicans Infections and the Local Immune System in Mice
    Xiaoyu Guo, Tingting Jing, Xiaojing Li, Zhao Liu, Yongxue Chen, Yiquan Li, Yanyan Xu, Hongqi Gao
    Frontiers in Immunology.2022;[Epub]     CrossRef
  • Salivary Histatin 5 Level in Women with Vaginal Candidiasis
    İrem Şenyuva, Cansu Koca, Funda Karabag Çoban, Özgür Tarhan, Andrea Scribante
    International Journal of Clinical Practice.2022;[Epub]     CrossRef
  • Extracellular Vesicles Regulate Biofilm Formation and Yeast-to-Hypha Differentiation in Candida albicans
    Leandro Honorato, Joana Feital Demetrio de Araujo, Cameron C. Ellis, Alicia Corbellini Piffer, Yan Pereira, Susana Frases, Glauber Ribeiro de Sousa Araújo, Bruno Pontes, Maria Tays Mendes, Marcos Dias Pereira, Allan J. Guimarães, Natalia Martins da Silva,
    mBio.2022;[Epub]     CrossRef
  • Ceragenin CSA-44 as a Means to Control the Formation of the Biofilm on the Surface of Tooth and Composite Fillings
    Joanna Tokajuk, Piotr Deptuła, Sylwia J Chmielewska, Karol Skłodowski, Żaneta A Mierzejewska, Małgorzata Grądzka-Dahlke, Adam Tołstoj, Tamara Daniluk, Paulina Paprocka, Paul B Savage, Robert Bucki
    Pathogens.2022; 11(5): 491.     CrossRef
  • Mass Spectrometry-Based Proteomic and Immunoproteomic Analyses of the Candida albicans Hyphal Secretome Reveal Diagnostic Biomarker Candidates for Invasive Candidiasis
    Catarina Vaz, Aida Pitarch, Emilia Gómez-Molero, Ahinara Amador-García, Michael Weig, Oliver Bader, Lucía Monteoliva, Concha Gil
    Journal of Fungi.2021; 7(7): 501.     CrossRef
  • Antimicrobial Peptides Human Beta-Defensin-2 and -3 Protect the Gut During Candida albicans Infections Enhancing the Intestinal Barrier Integrity: In Vitro Study
    Alessandra Fusco, Vittoria Savio, Maria Donniacuo, Brunella Perfetto, Giovanna Donnarumma
    Frontiers in Cellular and Infection Microbiology.2021;[Epub]     CrossRef
  • The effect of iron dextran injection on oral candidiasis symptoms in experimental iron deficiency anemia of laboratory rats
    Saad Jaafar Rashak, Sanaa Jameel Thamer, Abdullah H. Alsaadoon, Maha Khalil Ibrahim
    Asia Pacific Journal of Molecular Biology and Biotechnology.2021; : 96.     CrossRef
  • It Takes Two to Tango: How a Dysregulation of the Innate Immunity, Coupled With Candida Virulence, Triggers VVC Onset
    Andrea Ardizzoni, Robert T. Wheeler, Eva Pericolini
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • A Candida parapsilosis Overexpression Collection Reveals Genes Required for Pathogenesis
    Sára E. Pál, Renáta Tóth, Joshua D. Nosanchuk, Csaba Vágvölgyi, Tibor Németh, Attila Gácser
    Journal of Fungi.2021; 7(2): 97.     CrossRef
  • Proteinous Components of Neutrophil Extracellular Traps Are Arrested by the Cell Wall Proteins of Candida albicans during Fungal Infection, and Can Be Used in the Host Invasion
    Justyna Karkowska-Kuleta, Magdalena Smolarz, Karolina Seweryn-Ozog, Dorota Satala, Marcin Zawrotniak, Ewelina Wronowska, Oliwia Bochenska, Andrzej Kozik, Angela H. Nobbs, Mariusz Gogol, Maria Rapala-Kozik
    Cells.2021; 10(10): 2736.     CrossRef
  • Ellagic Acid–Cyclodextrin Complexes for the Treatment of Oral Candidiasis
    Aline da Graça Sampaio, Aline Vidal Lacerda Gontijo, Gabriela de Morais Gouvêa Lima, Maria Alcionéia Carvalho de Oliveira, Laura Soares Souto Lepesqueur, Cristiane Yumi Koga-Ito
    Molecules.2021; 26(2): 505.     CrossRef
  • Analysis of biofilm formation bySporothrix schenckii
    Rocío Sánchez-Herrera, Lérida Liss Flores-Villavicencio, Juan Luis Pichardo-Molina, José Pedro Castruita-Domínguez, Xochilt Aparicio-Fernández, Myrna Sabanero López, Julio Cesar Villagómez-Castro
    Medical Mycology.2021; 59(1): 31.     CrossRef
  • Crosstalk between the oral microbiota, mucosal immunity, and the epithelial barrier regulates oral mucosal disease pathogenesis
    Dongjia Lin, Lisa Yang, Liling Wen, Huanzi Lu, Qianming Chen, Zhi Wang
    Mucosal Immunology.2021; 14(6): 1247.     CrossRef
  • Modulation of Immune Responses by Particle Size and Shape
    Maksim V. Baranov, Manoj Kumar, Stefano Sacanna, Shashi Thutupalli, Geert van den Bogaart
    Frontiers in Immunology.2021;[Epub]     CrossRef
  • Transcriptional Profiling of the Candida auris Response to Exogenous Farnesol Exposure
    Ágnes Jakab, Noémi Balla, Ágota Ragyák, Fruzsina Nagy, Fruzsina Kovács, Zsófi Sajtos, Zoltán Tóth, Andrew M. Borman, István Pócsi, Edina Baranyai, László Majoros, Renátó Kovács, Aaron P. Mitchell
    mSphere.2021;[Epub]     CrossRef
  • Virulence related traits in yeast species associated with food; Debaryomyces hansenii, Kluyveromyces marxianus, and Wickerhamomyces anomalus
    Laura Peréz-Través, Rosa de Llanos, Allen Flockhart, Lydia García-Domingo, Marizeth Groenewald, Roberto Pérez-Torrado, Amparo Querol
    Food Control.2021; 124: 107901.     CrossRef
  • Yeast-Host Interactions: Anadenanthera colubrina Modulates Virulence Factors of C. albicans and Inflammatory Response In Vitro
    Carolina Medeiros de Almeida Maia, Silvana Pasetto, Cassiano Francisco Weege Nonaka, Edja Maria Melo de Brito Costa, Ramiro Mendonça Murata
    Frontiers in Pharmacology.2021;[Epub]     CrossRef
  • Candida albicans—The Virulence Factors and Clinical Manifestations of Infection
    Jasminka Talapko, Martina Juzbašić, Tatjana Matijević, Emina Pustijanac, Sanja Bekić, Ivan Kotris, Ivana Škrlec
    Journal of Fungi.2021; 7(2): 79.     CrossRef
  • Histatin 5 Metallopeptides and Their Potential against Candida albicans Pathogenicity and Drug Resistance
    Gabriela Vieira Silva Zolin, Fauller Henrique da Fonseca, Carolina Reis Zambom, Saulo Santesso Garrido
    Biomolecules.2021; 11(8): 1209.     CrossRef
  • Interaction between Borrelia miyamotoi variable major proteins Vlp15/16 and Vlp18 with plasminogen and complement
    Frederik L. Schmidt, Valerie Sürth, Tim K. Berg, Yi-Pin Lin, Joppe W. Hovius, Peter Kraiczy
    Scientific Reports.2021;[Epub]     CrossRef
  • Antibacterial and antifungal activities of encapsulated Au and Ag nanoparticles synthesized using Argemone mexicana L extract, against antibiotic-resistant bacteria and Candida albicans
    Diana Guadalupe Téllez-de-Jesús, N.S. Flores-Lopez, J.A. Cervantes-Chávez, A.R. Hernández-Martínez
    Surfaces and Interfaces.2021; 27: 101456.     CrossRef
  • Изучение распространенности и резистентности к антимикотикам грибов рода Candida при инфекционных заболеваниях верхних и нижних дыхательных путей
    N.I. Kovalenko, T.M. Zamazii, I.V. Novikova
    ACTUAL INFECTOLOGY.2021; 8(5-6): 25.     CrossRef
  • The Effects of Tormentic Acid and Extracts from Callistemon citrinus on Candida albicans and Candida tropicalis Growth and Inhibition of Ergosterol Biosynthesis in Candida albicans
    Chido Bvumbi, Godloves Fru Chi, Marc Y. Stevens, Molly Mombeshora, Stanley Mukanganyama, Ahmad Mansour
    The Scientific World Journal.2021; 2021: 1.     CrossRef
  • Loss of Arp1, a putative actin-related protein, triggers filamentous and invasive growth and impairs pathogenicity in Candida albicans
    Shuangyan Yao, Yuting Feng, Amjad Islam, Manjari Shrivastava, Hongcheng Gu, Yumeng Lu, Jiaqi Sheng, Malcolm Whiteway, Jinrong Feng
    Computational and Structural Biotechnology Journal.2020; 18: 4002.     CrossRef
  • Action mechanisms of probiotics onCandidaspp. and candidiasis prevention: an update
    F.C. Ribeiro, R.D. Rossoni, P.P. Barros, J.D. Santos, L.R.O. Fugisaki, M.P.V. Leão, J.C. Junqueira
    Journal of Applied Microbiology.2020; 129(2): 175.     CrossRef
  • The Whi2p-Psr1p/Psr2p complex regulates interference competition and expansion of cells with competitive advantage in yeast colonies
    Jana Maršíková, Martina Pavlíčková, Derek Wilkinson, Libuše Váchová, Otakar Hlaváček, Ladislava Hatáková, Zdena Palková
    Proceedings of the National Academy of Sciences.2020; 117(26): 15123.     CrossRef
  • Bio- and Nanotechnology as the Key for Clinical Application of Salivary Peptide Histatin: A Necessary Advance
    Carolina Reis Zambom, Fauller Henrique da Fonseca, Saulo Santesso Garrido
    Microorganisms.2020; 8(7): 1024.     CrossRef
  • High frequency of azole resistant Candida spp. colonization among presumptive multidrug resistant tuberculosis (MDR-TB) patients
    Surya Darma, Angga Ambara, Abu Tholib Aman, Luthvia Annisa, Nurrokhman, Titik Nuryastuti, Tri Wibawa, Selvakumar Subbian
    PLOS ONE.2020; 15(11): e0242542.     CrossRef
  • Resensitization of Fluconazole-Resistant Urinary Candida spp. Isolates by Amikacin through Downregulation of Efflux Pump Genes
    EVA A. EDWARD, NELLY M. MOHAMED, AZZA S. ZAKARIA
    Polish Journal of Microbiology.2020; 69(1): 73.     CrossRef
  • Association of IL-17 and IL-23 Gene Variants with Plasma Levels and Risk of Vulvovaginal Candidiasis in a Chinese Han Population


    Wei Li, Wenyin Shi, Yujun Yin, Juan Chen, Lanlan Luo
    Pharmacogenomics and Personalized Medicine.2020; Volume 13: 725.     CrossRef
  • Recurrent Vulvovaginal Candidiasis: An Immunological Perspective
    Diletta Rosati, Mariolina Bruno, Martin Jaeger, Jaap ten Oever, Mihai G. Netea
    Microorganisms.2020; 8(2): 144.     CrossRef
  • Immune modulation by complement receptor 3-dependent human monocyte TGF-β1-transporting vesicles
    Luke D. Halder, Emeraldo A. H. Jo, Mohammad Z. Hasan, Marta Ferreira-Gomes, Thomas Krüger, Martin Westermann, Diana I. Palme, Günter Rambach, Niklas Beyersdorf, Cornelia Speth, Ilse D. Jacobsen, Olaf Kniemeyer, Berit Jungnickel, Peter F. Zipfel, Christine
    Nature Communications.2020;[Epub]     CrossRef
  • An Overview on Conventional and Non-Conventional Therapeutic Approaches for the Treatment of Candidiasis and Underlying Resistance Mechanisms in Clinical Strains
    Sara B. Salazar, Rita S. Simões, Nuno A. Pedro, Maria Joana Pinheiro, Maria Fernanda N. N. Carvalho, Nuno P. Mira
    Journal of Fungi.2020; 6(1): 23.     CrossRef
  • The role of Candida albicans in root caries biofilms: an RNA-seq analysis
    Laís Daniela EV, Nailê DAMÉ-TEIXEIRA, Thuy DO, Marisa MALTZ, Clarissa Cavalcanti Fatturi PAROLO
    Journal of Applied Oral Science.2020;[Epub]     CrossRef
  • Candida and Candidiasis—Opportunism Versus Pathogenicity: A Review of the Virulence Traits
    Cristina Nicoleta Ciurea, Irina-Bianca Kosovski, Anca Delia Mare, Felicia Toma, Ionela Anca Pintea-Simon, Adrian Man
    Microorganisms.2020; 8(6): 857.     CrossRef
  • In vitro characterization, ADME analysis, and histological and toxicological evaluation of BM1, a macrocyclic amidinourea active against azole-resistant Candida strains
    Francesco Orofino, Giuseppina I. Truglio, Diego Fiorucci, Ilaria D'Agostino, Matteo Borgini, Federica Poggialini, Claudio Zamperini, Elena Dreassi, Laura Maccari, Riccardo Torelli, Cecilia Martini, Micaela Bernabei, Jacques F. Meis, Nitesh Kumar Khandelwa
    International Journal of Antimicrobial Agents.2020; 55(3): 105865.     CrossRef
  • Surface, adhesiveness and virulence aspects of Candida haemulonii species complex
    Lívia S Ramos, Simone S C Oliveira, Laura N Silva, Marcela Q Granato, Diego S Gonçalves, Susana Frases, Sergio H Seabra, Alexandre J Macedo, Lucimar F Kneipp, Marta H Branquinha, André L S Santos
    Medical Mycology.2020; 58(7): 973.     CrossRef
  • Gastric Perforation Associated with Candidiasis and NSAIDS
    Febriana Aquaresta, Arthur Pohan Kawilarang, Pepy Dwi Endraswari
    Indonesian Journal of Tropical and Infectious Disease.2020; 8(3): 168.     CrossRef
  • Candida Biofilms: An Update on Developmental Mechanisms and Therapeutic Challenges
    Patrícia Pimentel de Barros, Rodnei Dennis Rossoni, Cheyenne Marçal de Souza, Liliana Scorzoni, Juliana De Camargo Fenley, Juliana Campos Junqueira
    Mycopathologia.2020; 185(3): 415.     CrossRef
  • Candida isolates causing candidemia show different degrees of virulence in Galleria mellonella
    Laura Judith Marcos-Zambrano, María Ángeles Bordallo-Cardona, Elisa Borghi, Monica Falleni, Delfina Tosi, Patricia Muñoz, Pilar Escribano, Jesús Guinea
    Medical Mycology.2020; 58(1): 83.     CrossRef
  • Increasing Susceptibility of Drug-Resistant Candida albicans to Fluconazole and Terbinafine by 2(5H)-Furanone Derivative
    Irshad S. Sharafutdinov, Georgii D. Ozhegov, Alina E. Sabirova, Valentina V. Novikova, Svetlana A. Lisovskaya, Alsu M. Khabibrakhmanova, Almira R. Kurbangalieva, Mikhail I. Bogachev, Airat R. Kayumov
    Molecules.2020; 25(3): 642.     CrossRef
  • Effects of histatin 5 modifications on antifungal activity and kinetics of proteolysis
    Svetlana P. Ikonomova, Parisa Moghaddam‐Taaheri, Yan Wang, Mary T. Doolin, Kimberly M. Stroka, Bernhard Hube, Amy J. Karlsson
    Protein Science.2020; 29(2): 480.     CrossRef
  • Moonlighting Proteins at the Candidal Cell Surface
    Dorota Satala, Justyna Karkowska-Kuleta, Aleksandra Zelazna, Maria Rapala-Kozik, Andrzej Kozik
    Microorganisms.2020; 8(7): 1046.     CrossRef
  • Recognition of Candida albicans and Role of Innate Type 17 Immunity in Oral Candidiasis
    Anna Pavlova, Irshad Sharafutdinov
    Microorganisms.2020; 8(9): 1340.     CrossRef
  • Sugar Phosphorylation Controls Carbon Source Utilization and Virulence of Candida albicans
    Stefanie Wijnants, Michael Riedelberger, Philipp Penninger, Karl Kuchler, Patrick Van Dijck
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Mechanisms of action of antimicrobial peptides ToAP2 and NDBP-5.7 against Candida albicans planktonic and biofilm cells
    Jhones do Nascimento Dias, Calliandra de Souza Silva, Alyne Rodrigues de Araújo, Jessica Maria Teles Souza, Paulo Henrique de Holanda Veloso Júnior, Wanessa Felix Cabral, Maria da Glória da Silva, Peter Eaton, José Roberto de Souza de Almeida Leite, André
    Scientific Reports.2020;[Epub]     CrossRef
  • Targeting pathogenic fungi, bacteria and fungal-bacterial biofilms by newly synthesized quaternary ammonium derivative of pyridoxine and terbinafine with dual action profile
    Marsel R. Garipov, Alina E. Sabirova, Roman S. Pavelyev, Nikita V. Shtyrlin, Svetlana A. Lisovskaya, Oksana V. Bondar, Aleksandr V. Laikov, Julia G. Romanova, Mikhail I. Bogachev, Airat R. Kayumov, Yurii G. Shtyrlin
    Bioorganic Chemistry.2020; 104: 104306.     CrossRef
  • Virulence Factors in Sporothrix schenckii, One of the Causative Agents of Sporotrichosis
    Alma K. Tamez-Castrellón, Orazio Romeo, Laura C. García-Carnero, Nancy E. Lozoya-Pérez, Héctor M. Mora-Montes
    Current Protein & Peptide Science.2020; 21(3): 295.     CrossRef
  • The Effects of Mentha × piperita Essential Oil on C. albicans Growth, Transition, Biofilm Formation, and the Expression of Secreted Aspartyl Proteinases Genes
    Chahrazed Benzaid, Amine Belmadani, Ryad Djeribi, Mahmoud Rouabhia
    Antibiotics.2019; 8(1): 10.     CrossRef
  • Oxidative and nitrosative stress responses during macrophage–Candida albicansbiofilm interaction
    Julio E Arce Miranda, José L Baronetti, Claudia E Sotomayor, M Gabriela Paraje
    Medical Mycology.2019; 57(1): 101.     CrossRef
  • Promising antifungal activity of Croton tricolor stem essential oil against Candida yeasts
    Fabrício Mendes Miranda, Baraquizio Braga do Nascimento Junior, Rosane Moura Aguiar, Rafael Santos Pereira, Adonias De Oliveira Teixeira, Djalma Menezes De Oliveira, Edeltrudes de Oliveira Lima, Silvia Siag Oigman, Cláudia Moraes de Rezende, Guglielmina F
    Journal of Essential Oil Research.2019; 31(3): 223.     CrossRef
  • Interfacial Behavior of Fumonisin B1 Toxin and Its Degradation on the Membrane
    Shiv K. Sharma, Sijan Poudel Sharma, Darlene Miller, Jean-Marie A. Parel, Roger M. Leblanc
    Langmuir.2019; 35(7): 2814.     CrossRef
  • Epidemiology and antifungal susceptibility patterns of Candida isolates from Greek women with vulvovaginal candidiasis
    Sofia Maraki, Viktoria Eirini Mavromanolaki, Dimitra Stafylaki, Eleni Nioti, George Hamilos, Anna Kasimati
    Mycoses.2019; 62(8): 692.     CrossRef
  • Perspectives on Anti-Candida Drug Development
    Ashok K. Dubey, Rajeev K. Singla
    Current Topics in Medicinal Chemistry.2019; 19(26): 2375.     CrossRef
  • Farnesol, a Quorum-Sensing Molecule of Candida albicans Triggers the Release of Neutrophil Extracellular Traps
    Marcin Zawrotniak, Karolina Wojtalik, Maria Rapala-Kozik
    Cells.2019; 8(12): 1611.     CrossRef
  • Divergent Approaches to Virulence in C. albicans and C. glabrata: Two Sides of the Same Coin
    Mónica Galocha, Pedro Pais, Mafalda Cavalheiro, Diana Pereira, Romeu Viana, Miguel C. Teixeira
    International Journal of Molecular Sciences.2019; 20(9): 2345.     CrossRef
  • Keeping Candida commensal: how lactobacilli antagonize pathogenicity of Candida albicans in an in vitro gut model
    Katja Graf, Antonia Last, Rena Gratz, Stefanie Allert, Susanne Linde, Martin Westermann, Marko Gröger, Alexander S. Mosig, Mark S. Gresnigt, Bernhard Hube
    Disease Models & Mechanisms.2019;[Epub]     CrossRef
  • Determination of the effects of cinnamon bark fractions on Candida albicans and oral epithelial cells
    Marie-Pier Veilleux, Daniel Grenier
    BMC Complementary and Alternative Medicine.2019;[Epub]     CrossRef
  • Novel mitochondrial complex I-inhibiting peptides restrain NADH dehydrogenase activity
    Yao-Peng Xue, Mou-Chieh Kao, Chung-Yu Lan
    Scientific Reports.2019;[Epub]     CrossRef
  • “Candida AlbicansInteractions With The Host: Crossing The Intestinal Epithelial Barrier”
    Louise Basmaciyan, Fabienne Bon, Tracy Paradis, Pierre Lapaquette, Frédéric Dalle
    Tissue Barriers.2019; 7(2): 1612661.     CrossRef
  • On‐site secretory vesicle delivery drives filamentous growth in the fungal pathogenCandida albicans
    Allon Weiner, François Orange, Sandra Lacas‐Gervais, Katya Rechav, Vikram Ghugtyal, Martine Bassilana, Robert A. Arkowitz
    Cellular Microbiology.2019; 21(1): e12963.     CrossRef
  • A small secreted protein triggers a TLR2/4-dependent inflammatory response during invasive Candida albicans infection
    Wenjuan Wang, Zihou Deng, Hongyu Wu, Qun Zhao, Tiantian Li, Wencheng Zhu, Xiongjun Wang, Longhai Tang, Chengshu Wang, Shu-Zhong Cui, Hui Xiao, Jiangye Chen
    Nature Communications.2019;[Epub]     CrossRef
  • Neutrophil extracellular traps in fungal infection
    Constantin F. Urban, Jeniel E. Nett
    Seminars in Cell & Developmental Biology.2019; 89: 47.     CrossRef
  • Yeasts isolated from tropical fruit ice creams: diversity, antifungal susceptibility and adherence to buccal epithelial cells
    Gabriella Breder Lara Lima, Carlos Augusto Rosa, Susana Johann, Mariana de Lourdes Almeida Vieira, Fátima de Cássia Oliveira Gomes
    Brazilian Journal of Food Technology.2019;[Epub]     CrossRef
  • Selection of Candida albicans trisomy during oropharyngeal infection results in a commensal-like phenotype
    Anja Forche, Norma V. Solis, Marc Swidergall, Robert Thomas, Alison Guyer, Annette Beach, Gareth A. Cromie, Giang T. Le, Emily Lowell, Norman Pavelka, Judith Berman, Aimeé M. Dudley, Anna Selmecki, Scott G. Filler, Gavin Sherlock
    PLOS Genetics.2019; 15(5): e1008137.     CrossRef
  • Candida albicans cell wall mannoprotein synergizes with lipopolysaccharide to affect RAW264.7 proliferation, phagocytosis and apoptosis
    Xingxing Bie, Shuguang Zhang, Xue Luo, Rui-Qun Qi
    Microbial Pathogenesis.2019; 131: 98.     CrossRef
  • Characterization of aCandida albicansisolate from a recurrent cervical lymphadenitis patient
    Chengzhen Zhang, Wenjuan Wang, Qingtao Kong, Fang Liu, Jiangye Chen, Hong Sang
    Mycologia.2019; 111(6): 942.     CrossRef
  • Disinfection of Pacifier Focusing on Candida albicans
    Danielle Fernandes Lopes, Rafhaela Tostes Fernandes, Yuri de Lima Medeiros, Ana Carolina Morais Apolonio
    Clinical Pediatrics.2019; 58(14): 1540.     CrossRef
  • The Fungal Histone Acetyl Transferase Gcn5 Controls Virulence of the Human Pathogen Candida albicans through Multiple Pathways
    Raju Shivarathri, Michael Tscherner, Florian Zwolanek, Nitesh Kumar Singh, Neeraj Chauhan, Karl Kuchler
    Scientific Reports.2019;[Epub]     CrossRef
  • Inhibition of Candida albicans morphogenesis by chitinase from Lactobacillus rhamnosus GG
    Camille Nina Allonsius, Dieter Vandenheuvel, Eline F. M. Oerlemans, Mariya I. Petrova, Gilbert G. G. Donders, Paul Cos, Peter Delputte, Sarah Lebeer
    Scientific Reports.2019;[Epub]     CrossRef
  • Simple Carbohydrate Derivatives Diminish the Formation of Biofilm of the Pathogenic Yeast Candida albicans
    Olena P. Ishchuk, Olov Sterner, Ulf Ellervik, Sophie Manner
    Antibiotics.2019; 9(1): 10.     CrossRef
  • Les levures du clade CTG (clade Candida) : biologie, incidence en santé humaine et applications en biotechnologie
    T.A. Defosse, Y. Le Govic, V. Courdavault, M. Clastre, P. Vandeputte, D. Chabasse, J.-P. Bouchara, N. Giglioli-Guivarc’h, N. Papon
    Journal de Mycologie Médicale.2018; 28(2): 257.     CrossRef
  • Efficacy of a nitric oxide dressing in decreasing bacterial counts on human skin
    Rachel Nye, Kristi Robinia, Paul Peterson, Zachary Jodoin, Margaret Bohm, Meghan Anderman, Tess Peacock, Madison Moody, Alyssa Naimi, Josh Sharp
    Journal of Wound Care.2018; 27(Sup7): S19.     CrossRef
  • The Zebrafish as a Model Host for Invasive Fungal Infections
    Emily E. Rosowski, Benjamin P. Knox, Linda S. Archambault, Anna Huttenlocher, Nancy P. Keller, Robert T. Wheeler, J. Muse Davis
    Journal of Fungi.2018; 4(4): 136.     CrossRef
  • A Phenylthiazole Derivative Demonstrates Efficacy On Treatment of the Cryptococcosis & Candidiasis in Animal Models
    Nívea P Sá, Caroline M Lima, Julliana R A dos Santos, Marliete C Costa, Patrícia P de Barros, Juliana C Junqueira, Jéssica A Vaz, Renata B Oliveira, Beth B Fuchs, Eleftherios Mylonakis, Carlos A Rosa, Daniel A Santos, Susana Johann
    Future Science OA.2018;[Epub]     CrossRef
  • Role of the Inducible Adhesin CpAls7 in Binding of Candida parapsilosis to the Extracellular Matrix under Fluid Shear
    Matthew N. Neale, Kyle A. Glass, Sarah J. Longley, Denny J. Kim, Sonia S. Laforce-Nesbitt, Jeremy D. Wortzel, Sunil K. Shaw, Joseph M. Bliss, George S. Deepe
    Infection and Immunity.2018;[Epub]     CrossRef
  • Clinical strains of Lactobacillus reduce the filamentation of Candida albicans and protect Galleria mellonella against experimental candidiasis
    Rodnei Dennis Rossoni, Marisol dos Santos Velloso, Lívia Mara Alves Figueiredo, Carolina Pistille Martins, Antonio Olavo Cardoso Jorge, Juliana Campos Junqueira
    Folia Microbiologica.2018; 63(3): 307.     CrossRef
  • Innate Immune and Fungal Model of Alzheimer’s Disease
    Bodo Parady
    Journal of Alzheimer's Disease Reports.2018; 2(1): 139.     CrossRef
  • Amplitude-modulated cold atmospheric pressure plasma jet for treatment of oral candidiasis: In vivo study
    Aline Chiodi Borges, Gabriela de Morais Gouvêa Lima, Thalita Mayumi Castaldelli Nishime, Aline Vidal Lacerda Gontijo, Konstantin Georgiev Kostov, Cristiane Yumi Koga-Ito, M. Hong Nguyen
    PLOS ONE.2018; 13(6): e0199832.     CrossRef
  • Saccharomyces cerevisiae-based probiotic as novel anti-fungal and anti-inflammatory agent for therapy of vaginal candidiasis
    E. Gabrielli, E. Pericolini, N. Ballet, E. Roselletti, S. Sabbatini, P. Mosci, A. Cayzeele Decherf, F. Pélerin, S. Perito, P. Jüsten, A. Vecchiarelli
    Beneficial Microbes.2018; 9(2): 219.     CrossRef
  • The Candida albicans ENO1 gene encodes a transglutaminase involved in growth, cell division, morphogenesis, and osmotic protection
    Elizabeth Reyna-Beltrán, María Iranzo, Karla Grisel Calderón-González, Ricardo Mondragón-Flores, María Luisa Labra-Barrios, Salvador Mormeneo, Juan Pedro Luna-Arias
    Journal of Biological Chemistry.2018; 293(12): 4304.     CrossRef
  • Large-scale patterning of living colloids for dynamic studies of neutrophil–microbe interactions
    Jae Jung Kim, Eduardo Reátegui, Alex Hopke, Fatemeh Jalali, Maedeh Roushan, Patrick S. Doyle, Daniel Irimia
    Lab on a Chip.2018; 18(11): 1514.     CrossRef
  • Candida vaginitis: virulence, host response and vaccine prospects
    Flavia De Bernardis, Sofia Graziani, Flavio Tirelli, Stavroula Antonopoulou
    Medical Mycology.2018; 56(suppl_1): S26.     CrossRef
  • A survey on cellular RNA editing activity in response to Candida albicans infections
    Yaowei Huang, Yingying Cao, Jiarui Li, Yuanhua Liu, Wu Zhong, Xuan Li, Chen Chen, Pei Hao
    BMC Genomics.2018;[Epub]     CrossRef
  • Anti-biofilm activity of antibody directed against surface antigen complement receptor 3-related protein—comparison of Candida albicans and Candida dubliniensis
    Jaroslava Chupáčová, Elisa Borghi, Giulia Morace, Agata Los, Helena Bujdáková
    Pathogens and Disease.2018;[Epub]     CrossRef
  • Micafungin Enhances the Human Macrophage Response to Candida albicans through β-Glucan Exposure
    José Pedro Guirao-Abad, Ruth Sánchez-Fresneda, Francisco Machado, Juan Carlos Argüelles, María Martínez-Esparza
    Antimicrobial Agents and Chemotherapy.2018;[Epub]     CrossRef
  • Non-canonical Activities of Hog1 Control Sensitivity of Candida albicans to Killer Toxins From Debaryomyces hansenii
    Ana Morales-Menchén, Federico Navarro-García, José P. Guirao-Abad, Elvira Román, Daniel Prieto, Ioana V. Coman, Jesús Pla, Rebeca Alonso-Monge
    Frontiers in Cellular and Infection Microbiology.2018;[Epub]     CrossRef
  • 5-hydroxymethyl-2-furaldehyde from marine bacterium Bacillus subtilis inhibits biofilm and virulence of Candida albicans
    Ganapathy Ashwinkumar Subramenium, Thirukannamangai Krishnan Swetha, Prasanth Mani Iyer, Krishnaswamy Balamurugan, Shunmugiah Karutha Pandian
    Microbiological Research.2018; 207: 19.     CrossRef
  • The significance ofCandidain the human respiratory tract: our evolving understanding
    Kathryn M Pendleton, Gary B Huffnagle, Robert P Dickson
    Pathogens and Disease.2017;[Epub]     CrossRef
  • Clinical and Mycological Study of Vulvovaginal Candidiasis (VVC); Identification of Clinical Isolates by Polymerase Chain Reaction-Fragment Size Polymorphyim (PCR-FSP) Technique
    Shekufeh Pouladian, Minoo Movahedi, Rasoul Mohammadi
    Archives of Clinical Infectious Diseases.2017;[Epub]     CrossRef
  • Candida albicans mannans mediate Streptococcus mutans exoenzyme GtfB binding to modulate cross-kingdom biofilm development in vivo
    Geelsu Hwang, Yuan Liu, Dongyeop Kim, Yong Li, Damian J. Krysan, Hyun Koo, Timothy J. Mitchell
    PLOS Pathogens.2017; 13(6): e1006407.     CrossRef
  • CO2 sensing in fungi: at the heart of metabolic signaling
    Ronny Martin, Susann Pohlers, Fritz A. Mühlschlegel, Oliver Kurzai
    Current Genetics.2017; 63(6): 965.     CrossRef
  • Interaction of Candida Species with the Skin
    Andreas Kühbacher, Anke Burger-Kentischer, Steffen Rupp
    Microorganisms.2017; 5(2): 32.     CrossRef
  • Fungal interactions with the human host: exploring the spectrum of symbiosis
    Rebecca A Hall, Mairi C Noverr
    Current Opinion in Microbiology.2017; 40: 58.     CrossRef
  • Interplay between Lactobacillus rhamnosus GG and Candida and the involvement of exopolysaccharides
    Camille N. Allonsius, Marianne F. L. van den Broek, Ilke De Boeck, Shari Kiekens, Eline F. M. Oerlemans, Filip Kiekens, Kenn Foubert, Dieter Vandenheuvel, Paul Cos, Peter Delputte, Sarah Lebeer
    Microbial Biotechnology.2017; 10(6): 1753.     CrossRef
  • NLRP3 inflammasome is a key player in human vulvovaginal disease caused by Candida albicans
    Elena Roselletti, Stefano Perito, Elena Gabrielli, Antonella Mencacci, Eva Pericolini, Samuele Sabbatini, Antonio Cassone, Anna Vecchiarelli
    Scientific Reports.2017;[Epub]     CrossRef
  • Candida parapsilosis Protects Premature Intestinal Epithelial Cells from Invasion and Damage by Candida albicans
    Sara Gonia, Linda Archambault, Margaret Shevik, Marie Altendahl, Emily Fellows, Joseph M. Bliss, Robert T. Wheeler, Cheryl A. Gale
    Frontiers in Pediatrics.2017;[Epub]     CrossRef
  • Candida albicans isolates from a single hospital show low phenotypical specialization
    Enikő Boros, Walter P. Pfliegler, Renátó Kovács, Ágnes Jakab, László Majoros, Zoltán Barta, István Pócsi
    Journal of Basic Microbiology.2017; 57(11): 910.     CrossRef
  • Cold atmospheric pressure plasma jet modulates Candida albicans virulence traits
    Aline Chiodi Borges, Thalita Mayumi Castaldelli Nishime, Konstantin Georgiev Kostov, Gabriela de Morais Gouvêa Lima, Aline Vidal Lacerda Gontijo, Juliana Nóbrega Martins Marchesotti de Carvalho, Roberto Yzumi Honda, Cristiane Yumi Koga-Ito
    Clinical Plasma Medicine.2017; 7-8: 9.     CrossRef
  • The Emerging Pathogen Candida auris: Growth Phenotype, Virulence Factors, Activity of Antifungals, and Effect of SCY-078, a Novel Glucan Synthesis Inhibitor, on Growth Morphology and Biofilm Formation
    Emily Larkin, Christopher Hager, Jyotsna Chandra, Pranab K. Mukherjee, Mauricio Retuerto, Iman Salem, Lisa Long, Nancy Isham, Laura Kovanda, Katyna Borroto-Esoda, Steve Wring, David Angulo, Mahmoud Ghannoum
    Antimicrobial Agents and Chemotherapy.2017;[Epub]     CrossRef
  • Lactobacillus paracasei modulates the immune system of Galleria mellonella and protects against Candida albicans infection
    Rodnei Dennis Rossoni, Beth Burgwyn Fuchs, Patrícia Pimentel de Barros, Marisol dos Santos Velloso, Antonio Olavo Cardoso Jorge, Juliana Campos Junqueira, Eleftherios Mylonakis, George-John Nychas
    PLOS ONE.2017; 12(3): e0173332.     CrossRef
  • Phenotypic and genotypic characteristics of Candida albicans isolates from bloodstream and mucosal infections
    Marina Mandelblat, Michael Frenkel, Darren Abbey, Ronen Ben Ami, Judith Berman, Esther Segal
    Mycoses.2017; 60(8): 534.     CrossRef
  • Human fungal pathogens: Why should we learn?
    Jeong-Yoon Kim
    Journal of Microbiology.2016; 54(3): 145.     CrossRef
  • Aspartyl Proteinases of Eukaryotic Microbial Pathogens: From Eating to Heating
    Antonio Cassone, Anna Vecchiarelli, Bernhard Hube, Donald C Sheppard
    PLOS Pathogens.2016; 12(12): e1005992.     CrossRef
  • Effects of the glucocorticoid betamethasone on the interaction of Candida albicans with human epithelial cells
    Ágnes Jakab, Selene Mogavero, Toni M. Förster, Marina Pekmezovic, Nadja Jablonowski, Viktor Dombrádi, István Pócsi, Bernhard Hube
    Microbiology.2016; 162(12): 2116.     CrossRef
REVIEW] Mind-altering with the gut: Modulation of the gut-brain axis with probiotics
Namhee Kim , Misun Yun , Young Joon Oh , Hak-Jong Choi
J. Microbiol. 2018;56(3):172-182.   Published online February 28, 2018
DOI: https://doi.org/10.1007/s12275-018-8032-4
  • 606 View
  • 1 Download
  • 154 Crossref
AbstractAbstract PDF
It is increasingly evident that bidirectional interactions exist among the gastrointestinal tract, the enteric nervous system, and the central nervous system. Recent preclinical and clinical trials have shown that gut microbiota plays an important role in these gut-brain interactions. Furthermore, alterations in gut microbiota composition may be associated with pathogenesis of various neurological disorders, including stress, autism, depression, Parkinson’s disease, and Alzheimer’s disease. Therefore, the concepts of the microbiota-gut-brain axis is emerging. Here, we review the role of gut microbiota in bidirectional interactions between the gut and the brain, including neural, immune-mediated, and metabolic mechanisms. We highlight recent advances in the understanding of probiotic modulation of neurological and neuropsychiatric disorders via the gut-brain axis.

Citations

Citations to this article as recorded by  
  • Progress and Perspectives on the Estrogen–Microbiota–Brain Axis in Alzheimer’s Disease
    Miao Wang, Yu Zeng, Yingju Jin, Jing Wu, Juan Li
    Neurochemical Research.2026;[Epub]     CrossRef
  • The intersection of microbiome and autoimmunity in long COVID-19: Current insights and future directions
    Altijana Hromić-Jahjefendić, Lejla Mahmutović, Abas Sezer, Tea Bećirević, Alberto Rubio-Casillas, Elrashdy M. Redwan, Vladimir N. Uversky
    Cytokine & Growth Factor Reviews.2025; 82: 43.     CrossRef
  • Lactic acid bacteria in relieving constipation: mechanism, clinical application, challenge, and opportunity
    Tong Zhang, Wenxu Liu, Huimin Lu, Ting Cheng, Linlin Wang, Gang Wang, Hao Zhang, Wei Chen
    Critical Reviews in Food Science and Nutrition.2025; 65(3): 551.     CrossRef
  • Exploring the Multifaceted Therapeutic Potential of Probiotics: A Review of Current Insights and Applications
    Kashyapi Chakravarty, Smriti Gaur, Rohit Kumar, Niraj Kumar Jha, Piyush Kumar Gupta
    Probiotics and Antimicrobial Proteins.2025; 17(1): 341.     CrossRef
  • Lactiplantibacillus plantarum as a promising adjuvant for neurological disorders therapy through the brain-gut axis and related action pathways
    Josilaene Duarte Luiz, Cynthia Manassi, Marciane Magnani, Adriano Gomes da Cruz, Tatiana Colombo Pimentel, Silvani Verruck
    Critical Reviews in Food Science and Nutrition.2025; 65(4): 715.     CrossRef
  • Action and immunomodulatory mechanisms, formulations, and safety concerns of probiotics
    Tolulope Joshua ASHAOLU, Babett GREFF, László VARGA
    Bioscience of Microbiota, Food and Health.2025; 44(1): 4.     CrossRef
  • Neurotoxic effects of per- and polyfluoroalkyl substances (PFAS) mixture exposure in mice: Accumulations in brain and associated changes of behaviors, metabolome, and transcriptome
    Qiurong He, Qingkun Yang, Lin Wu, Yuhang He, Ni Zeng, Zhenglu Wang
    Journal of Hazardous Materials.2025; 489: 137699.     CrossRef
  • Evolutionary medicine and bioastronautics: an innovative approach in addressing adverse mental health effects to astronauts during long term space missions
    Arthur Saniotis, Maciej Henneberg, Kazhaleh Mohammadi
    Frontiers in Physiology.2025;[Epub]     CrossRef
  • Impact of Ulcerative Colitis on Parkinson’s Disease: A Study on Gut Inflammation, Barrier Dysfunction, and Neuroinflammation
    祥云 刘
    Advances in Clinical Medicine.2025; 15(02): 1210.     CrossRef
  • Association between dietary index for gut microbiota and self-reported severe headache or migraine in U.S. adults: a cross-sectional study from NHANES
    Jingjing Liu, Hailian Liu, Weiyi Li, Shaoqiang Huang
    Frontiers in Nutrition.2025;[Epub]     CrossRef
  • Recent advances in prebiotics: Classification, mechanisms, and health applications
    Sajid Ali, Muhammad Hamayun, Muhammad Siraj, Sumera Afzal Khan, Ho-Youn Kim, Bokyung Lee
    Future Foods.2025; 12: 100680.     CrossRef
  • Saccharomyces boulardii Ameliorates LPS-Induced Amyloidogenesis in Rats
    Ghazaleh Mohammadi, Fatemeh Babaei, Faezeh Golpour, Fatemeh Sadat Rashidi, Shiva Ghafghazi, Leila Dargahi, Marjan Nassiri-Asl
    Probiotics and Antimicrobial Proteins.2025; 17(6): 4922.     CrossRef
  • Gut microbiota has the potential to improve health of menopausal women by regulating estrogen
    Haiqiang Wang, Fan Shi, Lihong Zheng, Wenhui Zhou, Bowen Mi, Siyu Wu, Xiaoling Feng
    Frontiers in Endocrinology.2025;[Epub]     CrossRef
  • Precision Nutrition and Gut–Brain Axis Modulation in the Prevention of Neurodegenerative Diseases
    Dilyar Tuigunov, Yuriy Sinyavskiy, Talgat Nurgozhin, Zhibek Zholdassova, Galiya Smagul, Yerzhan Omarov, Oksana Dolmatova, Ainur Yeshmanova, Indira Omarova
    Nutrients.2025; 17(19): 3068.     CrossRef
  • Probiotic: A Gut Microbiota-Based Therapeutic Approaches for the Treatment of Parkinson’s Disease
    Monalisa Rout, Shakti Ketan Prusty, Durga Madhab Kar
    Current Reviews in Clinical and Experimental Pharmacology.2025; 20(4): 322.     CrossRef
  • Instant Cascara Beverage as a Neuroimmune Modulator of the Brain–Gut Axis: Sex-Dependent Effects in Healthy Rats
    Paula Gallego-Barceló, Yolanda López-Tofiño, Laura López-Gómez, Gema Vera, Ana Bagues, Jesús Esteban-Hernández, María Dolores del Castillo, José Antonio Uranga, Raquel Abalo
    International Journal of Molecular Sciences.2025; 26(21): 10691.     CrossRef
  • Influences of PM2.5 on gut physiology, microbiota and metabolites
    Xuanzhen Yu, Zhiying Qiu, Xiang Zeng, Sainan Zhang, Jiayue Tang, Yue Wu, Lina Zhang, Xia Huo, Cuiqing Liu, Dongling Liu
    Ecotoxicology and Environmental Safety.2025; 307: 119423.     CrossRef
  • Influence of the Gut Microbiota, Metabolism and Environment on Neuropsychiatric Disorders
    Mengxia Wang, Yan Ma, Bao Zeng, Wenhao Yang, Cuihong Huang, Benqin Tang
    Current Reviews in Clinical and Experimental Pharmacology.2025; 20(4): 334.     CrossRef
  • Neuroprotective effects of Lactiplantibacillus plantarum and Pediococcus pentosaceus strains against oxidative stress via modulation of Nrf2-mediated antioxidation and anti-apoptosis
    Yu-Rim Lee, Kyung-Min Park, Na-Kyoung Lee, Hyun-Dong Paik
    Brain Research.2025; 1866: 149925.     CrossRef
  • A Narrative Hypothesis: The Important Role of Gut Microbiota in the Modulation of Effort Tolerance in Endurance Athletes
    Jesus Álvarez-Herms, Martin Burtscher, Francisco Corbi, Adriana González, Adrián Odriozola
    Nutrients.2025; 17(17): 2836.     CrossRef
  • BANSMDA: a computational model for predicting potential microbe-disease associations based on bilinear attention networks and sparse autoencoders
    Xianzhi Liu, Mingmin Liang, Ge Yu, Shichang Tang, Ouxiang Wu, Bin Zeng, Lei Wang
    Frontiers in Genetics.2025;[Epub]     CrossRef
  • Kynurenine pathway in Parkinson’s disease: pathophysiological roles and therapeutic interventions
    Aganta Chakraborty, Priya Chaudhary, Joy Das, Utpal Bhui, Khadga Raj Aran, Md Sadique Hussain, Sumel Ashique, Biplab Debnath
    Inflammopharmacology.2025;[Epub]     CrossRef
  • Predicting Potential Microbe-Disease Associations Based on Heterogeneous Graph Random Attention Neural Network and Neural Collaborative Filtering
    Bo Wang, Wenlong Zhao, Xiaoxin Du, Jianfei Zhang, Jingyou Li, Hang Sun
    Interdisciplinary Sciences: Computational Life Sciences.2025;[Epub]     CrossRef
  • Psychobiotic potential of Lactiplantibacillus plantarum: Current perspective in neurodegeneration and geriatric therapies
    Nishant Gupta, Ashok Kumar Agarwal, M. Al-Dossari, N.S. Abd EL-Gawaad
    Brain Behavior and Immunity Integrative.2024; 5: 100038.     CrossRef
  • Glyphosate: Hepatotoxicity, Nephrotoxicity, Hemotoxicity, Carcinogenicity, and Clinical Cases of Endocrine, Reproductive, Cardiovascular, and Pulmonary System Intoxication
    Jarosław Mazuryk, Katarzyna Klepacka, Włodzimierz Kutner, Piyush Sindhu Sharma
    ACS Pharmacology & Translational Science.2024; 7(5): 1205.     CrossRef
  • The Postbiotic Properties of Butyrate in the Modulation of the Gut Microbiota: The Potential of Its Combination with Polyphenols and Dietary Fibers
    Jessica Maiuolo, Rosa Maria Bulotta, Stefano Ruga, Saverio Nucera, Roberta Macrì, Federica Scarano, Francesca Oppedisano, Cristina Carresi, Micaela Gliozzi, Vincenzo Musolino, Rocco Mollace, Carolina Muscoli, Vincenzo Mollace
    International Journal of Molecular Sciences.2024; 25(13): 6971.     CrossRef
  • A Narrative Review of Intestinal Microbiota’s Impact on Migraine with Psychopathologies
    Miriam Francavilla, Sara Facchetti, Chiara Demartini, Anna Maria Zanaboni, Chiara Amoroso, Sara Bottiroli, Cristina Tassorelli, Rosaria Greco
    International Journal of Molecular Sciences.2024; 25(12): 6655.     CrossRef
  • M3HOGAT: A Multi-View Multi-Modal Multi-Scale High-Order Graph Attention Network for Microbe-Disease Association Prediction
    Shuang Wang, Jin-Xing Liu, Feng Li, Juan Wang, Ying-Lian Gao
    IEEE Journal of Biomedical and Health Informatics.2024; 28(10): 6259.     CrossRef
  • The importance of the gut microbiome and its signals for a healthy nervous system and the multifaceted mechanisms of neuropsychiatric disorders
    Lydia Riehl, Johannes Fürst, Michaela Kress, Nadiia Rykalo
    Frontiers in Neuroscience.2024;[Epub]     CrossRef
  • The gut microbiome and the brain
    Nadiia Rykalo, Lydia Riehl, Michaela Kress
    Current Opinion in Supportive & Palliative Care.2024; 18(4): 282.     CrossRef
  • An Updated View of the Effect of Probiotic Supplement on Sports Performance: A Detailed Review
    Miray Nur Aykut, Esma Nur Erdoğan, Menşure Nur Çelik, Murat Gürbüz
    Current Nutrition Reports.2024; 13(2): 251.     CrossRef
  • Efficacy and Safety of Bacillus coagulans LBSC in Drug Induced Constipation Associated With Functional Gastrointestinal Disorder: A Double-Blind, Randomized, Interventional, Parallel, Controlled Trial a Clinical Study on Bacillus coagulans LBSC for Drug I
    Ankit Rathi, Ravikiran Pagare
    Global Advances in Integrative Medicine and Health.2024;[Epub]     CrossRef
  • The Gut Microbiota’s Role in Neurological, Psychiatric, and Neurodevelopmental Disorders
    Ioannis Alexandros Charitos, Angelo Michele Inchingolo, Laura Ferrante, Francesco Inchingolo, Alessio Danilo Inchingolo, Francesca Castellaneta, Antonella Cotoia, Andrea Palermo, Salvatore Scacco, Gianna Dipalma
    Nutrients.2024; 16(24): 4404.     CrossRef
  • Gut-Brain Axis a Key Player to Control Gut Dysbiosis in Neurological Diseases
    Ieshita Pan, Praveen Kumar Issac, Md. Mostafizur Rahman, Ajay Guru, Jesu Arockiaraj
    Molecular Neurobiology.2024; 61(12): 9873.     CrossRef
  • Glyphosate: Impact on the microbiota-gut-brain axis and the immune-nervous system, and clinical cases of multiorgan toxicity
    Jarosław Mazuryk, Katarzyna Klepacka, Włodzimierz Kutner, Piyush Sindhu Sharma
    Ecotoxicology and Environmental Safety.2024; 271: 115965.     CrossRef
  • Functional metabolites of probiotic lactic acid bacteria in fermented dairy products
    T. Jayasree Joshi, Salini S.V, Lakshmi Mohan, P. Nandagopal, Jobil J. Arakal
    Food and Humanity.2024; 3: 100341.     CrossRef
  • Psychobiotic Properties of Lactiplantibacillus plantarum in Neurodegenerative Diseases
    Mariagiovanna Di Chiano, Fabio Sallustio, Daniela Fiocco, Maria Teresa Rocchetti, Giuseppe Spano, Paola Pontrelli, Antonio Moschetta, Loreto Gesualdo, Raffaella Maria Gadaleta, Anna Gallone
    International Journal of Molecular Sciences.2024; 25(17): 9489.     CrossRef
  • Co-administration of probiotics and vitamin D reduced disease severity and complications in patients with Parkinson’s disease: a randomized controlled clinical trial
    Alireza Zali, Shirin Hajyani, Mehri Salari, Maryam Tajabadi-Ebrahimi, Amir M. Mortazavian, Bahareh Pakpour
    Psychopharmacology.2024; 241(9): 1905.     CrossRef
  • The History and Prediction of Prebiotics and Postbiotics: A Patent Analysis
    Tao Zang, Lu Han, Zhaoxiang Lu, Lulu Tan, Dunsheng Liang, Xiaofan Shen, Xiaoping Liao, Yahong Liu, Hao Ren, Jian Sun
    Nutrients.2024; 16(3): 380.     CrossRef
  • Economic microbiology: exploring microbes as agents in economic systems
    Nicola Luigi Bragazzi, Woldegebriel Assefa Woldegerima, Anna Siri
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • Electroacupuncture remodels gut microbiota and metabolites in mice with perioperative neurocognitive impairment
    Lu Tang, Xiaojia Zhang, Binsen Zhang, Tianren Chen, Zhongying Du, Wenjing Song, Wenqiang Chen, Chunai Wang
    Experimental Gerontology.2024; 194: 112507.     CrossRef
  • Unlocking the Potential of Probiotics: A Comprehensive Review on Research, Production, and Regulation of Probiotics
    Tales Fernando da Silva, Rafael de Assis Glória, Monique Ferrary Americo, Andria dos Santos Freitas, Luis Claudio Lima de Jesus, Fernanda Alvarenga Lima Barroso, Juliana Guimarães Laguna, Nina Dias Coelho-Rocha, Laisa Macedo Tavares, Yves le Loir, Gwénaël
    Probiotics and Antimicrobial Proteins.2024; 16(5): 1687.     CrossRef
  • A computational model for potential microbe–disease association detection based on improved graph convolutional networks and multi-channel autoencoders
    Chuyi Zhang, Zhen Zhang, Feng Zhang, Bin Zeng, Xin Liu, Lei Wang
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • OGNNMDA: a computational model for microbe-drug association prediction based on ordered message-passing graph neural networks
    Jiabao Zhao, Linai Kuang, An Hu, Qi Zhang, Dinghai Yang, Chunxiang Wang
    Frontiers in Genetics.2024;[Epub]     CrossRef
  • Nutritional Modulation of the Gut–Brain Axis: A Comprehensive Review of Dietary Interventions in Depression and Anxiety Management
    Mariana Merino del Portillo, Vicente Javier Clemente-Suárez, Pablo Ruisoto, Manuel Jimenez, Domingo Jesús Ramos-Campo, Ana Isabel Beltran-Velasco, Ismael Martínez-Guardado, Alejandro Rubio-Zarapuz, Eduardo Navarro-Jiménez, José Francisco Tornero-Aguilera
    Metabolites.2024; 14(10): 549.     CrossRef
  • Graph Convolutional Neural Network with Multi-Layer Attention Mechanism for Predicting Potential Microbe-Disease Associations
    Lei Wang, Xiaoyu Yang, Linai Kuang, Zhen Zhang, Bin Zeng, Zhiping Chen
    Current Bioinformatics.2023; 18(6): 497.     CrossRef
  • Evaluation of the Effects of Instant Cascara Beverage on the Brain-Gut Axis of Healthy Male and Female Rats
    Paula Gallego-Barceló, Ana Bagues, David Benítez-Álvarez, Yolanda López-Tofiño, Carlos Gálvez-Robleño, Laura López-Gómez, María Dolores del Castillo, Raquel Abalo
    Nutrients.2023; 16(1): 65.     CrossRef
  • MADGAN:A microbe-disease association prediction model based on generative adversarial networks
    Weixin Hu, Xiaoyu Yang, Lei Wang, Xianyou Zhu
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Inflammation, Lifestyle Factors, and the Microbiome‐Gut‐Brain Axis: Relevance to Depression and Antidepressant Action
    Francisco Donoso, John F. Cryan, Loreto Olavarría‐Ramírez, Yvonne M. Nolan, Gerard Clarke
    Clinical Pharmacology & Therapeutics.2023; 113(2): 246.     CrossRef
  • Probiotics as functional foods: How probiotics can alleviate the symptoms of neurological disabilities
    Shadi Aghamohammad, Asal Hafezi, Mahdi Rohani
    Biomedicine & Pharmacotherapy.2023; 163: 114816.     CrossRef
  • Analysis of the spinal and vagal afferent innervation of the mouse colon using neuronal retrograde tracers
    Samira Osman, Ayssar Tashtush, David E. Reed, Alan E. Lomax
    Cell and Tissue Research.2023; 392(3): 659.     CrossRef
  • Impact of probiotics on cognition and constipation in the elderly: A meta-analysis
    Neeraja Recharla, Jihee Choi, Pradeep Puligundla, Seon-Joo Park, Hae-Jeung Lee
    Heliyon.2023; 9(7): e18306.     CrossRef
  • Microbial Reprogramming in Obsessive–Compulsive Disorders: A Review of Gut–Brain Communication and Emerging Evidence
    Ghizlane Bendriss, Ross MacDonald, Clare McVeigh
    International Journal of Molecular Sciences.2023; 24(15): 11978.     CrossRef
  • The Role of Bifidobacterium bifidum novaBBF7, Bifidobacterium longum novaBLG2 and Lactobacillus paracasei TJB8 to Improve Mechanisms Linked to Neuronal Cells Protection against Oxidative Condition in a Gut-Brain Axis Model
    Sara Ferrari, Rebecca Galla, Simone Mulè, Giorgia Rosso, Arianna Brovero, Valentina Macchi, Sara Ruga, Francesca Uberti
    International Journal of Molecular Sciences.2023; 24(15): 12281.     CrossRef
  • A Review on the Protective Effects of Probiotics against Alzheimer’s Disease
    Vibhuti Mishra, Dhananjay Yadav, Kavita Singh Solanki, Bhupendra Koul, Minseok Song
    Biology.2023; 13(1): 8.     CrossRef
  • Ingestion of Lacticaseibacillus rhamnosus Fmb14 prevents depression-like behavior and brain neural activity via the microbiota–gut–brain axis in colitis mice
    Hongyuan Zhao, Xiaoyu Chen, Li Zhang, Chao Tang, Fanqiang Meng, Libang Zhou, Ping Zhu, Zhaoxin Lu, Yingjian Lu
    Food & Function.2023; 14(4): 1909.     CrossRef
  • Intake of Lactiplantibacillus plantarum HEAL9 Improves Cognition in Moderately Stressed Subjects: A Randomized Controlled Study
    Gunilla Önning, Caroline Montelius, Magnus Hillman, Niklas Larsson
    Nutrients.2023; 15(15): 3466.     CrossRef
  • Gut microbiota in perioperative neurocognitive disorders: current evidence and future directions
    Yan Sun, Kexin Wang, Weiliang Zhao
    Frontiers in Immunology.2023;[Epub]     CrossRef
  • 'The Mecca of the Economist Lies in Economic Microbiology': Microbes as Economic Agents and Decision-Makers
    Nicola Luigi Bragazzi, Anna Siri
    SSRN Electronic Journal.2023;[Epub]     CrossRef
  • Protective effects of enzymatic hydrolysis products of pomelo peel cellulose on Lactobacillus plantarum during freeze-drying process
    Congcong Peng, Bingjie Liu, Zhong Chen
    Applied Food Research.2023; 3(1): 100301.     CrossRef
  • IgA-Biome Profiles Correlate with Clinical Parkinson’s Disease Subtypes
    Eric L. Brown, Heather T. Essigmann, Kristi L. Hoffman, Ashley S. Alexander, Michael Newmark, Zhi-Dong Jiang, Jessika Suescun, Mya C. Schiess, Craig L. Hanis, Herbert L. DuPont
    Journal of Parkinson’s Disease.2023; 13(4): 501.     CrossRef
  • Psychobiotics: Are they the future intervention for managing depression and anxiety? A literature review
    Kim Ross
    EXPLORE.2023; 19(5): 669.     CrossRef
  • Potential associations between organic dairy products, gut microbiome, and gut health: A review
    Anna Elizabeth Wittwer, Simon Gardner Lee, Chaminda Senaka Ranadheera
    Food Research International.2023; 172: 113195.     CrossRef
  • Bifidobacterium spp. as functional foods: A review of current status, challenges, and strategies
    Bao-Lin He, Yong Xiong, Teng-Gen Hu, Min-Hua Zong, Hong Wu
    Critical Reviews in Food Science and Nutrition.2023; 63(26): 8048.     CrossRef
  • Probiotics in Periodontal and Peri-Implant Health Management: Biofilm Control, Dysbiosis Reversal, and Host Modulation
    Massimo Amato, Federica Di Spirito, Francesco D’Ambrosio, Giovanni Boccia, Giuseppina Moccia, Francesco De Caro
    Microorganisms.2022; 10(11): 2289.     CrossRef
  • Targeting the MGBA with -biotics in epilepsy: New insights from preclinical and clinical studies
    Antonella Riva, Elisa Pozzati, Mattia Grasso, Carmen De Caro, Emilio Russo, Alberto Verrotti, Pasquale Striano
    Neurobiology of Disease.2022; 170: 105758.     CrossRef
  • Folate and vitamin B-12 deficiencies additively impaire memory function and disturb the gut microbiota in amyloid-β infused rats
    Sunmin Park, Sunna Kang, Da Sol Kim
    International Journal for Vitamin and Nutrition Research.2022; 92(3-4): 169.     CrossRef
  • Intestinal Barrier Function and Immune Homeostasis Are Missing Links in Obesity and Type 2 Diabetes Development
    Sylvia Riedel, Carmen Pheiffer, Rabia Johnson, Johan Louw, Christo J. F. Muller
    Frontiers in Endocrinology.2022;[Epub]     CrossRef
  • Are We What We Eat? Impact of Diet on the Gut–Brain Axis in Parkinson’s Disease
    Margherita Alfonsetti, Vanessa Castelli, Michele d’Angelo
    Nutrients.2022; 14(2): 380.     CrossRef
  • Role of Gut Microbiome in Autism Spectrum Disorder and Its Therapeutic Regulation
    Masuma Afrin Taniya, Hea-Jong Chung, Abdullah Al Mamun, Safaet Alam, Md. Abdul Aziz, Nazim Uddin Emon, Md. Minarul Islam, Seong-T shool Hong, Bristy Rani Podder, Anjuman Ara Mimi, Suzia Aktar Suchi, Jian Xiao
    Frontiers in Cellular and Infection Microbiology.2022;[Epub]     CrossRef
  • Fate of dietary phytochemicals in human gut and interaction with intestinal flora
    Bin Du, Zilong Ma, Guang Xin, Yuedong Yang, Baojun Xu
    Journal of Food Bioactives.2022; : 43.     CrossRef
  • Expression of the Antimicrobial Peptide Piscidin 1 and Neuropeptides in Fish Gill and Skin: A Potential Participation in Neuro-Immune Interaction
    Giacomo Zaccone, Gioele Capillo, Jorge Manuel Oliveira Fernandes, Viswanath Kiron, Eugenia Rita Lauriano, Alessio Alesci, Patrizia Lo Cascio, Maria Cristina Guerrera, Michal Kuciel, Krystyna Zuwala, Jose Manuel Icardo, Atsushi Ishimatsu, Ryosuke Murata, T
    Marine Drugs.2022; 20(2): 145.     CrossRef
  • Impact of protectant uptake on the shelf-life of dried Lacticaseibacillus rhamnosus
    Sarah Priour, Alan Welman, Harjinder Singh, Ashling Ellis
    LWT.2022; 153: 112394.     CrossRef
  • What do experimental animal models of mood disorders tell clinicians about influence of probiotics on the gut-brain axis?
    Natasza Staniak, Ewa Piaseczna-Spitaleri, Grażyna Biała
    Postępy Higieny i Medycyny Doświadczalnej.2022; 76(1): 380.     CrossRef
  • Memory improvement in senile rats after prebiotic and probiotic supplementation is not induced by GLP‐1
    Gabriela Andrea Servín‐Casas, Alejandra Romo‐Araiza, Gabriela Gutierrez‐Salmean, Enrique Martinez‐Solis, Andrea Paola Ibarra‐García, Yolanda Cruz‐Martinez, Roxana Rodriguez‐Barrera, Elisa García, Diego Incontri‐Abraham, Antonio Ibarra
    CNS Neuroscience & Therapeutics.2022; 28(12): 1986.     CrossRef
  • Microbiota alteration and modulation in Alzheimer's disease by gerobiotics: The gut-health axis for a good mind
    Duygu Ağagündüz, Betül Kocaadam-Bozkurt, Osman Bozkurt, Heena Sharma, Renata Esposito, Fatih Özoğul, Raffaele Capasso
    Biomedicine & Pharmacotherapy.2022; 153: 113430.     CrossRef
  • Influence of 2′-Fucosyllactose and Bifidobacterium longum Subspecies infantis Supplementation on Cognitive and Structural Brain Development in Young Pigs
    Loretta T. Sutkus, Sangyun Joung, Johanna Hirvonen, Henrik Max Jensen, Arthur C. Ouwehand, Ratna Mukherjea, Sharon M. Donovan, Ryan N. Dilger
    Frontiers in Neuroscience.2022;[Epub]     CrossRef
  • Lactobacillus plantarum-derived postbiotics prevent Salmonella-induced neurological dysfunctions by modulating gut–brain axis in mice
    Yanping Wu, Yan Wang, Aixin Hu, Xin Shu, Wenxia Huang, Jinsong Liu, Baikui Wang, Ruiqiang Zhang, Min Yue, Caimei Yang
    Frontiers in Nutrition.2022;[Epub]     CrossRef
  • THE NEGATIVE EFFECT OF PARKINSON'S DISEASE ON THE PATIENT'S PSYCHOLOGICAL AND SOCIAL WELL-BEING
    Jana Lauková, Mária Šupínová, Zuzana Frčová, Elena Janiczeková, Denisa Ivaničová, Júlia Jankovičová
    Ošetřovatelské perspektivy.2022; 5(2): 97.     CrossRef
  • Effects of different probiotic strains B. lactis, L. rhamnosus and L. reuteri on brain-intestinal axis immunomodulation in an endotoxin-induced inflammation
    Monique Michels, Gabriel Fernandes Alves Jesus, Mariane Rocha Abatti, Emily Córneo, Luana Cucker, Heloisa de Medeiros Borges, Natan da Silva Matos, Luana Bezerra Rocha, Rodrigo Dias, Carla Sasso Simon, Ana Paula Lorenzen Voytena, Marina Rossetto, Fernanda
    Molecular Neurobiology.2022; 59(8): 5168.     CrossRef
  • The Therapeutic Role of Ketogenic Diet in Neurological Disorders
    Diana Pietrzak, Kamila Kasperek, Paweł Rękawek, Iwona Piątkowska-Chmiel
    Nutrients.2022; 14(9): 1952.     CrossRef
  • Gut biofilms:Bacteroidesas model symbionts to study biofilm formation by intestinal anaerobes
    Nathalie Béchon, Jean-Marc Ghigo
    FEMS Microbiology Reviews.2022;[Epub]     CrossRef
  • Gut microbiota in anxiety and depression: Pathogenesis and therapeutics
    Stefano Bibbò, Salvatore Fusco, Gianluca Ianiro, Carlo Romano Settanni, Daniele Ferrarese, Claudio Grassi, Giovanni Cammarota, Antonio Gasbarrini
    Frontiers in Gastroenterology.2022;[Epub]     CrossRef
  • The Efficacy of S-Adenosyl Methionine and Probiotic Supplementation on Depression: A Synergistic Approach
    Hammad Ullah, Ayesha Khan, Kannan R. R. Rengasamy, Alessandro Di Minno, Roberto Sacchi, Maria Daglia
    Nutrients.2022; 14(13): 2751.     CrossRef
  • Recent Advances in Understanding the Structure and Function of the Human Microbiome
    Walaa K. Mousa, Fadia Chehadeh, Shannon Husband
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Does Multi-Strain Probiotic Supplementation Impact the Effort Capacity of Competitive Road Cyclists?
    Paulina Mazur-Kurach, Barbara Frączek, Andrzej T. Klimek
    International Journal of Environmental Research and Public Health.2022; 19(19): 12205.     CrossRef
  • Horizons in Human Aging Neuroscience: From Normal Neural Aging to Mental (Fr)Agility
    K. Richard Ridderinkhof, Harm J. Krugers
    Frontiers in Human Neuroscience.2022;[Epub]     CrossRef
  • Intestinal microbiome and modern methods of its study in children
    G. V. Volynets, A. V. Nikitin, T. A. Skvortsova
    Rossiyskiy Vestnik Perinatologii i Pediatrii (Russian Bulletin of Perinatology and Pediatrics).2022; 67(4): 5.     CrossRef
  • Active Machine learning for formulation of precision probiotics
    Laura E. McCoubrey, Nidhi Seegobin, Moe Elbadawi, Yiling Hu, Mine Orlu, Simon Gaisford, Abdul W. Basit
    International Journal of Pharmaceutics.2022; 616: 121568.     CrossRef
  • INTERVENÇÃO COM PROBIÓTICOS EM CRIANÇAS COM AUTISMO ASSOCIADO À SINTOMAS GASTROINTESTINAIS
    Pedro Ferreira Paiva Filho, Tiago Bezerra de Sá de Sousa Nogueira, Raquel Bezerra de Sá de Sousa Nogueira
    Revista Contemporânea.2022; 2(3): 287.     CrossRef
  • Changes in Gut Microbiota by the Lactobacillus casei Anchoring the K88 Fimbrial Protein Prevented Newborn Piglets From Clinical Diarrhea
    Da Qin, Yongfei Bai, Yan Li, Yanmei Huang, Liyang Li, Guihua Wang, Yi Qu, Jiabin Wang, Li-Yun Yu, Xilin Hou
    Frontiers in Cellular and Infection Microbiology.2022;[Epub]     CrossRef
  • The gut microbiota as a biomarker in epilepsy
    Emilio Russo
    Neurobiology of Disease.2022; 163: 105598.     CrossRef
  • Eating Fermented: Health Benefits of LAB-Fermented Foods
    Vincenzo Castellone, Elena Bancalari, Josep Rubert, Monica Gatti, Erasmo Neviani, Benedetta Bottari
    Foods.2021; 10(11): 2639.     CrossRef
  • Interactions between probiotic and oral pathogenic strains
    Noémi N. Gönczi, Orsolya Strang, Zoltán Bagi, Gábor Rákhely, Kornél L. Kovács
    Biologia Futura.2021; 72(4): 461.     CrossRef
  • Knowledge, patterns of consumption, and attitudes of patients with major depression disorders toward probiotics
    Abdulrahman Ismaeel Janahi, Iman Fahmi Mahmoud, Ibrahim Mohammed Al Alhareth, Alaa Yousef Alnakhli, Sara Nasser Almisrea, Hadel Mohammed Aljohani, Omar A. Alhaj, Adla Bakri Hassan, Haitham Jahrami
    Nutrition & Food Science .2021; 51(8): 1258.     CrossRef
  • The brain–gut axis, inflammatory bowel disease and bioelectronic medicine
    Michael Eberhardson, Yaakov A Levine, Laura Tarnawski, Peder S Olofsson
    International Immunology.2021; 33(6): 349.     CrossRef
  • Identifying Microbe-Disease Association Based on a Novel Back-Propagation Neural Network Model
    Hao Li, Yuqi Wang, Zhen Zhang, Yihong Tan, Zhiping Chen, Xiangyi Wang, Tingrui Pei, Lei Wang
    IEEE/ACM Transactions on Computational Biology and Bioinformatics.2021; 18(6): 2502.     CrossRef
  • The Murine Reg3a Stimulated by Lactobacillus casei Promotes Intestinal Cell Proliferation and Inhibits the Multiplication of Porcine Diarrhea Causative Agent in vitro
    Yongfei Bai, Yanmei Huang, Ying Li, Bingbing Zhang, Cuihong Xiao, Xilin Hou, Liyun Yu
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Probiotics: Not just good for the gut but for the brain too
    Sanjiv Mahadeva
    JGH Open.2021; 5(4): 413.     CrossRef
  • Impact of Gut Microbiome Lactobacillus spp. in Brain Function and its Medicament towards Alzheimer’s Disease Pathogenesis
    Shani Kunjamma John, Vani Chandrapragasam, Pinaki Dey
    Journal of Pure and Applied Microbiology.2021; 15(3): 1029.     CrossRef
  • A Randomized Controlled Trial of the Efficacy of Systemic Enzymes and Probiotics in the Resolution of Post-COVID Fatigue
    Abhijit Rathi, Swati B. Jadhav, Neha Shah
    Medicines.2021; 8(9): 47.     CrossRef
  • Microbiota shaping — the effects of probiotics, prebiotics, and fecal microbiota transplant on cognitive functions: A systematic review
    Simone Baldi, Tiziana Mundula, Giulia Nannini, Amedeo Amedei
    World Journal of Gastroenterology.2021; 27(39): 6715.     CrossRef
  • New Avenues for Parkinson’s Disease Therapeutics: Disease-Modifying Strategies Based on the Gut Microbiota
    Marina Lorente-Picón, Ariadna Laguna
    Biomolecules.2021; 11(3): 433.     CrossRef
  • Probiotics for Parkinson's disease: Current evidence and future directions
    Ai Huey Tan, Jia Wei Hor, Chun Wie Chong, Shen‐Yang Lim
    JGH Open.2021; 5(4): 414.     CrossRef
  • The emerging role of probiotics in neurodegenerative diseases: new hope for Parkinson’s disease?
    Vanessa Castelli, Michele d'Angelo, Massimiliano Quintiliani, Elisabetta Benedetti, MariaGrazia Cifone, Annamaria Cimini
    Neural Regeneration Research.2021; 16(4): 628.     CrossRef
  • Gut mucosal and adipose tissues as health targets of the immunomodulatory mechanisms of probiotics
    Tolulope Joshua Ashaolu, Samuel Fernández-Tomé
    Trends in Food Science & Technology.2021; 112: 764.     CrossRef
  • Microbiota intestinal: el órgano olvidado
    José Alfonso Merino Rivera, Santiago Taracena Pacheco, Enrique Juan Díaz Greene, Federico Leopoldo Rodríguez Weber
    Acta Médica Grupo Ángeles.2021; 19(1): 92.     CrossRef
  • Gut microbiota–brain axis in depression: The role of neuroinflammation
    Anelise S. Carlessi, Laura A. Borba, Alexandra I. Zugno, João Quevedo, Gislaine Z. Réus
    European Journal of Neuroscience.2021; 53(1): 222.     CrossRef
  • Dietary strategies may influence human nerves and emotions by regulating intestinal microbiota: an interesting hypothesis
    Mengyu Hong, Chi‐Tang Ho, Xin Zhang, Ruilin Zhang, Yanan Liu
    International Journal of Food Science & Technology.2021; 56(7): 3311.     CrossRef
  • Probiotics Regulate Gut Microbiota: An Effective Method to Improve Immunity
    Xinzhou Wang, Peng Zhang, Xin Zhang
    Molecules.2021; 26(19): 6076.     CrossRef
  • CBC‐Clock Theory of Life – Integration of cellular circadian clocks and cellular sentience is essential for cognitive basis of life
    František Baluška, Arthur S. Reber
    BioEssays.2021;[Epub]     CrossRef
  • Gut-Derived Protein-Bound Uremic Toxins
    Amanda L. Graboski, Matthew R. Redinbo
    Toxins.2020; 12(9): 590.     CrossRef
  • CD103 Deficiency Promotes Autism (ASD) and Attention-Deficit Hyperactivity Disorder (ADHD) Behavioral Spectra and Reduces Age-Related Cognitive Decline
    Michelle Jhun, Akanksha Panwar, Ryan Cordner, Dwain K. Irvin, Lucia Veiga, Nicole Yeager, Robert N. Pechnick, Hanna Schubloom, Keith L. Black, Christopher J. Wheeler
    Frontiers in Neurology.2020;[Epub]     CrossRef
  • Gut Microbiota, Probiotics and Physical Performance in Athletes and Physically Active Individuals
    Maija Marttinen, Reeta Ala-Jaakkola, Arja Laitila, Markus J. Lehtinen
    Nutrients.2020; 12(10): 2936.     CrossRef
  • Association of chronic spinal pain with diet quality
    Suzanna Maria Zick, Susan Lynn Murphy, Justin Colacino
    PAIN Reports.2020; 5(5): e837.     CrossRef
  • The Gut Microbiota and Its Implication in the Development of Atherosclerosis and Related Cardiovascular Diseases
    Estefania Sanchez-Rodriguez, Alejandro Egea-Zorrilla, Julio Plaza-Díaz, Jerónimo Aragón-Vela, Sergio Muñoz-Quezada, Luis Tercedor-Sánchez, Francisco Abadia-Molina
    Nutrients.2020; 12(3): 605.     CrossRef
  • The potential role of interventions impacting on gut-microbiota in epilepsy
    Luigi F Iannone, Maria Gómez-Eguílaz, Rita Citaro, Emilio Russo
    Expert Review of Clinical Pharmacology.2020; 13(4): 423.     CrossRef
  • Parkinson’s disease and the gastrointestinal microbiome
    Michal Lubomski, Ai Huey Tan, Shen-Yang Lim, Andrew J. Holmes, Ryan L. Davis, Carolyn M. Sue
    Journal of Neurology.2020; 267(9): 2507.     CrossRef
  • Nutraceuticals as modulators of gut microbiota: Role in therapy
    Eamonn M.M. Quigley
    British Journal of Pharmacology.2020; 177(6): 1351.     CrossRef
  • Effects of the probiotic formulation SLAB51 in in vitro and in vivo Parkinson’s disease models
    Vanessa Castelli, Michele d’Angelo, Francesca Lombardi, Margherita Alfonsetti, Andrea Antonosante, Mariano Catanesi, Elisabetta Benedetti, Paola Palumbo, Maria Grazia Cifone, Antonio Giordano, Giovambattista Desideri, Annamaria Cimini
    Aging.2020; 12(5): 4641.     CrossRef
  • Recent advances in modulating the microbiome
    Eamonn M.M Quigley, Prianka Gajula
    F1000Research.2020; 9: 46.     CrossRef
  • Protease‐dependent excitation of nodose ganglion neurons by commensal gut bacteria
    Sabindra Pradhananga, Ayssar A. Tashtush, Emma Allen‐Vercoe, Elaine O. Petrof, Alan E. Lomax
    The Journal of Physiology.2020; 598(11): 2137.     CrossRef
  • Probiotics Alleviate the Progressive Deterioration of Motor Functions in a Mouse Model of Parkinson’s Disease
    Tsung-Hsun Hsieh, Chi-Wei Kuo, Kai-Hsuan Hsieh, Meng-Jyh Shieh, Chih-Wei Peng, Yen-Chien Chen, Ying-Ling Chang, Ying-Zu Huang, Chih-Chung Chen, Pi-Kai Chang, Kai-Yun Chen, Hsin-Yung Chen
    Brain Sciences.2020; 10(4): 206.     CrossRef
  • Activity of five antimicrobial peptides against periodontal as well as non-periodontal pathogenic strains
    Katharina Enigk, Holger Jentsch, Arne C. Rodloff, Klaus Eschrich, Catalina-Suzana Stingu
    Journal of Oral Microbiology.2020; 12(1): 1829405.     CrossRef
  • Fermentation revival in the classroom: investigating ancient human practices as CUREs for modern diseases
    Jennifer K Lyles, Monika Oli
    FEMS Microbiology Letters.2020;[Epub]     CrossRef
  • Behavioural and brain ultrastructural changes following the systemic administration of propionic acid in adolescent male rats. Further development of a rodent model of autism
    Giorgi Lobzhanidze, Nadezhda Japaridze, Tamar Lordkipanidze, Fuad Rzayev, Derrick MacFabe, Mzia Zhvania
    International Journal of Developmental Neuroscience.2020; 80(2): 139.     CrossRef
  • Possible links between gut–microbiota and attention-deficit/hyperactivity disorders in children and adolescents
    Nonglak Boonchooduang, Orawan Louthrenoo, Nipon Chattipakorn, Siriporn C. Chattipakorn
    European Journal of Nutrition.2020; 59(8): 3391.     CrossRef
  • Bacillus Subtilis Delays Neurodegeneration and Behavioral Impairment in the Alzheimer’s Disease Model Caenorhabditis Elegans
    Sebastián Cogliati, Victoria Clementi, Marcos Francisco, Cira Crespo, Federico Argañaraz, Roberto Grau
    Journal of Alzheimer’s Disease.2020; 73(3): 1035.     CrossRef
  • Urinary carboxylic acids (UCAs) in subjects with autism spectrum disorder and their association with bacterial overgrowth
    Paulina Gątarek, Jagoda Jóźwik-Pruska, Geir Bjørklund, Salvatore Chirumbolo, Joanna Kałużna-Czaplińska
    Reviews in Analytical Chemistry.2020; 39(1): 78.     CrossRef
  • Intake of Lactiplantibacillus plantarum HEAL9 reduces the inflammatory markers soluble fractalkine and CD163 during acute stress: A randomized, double blind, placebo-controlled study
    Gunilla Önning, Magnus Hillman, Maria Hedin, Caroline Montelius, Joakim Eriksson, Siv Ahrné, Peter Jönsson
    Physiology & Behavior.2020; 225: 113083.     CrossRef
  • Non-alcoholic fatty liver disease (NAFLD) as a neglected metabolic companion of psychiatric disorders: common pathways and future approaches
    Óscar Soto-Angona, Gerard Anmella, María José Valdés-Florido, Nieves De Uribe-Viloria, Andre F. Carvalho, Brenda W. J. H. Penninx, Michael Berk
    BMC Medicine.2020;[Epub]     CrossRef
  • Exploiting the gut microbiota’s fermentation capabilities towards disease prevention
    Thomas Gurry, Leonardo Scapozza
    Journal of Pharmaceutical and Biomedical Analysis.2020; 189: 113469.     CrossRef
  • The Promising Role of Probiotics in Managing the Altered Gut in Autism Spectrum Disorders
    Basma Abdellatif, Clare McVeigh, Ghizlane Bendriss, Ali Chaari
    International Journal of Molecular Sciences.2020; 21(11): 4159.     CrossRef
  • Human Gut Microbiota: Friend or Foe?
    Monika Pliszka, Leszek Szablewski
    OBM Hepatology and Gastroenterology.2020; 04(03): 1.     CrossRef
  • Gut feeling: randomized controlled trials of probiotics for the treatment of clinical depression: Systematic review and meta-analysis
    Viktoriya Nikolova, Syed Yawar Zaidi, Allan H. Young, Anthony J. Cleare, James M. Stone
    Therapeutic Advances in Psychopharmacology.2019;[Epub]     CrossRef
  • Probiotics and prebiotics in intestinal health and disease: from biology to the clinic
    Mary Ellen Sanders, Daniel J. Merenstein, Gregor Reid, Glenn R. Gibson, Robert A. Rastall
    Nature Reviews Gastroenterology & Hepatology.2019; 16(10): 605.     CrossRef
  • Probiotics mixture increases butyrate, and subsequently rescues the nigral dopaminergic neurons from MPTP and rotenone-induced neurotoxicity
    Sunil Srivastav, Sabita Neupane, Sunil Bhurtel, Nikita Katila, Sailesh Maharjan, Hyukjae Choi, Jin Tae Hong, Dong-Young Choi
    The Journal of Nutritional Biochemistry.2019; 69: 73.     CrossRef
  • Lactobacillus plantarum PS128 ameliorates 2,5-Dimethoxy-4-iodoamphetamine-induced tic-like behaviors via its influences on the microbiota–gut-brain-axis
    Jian-Fu Liao, Yun-Fang Cheng, Shiao-Wen Li, Wang-Tso Lee, Chih-Chieh Hsu, Chien-Chen Wu, One-Jang Jeng, Sabrina Wang, Ying-Chieh Tsai
    Brain Research Bulletin.2019; 153: 59.     CrossRef
  • Gut microbiota in ALS: possible role in pathogenesis?
    Pamela A. McCombe, Robert D. Henderson, Aven Lee, John D. Lee, Trent M. Woodruff, Restuadi Restuadi, Allan McRae, Naomi R. Wray, Shyuan Ngo, Frederik J. Steyn
    Expert Review of Neurotherapeutics.2019; 19(9): 785.     CrossRef
  • Could probiotics be the panacea alternative to the use of antimicrobials in livestock diets?
    A. Cameron, T.A. McAllister
    Beneficial Microbes.2019; 10(7): 773.     CrossRef
  • Probiotic mixture of Lactobacillus helveticus R0052 and Bifidobacterium longum R0175 attenuates hippocampal apoptosis induced by lipopolysaccharide in rats
    Ghazaleh Mohammadi, Leila Dargahi, Taghi Naserpour, Yazdan Mirzanejad, Safar Ali Alizadeh, Amir Peymani, Marjan Nassiri-Asl
    International Microbiology.2019; 22(3): 317.     CrossRef
  • Purging and the body in the therapeutic use of ayahuasca
    Evgenia Fotiou, Alex K. Gearin
    Social Science & Medicine.2019; 239: 112532.     CrossRef
  • Nutritional Modulation of Immune and Central Nervous System Homeostasis: The Role of Diet in Development of Neuroinflammation and Neurological Disease
    José Antonio Estrada, Irazú Contreras
    Nutrients.2019; 11(5): 1076.     CrossRef
  • Ice cream as a carrier of Lactobacillus acidophilus
    Светлана Рябцева, Svetlana Ryabtseva, Валида Ахмедова, Valida Akhmedova, Георгий Анисимов, Georgiy Anisimov
    Food Processing: Techniques and Technology.2019; 48(2): 5.     CrossRef
  • Impact of Gut Dysbiosis on Neurohormonal Pathways in Chronic Kidney Disease
    Nima H. Jazani, Javad Savoj, Michael Lustgarten, Wei Ling Lau, Nosratola D. Vaziri
    Diseases.2019; 7(1): 21.     CrossRef
  • Social amoebae establish a protective interface with their bacterial associates by lectin agglutination
    Timothy Farinholt, Christopher Dinh, Adam Kuspa
    Science Advances.2019;[Epub]     CrossRef
  • Probiotics in Food Systems: Significance and Emerging Strategies Towards Improved Viability and Delivery of Enhanced Beneficial Value
    Antonia Terpou, Aikaterini Papadaki, Iliada Lappa, Vasiliki Kachrimanidou, Loulouda Bosnea, Nikolaos Kopsahelis
    Nutrients.2019; 11(7): 1591.     CrossRef
  • Gut–brain axis in the executive function of austism spectrum disorder
    Pablo Roman, Lola Rueda-Ruzafa, Diana Cardona, Alda Cortes-Rodríguez
    Behavioural Pharmacology.2018; 29(7): 654.     CrossRef
  • One Health, Fermented Foods, and Gut Microbiota
    Victoria Bell, Jorge Ferrão, Lígia Pimentel, Manuela Pintado, Tito Fernandes
    Foods.2018; 7(12): 195.     CrossRef
  • Gut microbiomes and their metabolites shape human and animal health
    Woojun Park
    Journal of Microbiology.2018; 56(3): 151.     CrossRef
  • Microbiota in the Gastrointestinal Tract
    Walburga Dieterich, Monic Schink, Yurdagül Zopf
    Medical Sciences.2018; 6(4): 116.     CrossRef
  • What Is the Evidence that Parkinson’s Disease Is a Prion Disorder, Which Originates in the Gut?
    Małgorzata Kujawska, Jadwiga Jodynis-Liebert
    International Journal of Molecular Sciences.2018; 19(11): 3573.     CrossRef
  • Early Disruption of the Microbiome Leading to Decreased Antioxidant Capacity and Epigenetic Changes: Implications for the Rise in Autism
    Rebecca S. Eshraghi, Richard C. Deth, Rahul Mittal, Mayank Aranke, Sae-In S. Kay, Baharak Moshiree, Adrien A. Eshraghi
    Frontiers in Cellular Neuroscience.2018;[Epub]     CrossRef
  • The intestinal microbiome and Alzheimer's disease: A review
    Zhuo Li, Hua Zhu, Ling Zhang, Chuan Qin
    Animal Models and Experimental Medicine.2018; 1(3): 180.     CrossRef
REVIEW] Mechanisms of Synergy in Polymicrobial Infections
Justine L. Murray , Jodi L. Connell , Apollo Stacy , Keith H. Turner , Marvin Whiteley
J. Microbiol. 2014;52(3):188-199.   Published online March 1, 2014
DOI: https://doi.org/10.1007/s12275-014-4067-3
  • 440 View
  • 0 Download
  • 136 Crossref
AbstractAbstract PDF
Communities of microbes can live almost anywhere and contain many different species. Interactions between members of these communities often determine the state of the habitat in which they live. When these habitats include sites on the human body, these interactions can affect health and disease. Polymicrobial synergy can occur during infection, in which the combined effect of two or more microbes on disease is worse than seen with any of the individuals alone. Powerful genomic methods are increasingly used to study microbial communities, including metagenomics to reveal the members and genetic content of a community and metatranscriptomics to describe the activities of community members. Recent efforts focused toward a mechanistic understanding of these interactions have led to a better appreciation of the precise bases of polymicrobial synergy in communities containing bacteria, eukaryotic microbes, and/or viruses. These studies have benefited from advances in the development of in vivo models of polymicrobial infection and modern techniques to profile the spatial and chemical bases of intermicrobial communication. This review describes the breadth of mechanisms microbes use to interact in ways that impact pathogenesis and techniques to study polymicrobial communities.

Citations

Citations to this article as recorded by  
  • The exometabolome as a hidden driver of bacterial virulence and pathogenesis
    Saurabh Chugh, Fabien Létisse, Olivier Neyrolles
    Trends in Microbiology.2025; 33(5): 546.     CrossRef
  • Lethal Synergistic Infections by Two Concurrent Respiratory Pathogens
    Kevin Roe
    Archives of Medical Research.2025; 56(1): 103101.     CrossRef
  • Ultrastructural polymicrobial Staphylococcus aureus–Pseudomonas aeruginosa interactions and antimicrobial resistance in ex vivo cornea model
    Sanchita Mitra, Nagapriya Banka, Soumyava Basu, Tirupathi Rao
    Future Microbiology.2025; 20(2): 117.     CrossRef
  • Polymicrobial urine cultures: reconciling contamination with the urobiome while recognizing the pathogens
    Robert B. Moreland, Linda Brubaker, Alan J. Wolfe
    Frontiers in Cellular and Infection Microbiology.2025;[Epub]     CrossRef
  • Naringenin as a Potent Natural Biofilm Inhibitor of Pseudomonas aeruginosa in Diabetic Foot Ulcers Through lasR Competitive Inhibition
    Anjali Warrier, Kapaettu Satyamoorthy, Thokur Sreepathy Murali
    Current Microbiology.2025;[Epub]     CrossRef
  • In Vitro Analysis of Interactions Between Staphylococcus aureus and Pseudomonas aeruginosa During Biofilm Formation
    Julia Scaffo, Rayssa Durães Lima, Cameron Dobrotka, Tainara A. N. Ribeiro, Renata F. A. Pereira, Daniela Sachs, Rosana B. R. Ferreira, Fabio Aguiar-Alves
    Antibiotics.2025; 14(5): 504.     CrossRef
  • Candida albicans as a Trailblazer for Herpes Simplex Virus-2 Infection Against an In Vitro Reconstituted Human Vaginal Epithelium
    Francesco Ricchi, Stefania Caramaschi, Arianna Sala, Laura Franceschini, Luca Fabbiani, Andrea Ardizzoni, Elisabetta Blasi, Claudio Cermelli
    Microorganisms.2025; 13(4): 905.     CrossRef
  • Pathogenesis of canine leishmaniasis: diagnostic accuracy and experimental models targeting Leishmania lipid-bound vesicles
    Áurea Martins Gabriel, Gilvando Rodrigues Galvão, Adan Galué-Parra, Lívia Medeiros Neves Casseb, Washington Luiz Assunção Pereira, Ketil Winther Pedersen, Delia Cristina Figueira Aguiar, Evonnildo Costa Gonçalves, Edilene Oliveira da Silva
    Academia Biology.2025;[Epub]     CrossRef
  • Pathogen-pathogen interactions during co-infections
    Rosana Barreto Rocha Ferreira, Luis Caetano Martha Antunes, Neta Sal-Man
    The ISME Journal.2025;[Epub]     CrossRef
  • Proteomic study of evolved Pseudomonas aeruginosa strains grown in Staphylococcus aureus - and Klebsiella pneumoniae -conditioned media
    Yanrong Pan, Tin Yan Wong, Jordy Evan Sulaiman, Henry Lam, Alejandra Rodríguez-Verdugo
    mSystems.2025;[Epub]     CrossRef
  • New insights into the role of the additive targeted enzyme inhibitors aminooxyacetic acid and DL-propargylglycine in regulating compost microbial communities
    Ze Deng, Yue Yang, Shan Liu, Zhirui Deng, Yue Zhao, Zimin Wei
    Chemical Engineering Journal.2025; 519: 165368.     CrossRef
  • Infections as ecosystems: community metabolic interactions in microbial pathogenesis
    Aanuoluwa E. Adekoya, Shannon R. West, Sydney K. Arriaga, Carolyn B. Ibberson, Karen M. Ottemann
    Infection and Immunity.2025;[Epub]     CrossRef
  • Extracellular Vesicles Modulate Growth and Stress Adaptation in Fusarium circinatum
    Francinah Ratsoma, Nthabiseng Mokoena, Sokunene Mpupa, Quentin Santana, Brenda Wingfield, Emma Steenkamp, Thabiso Motaung
    Plant Pathology.2025; 74(7): 2121.     CrossRef
  • Antimicrobial management of complex biofilms in diabetic foot ulcers: a microbiological perspective
    Manuela Oliveira, Eva Cunha, Luís Tavares, Isa Serrano
    Expert Review of Anti-infective Therapy.2025; : 1.     CrossRef
  • Host niche-specific challenges hindering the treatment of polymicrobial infections
    Caroline Black, Catherine A. Wakeman, George O'Toole
    Journal of Bacteriology.2025;[Epub]     CrossRef
  • Microbial interactions impact stress tolerance in a model oral community
    Gina R. Lewin, Emma R. Evans, Marvin Whiteley, Varsha Singh
    Microbiology Spectrum.2024;[Epub]     CrossRef
  • Interactions between Pseudomonas aeruginosa and six opportunistic pathogens cover a broad spectrum from mutualism to antagonism
    Clémentine Laffont, Tobias Wechsler, Rolf Kümmerli
    Environmental Microbiology Reports.2024;[Epub]     CrossRef
  • Convergent evolution in toxin detection and resistance provides evidence for conserved bacterial–fungal interactions
    Stephen K. Dolan, Ashley T. Duong, Marvin Whiteley
    Proceedings of the National Academy of Sciences.2024;[Epub]     CrossRef
  • From Global to Nano: A Geographical Perspective of Aggregatibacter actinomycetemcomitans
    Mark I. Ryder, Daniel H. Fine, Annelise E. Barron
    Pathogens.2024; 13(10): 837.     CrossRef
  • Maggots in Medicine: A Narrative Review Discussing the Barriers to Maggot Debridement Therapy and Its Utilisation in the Treatment of Chronic Wounds
    Zoe Mumford, Yamni Nigam
    Journal of Clinical Medicine.2024; 13(22): 6746.     CrossRef
  • Relationship between vaginal and oral microbiome in patients of human papillomavirus (HPV) infection and cervical cancer
    Wei Zhang, Yanfei Yin, Yisha Jiang, Yangyang Yang, Wentao Wang, Xiaoya Wang, Yan Ge, Bin Liu, Lihe Yao
    Journal of Translational Medicine.2024;[Epub]     CrossRef
  • Interplay of virulence factors shapes ecology and treatment outcomes in polymicrobial infections
    C. Herzberg, E.N. van Meegen, J.G.C. van Hasselt
    Mathematical Biosciences.2024; 377: 109293.     CrossRef
  • Competitive inhibition and mutualistic growth in co-infections: deciphering Staphylococcus aureus–Acinetobacter baumannii interaction dynamics
    Sandra Timme, Sindy Wendler, Tilman E Klassert, Joao Pedro Saraiva, Ulisses Nunes da Rocha, Manuel Wittchen, Sareda Schramm, Ralf Ehricht, Stefan Monecke, Birgit Edel, Jürgen Rödel, Bettina Löffler, Maria Soledad Ramirez, Hortense Slevogt, Marc Thilo Figg
    ISME Communications.2024;[Epub]     CrossRef
  • Bacterial community diversity, abundance, and composition of rearing water and red tilapia gills from open river cages and earthen ponds in Central Thailand
    Geraldine B. Dayrit, Mahmoud Mabrok, Sage Chaiyapechara, Channarong Rodkhum
    Aquaculture International.2024; 32(6): 7509.     CrossRef
  • Molecular commensalism—how to investigate underappreciated health-associated polymicrobial communities
    Alex Labossiere, Matthew Ramsey, Justin Merritt, Jens Kreth, Jacob Yount, Jessica A. Scoffield
    mBio.2023;[Epub]     CrossRef
  • Larval Therapy and Larval Excretions/Secretions: A Potential Treatment for Biofilm in Chronic Wounds? A Systematic Review
    Daniel Morris, Micah Flores, Llinos Harris, John Gammon, Yamni Nigam
    Microorganisms.2023; 11(2): 457.     CrossRef
  • A core of functional complementary bacteria infects oysters in Pacific Oyster Mortality Syndrome
    Camille Clerissi, Xing Luo, Aude Lucasson, Shogofa Mortaza, Julien de Lorgeril, Eve Toulza, Bruno Petton, Jean-Michel Escoubas, Lionel Dégremont, Yannick Gueguen, Delphine Destoumieux-Garzόn, Annick Jacq, Guillaume Mitta
    Animal Microbiome.2023;[Epub]     CrossRef
  • Pylephlebitis: A Systematic Review on Etiology, Diagnosis, and Treatment of Infective Portal Vein Thrombosis
    Lisa Fusaro, Stefano Di Bella, Paola Martingano, Lory Saveria Crocè, Mauro Giuffrè
    Diagnostics.2023; 13(3): 429.     CrossRef
  • Responses of microbial interactions and functional genes to sulfamethoxazole in anammox consortia
    Meina Hu, Xiaojing Liu, Shidi Liu, Tao Ya, Minglu Zhang, Tingting Zhang, Xiaoping Gao, Xiaohui Wang
    Journal of Environmental Management.2023; 348: 119408.     CrossRef
  • The interactions of SARS-CoV-2 with cocirculating pathogens: Epidemiological implications and current knowledge gaps
    Anabelle Wong, Laura Andrea Barrero Guevara, Elizabeth Goult, Michael Briga, Sarah C. Kramer, Aleksandra Kovacevic, Lulla Opatowski, Matthieu Domenech de Cellès, Tom C. Hobman
    PLOS Pathogens.2023; 19(3): e1011167.     CrossRef
  • Effect of extracellular levanase SacC from Bacillus subtillis on two–species Staphylococcus aureus – Pseudomonas aeruginosa biofilms
    Guzel Mutallapova, Daria Zhuravleva, Airat Kayumov, Elena Trizna, I. Abdullayev, V. Kukhar, E. Akhmetshin, D. Bekjanov, A. Carballo-Penela
    E3S Web of Conferences.2023; 449: 07016.     CrossRef
  • Cross-protection and cross-feeding between Klebsiella pneumoniae and Acinetobacter baumannii promotes their co-existence
    Lucie Semenec, Amy K. Cain, Catherine J. Dawson, Qi Liu, Hue Dinh, Hannah Lott, Anahit Penesyan, Ram Maharjan, Francesca L. Short, Karl A. Hassan, Ian T. Paulsen
    Nature Communications.2023;[Epub]     CrossRef
  • Microbiota and fungal-bacterial interactions in the cystic fibrosis lung
    Eneko Santos-Fernandez, Leire Martin-Souto, Aitziber Antoran, Maialen Areitio, Leire Aparicio-Fernandez, Jean-Philippe Bouchara, Carsten Schwarz, Aitor Rementeria, Idoia Buldain, Andoni Ramirez-Garcia
    FEMS Microbiology Reviews.2023;[Epub]     CrossRef
  • Defining microbial community functions in chronic human infection with metatranscriptomics
    Aanuoluwa E. Adekoya, Hoody A. Kargbo, Carolyn B. Ibberson, Rachel Poretsky
    mSystems.2023;[Epub]     CrossRef
  • Illuminating the oral microbiome and its host interactions: tools and approaches for molecular microbiology studies
    Justin Merritt, Jens Kreth
    FEMS Microbiology Reviews.2023;[Epub]     CrossRef
  • Cooperation and cheating orchestrate Vibrio assemblages and polymicrobial synergy in oysters infected with OsHV-1 virus
    Daniel Oyanedel, Arnaud Lagorce, Maxime Bruto, Philippe Haffner, Amandine Morot, Yannick Labreuche, Yann Dorant, Sébastien de La Forest Divonne, François Delavat, Nicolas Inguimbert, Caroline Montagnani, Benjamin Morga, Eve Toulza, Cristian Chaparro, Jean
    Proceedings of the National Academy of Sciences.2023;[Epub]     CrossRef
  • Influence of the Type of Bone Cement Used in Two-Stage Exchange Arthroplasty for Chronic Periarticular Joint Infection on the Spacer Replacement and Reinfection Rate
    Meng-Wei Chang, Cheng-Ta Wu, Shih-Hsiang Yen, Timothy L. Tan, Po-Chun Lin, Feng-Chih Kuo
    Journal of Clinical Medicine.2023; 12(2): 600.     CrossRef
  • Fusobacterium nucleatum Metabolically Integrates Commensals and Pathogens in Oral Biofilms
    Akito Sakanaka, Masae Kuboniwa, Shuichi Shimma, Samar A. Alghamdi, Shota Mayumi, Richard J. Lamont, Eiichiro Fukusaki, Atsuo Amano, Heather D. Bean
    mSystems.2022;[Epub]     CrossRef
  • Suppurative Thrombosis of the Portal Vein (Pylephlebits): A Systematic Review of Literature
    Dorde Jevtic, Tatjana Gavrancic, Ivana Pantic, Terri Nordin, Charles W. Nordstrom, Marina Antic, Nikola Pantic, Marija Kaljevic, Bojan Joksimovic, Milan Jovanovic, Emilia Petcu, Mladen Jecmenica, Tamara Milovanovic, Lawrence Sprecher, Igor Dumic
    Journal of Clinical Medicine.2022; 11(17): 4992.     CrossRef
  • Effect of Polymicrobial Interactions on Antimicrobial Resistance: An in vitro Analysis in Human Ocular Infections
    Sanchita Mitra, Aparajita Mallick, Shilpa Priyadarshini
    Future Microbiology.2022; 17(7): 491.     CrossRef
  • Precise spatial structure impacts antimicrobial susceptibility of S. aureus in polymicrobial wound infections
    Carolyn B. Ibberson, Juan P. Barraza, Avery L. Holmes, Pengbo Cao, Marvin Whiteley
    Proceedings of the National Academy of Sciences.2022;[Epub]     CrossRef
  • PECULIARITIES OF DISTRIBUTION OF ANTIBIOTIC RESISTANT STRAINS OF E. COLI - E. FAECALIS ASSOCIATION IN THE UROGENITAL TRACT OF PREGNANT WOMEN
    Olha S. Voronkova, Maksym V. Lusta, Yuliia S. Voronkova, Yelyzaveta S. Fawzy, Tetiana H. Ostanina
    Wiadomości Lekarskie.2022; 75(2): 462.     CrossRef
  • Corncob structures in dental plaque reveal microhabitat taxon specificity
    Viviana Morillo-Lopez, Alexandra Sjaarda, Imon Islam, Gary G. Borisy, Jessica L. Mark Welch
    Microbiome.2022;[Epub]     CrossRef
  • Polymicrobial Infections and Biofilms: Clinical Significance and Eradication Strategies
    V T Anju, Siddhardha Busi, Madangchanok Imchen, Ranjith Kumavath, Mahima S. Mohan, Simi Asma Salim, Pattnaik Subhaswaraj, Madhu Dyavaiah
    Antibiotics.2022; 11(12): 1731.     CrossRef
  • Potential Facilitation Between a Commensal and a Pathogenic Microbe in a Wildlife Disease
    Franziska C. Sandmeier, Kendra L. Leonard, Chava L. Weitzman, C. Richard Tracy
    EcoHealth.2022; 19(3): 427.     CrossRef
  • Increasing the Efficacy of Treatment of Staphylococcus aureus–Candida albicans Mixed Infections with Myrtenol
    Ruba Y. Mahmoud, Elena Y. Trizna, Rand K. Sulaiman, Roman S. Pavelyev, Ilmir R. Gilfanov, Svetlana A. Lisovskaya, Olga V. Ostolopovskaya, Larisa L. Frolova, Alexander V. Kutchin, Galina B. Guseva, Elena V. Antina, Mikhail B. Berezin, Liliya E. Nikitina, A
    Antibiotics.2022; 11(12): 1743.     CrossRef
  • Bacteriological Studies of Venomous Snakebite Wounds in Hangzhou, Southeast China
    Sipin Hu, Zhengqing Lou, Yuchen Shen, Mengyun Tu
    The American Journal of Tropical Medicine and Hygiene.2022; 107(4): 925.     CrossRef
  • Environment Constrains Fitness Advantages of Division of Labor in Microbial Consortia Engineered for Metabolite Push or Pull Interactions
    Ashley E. Beck, Kathryn Pintar, Diana Schepens, Ashley Schrammeck, Timothy Johnson, Alissa Bleem, Martina Du, William R. Harcombe, Hans C. Bernstein, Jeffrey J. Heys, Tomas Gedeon, Ross P. Carlson, Alejandra Rodríguez-Verdugo, Davide Ciccarese
    mSystems.2022;[Epub]     CrossRef
  • Porphyromonas gingivalis Tyrosine Kinase Is a Fitness Determinant in Polymicrobial Infections
    John D. Perpich, Lan Yakoumatos, Kendall S. Stocke, Gina R. Lewin, Anayancy Ramos, Deborah R. Yoder-Himes, Marvin Whiteley, Richard J. Lamont, Andreas J. Bäumler
    Infection and Immunity.2022;[Epub]     CrossRef
  • Priority effects dictate community structure and alter virulence of fungal-bacterial biofilms
    J Z Alex Cheong, Chad J Johnson, Hanxiao Wan, Aiping Liu, John F Kernien, Angela L F Gibson, Jeniel E Nett, Lindsay R Kalan
    The ISME Journal.2021; 15(7): 2012.     CrossRef
  • A Pseudomonas aeruginosa Antimicrobial Affects the Biogeography but Not Fitness of Staphylococcus aureus during Coculture
    Juan P. Barraza, Marvin Whiteley, Dominique H. Limoli, Michael S. Gilmore
    mBio.2021;[Epub]     CrossRef
  • Pseudomonas aeruginosa biofilms and their partners in crime
    Maria del Mar Cendra, Eduard Torrents
    Biotechnology Advances.2021; 49: 107734.     CrossRef
  • Pseudomonas aeruginosa reverse diauxie is a multidimensional, optimized, resource utilization strategy
    S. Lee McGill, Yeni Yung, Kristopher A. Hunt, Michael A. Henson, Luke Hanley, Ross P. Carlson
    Scientific Reports.2021;[Epub]     CrossRef
  • Effect of co-positivity for brucellosis and tuberculosis on milk yield and fertility of Holstein cows
    M. Mellado, N. Treviño, F. G. Véliz, U. Macías-Cruz, L. Avendaño-Reyes, A. de Santiago, J. E. García
    Tropical Animal Health and Production.2021;[Epub]     CrossRef
  • Detection of bacterial fluorescence from in vivo wound biofilms using a point‐of‐care fluorescence imaging device
    Andrea J. Lopez, Laura M. Jones, Landrye Reynolds, Rachel C. Diaz, Isaiah K. George, William Little, Derek Fleming, Anna D'souza, Monique Y. Rennie, Kendra P. Rumbaugh, Allie Clinton Smith
    International Wound Journal.2021; 18(5): 626.     CrossRef
  • Ditylenchus dipsaci and Fusarium oxysporum on garlic: one plus one does not equal two
    Mary Ruth McDonald, Lilieth Ives, Kwasi Adusei-Fosu, Katerina S. Jordan
    Canadian Journal of Plant Pathology.2021; 43(5): 749.     CrossRef
  • Effects of inflammatory stimuli on responses of macrophages to Mycoplasma bovis infection
    Monica Baquero, Ksenia Vulikh, Cassidy Wong, Meghan Domony, DeLenn Burrows, David Marom, Jose Perez-Casal, Hugh Y. Cai, Jeff L. Caswell
    Veterinary Microbiology.2021; 262: 109235.     CrossRef
  • Polymicrobial Interactions in the Urinary Tract: Is the Enemy of My Enemy My Friend?
    Jordan R. Gaston, Alexandra O. Johnson, Kirsten L. Bair, Ashley N. White, Chelsie E. Armbruster, Karen M. Ottemann
    Infection and Immunity.2021;[Epub]     CrossRef
  • Clinical Implications of Polymicrobial Synergism Effects on Antimicrobial Susceptibility
    William Little, Caroline Black, Allie Clinton Smith
    Pathogens.2021; 10(2): 144.     CrossRef
  • Bacterial Interactions with Aspergillus fumigatus in the Immunocompromised Lung
    Anatte Margalit, James C. Carolan, Kevin Kavanagh
    Microorganisms.2021; 9(2): 435.     CrossRef
  • Characterization of Polybacterial versus Monobacterial Conjunctivitis Infections in Pediatric Subjects Across Multiple Studies and Microbiological Outcomes with Besifloxacin Ophthalmic Suspension 0.6%
    Joseph M Blondeau, Howard M Proskin, Christine M Sanfilippo, Heleen H DeCory
    Clinical Ophthalmology.2021; Volume 15: 4419.     CrossRef
  • Prospective assessment of catheter-associated bacteriuria clinical presentation, epidemiology, and colonization dynamics in nursing home residents
    Chelsie E. Armbruster, Aimee L. Brauer, Monica S. Humby, Jiahui Shao, Saptarshi Chakraborty
    JCI Insight.2021;[Epub]     CrossRef
  • Burns and biofilms: priority pathogens and in vivo models
    Evgenia Maslova, Lara Eisaiankhongi, Folke Sjöberg, Ronan R. McCarthy
    npj Biofilms and Microbiomes.2021;[Epub]     CrossRef
  • Genetically Programmable Microbial Assembly
    Mark T. Kozlowski, Bradley R. Silverman, Christopher P. Johnstone, David A. Tirrell
    ACS Synthetic Biology.2021; 10(6): 1351.     CrossRef
  • Hormones Can Influence Antibiotic Susceptibilities Even in Mono- and Co-Culture Conditions
    Fatma Kalaycı-Yüksek, Defne Gümüş, Mine Anğ-Küçüker
    Acta Biologica Marisiensis.2021; 4(2): 39.     CrossRef
  • Synergistic Cues from Diverse Bacteria Enhance Multicellular Development in a Choanoflagellate
    Ella V. Ireland, Arielle Woznica, Nicole King, Eric V. Stabb
    Applied and Environmental Microbiology.2020;[Epub]     CrossRef
  • Cooperation and Conflict Within the Microbiota and Their Effects On Animal Hosts
    Alexandre R. T. Figueiredo, Jos Kramer
    Frontiers in Ecology and Evolution.2020;[Epub]     CrossRef
  • Weakest-Link Dynamics Predict Apparent Antibiotic Interactions in a Model Cross-Feeding Community
    Elizabeth M. Adamowicz, William R. Harcombe
    Antimicrobial Agents and Chemotherapy.2020;[Epub]     CrossRef
  • Pseudomonad reverse carbon catabolite repression, interspecies metabolite exchange, and consortial division of labor
    Heejoon Park, S. Lee McGill, Adrienne D. Arnold, Ross P. Carlson
    Cellular and Molecular Life Sciences.2020; 77(3): 395.     CrossRef
  • Strain Background, Species Frequency, and Environmental Conditions Are Important in Determining Pseudomonas aeruginosa and Staphylococcus aureus Population Dynamics and Species Coexistence
    Selina Niggli, Rolf Kümmerli, Donald W. Schaffner
    Applied and Environmental Microbiology.2020;[Epub]     CrossRef
  • Molecular characteristics and risk factors associated with linezolid-resistant Enterococcus faecalis infection in Southwest China
    Jiaqi Zou, Yun Xia
    Journal of Global Antimicrobial Resistance.2020; 22: 504.     CrossRef
  • From Nursery to Nursing Home: Emerging Concepts in Clostridioides difficile Pathogenesis
    Alexander B. Smith, Joshua Soto Ocana, Joseph P. Zackular, Anthony R. Richardson
    Infection and Immunity.2020;[Epub]     CrossRef
  • Successful treatment of a unique chronic multi-bacterial scalp infection with N-chlorotaurine, N-bromotaurine and bromamine T
    Anthony M. Kyriakopoulos, Markus Nagl, Dorothea Orth-Höller, Janusz Marcinkiewicz, Stella Baliou, Vassilis Zoumbourlis
    Access Microbiology .2020;[Epub]     CrossRef
  • The social life of microbes in chronic infection
    Carolyn B Ibberson, Marvin Whiteley
    Current Opinion in Microbiology.2020; 53: 44.     CrossRef
  • Polymicrobial Biofilm Interaction Between Histophilus somni and Pasteurella multocida
    Briana Petruzzi, Allan Dickerman, Kevin Lahmers, William K. Scarratt, Thomas J. Inzana
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Quantitative Framework for Model Evaluation in Microbiology Research Using Pseudomonas aeruginosa and Cystic Fibrosis Infection as a Test Case
    Daniel M. Cornforth, Frances L. Diggle, Jeffrey A. Melvin, Jennifer M. Bomberger, Marvin Whiteley, Arturo Casadevall
    mBio.2020;[Epub]     CrossRef
  • Harnessing bacterial interactions to manage infections: a review on the opportunistic pathogen Pseudomonas aeruginosa as a case example
    Chiara Rezzoagli, Elisa T. Granato, Rolf Kümmerli
    Journal of Medical Microbiology.2020; 69(2): 147.     CrossRef
  • Comparison of sTREM‐1 and associated periodontal and bacterial factors before/after periodontal therapy, and impact of psychosocial factors
    Marie Dubar, Jean‐Pol Frippiat, Thomas Remen, Amir Boufenzer, Corentine Alauzet, Cedric Baumann, Sebastien Gibot, Catherine Bisson
    Journal of Clinical Periodontology.2020; 47(9): 1064.     CrossRef
  • Cooperative Interactions between Trichomonas vaginalis and Associated Bacteria Enhance Paracellular Permeability of the Cervicovaginal Epithelium by Dysregulating Tight Junctions
    Annabel S. Hinderfeld, Niha Phukan, Ann-Katrein Bär, Anthony M. Roberton, Augusto Simoes-Barbosa, De'Broski R. Herbert
    Infection and Immunity.2019;[Epub]     CrossRef
  • The Structure of Dental Plaque Microbial Communities in the Transition from Health to Dental Caries and Periodontal Disease
    Alex M. Valm
    Journal of Molecular Biology.2019; 431(16): 2957.     CrossRef
  • 2018 international consensus meeting on musculoskeletal infection: Summary from the biofilm workgroup and consensus on biofilm related musculoskeletal infections
    Kordo Saeed, Alex C. McLaren, Edward M. Schwarz, Valentin Antoci, William V. Arnold, Antonia F. Chen, Martin Clauss, Jaime Esteban, Vanya Gant, Edward Hendershot, Noreen Hickok, Carlos A. Higuera, Débora C. Coraça‐Huber, Hyonmin Choe, Jessica A. Jennings,
    Journal of Orthopaedic Research.2019; 37(5): 1007.     CrossRef
  • Antimicrobial resistance three ways: healthcare crisis, major concepts and the relevance of biofilms
    Paula Jorge, Andreia Patrícia Magalhães, Tânia Grainha, Diana Alves, Ana Margarida Sousa, Susana Patrícia Lopes, Maria Olívia Pereira
    FEMS Microbiology Ecology.2019;[Epub]     CrossRef
  • Optimal environmental and culture conditions allow the in vitro coexistence of Pseudomonas aeruginosa and Staphylococcus aureus in stable biofilms
    Maria del Mar Cendra, Núria Blanco-Cabra, Lucas Pedraz, Eduard Torrents
    Scientific Reports.2019;[Epub]     CrossRef
  • In vitro and ex vivo systems at the forefront of infection modeling and drug discovery
    Di Shi, Gujie Mi, Mian Wang, Thomas J. Webster
    Biomaterials.2019; 198: 228.     CrossRef
  • Microbiome Dependent Regulation of Tregs and Th17 Cells in Mucosa
    Pushpa Pandiyan, Natarajan Bhaskaran, Mangge Zou, Elizabeth Schneider, Sangeetha Jayaraman, Jochen Huehn
    Frontiers in Immunology.2019;[Epub]     CrossRef
  • Porphyromonas gingivalis Tyrosine Phosphatase Php1 Promotes Community Development and Pathogenicity
    Young-Jung Jung, Daniel P. Miller, John D. Perpich, Zackary R. Fitzsimonds, Daonan Shen, Jun Ohshima, Richard J. Lamont, Indranil Biswas
    mBio.2019;[Epub]     CrossRef
  • Coinfection with Leishmania major and Staphylococcus aureus enhances the pathologic responses to both microbes through a pathway involving IL-17A
    Tiffany Y. Borbón, Breanna M. Scorza, Gwendolyn M. Clay, Fellipe Lima Nobre de Queiroz, Alan J. Sariol, Jayden L. Bowen, Yani Chen, Bayan Zhanbolat, Corey P. Parlet, Diogo G. Valadares, Suzanne L. Cassel, William M. Nauseef, Alexander R. Horswill, Fayyaz
    PLOS Neglected Tropical Diseases.2019; 13(5): e0007247.     CrossRef
  • A Rare Opportunist, Morganella morganii , Decreases Severity of Polymicrobial Catheter-Associated Urinary Tract Infection
    Brian S. Learman, Aimee L. Brauer, Kathryn A. Eaton, Chelsie E. Armbruster, Marvin Whiteley
    Infection and Immunity.2019;[Epub]     CrossRef
  • Streptococcus gordonii programs epithelial cells to resist ZEB2 induction by Porphyromonas gingivalis
    Jun Ohshima, Qian Wang, Zackary R. Fitzsimonds, Daniel P. Miller, Maryta N. Sztukowska, Young-Jung Jung, Mikako Hayashi, Marvin Whiteley, Richard J. Lamont
    Proceedings of the National Academy of Sciences.2019; 116(17): 8544.     CrossRef
  • The oral microbiota: dynamic communities and host interactions
    Richard J. Lamont, Hyun Koo, George Hajishengallis
    Nature Reviews Microbiology.2018; 16(12): 745.     CrossRef
  • Role of Short Chain Fatty Acids in Controlling Tregs and Immunopathology During Mucosal Infection
    Natarajan Bhaskaran, Cheriese Quigley, Clarissa Paw, Shivani Butala, Elizabeth Schneider, Pushpa Pandiyan
    Frontiers in Microbiology.2018;[Epub]     CrossRef
  • Cross-feeding modulates antibiotic tolerance in bacterial communities
    Elizabeth M Adamowicz, Jeffrey Flynn, Ryan C Hunter, William R Harcombe
    The ISME Journal.2018; 12(11): 2723.     CrossRef
  • Molecular Identification of Bacteria in Intra-abdominal Abscesses Using Deep Sequencing
    Andrew Kozlov, Lorenzo Bean, Emilie V Hill, Lisa Zhao, Eric Li, Gary P Wang
    Open Forum Infectious Diseases.2018;[Epub]     CrossRef
  • Options and Limitations in Clinical Investigation of Bacterial Biofilms
    Maria Magana, Christina Sereti, Anastasios Ioannidis, Courtney A. Mitchell, Anthony R. Ball, Emmanouil Magiorkinis, Stylianos Chatzipanagiotou, Michael R. Hamblin, Maria Hadjifrangiskou, George P. Tegos
    Clinical Microbiology Reviews.2018;[Epub]     CrossRef
  • Mutations in bacterial genes induce unanticipated changes in the relationship between bacterial pathogens in experimental otitis media
    Vinal Lakhani, Li Tan, Sayak Mukherjee, William C. L. Stewart, W. Edward Swords, Jayajit Das
    Royal Society Open Science.2018; 5(11): 180810.     CrossRef
  • Acclimation of Culturable Bacterial Communities under the Stresses of Different Organic Compounds
    Hui Wang, Shuangfei Zhang, Amit Pratush, Xueying Ye, Jinli Xie, Huan Wei, Chongran Sun, Zhong Hu
    Frontiers in Microbiology.2018;[Epub]     CrossRef
  • Effects of Growth Surface Topography on Bacterial Signaling in Coculture Biofilms
    Arunima Bhattacharjee, Mughees Khan, Maya Kleiman, Allon I. Hochbaum
    ACS Applied Materials & Interfaces.2017; 9(22): 18531.     CrossRef
  • In vitro microbicidal, anti‐biofilm and cytotoxic effects of different commercial antiseptics
    Silvestre Ortega‐Peña, Christian Hidalgo‐González, Martin C Robson, Edgar Krötzsch
    International Wound Journal.2017; 14(3): 470.     CrossRef
  • Pseudomonas aeruginosa Contact-Dependent Growth Inhibition Plays Dual Role in Host-Pathogen Interactions
    Jeffrey A. Melvin, Jordan R. Gaston, Shawn N. Phillips, Michael J. Springer, Christopher W. Marshall, Robert M. Q. Shanks, Jennifer M. Bomberger, Sarah E. F. D'Orazio
    mSphere.2017;[Epub]     CrossRef
  • Fungal Biofilms and Polymicrobial Diseases
    Caroline Costa-Orlandi, Janaina Sardi, Nayla Pitangui, Haroldo De Oliveira, Liliana Scorzoni, Mariana Galeane, Kaila Medina-Alarcón, Wanessa Melo, Mônica Marcelino, Jaqueline Braz, Ana Fusco-Almeida, Maria Mendes-Giannini
    Journal of Fungi.2017; 3(2): 22.     CrossRef
  • Discovery of Small Molecules as Multi-Toll-like Receptor Agonists with Proinflammatory and Anticancer Activities
    Lei Zhang, Varun Dewan, Hang Yin
    Journal of Medicinal Chemistry.2017; 60(12): 5029.     CrossRef
  • Potentiation and tolerance of toll-like receptor priming in human endothelial cells
    Stephen R. Koch, Fred S. Lamb, Judith Hellman, Edward R. Sherwood, Ryan J. Stark
    Translational Research.2017; 180: 53.     CrossRef
  • Albumin Inhibits Pseudomonas aeruginosa Quorum Sensing and Alters Polymicrobial Interactions
    Allie Clinton Smith, Anne Rice, Bryan Sutton, Rebecca Gabrilska, Aimee K. Wessel, Marvin Whiteley, Kendra P. Rumbaugh, Beth McCormick
    Infection and Immunity.2017;[Epub]     CrossRef
  • Microbiota Analysis of Biofilms on Experimental Abutments Mimicking Dental Implants: An In Vivo Model
    Berta Cortés‐Acha, Rui Figueiredo, Ramón Seminago, Francisco J. Roig, Carlos Llorens, Eduard Valmaseda‐Castellón
    Journal of Periodontology.2017; 88(10): 1090.     CrossRef
  • Identification by highly sensitive 16S metagenomic sequencing of an unusual case of polymicrobial bacteremia
    Benjamin Lelouvier, Florence Servant, Pierre Delobel, Michael Courtney, Meyer Elbaz, Jacques Amar
    Journal of Infection.2017; 75(3): 278.     CrossRef
  • Metabolic crosstalk regulates Porphyromonas gingivalis colonization and virulence during oral polymicrobial infection
    Masae Kuboniwa, John R. Houser, Erik L. Hendrickson, Qian Wang, Samar A. Alghamdi, Akito Sakanaka, Daniel P. Miller, Justin A. Hutcherson, Tiansong Wang, David A. C. Beck, Marvin Whiteley, Atsuo Amano, Huizhi Wang, Edward M. Marcotte, Murray Hackett, Rich
    Nature Microbiology.2017; 2(11): 1493.     CrossRef
  • Rapid susceptibility profiling of carbapenem-resistant Klebsiella pneumoniae
    K. T. Mulroney, J. M. Hall, X. Huang, E. Turnbull, N. M. Bzdyl, A. Chakera, U. Naseer, E. M. Corea, M. J. Ellington, K. L. Hopkins, A. L. Wester, O. Ekelund, N. Woodford, T. J. J. Inglis
    Scientific Reports.2017;[Epub]     CrossRef
  • Dancing with the Stars: How Choreographed Bacterial Interactions Dictate Nososymbiocity and Give Rise to Keystone Pathogens, Accessory Pathogens, and Pathobionts
    George Hajishengallis, Richard J. Lamont
    Trends in Microbiology.2016; 24(6): 477.     CrossRef
  • Resource limitation drives spatial organization in microbial groups
    Sara Mitri, Ellen Clarke, Kevin R Foster
    The ISME Journal.2016; 10(6): 1471.     CrossRef
  • Hydrogen peroxide is a central determinant of oral polymicrobial synergy
    Richard J. Lamont
    Environmental Microbiology.2016; 18(11): 3609.     CrossRef
  • Interactions between Pseudomonas aeruginosa and Staphylococcus aureus during co-cultivations and polymicrobial infections
    Angela T. Nguyen, Amanda G. Oglesby-Sherrouse
    Applied Microbiology and Biotechnology.2016; 100(14): 6141.     CrossRef
  • Cyanide Toxicity to Burkholderia cenocepacia Is Modulated by Polymicrobial Communities and Environmental Factors
    Steve P. Bernier, Matthew L. Workentine, Xiang Li, Nathan A. Magarvey, George A. O'Toole, Michael G. Surette
    Frontiers in Microbiology.2016;[Epub]     CrossRef
  • 16S rRNA analysis provides evidence of biofilms on all components of three infected periprosthetic knees including permanent braided suture
    Matthew C. Swearingen, Alex C. DiBartola, Devendra Dusane, Jeffrey Granger, Paul Stoodley, Thomas Bjarnsholt
    Pathogens and Disease.2016; 74(7): ftw083.     CrossRef
  • A Commensal Bacterium Promotes Virulence of an Opportunistic Pathogen via Cross-Respiration
    Apollo Stacy, Derek Fleming, Richard J. Lamont, Kendra P. Rumbaugh, Marvin Whiteley, Michael S. Gilmore, Vanessa Sperandio, Donald Demuth
    mBio.2016;[Epub]     CrossRef
  • Fusobacterium nucleatum infections: clinical spectrum and bacteriological features of 78 cases
    E. Denes, O. Barraud
    Infection.2016; 44(4): 475.     CrossRef
  • The biogeography of polymicrobial infection
    Apollo Stacy, Luke McNally, Sophie E. Darch, Sam P. Brown, Marvin Whiteley
    Nature Reviews Microbiology.2016; 14(2): 93.     CrossRef
  • Do Polymicrobial Intra-Abdominal Infections Have Worse Outcomes than Monomicrobial Intra-Abdominal Infections?
    Puja M. Shah, Brandy L. Edwards, Zachary C. Dietch, Christopher A. Guidry, Stephen W. Davies, Sara A. Hennessy, Therese M. Duane, Patrick J. O'Neill, Raul Coimbra, Charles H. Cook, Reza Askari, Kimberly Popovsky, Robert G. Sawyer
    Surgical Infections.2016; 17(1): 27.     CrossRef
  • Stochastic Assembly of Bacteria in Microwell Arrays Reveals the Importance of Confinement in Community Development
    Ryan H. Hansen, Andrea C. Timm, Collin M. Timm, Amber N. Bible, Jennifer L. Morrell-Falvey, Dale A. Pelletier, Michael L. Simpson, Mitchel J. Doktycz, Scott T. Retterer, Xiangzhen Li
    PLOS ONE.2016; 11(5): e0155080.     CrossRef
  • Study of the growth of Enterococcus faecalis, Escherichia coli and their mixtures by microcalorimetry
    C. Vazquez, N. Lago, M. M. Mato, L. Esarte, J. L. Legido
    Journal of Thermal Analysis and Calorimetry.2016; 125(2): 739.     CrossRef
  • Let there be bioluminescence: development of a biophotonic imaging platform for in situ analyses of oral biofilms in animal models
    Justin Merritt, Hidenobu Senpuku, Jens Kreth
    Environmental Microbiology.2016; 18(1): 174.     CrossRef
  • The cystic fibrosis microbiome in an ecological perspective and its impact in antibiotic therapy
    Andreia P. Magalhães, Nuno F. Azevedo, Maria O. Pereira, Susana P. Lopes
    Applied Microbiology and Biotechnology.2016; 100(3): 1163.     CrossRef
  • Individuality, phenotypic differentiation, dormancy and ‘persistence’ in culturable bacterial systems: commonalities shared by environmental, laboratory, and clinical microbiology
    Douglas Kell, Marnie Potgieter, Etheresia Pretorius
    F1000Research.2015; 4: 179.     CrossRef
  • Iron-Mediated Control of Pseudomonas aeruginosa-Staphylococcus aureus Interactions in the Cystic Fibrosis Lung
    Patricia M. Barnabie, Marvin Whiteley, V. J. DiRita
    Journal of Bacteriology.2015; 197(14): 2250.     CrossRef
  • Polymicrobial Infective Endocarditis
    Pablo Elpidio García-Granja, Javier López, Isidre Vilacosta, Carlos Ortiz-Bautista, Teresa Sevilla, Carmen Olmos, Cristina Sarriá, Carlos Ferrera, Itziar Gómez, José Alberto San Román
    Medicine.2015; 94(49): e2000.     CrossRef
  • Mass spectrometry tools and workflows for revealing microbial chemistry
    Tal Luzzatto-Knaan, Alexey V. Melnik, Pieter C. Dorrestein
    The Analyst.2015; 140(15): 4949.     CrossRef
  • Solving the etiology of dental caries
    Aurea Simón-Soro, Alex Mira
    Trends in Microbiology.2015; 23(2): 76.     CrossRef
  • Individuality, phenotypic differentiation, dormancy and ‘persistence’ in culturable bacterial systems: commonalities shared by environmental, laboratory, and clinical microbiology
    Douglas Kell, Marnie Potgieter, Etheresia Pretorius
    F1000Research.2015; 4: 179.     CrossRef
  • Pseudomonas aeruginosa adaptation to human hosts
    Evan S Snitkin, Julia A Segre
    Nature Genetics.2015; 47(1): 2.     CrossRef
  • Biofilm Models of Polymicrobial Infection
    Rebecca A Gabrilska, Kendra P Rumbaugh
    Future Microbiology.2015; 10(12): 1997.     CrossRef
  • The Limitations of In Vitro Experimentation in Understanding Biofilms and Chronic Infection
    Aled E.L. Roberts, Kasper N. Kragh, Thomas Bjarnsholt, Stephen P. Diggle
    Journal of Molecular Biology.2015; 427(23): 3646.     CrossRef
  • Mass spectrometric metabolomic imaging of biofilms on corroding steel surfaces using laser ablation and solvent capture by aspiration
    Jonathan I. Brauer, Zakari Makama, Vincent Bonifay, Egemen Aydin, Eric D. Kaufman, Iwona B. Beech, Jan Sunner
    Biointerphases.2015;[Epub]     CrossRef
  • Spoils of war: iron at the crux of clinical and ecological fitness of Pseudomonas aeruginosa
    Angela T. Nguyen, Amanda G. Oglesby-Sherrouse
    BioMetals.2015; 28(3): 433.     CrossRef
  • Biotic inactivation of the Pseudomonas aeruginosa quinolone signal molecule
    Eliza Ye‐Chen Soh, Siri R. Chhabra, Nigel Halliday, Stephan Heeb, Christine Müller, Franziska S. Birmes, Susanne Fetzner, Miguel Cámara, Kok‐Gan Chan, Paul Williams
    Environmental Microbiology.2015; 17(11): 4352.     CrossRef
  • The Upper Respiratory Tract as a Microbial Source for Pulmonary Infections in Cystic Fibrosis. Parallels from Island Biogeography
    Katrine L. Whiteson, Barbara Bailey, Megan Bergkessel, Douglas Conrad, Laurence Delhaes, Ben Felts, J. Kirk Harris, Ryan Hunter, Yan Wei Lim, Heather Maughan, Robert Quinn, Peter Salamon, James Sullivan, Brandie D. Wagner, Paul B. Rainey
    American Journal of Respiratory and Critical Care Medicine.2014; 189(11): 1309.     CrossRef
  • Molecular microbiology in antibacterial research
    You-Hee Cho
    Journal of Microbiology.2014; 52(3): 185.     CrossRef
  • Reducing the bioactivity of Tannerella forsythia lipopolysaccharide by Porphyromonas gingivalis
    Young-Jae Kim, Sung-Hoon Lee
    Journal of Microbiology.2014; 52(8): 702.     CrossRef
REVIEW] When a Virus is not a Parasite: The Beneficial Effects of Prophages
Joseph Bondy-Denomy , Alan R. Davidson
J. Microbiol. 2014;52(3):235-242.   Published online March 1, 2014
DOI: https://doi.org/10.1007/s12275-014-4083-3
  • 406 View
  • 1 Download
  • 134 Crossref
AbstractAbstract PDF
Most organisms on the planet have viruses that infect them. Viral infection may lead to cell death, or to a symbiotic relationship where the genomes of both virus and host replicate together. In the symbiotic state, both virus and cell potentially experience increased fitness as a result of the other. The viruses that infect bacteria, called bacteriophages (or phages), well exemplify the symbiotic relationships that can develop between viruses and their host. In this review, we will discuss the many ways that prophages, which are phage genomes integrated into the genomes of their hosts, influence bacterial behavior and virulence.

Citations

Citations to this article as recorded by  
  • Prophage-encoded chitinase gene supports growth of its bacterial host isolated from deep-sea sediments
    Mathias Middelboe, Sachia J Traving, Daniel Castillo, Panos G Kalatzis, Ronnie N Glud
    The ISME Journal.2025;[Epub]     CrossRef
  • Population structure and gene flux of Listeria monocytogenes ST121 reveal prophages as a candidate driver of adaptation and persistence in food production environments
    Ana Victoria Gutiérrez, Michaela Matthews, Maria Diaz, Thanh Le Viet, Leonardo de Oliveira Martins, Frieda Jørgensen, Heather Aird, Anaïs Painset, Nicolle Som, Oleksii Omelchenko, Evelien M. Adriaenssens, Robert A. Kingsley, Matthew W. Gilmour
    Microbial Genomics .2025;[Epub]     CrossRef
  • Large-scale analysis of predicted phages in 1497 Lactiplantibacillus plantarum strains - Unveiling the functional diversity and conservation of prophage genomes
    Ruirui Lv, Wenxin Ma, Runze Liu, Yingtong Chen, Luyao Wang, Xia Chen
    LWT.2025; 216: 117334.     CrossRef
  • Current understanding of the Streptococcus bovis/equinus complex and its bacteriophages in ruminants: a review
    Seon Young Park, Seongwon Seo, Ji Hyung Kim
    Frontiers in Veterinary Science.2025;[Epub]     CrossRef
  • Know Your Enemy: Piscirickettsia salmonis and Phage Interactions Using an In Silico Perspective
    Carolina Ramírez, Jaime Romero
    Antibiotics.2025; 14(6): 558.     CrossRef
  • Provirus deletion from Haloferax volcanii affects motility, stress resistance, and CRISPR RNA expression
    Nadia Di Cianni, Simon Bolsinger, Jutta Brendel, Monika Raabe, Sabine König, Laura Mitchell, Thorsten Bischler, Tom Gräfenhan, Clarissa Read, Susanne Erdmann, Thorsten Allers, Paul Walther, Henning Urlaub, Mike Dyall-Smith, Friedhelm Pfeiffer, Anita March
    microLife.2025;[Epub]     CrossRef
  • Eco-evolutionary dynamics of temperate phages in periodic environments
    Tapan Goel, Stephen J Beckett, Joshua S Weitz
    Virus Evolution.2025;[Epub]     CrossRef
  • Insights into diversity, host-range, and temporal stability of Bacteroides and Phocaeicola prophages
    Nejc Stopnisek, Stina Hedžet, Tomaž Accetto, Maja Rupnik
    BMC Microbiology.2025;[Epub]     CrossRef
  • Pangenomics to understand prophage dynamics in the Pectobacterium genus and the radiating lineages of Pectobacterium brasiliense
    Lakhansing A. Pardeshi, Inge van Duivenbode, Michiel J.C. Pel, Eef M. Jonkheer, Anne Kupczok, Dick de Ridder, Sandra Smit, Theo A. J. van der Lee
    Microbial Genomics .2025;[Epub]     CrossRef
  • Genomic analysis and lysogenic conversion of novel RAP44-like phages in Riemerella anatipestifer
    Junxuan Zhang, Xiaolu He, Jinzhen Hao, Yefan Wang, Jinyang Su, Xiaoxin Chen, Liying Deng, Yizhang Zheng, Zixing Guo, Mianzhi Wang, Yongxue Sun
    Poultry Science.2025; 104(8): 105268.     CrossRef
  • Draft genome sequence and comparative genomic analysis of Halomonas salifodinae strain A2 isolated from the Zapotitlán Salinas Valley, Puebla, Mexico
    Alberto León-Lemus, Martha Martínez-García, Nathalie Cabirol, Jorge E. Campos, Alejandro Monsalvo-Reyes
    Extremophiles.2025;[Epub]     CrossRef
  • Obligate intracellular bacterial pathogens as major players in the metabolic integration of organelles
    Steven Ball, Denis Baurain, Marie Leleu, Ingrid Lafontaine, Ugo Cenci, Christophe Colleoni, Olivier Vallon, Gilbert Greub, Andreas Weber, Debashish Bhattacharya
    Comptes Rendus. Biologies.2025; 348(G1): 107.     CrossRef
  • Structure of the virulence-associated Neisseria meningitidis filamentous bacteriophage MDAΦ
    Jan Böhning, Miles Graham, Mathieu Coureuil, Abul K. Tarafder, Julie Meyer, Xavier Nassif, Emmanuelle Bille, Tanmay A. M. Bharat
    Proceedings of the National Academy of Sciences.2025;[Epub]     CrossRef
  • De novo gene birth and the conundrum of ORFan genes in bacteria
    Md. Hassan uz-Zaman, Howard Ochman
    Genome Research.2025; 35(8): 1679.     CrossRef
  • Phage against the Machine: The SIE-ence of Superinfection Exclusion
    Michael J. Bucher, Daniel M. Czyż
    Viruses.2024; 16(9): 1348.     CrossRef
  • Molecular characteristics, fitness, and virulence of high-risk and non-high-risk clones of carbapenemase-producing Klebsiella pneumoniae
    Anni-Maria Örmälä-Tiznado, Lisa Allander, Makaoui Maatallah, Muhammad Humaun Kabir, Sylvain Brisse, Linus Sandegren, Sheetal Patpatia, Maarten Coorens, Christian G. Giske, Daria Van Tyne
    Microbiology Spectrum.2024;[Epub]     CrossRef
  • Lytic/Lysogenic Transition as a Life-History Switch
    Joan Roughgarden
    Virus Evolution.2024;[Epub]     CrossRef
  • Presence of phage-plasmids in multiple serovars of Salmonella enterica
    Satheesh Nair, Clare R. Barker, Matthew Bird, David R. Greig, Caitlin Collins, Anaïs Painset, Marie Chattaway, Derek Pickard, Lesley Larkin, Saheer Gharbia, Xavier Didelot, Paolo Ribeca
    Microbial Genomics .2024;[Epub]     CrossRef
  • Snow viruses and their implications on red snow algal blooms
    Adam R. Barno, Kevin Green, Forest Rohwer, Cynthia B. Silveira, Katrine Whiteson
    mSystems.2024;[Epub]     CrossRef
  • Prophages carrying Zot toxins on different Vibrio genomes: A comprehensive assessment using multilayer networks
    Esteban F. Soto, Melissa Alegría, Felipe Sepúlveda, Katherine García, Gastón Higuera, Daniel Castillo, Francisco E. Fontúrbel, Roberto Bastías
    Environmental Microbiology.2024;[Epub]     CrossRef
  • Investigating the viral ecology and contribution to the microbial ecology in full-scale mesophilic anaerobic digesters
    Bishav Bhattarai, Ananda Shankar Bhattacharjee, Felipe H. Coutinho, Ramesh Goel
    Chemosphere.2024; 349: 140743.     CrossRef
  • Soybean Bradyrhizobium spp. Spontaneously Produce Abundant and Diverse Temperate Phages in Culture
    Vanessa A. Richards, Barbra D. Ferrell, Shawn W. Polson, K. Eric Wommack, Jeffry J. Fuhrmann
    Viruses.2024; 16(11): 1750.     CrossRef
  • Diverse Prophage Elements of Salmonella enterica Serovars Show Potential Roles in Bacterial Pathogenicity
    Kirstie Andrews, Toby Landeryou, Thomas Sicheritz-Pontén, Janet Yakubu Nale
    Cells.2024; 13(6): 514.     CrossRef
  • The prophage-encoded transcriptional regulator AppY has pleiotropic effects on E. coli physiology
    Naoual Derdouri, Nicolas Ginet, Yann Denis, Mireille Ansaldi, Aurélia Battesti, Melanie Blokesch
    PLOS Genetics.2023; 19(3): e1010672.     CrossRef
  • Improving phage therapy by evasion of phage resistance mechanisms
    Inés Bleriot, Olga Pacios, Lucia Blasco, Laura Fernández-García, María López, Concha Ortiz-Cartagena, Antonio Barrio-Pujante, Rodolfo García-Contreras, Jean-Paul Pirnay, Thomas K Wood, María Tomás
    JAC-Antimicrobial Resistance.2023;[Epub]     CrossRef
  • A systematic analysis of marine lysogens and proviruses
    Yi Yi, Shunzhang Liu, Yali Hao, Qingyang Sun, Xinjuan Lei, Yecheng Wang, Jiahua Wang, Mujie Zhang, Shan Tang, Qingxue Tang, Yue Zhang, Xipeng Liu, Yinzhao Wang, Xiang Xiao, Huahua Jian
    Nature Communications.2023;[Epub]     CrossRef
  • Investigation of Potassium Tetraborate Resistance in Dickeya spp.
    Alice Lou
    Cornell Undergraduate Research Journal.2023; 2(1): 28.     CrossRef
  • Competition between lysogenic and sensitive bacteria is determined by the fitness costs of the different emerging phage-resistance strategies
    Olaya Rendueles, Jorge AM de Sousa, Eduardo PC Rocha
    eLife.2023;[Epub]     CrossRef
  • Two novel Bartonella (sub)species isolated from edible dormice (Glis glis): hints of cultivation stress-induced genomic changes
    Oldřich Bartoš, Běla Klimešová, Karolina Volfová, Martin Chmel, Jiří Dresler, Petr Pajer, Hana Kabíčková, Peter Adamík, David Modrý, Alena Myslivcová Fučíková, Jan Votýpka
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Systematic analysis of prophage elements in actinobacterial genomes reveals a remarkable phylogenetic diversity
    Vikas Sharma, Max Hünnefeld, Tom Luthe, Julia Frunzke
    Scientific Reports.2023;[Epub]     CrossRef
  • Occurrence and genetic diversity of prophage sequences identified in the genomes of L. casei group bacteria
    Piotr Jarocki, Elwira Komoń-Janczara, Agata Młodzińska, Jan Sadurski, Kinga Kołodzińska, Łukasz Łaczmański, Jacek Panek, Magdalena Frąc
    Scientific Reports.2023;[Epub]     CrossRef
  • Novel virulent and temperate cyanophages predicted to infect Microcoleus associated with anatoxin‐producing benthic mats
    Cecilio Valadez‐Cano, Adrian Reyes‐Prieto, Janice Lawrence
    Environmental Microbiology.2023; 25(12): 3319.     CrossRef
  • Bio-informatic analysis of CRISPR protospacer adjacent motifs (PAMs) in T4 genome
    Omar Rawashdeh, Rabeah Y. Rawashdeh, Temesgen Kebede, David Kapp, Anca Ralescu
    BMC Genomic Data.2022;[Epub]     CrossRef
  • Insights into Gene Transcriptional Regulation of Kayvirus Bacteriophages Obtained from Therapeutic Mixtures
    Sara Arroyo-Moreno, Colin Buttimer, Francesca Bottacini, Nina Chanishvili, Paul Ross, Colin Hill, Aidan Coffey
    Viruses.2022; 14(3): 626.     CrossRef
  • Prevalence, Diversity and UV-Light Inducibility Potential of Prophages in Bacillus subtilis and Their Possible Roles in Host Properties
    Haftom Baraki Abraha, Youbin Choi, Woobin Hyun, Jae-Won Lee, Hai Seong Kang, Min Seo So, Donghyun Shin, Jong-Hyun Jung, Desta Berhe Sbhatu, Kwang-Pyo Kim
    Viruses.2022; 14(3): 483.     CrossRef
  • The Life Cycle Transitions of Temperate Phages: Regulating Factors and Potential Ecological Implications
    Menghui Zhang, Tianyou Zhang, Meishun Yu, Yu-Lei Chen, Min Jin
    Viruses.2022; 14(9): 1904.     CrossRef
  • Accelerated Evolution by Diversity-Generating Retroelements
    Benjamin R. Macadangdang, Sara K. Makanani, Jeff F. Miller
    Annual Review of Microbiology.2022; 76(1): 389.     CrossRef
  • Prophage: a crucial catalyst in infectious disease modulation
    Roshan Nepal, Ghais Houtak, Peter-John Wormald, Alkis James Psaltis, Sarah Vreugde
    The Lancet Microbe.2022; 3(3): e162.     CrossRef
  • Isolation of a virus causing a chronic infection in the archaeal model organism Haloferax volcanii reveals antiviral activities of a provirus
    Tomas Alarcón-Schumacher, Adit Naor, Uri Gophna, Susanne Erdmann
    Proceedings of the National Academy of Sciences.2022;[Epub]     CrossRef
  • Anti-CRISPR proteins as a therapeutic agent against drug-resistant bacteria
    Pallavi Vyas, Harish
    Microbiological Research.2022; 257: 126963.     CrossRef
  • Detection of an IMI-2 carbapenemase-producing Enterobacter asburiae at a Swedish feed mill
    Stefan Börjesson, Michael S. M. Brouwer, Emma Östlund, Jenny Eriksson, Josefine Elving, Oskar Karlsson Lindsjö, Linda I. Engblom
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Host life-history traits influence the distribution of prophages and the genes they carry
    Tyler Pattenden, Christine Eagles, Lindi M. Wahl
    Philosophical Transactions of the Royal Society B: Biological Sciences.2022;[Epub]     CrossRef
  • Killing the competition: a theoretical framework for liver-stage malaria
    Clemente F. Arias, Francisco J. Acosta, Cristina Fernandez-Arias
    Open Biology.2022;[Epub]     CrossRef
  • Analysis of intact prophages in genomes of Paenibacillus larvae: An important pathogen for bees
    Henrique G. Ribeiro, Anna Nilsson, Luís D. R. Melo, Ana Oliveira
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Landscape of mobile genetic elements and their antibiotic resistance cargo in prokaryotic genomes
    Supriya Khedkar, Georgy Smyshlyaev, Ivica Letunic, Oleksandr M Maistrenko, Luis Pedro Coelho, Askarbek Orakov, Sofia K Forslund, Falk Hildebrand, Mechthild Luetge, Thomas S B Schmidt, Orsolya Barabas, Peer Bork
    Nucleic Acids Research.2022; 50(6): 3155.     CrossRef
  • Comparative genome analysis of Vagococcus fluvialis reveals abundance of mobile genetic elements in sponge-isolated strains
    Ana Rodriguez Jimenez, Nadège Guiglielmoni, Lise Goetghebuer, Etienne Dechamps, Isabelle F. George, Jean-François Flot
    BMC Genomics.2022;[Epub]     CrossRef
  • Higher phage virulence accelerates the evolution of host resistance
    Carolin C. Wendling, Janina Lange, Heiko Liesegang, Michael Sieber, Anja Poehlein, Boyke Bunk, Jelena Rajkov, Henry Goehlich, Olivia Roth, Michael A. Brockhurst
    Proceedings of the Royal Society B: Biological Sciences.2022;[Epub]     CrossRef
  • An overview on Vibrio temperate phages: Integration mechanisms, pathogenicity, and lysogeny regulation
    Zaatout Nawel, Ouchene Rima, Bouaziz Amira
    Microbial Pathogenesis.2022; 165: 105490.     CrossRef
  • Selective Isolation of Eggerthella lenta from Human Faeces and Characterisation of the Species Prophage Diversity
    Colin Buttimer, Francesca Bottacini, Andrey N. Shkoporov, Lorraine A. Draper, Paul Ross, Colin Hill
    Microorganisms.2022; 10(1): 195.     CrossRef
  • Mutualistic interplay between bacteriophages and bacteria in the human gut
    Andrey N. Shkoporov, Christopher J. Turkington, Colin Hill
    Nature Reviews Microbiology.2022; 20(12): 737.     CrossRef
  • Competition Between Phage-Resistance Mechanisms Determines the Outcome of Bacterial Co-Existence
    Olaya Rendueles, Jorge A.M. de Sousa, Eduardo P.C. Rocha
    SSRN Electronic Journal .2022;[Epub]     CrossRef
  • Viruses in Subsurface Environments
    Jennifer Wirth, Mark Young
    Annual Review of Virology.2022; 9(1): 99.     CrossRef
  • Genomic Analysis Unveils the Pervasiveness and Diversity of Prophages Infecting Erwinia Species
    Tulio Morgan, Rafael Reis de Rezende, Thamylles Thuany Mayrink Lima, Flávia de Oliveira Souza, Poliane Alfenas-Zerbini
    Pathogens.2022; 12(1): 44.     CrossRef
  • Engineered Bacteriophage Therapeutics: Rationale, Challenges and Future
    Małgorzata Łobocka, Krystyna Dąbrowska, Andrzej Górski
    BioDrugs.2021; 35(3): 255.     CrossRef
  • Fitness benefits to bacteria of carrying prophages and prophage‐encoded antibiotic‐resistance genes peak in different environments
    Carolin C. Wendling, Dominik Refardt, Alex R. Hall
    Evolution.2021; 75(2): 515.     CrossRef
  • Towards the Characterization and Engineering of Bacteriophages in the Gut Microbiome
    Bryan B. Hsu
    mSystems.2021;[Epub]     CrossRef
  • Bacteriophages as drivers of bacterial virulence and their potential for biotechnological exploitation
    Kaat Schroven, Abram Aertsen, Rob Lavigne
    FEMS Microbiology Reviews.2021;[Epub]     CrossRef
  • Temperate Bacteriophages—The Powerful Indirect Modulators of Eukaryotic Cells and Immune Functions
    Martyna Cieślik, Natalia Bagińska, Ewa Jończyk-Matysiak, Alicja Węgrzyn, Grzegorz Węgrzyn, Andrzej Górski
    Viruses.2021; 13(6): 1013.     CrossRef
  • Extending the natural adaptive capacity of coral holobionts
    Christian R. Voolstra, David J. Suggett, Raquel S. Peixoto, John E. Parkinson, Kate M. Quigley, Cynthia B. Silveira, Michael Sweet, Erinn M. Muller, Daniel J. Barshis, David G. Bourne, Manuel Aranda
    Nature Reviews Earth & Environment.2021; 2(11): 747.     CrossRef
  • Revisiting the rules of life for viruses of microorganisms
    Adrienne M. S. Correa, Cristina Howard-Varona, Samantha R. Coy, Alison Buchan, Matthew B. Sullivan, Joshua S. Weitz
    Nature Reviews Microbiology.2021; 19(8): 501.     CrossRef
  • The landscape of lysogeny across microbial community density, diversity and energetics
    Cynthia B. Silveira, Antoni Luque, Forest Rohwer
    Environmental Microbiology.2021; 23(8): 4098.     CrossRef
  • Exploring Codon Adjustment Strategies towards Escherichia coli-Based Production of Viral Proteins Encoded by HTH1, a Novel Prophage of the Marine Bacterium Hypnocyclicus thermotrophus
    Hasan Arsın, Andrius Jasilionis, Håkon Dahle, Ruth-Anne Sandaa, Runar Stokke, Eva Nordberg Karlsson, Ida Helene Steen
    Viruses.2021; 13(7): 1215.     CrossRef
  • Stable Neutralization of a Virulence Factor in Bacteria Using Temperate Phage in the Mammalian Gut
    Bryan B. Hsu, Jeffrey C. Way, Pamela A. Silver, Jack A. Gilbert
    mSystems.2020;[Epub]     CrossRef
  • RETRACTED ARTICLE: Cryptic prophages in a blaNDM-1-bearing plasmid increase bacterial survival against high NaCl concentration, high and low temperatures, and oxidative and immunological stressors
    So Yeon Kim, Kwan Soo Ko
    Journal of Microbiology.2020; 58(6): 483.     CrossRef
  • The Russian Doll Model: How Bacteria Shape Successful and Sustainable Inter-Kingdom Relationships
    Enrica Pessione
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • In situ reprogramming of gut bacteria by oral delivery
    Bryan B. Hsu, Isaac N. Plant, Lorena Lyon, Frances M. Anastassacos, Jeffrey C. Way, Pamela A. Silver
    Nature Communications.2020;[Epub]     CrossRef
  • Genetically similar temperate phages form coalitions with their shared host that lead to niche-specific fitness effects
    Jonelle T R Basso, Nana Y D Ankrah, Matthew J Tuttle, Alex S Grossman, Ruth-Anne Sandaa, Alison Buchan
    The ISME Journal.2020; 14(7): 1688.     CrossRef
  • The enemy from within: a prophage of Roseburia intestinalis systematically turns lytic in the mouse gut, driving bacterial adaptation by CRISPR spacer acquisition
    Jeffrey K Cornuault, Elisabeth Moncaut, Valentin Loux, Aurélie Mathieu, Harry Sokol, Marie-Agnès Petit, Marianne De Paepe
    The ISME Journal.2020; 14(3): 771.     CrossRef
  • A Biological Inventory of Prophages in A. baumannii Genomes Reveal Distinct Distributions in Classes, Length, and Genomic Positions
    Belinda Loh, Jiayuan Chen, Prasanth Manohar, Yunsong Yu, Xiaoting Hua, Sebastian Leptihn
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Quantifying the forces that maintain prophages in bacterial genomes
    Amjad Khan, Lindi M. Wahl
    Theoretical Population Biology.2020; 133: 168.     CrossRef
  • Anti-CRISPRs: Protein Inhibitors of CRISPR-Cas Systems
    Alan R. Davidson, Wang-Ting Lu, Sabrina Y. Stanley, Jingrui Wang, Marios Mejdani, Chantel N. Trost, Brian T. Hicks, Jooyoung Lee, Erik J. Sontheimer
    Annual Review of Biochemistry.2020; 89(1): 309.     CrossRef
  • Lysogeny in the oceans: Lessons from cultivated model systems and a reanalysis of its prevalence
    Matthew J. Tuttle, Alison Buchan
    Environmental Microbiology.2020; 22(12): 4919.     CrossRef
  • The Principles, Mechanisms, and Benefits of Unconventional Agents in the Treatment of Biofilm Infection
    Jasminka Talapko, Ivana Škrlec
    Pharmaceuticals.2020; 13(10): 299.     CrossRef
  • Looking for the hidden: Characterization of lysogenic phages in potential pathogenic Vibrio species from the North Sea
    Ale Garin-Fernandez, Antje Wichels
    Marine Genomics.2020; 51: 100725.     CrossRef
  • Phage integration alters the respiratory strategy of its host
    Jeffrey N Carey, Erin L Mettert, Daniel R Fishman-Engel, Manuela Roggiani, Patricia J Kiley, Mark Goulian
    eLife.2019;[Epub]     CrossRef
  • Mining, analyzing, and integrating viral signals from metagenomic data
    Tingting Zheng, Jun Li, Yueqiong Ni, Kang Kang, Maria-Anna Misiakou, Lejla Imamovic, Billy K. C. Chow, Anne A. Rode, Peter Bytzer, Morten Sommer, Gianni Panagiotou
    Microbiome.2019;[Epub]     CrossRef
  • Mobilome and Resistome Reconstruction from Genomes Belonging to Members of the Bifidobacterium Genus
    Walter Mancino, Gabriele Andrea Lugli, Douwe van Sinderen, Marco Ventura, Francesca Turroni
    Microorganisms.2019; 7(12): 638.     CrossRef
  • Viral Regulation on Bacterial Community Impacted by Lysis-Lysogeny Switch: A Microcosm Experiment in Eutrophic Coastal Waters
    Xiaowei Chen, Ruijie Ma, Yunlan Yang, Nianzhi Jiao, Rui Zhang
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Prophages enhance resistance to antibiotic stress in a blaNDM-1-carrying bacterial host: authors’ reply
    So Yeon Kim, Kwan Soo Ko
    International Journal of Antimicrobial Agents.2019; 54(2): 267.     CrossRef
  • The prevalence and impact of lysogeny among oral isolates ofEnterococcus faecalis
    Roy H. Stevens, Hongming Zhang, Christine Sedgley, Adam Bergman, Anil Reddy Manda
    Journal of Oral Microbiology.2019; 11(1): 1643207.     CrossRef
  • Genomic and Proteomic Characterization of Bacteriophage BH1 Spontaneously Released from Probiotic Lactobacillus rhamnosus Pen
    Piotr Jarocki, Elwira Komoń-Janczara, Marcin Podleśny, Oleksandr Kholiavskyi, Monika Pytka, Monika Kordowska-Wiater
    Viruses.2019; 11(12): 1163.     CrossRef
  • Impact of Xenogeneic Silencing on Phage–Host Interactions
    Eugen Pfeifer, Max Hünnefeld, Ovidiu Popa, Julia Frunzke
    Journal of Molecular Biology.2019; 431(23): 4670.     CrossRef
  • Biotransformation of 2,4-dinitrotoluene by the beneficial association of engineered Pseudomonas putida with Arabidopsis thaliana
    Özlem Akkaya, Ebru Arslan
    3 Biotech.2019;[Epub]     CrossRef
  • Prophages in Lactobacillus reuteri Are Associated with Fitness Trade-Offs but Can Increase Competitiveness in the Gut Ecosystem
    Jee-Hwan Oh, Xiaoxi B. Lin, Shenwei Zhang, Stephanie L. Tollenaar, Mustafa Özçam, Case Dunphy, Jens Walter, Jan-Peter van Pijkeren, Maia Kivisaar
    Applied and Environmental Microbiology.2019;[Epub]     CrossRef
  • Big Impact of the Tiny: Bacteriophage–Bacteria Interactions in Biofilms
    Mads Frederik Hansen, Sine Lo Svenningsen, Henriette Lyng Røder, Mathias Middelboe, Mette Burmølle
    Trends in Microbiology.2019; 27(9): 739.     CrossRef
  • Cryptic-Prophage-Encoded Small Protein DicB Protects Escherichia coli from Phage Infection by Inhibiting Inner Membrane Receptor Proteins
    Preethi T. Ragunathan, Carin K. Vanderpool, George O'Toole
    Journal of Bacteriology.2019;[Epub]     CrossRef
  • Bacteriophages benefit from generalized transduction
    Alfred Fillol-Salom, Ahlam Alsaadi, Jorge A. Moura de Sousa, Li Zhong, Kevin R. Foster, Eduardo P. C. Rocha, José R. Penadés, Hanne Ingmer, Jakob Haaber, Michael Otto
    PLOS Pathogens.2019; 15(7): e1007888.     CrossRef
  • Optimality of the spontaneous prophage induction rate
    Michael G. Cortes, Jonathan Krog, Gábor Balázsi
    Journal of Theoretical Biology.2019; 483: 110005.     CrossRef
  • Characterization of a Highly Virulent Edwardsiella anguillarum Strain Isolated From Greek Aquaculture, and a Spontaneously Induced Prophage Therein
    Pantelis Katharios, Panos G. Kalatzis, Constantina Kokkari, Michail Pavlidis, Qiyao Wang
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • The dual lifestyle of genome‐integrating virophages in protists
    Mónica Berjón‐Otero, Anna Koslová, Matthias G. Fischer
    Annals of the New York Academy of Sciences.2019; 1447(1): 97.     CrossRef
  • A Viral Ecogenomics Framework To Uncover the Secrets of Nature’s “Microbe Whisperers”
    Simon Roux
    mSystems.2019;[Epub]     CrossRef
  • RETRACTED: Effects of prophage regions in a plasmid carrying a carbapenemase gene on survival against antibiotic stress
    So Yeon KIM, Kwan Soo KO
    International Journal of Antimicrobial Agents.2019; 53(1): 89.     CrossRef
  • May the Phage be With You? Prophage-Like Elements in the Genomes of Soft Rot Pectobacteriaceae: Pectobacterium spp. and Dickeya spp.
    Robert Czajkowski
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Evolution of Immune Systems From Viruses and Transposable Elements
    Felix Broecker, Karin Moelling
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Can a Symbiont (Also) Be Food?
    Kim L. Hoang, Levi T. Morran, Nicole M. Gerardo
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Bacteriophage Interactions with Marine Pathogenic Vibrios: Implications for Phage Therapy
    Panos Kalatzis, Daniel Castillo, Pantelis Katharios, Mathias Middelboe
    Antibiotics.2018; 7(1): 15.     CrossRef
  • Cupriavidus metallidurans Strains with Different Mobilomes and from Distinct Environments Have Comparable Phenomes
    Rob Van Houdt, Ann Provoost, Ado Van Assche, Natalie Leys, Bart Lievens, Kristel Mijnendonckx, Pieter Monsieurs
    Genes.2018; 9(10): 507.     CrossRef
  • Food Spoilage-Associated Leuconostoc, Lactococcus, and Lactobacillus Species Display Different Survival Strategies in Response to Competition
    Margarita Andreevskaya, Elina Jääskeläinen, Per Johansson, Anne Ylinen, Lars Paulin, Johanna Björkroth, Petri Auvinen, Harold L. Drake
    Applied and Environmental Microbiology.2018;[Epub]     CrossRef
  • Close Encounters of Three Kinds: Bacteriophages, Commensal Bacteria, and Host Immunity
    Eric C. Keen, Gautam Dantas
    Trends in Microbiology.2018; 26(11): 943.     CrossRef
  • Pathogenomics of Virulence Traits of Plesiomonas shigelloides That Were Deemed Inconclusive by Traditional Experimental Approaches
    Temitope C. Ekundayo, Anthony I. Okoh
    Frontiers in Microbiology.2018;[Epub]     CrossRef
  • Metagenomic Analysis of Bacteria, Fungi, Bacteriophages, and Helminths in the Gut of Giant Pandas
    Shengzhi Yang, Xin Gao, Jianghong Meng, Anyun Zhang, Yingmin Zhou, Mei Long, Bei Li, Wenwen Deng, Lei Jin, Siyue Zhao, Daifu Wu, Yongguo He, Caiwu Li, Shuliang Liu, Yan Huang, Hemin Zhang, Likou Zou
    Frontiers in Microbiology.2018;[Epub]     CrossRef
  • Spontaneously induced prophages are abundant in a naturally evolved bacterial starter culture and deliver competitive advantage to the host
    Svetlana Alexeeva, Jesús Adrián Guerra Martínez, Maciej Spus, Eddy J. Smid
    BMC Microbiology.2018;[Epub]     CrossRef
  • Characterization of redundant tRNAIles with CAU and UAU anticodons in Lactobacillus plantarum
    Chie Tomikawa, Sylvie Auxilien, Vincent Guérineau, Yuya Yoshioka, Kiyo Miyoshi, Hiroyuki Hori, Dominique Fourmy, Kazuyuki Takai, Satoko Yoshizawa
    The Journal of Biochemistry.2018; 163(3): 233.     CrossRef
  • Habitat Alterations by Viruses: Strategies by Tupanviruses and Others
    Hiroyuki Ogata
    Microbes and Environments.2018; 33(2): 117.     CrossRef
  • Phages infecting Faecalibacterium prausnitzii belong to novel viral genera that help to decipher intestinal viromes
    Jeffrey K. Cornuault, Marie-Agnès Petit, Mahendra Mariadassou, Leandro Benevides, Elisabeth Moncaut, Philippe Langella, Harry Sokol, Marianne De Paepe
    Microbiome.2018;[Epub]     CrossRef
  • Whole-Genome Sequence of the Novel Temperate Enterobacter Bacteriophage Tyrion, Isolated from the Gut of the Formosan Subterranean Termite
    Chinmay Vijay Tikhe, Chris R. Gissendanner, Claudia Husseneder
    Genome Announcements.2018;[Epub]     CrossRef
  • Metavirome Sequencing of the Termite Gut Reveals the Presence of an Unexplored Bacteriophage Community
    Chinmay V. Tikhe, Claudia Husseneder
    Frontiers in Microbiology.2018;[Epub]     CrossRef
  • The Discovery, Mechanisms, and Evolutionary Impact of Anti-CRISPRs
    Adair L. Borges, Alan R. Davidson, Joseph Bondy-Denomy
    Annual Review of Virology.2017; 4(1): 37.     CrossRef
  • Genome-Wide Abolishment of Mobile Genetic Elements Using Genome Shuffling and CRISPR/Cas-Assisted MAGE Allows the Efficient Stabilization of a Bacterial Chassis
    Kinga Umenhoffer, Gábor Draskovits, Ákos Nyerges, Ildikó Karcagi, Balázs Bogos, Edit Tímár, Bálint Csörgő, Róbert Herczeg, István Nagy, Tamás Fehér, Csaba Pál, György Pósfai
    ACS Synthetic Biology.2017; 6(8): 1471.     CrossRef
  • Embracing the enemy: the diversification of microbial gene repertoires by phage-mediated horizontal gene transfer
    Marie Touchon, Jorge A Moura de Sousa, Eduardo PC Rocha
    Current Opinion in Microbiology.2017; 38: 66.     CrossRef
  • Assessing Species Diversity Using Metavirome Data: Methods and Challenges
    Damayanthi Herath, Duleepa Jayasundara, David Ackland, Isaam Saeed, Sen-Lin Tang, Saman Halgamuge
    Computational and Structural Biotechnology Journal.2017; 15: 447.     CrossRef
  • Microbial processes driving coral reef organic carbon flow
    Cynthia B. Silveira, Giselle S. Cavalcanti, Juline M. Walter, Arthur W. Silva-Lima, Elizabeth A. Dinsdale, David G. Bourne, Cristiane C. Thompson, Fabiano L. Thompson
    FEMS Microbiology Reviews.2017; 41(4): 575.     CrossRef
  • Prophages of the genus Bifidobacterium as modulating agents of the infant gut microbiota
    Gabriele Andrea Lugli, Christian Milani, Francesca Turroni, Denise Tremblay, Chiara Ferrario, Leonardo Mancabelli, Sabrina Duranti, Doyle V. Ward, Maria Cristina Ossiprandi, Sylvain Moineau, Douwe van Sinderen, Marco Ventura
    Environmental Microbiology.2016; 18(7): 2196.     CrossRef
  • Global repositioning of transcription start sites in a plant-fermenting bacterium
    Magali Boutard, Laurence Ettwiller, Tristan Cerisy, Adriana Alberti, Karine Labadie, Marcel Salanoubat, Ira Schildkraut, Andrew C. Tolonen
    Nature Communications.2016;[Epub]     CrossRef
  • Uncovering Earth’s virome
    David Paez-Espino, Emiley A. Eloe-Fadrosh, Georgios A. Pavlopoulos, Alex D. Thomas, Marcel Huntemann, Natalia Mikhailova, Edward Rubin, Natalia N. Ivanova, Nikos C. Kyrpides
    Nature.2016; 536(7617): 425.     CrossRef
  • Identification and Initial Characterization of Prophages in Vibrio campbellii
    Nicola Lorenz, Matthias Reiger, Mauricio Toro-Nahuelpan, Andreas Brachmann, Lisa Poettinger, Laure Plener, Jürgen Lassak, Kirsten Jung, Baochuan Lin
    PLOS ONE.2016; 11(5): e0156010.     CrossRef
  • Bacterial viruses enable their host to acquire antibiotic resistance genes from neighbouring cells
    Jakob Haaber, Jørgen J. Leisner, Marianne T. Cohn, Arancha Catalan-Moreno, Jesper B. Nielsen, Henrik Westh, José R. Penadés, Hanne Ingmer
    Nature Communications.2016;[Epub]     CrossRef
  • Toxins go viral: phage‐encoded lysis releases group B colicins
    Katrina van Raay, Benjamin Kerr
    Environmental Microbiology.2016; 18(5): 1308.     CrossRef
  • Temperate phages promote colicin‐dependent fitness of Salmonella enterica serovar Typhimurium
    Lubov P. Nedialkova, Maja Sidstedt, Martin B. Koeppel, Stefanie Spriewald, Diana Ring, Roman G. Gerlach, Lionello Bossi, Bärbel Stecher
    Environmental Microbiology.2016; 18(5): 1591.     CrossRef
  • The Significance of Mutualistic Phages for Bacterial Ecology and Evolution
    Nancy Obeng, Akbar Adjie Pratama, Jan Dirk van Elsas
    Trends in Microbiology.2016; 24(6): 440.     CrossRef
  • Experimental Evolution as an Underutilized Tool for Studying Beneficial Animal–Microbe Interactions
    Kim L. Hoang, Levi T. Morran, Nicole M. Gerardo
    Frontiers in Microbiology.2016;[Epub]     CrossRef
  • Carriage of λ Latent Virus Is Costly for Its Bacterial Host due to Frequent Reactivation in Monoxenic Mouse Intestine
    Marianne De Paepe, Laurent Tournier, Elisabeth Moncaut, Olivier Son, Philippe Langella, Marie-Agnès Petit, Diarmaid Hughes
    PLOS Genetics.2016; 12(2): e1005861.     CrossRef
  • Piggyback-the-Winner in host-associated microbial communities
    Cynthia B Silveira, Forest L Rohwer
    npj Biofilms and Microbiomes.2016;[Epub]     CrossRef
  • The role of temperate bacteriophages in bacterial infection
    Emily V. Davies, Craig Winstanley, Joanne L. Fothergill, Chloe E. James, Andrew Millard
    FEMS Microbiology Letters.2016; 363(5): fnw015.     CrossRef
  • Phages in the global fruit and vegetable industry
    M. Żaczek, B. Weber-Dąbrowska, A. Górski
    Journal of Applied Microbiology.2015; 118(3): 537.     CrossRef
  • Absence of lysogeny in wild populations of Erwinia amylovora and Pantoea agglomerans
    Dwayne R. Roach, David R. Sjaarda, Calvin P. Sjaarda, Carlos Juarez Ayala, Brittany Howcroft, Alan J. Castle, Antonet M. Svircev
    Microbial Biotechnology.2015; 8(3): 510.     CrossRef
  • Helicobacter pullorum Isolated from Fresh Chicken Meat: Antibiotic Resistance and Genomic Traits of an Emerging Foodborne Pathogen
    Vítor Borges, Andrea Santos, Cristina Belo Correia, Margarida Saraiva, Armelle Ménard, Luís Vieira, Daniel A. Sampaio, Miguel Pinheiro, João Paulo Gomes, Mónica Oleastro, C. M. Dozois
    Applied and Environmental Microbiology.2015; 81(23): 8155.     CrossRef
  • A standardized protocol for the UV induction of Sulfolobus spindle-shaped virus 1
    Salvatore Fusco, Martina Aulitto, Simonetta Bartolucci, Patrizia Contursi
    Extremophiles.2015; 19(2): 539.     CrossRef
  • Live cell imaging of SOS and prophage dynamics in isogenic bacterial populations
    Stefan Helfrich, Eugen Pfeifer, Christina Krämer, Christian Carsten Sachs, Wolfgang Wiechert, Dietrich Kohlheyer, Katharina Nöh, Julia Frunzke
    Molecular Microbiology.2015; 98(4): 636.     CrossRef
  • When Competing Viruses Unify: Evolution, Conservation, and Plasticity of Genetic Identities
    Luis P. Villarreal, Guenther Witzany
    Journal of Molecular Evolution.2015; 80(5-6): 305.     CrossRef
  • Impact of Spontaneous Prophage Induction on the Fitness of Bacterial Populations and Host-Microbe Interactions
    Arun M. Nanda, Kai Thormann, Julia Frunzke, W. Margolin
    Journal of Bacteriology.2015; 197(3): 410.     CrossRef
  • Genome-Based Identification of Active Prophage Regions by Next Generation Sequencing in Bacillus licheniformis DSM13
    Robert Hertel, David Pintor Rodríguez, Jacqueline Hollensteiner, Sascha Dietrich, Andreas Leimbach, Michael Hoppert, Heiko Liesegang, Sonja Volland, Raymond Schuch
    PLOS ONE.2015; 10(3): e0120759.     CrossRef
  • Molecular microbiology in antibacterial research
    You-Hee Cho
    Journal of Microbiology.2014; 52(3): 185.     CrossRef
  • The chromosomal accommodation and domestication of mobile genetic elements
    Marie Touchon, Louis-Marie Bobay, Eduardo PC Rocha
    Current Opinion in Microbiology.2014; 22: 22.     CrossRef
[Minireview] Antibiofilm agents: A new perspective for antimicrobial strategy
Xi-Hui Li , Joon-Hee Lee
J. Microbiol. 2017;55(10):753-766.   Published online September 28, 2017
DOI: https://doi.org/10.1007/s12275-017-7274-x
  • 563 View
  • 0 Download
  • 132 Crossref
AbstractAbstract PDF
Biofilms are complex microbial architectures that attach to surfaces and encase microorganisms in a matrix composed of self-produced hydrated extracellular polymeric substances (EPSs). In biofilms, microorganisms become much more resistant to antimicrobial treatments, harsh environmental conditions, and host immunity. Biofilm formation by microbial pathogens greatly enhances survival in hosts and causes chronic infections that result in persistent inflammation and tissue damages. Currently, it is believed over 80% of chronic infectious diseases are mediated by biofilms, and it is known that conventional antibiotic medications are inadequate at eradicating these biofilm-mediated infections. This situation demands new strategies for biofilm-associated infections, and currently, researchers focus on the development of antibiofilm agents that are specific to biofilms, but are nontoxic, because it is believed that this prevents the development of drug resistance. Here, we review the most promising antibiofilm agents undergoing intensive research and development.

Citations

Citations to this article as recorded by  
  • Phage-Derived Endolysins Against Resistant Staphylococcus spp.: A Review of Features, Antibacterial Activities, and Recent Applications
    Mina Golban, Javad Charostad, Hossein Kazemian, Hamid Heidari
    Infectious Diseases and Therapy.2025; 14(1): 13.     CrossRef
  • Quinic acid enhances kanamycin efficacy against methicillin-resistant Staphylococcus aureus biofilms
    Borel Ndezo Bisso, Humera Jahan, Jean Paul Dzoyem, M. Iqbal Choudhary
    Microbial Pathogenesis.2025; 198: 107145.     CrossRef
  • Identification of a TonB-Dependent Siderophore Receptor as a Novel Anti-Biofilm Target and Virtual Screening for Its Inhibitor in Pseudomonas fluorescens PF08
    Taizhi Shen, Changrong Cao, Ruiyu Zhu, Jian Chen, Feifei Wang, Yanbo Wang
    Foods.2025; 14(3): 531.     CrossRef
  • The appropriate nutrient conditions for methicillin-resistant Staphylococcus aureus and Candida albicans dual-species biofilm formation in vitro
    Pavlína Vávrová, Ondřej Janďourek, Adéla Diepoltová, Petr Nachtigal, Klára Konečná
    Scientific Reports.2025;[Epub]     CrossRef
  • Antibiofilm activity of Plumbagin against Staphylococcus aureus
    Songtao Bie, Hui Yuan, Chen Shi, Chunshuang Li, Ming Lu, Ze Yao, Ruobing Liu, Ding Lu, Tenglong Ma, Heshui Yu
    Scientific Reports.2025;[Epub]     CrossRef
  • Echinacoside reduces intracellular c-di-GMP levels and potentiates tobramycin activity against Pseudomonas aeruginosa biofilm aggregates
    Yu-Ming Cai, Feng Hong, Amber De Craemer, Jacob George Malone, Aurélie Crabbé, Tom Coenye
    npj Biofilms and Microbiomes.2025;[Epub]     CrossRef
  • Anti-quorum sensing activity of olive leaf microwave-assisted extract
    Deniz Karamazakcadik, Betül Kilincli, Ceren Ilgaz, Pınar Kadiroglu
    Discover Food.2025;[Epub]     CrossRef
  • Fabrication of the Plant Extract Loaded Antimicrobial Nanofiber for Biofilm Associated Infections
    Sevim Feyza Erdoğmuş, Cengiz Sarikurkcu, Mustafa Abdullah Yilmaz
    ChemistrySelect.2025;[Epub]     CrossRef
  • CAM/TMA-DPH as a promising alternative to SYTO9/PI for cell viability assessment in bacterial biofilms
    Tinatini Tchatchiashvili, Mateusz Jundzill, Mike Marquet, Kamran A. Mirza, Mathias W. Pletz, Oliwia Makarewicz, Lara Thieme
    Frontiers in Cellular and Infection Microbiology.2025;[Epub]     CrossRef
  • Biofilms and antibiotic resistance profile of Enterococcus faecalis in selected dairy cattle farm environments in Bangladesh
    Naeem Ahammed Ibrahim Fahim, Md. Liton Rana, Md Abdullah Evna Hasan, Samia Salam, Rony Ibne Masud, Nazmul Huda, Sukumar Saha, Md. Tanvir Rahman, Yung-Fu Chang
    PLOS One.2025; 20(5): e0323667.     CrossRef
  • Pathogen-pathogen interactions during co-infections
    Rosana Barreto Rocha Ferreira, Luis Caetano Martha Antunes, Neta Sal-Man
    The ISME Journal.2025;[Epub]     CrossRef
  • Density Functional Theory Calculations, Antibiofilm Properties, and Edible Coating Application of Kefiran for Strawberry Shelf-Life Extension
    Gleison N. Marques, Alex S. Moraes, Marcela N. Argentin, Isadora C. Pedrino, Paulo T. Lacava, Daniela de A. Carrea, Isabela R.O. Pereira, Ernesto C. Pereira, Ilana L.B. da Cunha Camargo, Farayde Matta Fakhouri, Maria Inês B. Bernardi, Lucia Helena Mascaro
    International Journal of Biological Macromolecules.2025; 320: 146111.     CrossRef
  • Mastitis in goat: A review of etiology, epidemiology, economic impact, and public health concerns
    Abebe Tibebu, Yechale Teshome, Habtamu Tamrat, Adane Bahiru
    One Health.2025; 21: 101131.     CrossRef
  • The Inhibitory Effects and Mechanisms of Carvacrol and Cinnamaldehyde Against Erwinia amylovora in Pears
    Qian Zhou, Jingyi Wang, Hongbo Zhang, Xuetao Wang, Rongrong Mu, Qingqing Lan, Xu Su, Yongqiang Tian
    Plant Pathology.2025; 74(8): 2319.     CrossRef
  • Resveratrol in anti-biofilm therapy: Mechanisms, molecular derivatives, and emerging drug delivery strategies
    Mahboobeh Ghasemzadeh Rahbardar, Prashant Kesharwani, Amirhossein Sahebkar
    Fitoterapia.2025; 186: 106800.     CrossRef
  • Functionalized carbon nanoparticles for plumbagin delivery: Physicochemical characterization, antibacterial activity, and molecular docking
    Chunshuang Li, Ming Lu, Ze Yao, Ruobing Liu, Ding Lu, Tenglong Ma, Xiang Li, Hui Shang, Songtao Bie
    Journal of Drug Delivery Science and Technology.2025; 114: 107551.     CrossRef
  • Customized Lanthanide Nanobiohybrids for Noninvasive Precise Phototheranostics of Pulmonary Biofilm Infection
    Zhuo Li, Shan Lu, Wenzhen Liu, Zhuo Chen, Yunmei Huang, Xingjun Li, Jiacheng Gong, Xueyuan Chen
    ACS Nano.2024; 18(18): 11837.     CrossRef
  • Investigation of Pseudomonas aeruginosa bacteria in a number of Baghdad schools and extent of their resistance to disinfectants and sterilizers
    Shaimaa Hadi Al-Dulaimi, Miyada Kh Hassan
    Arab Gulf Journal of Scientific Research.2024; 42(4): 1805.     CrossRef
  • Role of small molecules and nanoparticles in effective inhibition of microbial biofilms: A ray of hope in combating microbial resistance
    Rohith Gattu, Sanjay S. Ramesh, Suhas Ramesh
    Microbial Pathogenesis.2024; 188: 106543.     CrossRef
  • Synthesis, Structural Characterization, and Biological Activities of 1,3,4‐ Thiadiazole Derivatives Containing Sulfonylpiperazine Structures
    You‐hua Liu, Fa‐li Wang, Xiao‐li Ren, Chang‐kun Li, Lin‐hong Jin, Xia Zhou
    Chemistry & Biodiversity.2024;[Epub]     CrossRef
  • Electrochemical biosensors on microfluidic chips as promising tools to study microbial biofilms: a review
    Adei Abouhagger, Raimonda Celiešiūtė-Germanienė, Neringa Bakute, Arunas Stirke, Wanessa C. M. A. Melo
    Frontiers in Cellular and Infection Microbiology.2024;[Epub]     CrossRef
  • Revolution of artificial intelligence in antimicrobial, anti-biofilm, and anti-inflammatory techniques: Smart photo-sonodynamic appliance in the internet of dental things (IoDT)
    Maryam Pourhajibagher, Rashin Bahrami, Abbas Bahador
    Medical Hypotheses.2024; 184: 111270.     CrossRef
  • Medical Scope of Biofilm and Quorum Sensing during Biofilm Formation: Systematic Review
    Mulat Erkihun, Zelalem Asmare, Kirubel Endalamew, Birhanu Getie, Teklehaimanot Kiros, Ayenew Berhan
    Bacteria.2024; 3(3): 118.     CrossRef
  • A Gas Therapy Strategy for Intestinal Flora Regulation and Colitis Treatment by Nanogel‐Based Multistage NO Delivery Microcapsules
    Ya‐Jun Fu, Xing Zhao, Li‐Ya Wang, Kai Li, Niu Jiang, Shu‐Ting Zhang, Rao‐Kaijuan Wang, Yi‐Fan Zhao, Wei Yang
    Advanced Materials.2024;[Epub]     CrossRef
  • Controlling Staphylococcus aureus biofilm on food contact surfaces: the efficacy of Oliveria decumbens essential oil and its implications on biofilm-related genes
    Mahshad Javid Moghadam, Siavash Maktabi, Mehdi Zarei, Pezhman Mahmoodi
    Journal of Applied Microbiology.2024;[Epub]     CrossRef
  • Isolation of 2,2′-azoxybisbenzyl alcohol from Agaricus subrutilescens and its inhibitory activity against bacterial biofilm formation
    Jewel C De Padua, Tomoya Tanaka, Kotomi Ueno, Thomas Edison E dela Cruz, Atsushi Ishihara
    Bioscience, Biotechnology, and Biochemistry.2024; 88(9): 983.     CrossRef
  • Control of Staphylococcus epidermidis biofilm by surfactins of an endophytic bacterium Bacillus sp. 15 F
    Marwa Jardak, Raphaël Lami, Oumaima Saadaoui, Hajer Jlidi, Didier Stien, Sami Aifa, Sami Mnif
    Enzyme and Microbial Technology.2024; 180: 110477.     CrossRef
  • A concise review of the effect of efflux pump on biofilm intensity in bacteria with a special view to Mycobacterium
    Marjan Darbani Fouladi, Saeid Besharati, Parissa Farnia, Adnan Khosravi
    Journal of Preventive, Diagnostic and Treatment Strategies in Medicine.2024; 3(1): 1.     CrossRef
  • Translating bacteriophage-derived depolymerases into antibacterial therapeutics: Challenges and prospects
    Honglan Wang, Yannan Liu, Changqing Bai, Sharon Shui Yee Leung
    Acta Pharmaceutica Sinica B.2024; 14(1): 155.     CrossRef
  • Modulation of proteins by rare earth elements as a biotechnological tool
    Azam Bakhti, Zahra Shokouhi, Fatemeh Mohammadipanah
    International Journal of Biological Macromolecules.2024; 258: 129072.     CrossRef
  • Antibiofilm Strategies in Neonatal and Pediatric Infections
    Chrysoula Kosmeri, Vasileios Giapros, Anastasios Serbis, Foteini Balomenou, Maria Baltogianni
    Antibiotics.2024; 13(6): 509.     CrossRef
  • In vitro anti-bactrical activity and its preliminary mechanism of action of the non-medicinal parts of Sanguisorba officinalis L. against Helicobacter pylori infection
    Pengting Chen, Meiyun Chen, Chang Peng, Jiahui Yan, Xue Shen, Weijia Zhang, Yuemei Yuan, Guoxing Gan, Xiaojun Luo, Weixing Zhu, Meicun Yao
    Journal of Ethnopharmacology.2024; 318: 116981.     CrossRef
  • Delving into the Mechanisms of Sponge-Associated Enterobacter against Staphylococcal Biofilms
    Anna Luiza Bauer Canellas, Bruno Francesco Rodrigues de Oliveira, Suzanne de Oliveira Nunes, Camila Adão Malafaia, Ana Claudia F. Amaral, Daniel Luiz Reis Simas, Ivana Correa Ramos Leal, Marinella Silva Laport
    Molecules.2023; 28(12): 4843.     CrossRef
  • A new approach to overcoming antibiotic-resistant bacteria: Traditional Chinese medicine therapy based on the gut microbiota
    Peng Xue, Rui Sang, Nan Li, Siyuan Du, Xiuwen Kong, Mingliang Tai, Zhihao Jiang, Ying Chen
    Frontiers in Cellular and Infection Microbiology.2023;[Epub]     CrossRef
  • Molybdenum oxide nanotube caps decorated with ultrafine Ag nanoparticles: Synthesis and antimicrobial activity
    Shabnam Yavari, Kayode Olaifa, Darya Shafiee, Reza Rasuli, Mehdi Shafiee
    International Journal of Pharmaceutics.2023; 647: 123528.     CrossRef
  • Bacterial biofilm inhibitors: An overview
    Vipin Chandra Kalia, Sanjay K.S. Patel, Jung-Kul Lee
    Ecotoxicology and Environmental Safety.2023; 264: 115389.     CrossRef
  • Better together– Salmonella biofilm-associated antibiotic resistance
    Adrianna Aleksandrowicz, Ewa Carolak, Agata Dutkiewicz, Aleksandra Błachut, Wiktoria Waszczuk, Krzysztof Grzymajlo
    Gut Microbes.2023;[Epub]     CrossRef
  • Natural Medicine a Promising Candidate in Combating Microbial Biofilm
    Athar Shamim, Asgar Ali, Zeenat Iqbal, Mohd Aamir Mirza, Mohd Aqil, S. M. Kawish, Ayesha Siddiqui, Vijay Kumar, Punnoth Poonkuzhi Naseef, Abdulkhaliq Ali F. Alshadidi, Mohamed Saheer Kuruniyan
    Antibiotics.2023; 12(2): 299.     CrossRef
  • Antibiotic Resistance and Biofilm Infections in the NICUs and Methods to Combat It
    Maria Baltogianni, Vasileios Giapros, Chrysoula Kosmeri
    Antibiotics.2023; 12(2): 352.     CrossRef
  • In vitro activity of sanitizers against mono- and polymicrobial biofilms of C. parapsilosis and S. aureus
    Vitor de Paula Castro, Danilo Yamamoto Thomaz, Kayro de Lima Vieira, Leonardo Guedes Lopes, Flavia Rossi, Gilda M. B. Del Negro, Gil Benard, Regina Helena Pires, Andreas H. Groll
    Antimicrobial Agents and Chemotherapy.2023;[Epub]     CrossRef
  • Inhibition of bacterial biofilms by the snake venom proteome
    Neyaz A. Khan, Fernanda G. Amorim, John P. Dunbar, Dayle Leonard, Damien Redureau, Loïc Quinton, Michel M. Dugon, Aoife Boyd
    Biotechnology Reports.2023; 39: e00810.     CrossRef
  • Compounds That Have an Anti-Biofilm Effect against Common Bacteria at Very Low Concentrations and Their Antibiotic Combination Effect
    Hyeon-Ji Hwang, Dan-dan Li, Jieun Lee, Min Kyung Kang, Hyung Ryong Moon, Joon-Hee Lee
    Antibiotics.2023; 12(5): 853.     CrossRef
  • Biofilm-Producing Ability of Staphylococcus aureus Obtained from Surfaces and Milk of Mastitic Cows
    Mária Vargová, František Zigo, Jana Výrostková, Zuzana Farkašová, Ibrahim F. Rehan
    Veterinary Sciences.2023; 10(6): 386.     CrossRef
  • Utilization of Existing Human Kinase Inhibitors as Scaffolds in the Development of New Antimicrobials
    Monika I. Konaklieva, Balbina J. Plotkin
    Antibiotics.2023; 12(9): 1418.     CrossRef
  • Synergistic action of phages and lytic proteins with antibiotics: a combination strategy to target bacteria and biofilms
    Han Lu, Zong Li, Amro Elbaz, Shou-Qing Ni
    BMC Microbiology.2023;[Epub]     CrossRef
  • Consolidated knowledge-guided computational pipeline for therapeutic intervention against bacterial biofilms - a review
    Reetika Debroy, Sudha Ramaiah
    Biofouling.2023; 39(9-10): 928.     CrossRef
  • Molecular identification of a novel antimicrobial peptide in giant Triton snail Charonia tritonis: mRNA profiles for tissues and its potential antibacterial activity
    Xitong Cen, Bing Liu, Gege Zhang, Huiru Liu, Gaoyou Yao, Maoxian He, Wenguang Liu
    Fish & Shellfish Immunology.2023; 136: 108734.     CrossRef
  • Effect of a Depolymerase Encoded by Phage168 on a Carbapenem-Resistant Klebsiella pneumoniae and Its Biofilm
    Xu Sun, Bingchun Pu, Jinhong Qin, Jun Xiang
    Pathogens.2023; 12(12): 1396.     CrossRef
  • In Vitro Antibiofilm Activity of Resveratrol against Aeromonas hydrophila
    Ting Qin, Kai Chen, Bingwen Xi, Liangkun Pan, Jun Xie, Liushen Lu, Kai Liu
    Antibiotics.2023; 12(4): 686.     CrossRef
  • Sodium Octanoate–Functionalized Chitosan Coating Reduces Dry Rot Caused by Fusarium Sambucinum (AUC-TZ-1) in Potato Minitubers in Storage
    Rafael Jiménez-Mejía, Mariana Corona-Márquez, Jessica G. Zepeda-García, Cristina Rodríguez-Cárdenas, Gustavo Santoyo, Luzmaría R. Morales-Cedeño, Ricardo I. Medina-Estrada, Mónica G. Sánchez-Ceja, Pedro D. Loeza-Lara
    Potato Research.2023; 66(4): 1059.     CrossRef
  • Combined antimicrobial effect of phage-derived endolysin and depolymerase against biofilm-forming Salmonella Typhimurium
    Junhwan Kim, Jun Wang, Juhee Ahn
    Biofouling.2023; 39(7): 763.     CrossRef
  • Influences of flavonoids from Sedum aizoon L. on biofilm formation of Pseudomonas fragi
    Haoxia Wang, Qingqing Ge, Xingfeng Shao, Yingying Wei, Xin Zhang, Hongfei Wang, Feng Xu
    Applied Microbiology and Biotechnology.2023; 107(11): 3687.     CrossRef
  • Antibacterial and antibiofilm potential of Lacticaseibacillus rhamnosus YT and its cell-surface extract
    Chengran Guan, Wenjuan Zhang, Jianbo Su, Feng Li, Dawei Chen, Xia Chen, Yujun Huang, Ruixia Gu, Chenchen Zhang
    BMC Microbiology.2023;[Epub]     CrossRef
  • From Antibacterial to Antibiofilm Targeting: An Emerging Paradigm Shift in the Development of Quaternary Ammonium Compounds (QACs)
    Evgeniya A. Saverina, Nikita A. Frolov, Olga A. Kamanina, Vyacheslav A. Arlyapov, Anatoly N. Vereshchagin, Valentine P. Ananikov
    ACS Infectious Diseases.2023; 9(3): 394.     CrossRef
  • Acinetobacter baumannii biofilm and its potential therapeutic targets
    Eman Abdelbaset Mohamed, Marwa M. Raafat, Reham Samir Mohamed, Amal Emad Eldin Ali
    Future Journal of Pharmaceutical Sciences.2023;[Epub]     CrossRef
  • Control of pathogenic bacteria using marine actinobacterial extract with antiquorum sensing and antibiofilm activity
    Marco Wijaya, Dea Delicia, Diana Elizabeth Waturangi
    BMC Research Notes.2023;[Epub]     CrossRef
  • Synthetic non-toxic anti-biofilm agents as a strategy in combating bacterial resistance
    Rasha Mohamed Hassan, Mohamed Samir Abd El-Maksoud, Iman Ahmed Youssef Ghannam, Aida Abdel- Sattar El-Azzouny, Mohamed Nabil Aboul-Enein
    European Journal of Medicinal Chemistry.2023; 262: 115867.     CrossRef
  • Isolation and characterization of SGF3, a novel Microviridae phage infecting Shigella flexneri
    Han Lu, Wenbin Xiong, Zong Li, Peihan Yan, Ruyin Liu, Xinchun Liu
    Molecular Genetics and Genomics.2022; 297(4): 935.     CrossRef
  • Phytocompound Mediated Blockage of Quorum Sensing Cascade in ESKAPE Pathogens
    Sreejita Ghosh, Dibyajit Lahiri, Moupriya Nag, Ankita Dey, Soumya Pandit, Tanmay Sarkar, Siddhartha Pati, Zulhisyam Abdul Kari, Ahmad Razali Ishak, Hisham Atan Edinur, Rina Rani Ray
    Antibiotics.2022; 11(1): 61.     CrossRef
  • Enhanced sunlight-absorption of Fe2O3 covered by PANI for the photodegradation of organic pollutants and antimicrobial inactivation
    Faisal Mukhtar, Tauseef Munawar, Muhammad Shahid Nadeem, Shoukat Alim Khan, Muammer Koc, Sana Batool, Murtaza Hasan, Faisal Iqbal
    Advanced Powder Technology.2022; 33(8): 103708.     CrossRef
  • Borrelia burgdorferi Co-Localizing with Amyloid Markers in Alzheimer’s Disease Brain Tissues
    Alireza G. Senejani, Jasmin Maghsoudlou, Dina El-Zohiry, Gauri Gaur, Keith Wawrzeniak, Cristina Caravaglia, Vishwa A. Khatri, Alan MacDonald, Eva Sapi
    Journal of Alzheimer's Disease.2022; 85(2): 889.     CrossRef
  • Advanced Strategies of Enzyme Activity Regulation for Biomedical Applications
    Zihan Chen, Yu Zhao, Yang Liu
    ChemBioChem.2022;[Epub]     CrossRef
  • Mode of action of elasnin as biofilm formation eradicator of methicillin-resistant Staphylococcus aureus
    Lexin Long, Jordy Evan Sulaiman, Yao Xiao, Aifang Cheng, Ruojun Wang, Jessie James Malit, Wai Chuen Wong, Wenchao Liu, Yong-Xin Li, Feng Chen, Henry Lam, Pei-Yuan Qian
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • In silico disrupting quorum sensing of porphyromonas gingivalis via essential oils and coumarin derivatives
    Al-Madhagi Haitham Ahmed, Tahan Zaher Samman
    Annals of Proteomics and Bioinformatics.2022; 6(1): 001.     CrossRef
  • Nitric oxide-releasing L-Tryptophan and L-Phenylalanine based Poly(ester urea)s electrospun composite mats as antibacterial and antibiofilm dressing for wound healing
    Mengna Li, Weiwang Qiu, Qian Wang, Na Li, Xueli Wang, Jianyong Yu, Xiaoran Li, Faxue Li, Dequn Wu
    Composites Part B: Engineering.2022; 229: 109484.     CrossRef
  • Nitric Oxide-Releasing Tryptophan-Based Poly(ester urea)s Electrospun Composite Nanofiber Mats with Antibacterial and Antibiofilm Activities for Infected Wound Healing
    Mengna Li, Weiwang Qiu, Qian Wang, Na Li, Lu Liu, Xueli Wang, Jianyong Yu, Xiaoran Li, Faxue Li, Dequn Wu
    ACS Applied Materials & Interfaces.2022; 14(14): 15911.     CrossRef
  • Recent Strategies to Combat Biofilms Using Antimicrobial Agents and Therapeutic Approaches
    Looniva Shrestha, Hai-Ming Fan, Hui-Ren Tao, Jian-Dong Huang
    Pathogens.2022; 11(3): 292.     CrossRef
  • Activity of Antibiotics and Potential Antibiofilm Agents against Biofilm-Producing Mycobacterium avium-intracellulare Complex Causing Chronic Pulmonary Infections
    Elena Portell-Buj, Cecibel González-Criollo, Alexandre López-Gavín, Mariana Fernández-Pittol, Maria Antònia Busquets, Joan Estelrich, Montserrat Garrigó, Marc Rubio, Griselda Tudó, Julian Gonzalez-Martin
    Antibiotics.2022; 11(5): 589.     CrossRef
  • Supermagnetic halloysite nanotubes surface-tuned with aminosilane for protease immobilization and applied for eradication of bacterial biofilm
    Min Kim, Min Kyoung Shin, Jung-Suk Sung, Avinash A. Kadam
    Applied Surface Science.2022; 593: 153469.     CrossRef
  • Biofilms as a microbial hazard in the food industry: A scoping review
    Manjeet Sharan, Deepthi Vijay, Pankaj Dhaka, Jasbir Singh Bedi, Jatinder Paul Singh Gill
    Journal of Applied Microbiology.2022; 133(4): 2210.     CrossRef
  • Enhanced inactivation of Salmonella enterica Enteritidis biofilms on the stainless steel surface by proteinase K in the combination with chlorine
    Min-Jeong Kim, Joo-Sung Kim
    Food Control.2022; 132: 108519.     CrossRef
  • Phylogenetic identification of fungi isolated from strawberry and papaya fruits and their susceptibility to fatty acids
    Leticia Robles-Yerena, Johan Rodríguez-Mendoza, Gustavo Santoyo, Xavier Iván Ochoa-Alvarado, Ricardo Ivan Medina-Estrada, Rafael Jiménez-Mejía, Pedro Damián Loeza-Lara
    Canadian Journal of Plant Pathology.2022; 44(6): 828.     CrossRef
  • New insights into the inhibitory roles and mechanisms of D-amino acids in bacterial biofilms in medicine, industry, and agriculture
    Saeed Niazi Vahdati, Hossein Behboudi, Sepideh Aliniaye Navasatli, Sara Tavakoli, Maliheh Safavi
    Microbiological Research.2022; 263: 127107.     CrossRef
  • Synergistic combination of malic acid with sodium hypochlorite impairs biofilm of Cronobacter sakazakii
    Rajni Chauhan, Savita Kumari, Gunjan Goel, Wamik Azmi
    LWT.2022; 155: 112902.     CrossRef
  • Marine natural products and their synthetic analogs as promising antibiofilm agents for antibiotics discovery and development
    Yueting Deng, Yang Liu, Juan Li, Xiao Wang, Shan He, Xiaojun Yan, Yutong Shi, Weiyan Zhang, Lijian Ding
    European Journal of Medicinal Chemistry.2022; 239: 114513.     CrossRef
  • Antimicrobial activities of 1-phenyl-3-methyl-4-trichloroacetyl-pyrazolone: Experimental, DFT studies, and molecular docking investigation
    Ededet A. Eno, Justina I. Mbonu, Hitler Louis, Faith S. Patrick-Inezi, Terkumbur E. Gber, Tomsmith O. Unimuke, Emmanuel E.D. Okon, Innocent Benjamin, Offiong E. Offiong
    Journal of the Indian Chemical Society.2022; 99(7): 100524.     CrossRef
  • Antibiofilm Effects of Bacteriocin BMP32r on Listeria monocytogenes
    Zhu Qiao, Leshan Zhang, Xin Wang, Bianfang Liu, Yuanyuan Shan, Yanglei Yi, Yuan Zhou, Xin Lü
    Probiotics and Antimicrobial Proteins.2022; 14(6): 1067.     CrossRef
  • NO donors and NO delivery methods for controlling biofilms in chronic lung infections
    Yu-Ming Cai, Ying-Dan Zhang, Liang Yang
    Applied Microbiology and Biotechnology.2021; 105(10): 3931.     CrossRef
  • Enzyme Therapy: Current Challenges and Future Perspectives
    Miguel de la Fuente, Laura Lombardero, Alfonso Gómez-González, Cristina Solari, Iñigo Angulo-Barturen, Arantxa Acera, Elena Vecino, Egoitz Astigarraga, Gabriel Barreda-Gómez
    International Journal of Molecular Sciences.2021; 22(17): 9181.     CrossRef
  • Antibiofilm Activity of Gallium(III) Complexed Anionic Polymers in Combination with Antibiotics
    Jielin Ma, Shuai Hou, Mary B. Chan‐Park, Hongwei Duan
    Macromolecular Rapid Communications.2021;[Epub]     CrossRef
  • Pseudomonas aeruginosa Biofilm Formation and Its Control
    Aishwarya Vetrivel, Monica Ramasamy, Preethi Vetrivel, Santhi Natchimuthu, Shobana Arunachalam, Gon-Sup Kim, Rajeswari Murugesan
    Biologics.2021; 1(3): 312.     CrossRef
  • Dynamic Constitutional Frameworks as Antibacterial and Antibiofilm Agents
    Andrei Diaconu, Tom Coenye, Mihail Barboiu, Stéphane P. Vincent
    Angewandte Chemie International Edition.2021; 60(41): 22505.     CrossRef
  • Identification of Bioactive Compounds and Evaluation of the Antimicrobial and Anti-biofilm Effect of Psammocinia sp. and Hyattella sp. Sponges from the Persian Gulf
    Homa Hamayeli, Mehdi Hassanshahian, Majid Askari Hesni
    Thalassas: An International Journal of Marine Sciences.2021; 37(1): 357.     CrossRef
  • Antibacterial peptides from seafood: A promising weapon to combat bacterial hazards in food
    Jinrong Tong, Zhaohuan Zhang, Qian Wu, Zhenhua Huang, Pradeep K. Malakar, Liangbiao Chen, Haiquan Liu, Yingjie Pan, Yong Zhao
    Food Control.2021; 125: 108004.     CrossRef
  • Discovery of Polyvalent Myovirus (vB_STM-2) Phage as a Natural Antimicrobial System to Lysis and Biofilm Removal of Salmonella Typhimurium Isolates from Various Food Sources
    Iman M. A. Abdelhadi, Ahmed R. Sofy, Ahmed A. Hmed, Ehab E. Refaey, Hany E. Soweha, Mohamed A. Abbas
    Sustainability.2021; 13(21): 11602.     CrossRef
  • Phytochemical Composition, Antibacterial, and Antibiofilm Activity of Malva sylvestris Against Human Pathogenic Bacteria
    Mahmoud Fathi, Maryam Ghane, Leila Pishkar
    Jundishapur Journal of Natural Pharmaceutical Products.2021;[Epub]     CrossRef
  • Bacteriophage-Derived Depolymerases against Bacterial Biofilm
    Gracja Topka-Bielecka, Aleksandra Dydecka, Agnieszka Necel, Sylwia Bloch, Bożena Nejman-Faleńczyk, Grzegorz Węgrzyn, Alicja Węgrzyn
    Antibiotics.2021; 10(2): 175.     CrossRef
  • Inhibitory Effects of Cinnamaldehyde Derivatives on Biofilm Formation and Virulence Factors in Vibrio Species
    Olajide Sunday Faleye, Ezhaveni Sathiyamoorthi, Jin-Hyung Lee, Jintae Lee
    Pharmaceutics.2021; 13(12): 2176.     CrossRef
  • In Vitro Effect of Copper (I) Complex [Cu(NN1)2](ClO4) on Vibrio harveyi BB170 Biofilm Formation
    Sarita Soto-Aguilera, Brenda Modak, Maialen Aldabaldetrecu, Carla P. Lozano, Juan Guerrero, Claudia Lefimil, Mick Parra
    Microorganisms.2021; 9(11): 2273.     CrossRef
  • Dynamic Constitutional Frameworks as Antibacterial and Antibiofilm Agents
    Andrei Diaconu, Tom Coenye, Mihail Barboiu, Stéphane P. Vincent
    Angewandte Chemie.2021; 133(41): 22679.     CrossRef
  • Antibacterial, anti-biofilm and anti-quorum sensing activities of Artemisia dracunculus essential oil (EO): a study against Salmonella enterica serovar Typhimurium and Staphylococcus aureus
    Shima Mohammadi Pelarti, Leila Karimi Zarehshuran, Laleh Babaeekhou, Maryam Ghane
    Archives of Microbiology.2021; 203(4): 1529.     CrossRef
  • Bacterial Biofilm Destruction: A Focused Review On The Recent Use of Phage-Based Strategies With Other Antibiofilm Agents
    Stephen Amankwah, Kedir Abdusemed, Tesfaye Kassa
    Nanotechnology, Science and Applications.2021; Volume 14: 161.     CrossRef
  • The Chemistry of Antibiofilm Phytocompounds
    Dibyajit Lahiri, Moupriya Nag, Sayantani Garai, Rina Rani Ray
    Mini-Reviews in Medicinal Chemistry.2021; 21(9): 1034.     CrossRef
  • Synergistic Activity of Equol and Meropenem against Carbapenem-Resistant Escherichia coli
    Hye-Rim Kim, Yong-Bin Eom
    Antibiotics.2021; 10(2): 161.     CrossRef
  • Microbial biofilm: formation, architecture, antibiotic resistance, and control strategies
    Muzamil Ahmad Rather, Kuldeep Gupta, Manabendra Mandal
    Brazilian Journal of Microbiology.2021; 52(4): 1701.     CrossRef
  • Synthesis and antimicrobial evaluation of a pyrazoline-pyridine silver(I) complex: DNA-interaction and anti-biofilm activity
    Dimitris Matiadis, Maria Karagiaouri, Barbara Mavroidi, Katarzyna E. Nowak, Georgios Katsipis, Maria Pelecanou, Anastasia Pantazaki, Marina Sagnou
    BioMetals.2021; 34(1): 67.     CrossRef
  • Multi-purpose Disinfecting Solutions only Partially Inhibit the Development of Ocular Microbes Biofilms in Contact Lens Storage Cases
    Fabiano B.M. de Araújo, Vinicius C. Morais, Bianca T.M. de Oliveira, Kaíque Y.G. de Lima, Victor T. Gomes, Ian P.G. do Amaral, Ulrich Vasconcelos
    Middle East African Journal of Ophthalmology.2021; 28(2): 116.     CrossRef
  • Activity of Liquid and Volatile Fractions of Essential Oils against Biofilm Formed by Selected Reference Strains on Polystyrene and Hydroxyapatite Surfaces
    Ruth Dudek-Wicher, Justyna Paleczny, Beata Kowalska-Krochmal, Patrycja Szymczyk-Ziółkowska, Natalia Pachura, Antoni Szumny, Malwina Brożyna
    Pathogens.2021; 10(5): 515.     CrossRef
  • Antibacterial and antibiofilm activities of diphyllin against fish pathogens
    Suman Thamburaj, Elangomathavan Ramaraj, Sivasamy Sethupathy, Chakkaravarthi Kamalanathan, Atchudan Raji, Satish Kumar Rajasekharan
    Microbial Pathogenesis.2020; 145: 104232.     CrossRef
  • The Role of Bacterial Biofilm in Antibiotic Resistance and Food Contamination
    Gedif Meseret Abebe
    International Journal of Microbiology.2020; 2020: 1.     CrossRef
  • The use of papain for the removal of biofilms formed by pathogenic Staphylococcus aureus and Campylobacter jejuni
    Ye Ji Song, Hwan Hee Yu, Yeon Jin Kim, Na-Kyoung Lee, Hyun-Dong Paik
    LWT.2020; 127: 109383.     CrossRef
  • Biofilm inhibition and mode of action of epigallocatechin gallate against Vibrio mimicus
    Rui Li, Jieyuan Lu, Hebo Duan, Jun Yang, Changbo Tang
    Food Control.2020; 113: 107148.     CrossRef
  • Structural approaches to pathway-specific antimicrobial agents
    Michael E. Johnson, Leslie W.-M. Fung
    Translational Research.2020; 220: 114.     CrossRef
  • Study on the effects of different dimerization positions on biological activity of partial d-Amino acid substitution analogues of Anoplin
    Chao Zhong, Sanhu Gou, Tianqi Liu, Yuewen Zhu, Ningyi Zhu, Hui Liu, Yun Zhang, Junqiu Xie, Xiaomin Guo, Jingman Ni
    Microbial Pathogenesis.2020; 139: 103871.     CrossRef
  • Thiazoles, Their Benzofused Systems, and Thiazolidinone Derivatives: Versatile and Promising Tools to Combat Antibiotic Resistance
    Stella Cascioferro, Barbara Parrino, Daniela Carbone, Domenico Schillaci, Elisa Giovannetti, Girolamo Cirrincione, Patrizia Diana
    Journal of Medicinal Chemistry.2020; 63(15): 7923.     CrossRef
  • Alterocin, an Antibiofilm Protein Secreted by Pseudoalteromonas sp. Strain 3J6
    Albane Jouault, Angélique Gobet, Marjolaine Simon, Emilie Portier, Morgan Perennou, Erwan Corre, Fanny Gaillard, David Vallenet, Gurvan Michel, Yannick Fleury, Alexis Bazire, Alain Dufour, Andrew J. McBain
    Applied and Environmental Microbiology.2020;[Epub]     CrossRef
  • Thermoregulation of Pseudomonas aeruginosa Biofilm Formation
    Suran Kim, Xi-Hui Li, Hyeon-Ji Hwang, Joon-Hee Lee, Danilo Ercolini
    Applied and Environmental Microbiology.2020;[Epub]     CrossRef
  • Scientific evidence in antimicrobial photodynamic therapy: An alternative approach for reducing cariogenic bacteria
    Ana Catarina Martins Reis, Wanessa Fernandes Matias Regis, Lidiany Karla Azevedo Rodrigues
    Photodiagnosis and Photodynamic Therapy.2019; 26: 179.     CrossRef
  • Triterpene Derivatives as Relevant Scaffold for New Antibiofilm Drugs
    Gloria Narjara Santos da Silva, Muriel Primon-Barros, Alexandre José Macedo, Simone Cristina Baggio Gnoatto
    Biomolecules.2019; 9(2): 58.     CrossRef
  • Characterization and Genome Analysis of Staphylococcus aureus Podovirus CSA13 and Its Anti-Biofilm Capacity
    Yoyeon Cha, Jihwan Chun, Bokyung Son, Sangryeol Ryu
    Viruses.2019; 11(1): 54.     CrossRef
  • Effective removal of staphylococcal biofilms on various food contact surfaces by Staphylococcus aureus phage endolysin LysCSA13
    Yoyeon Cha, Bokyung Son, Sangryeol Ryu
    Food Microbiology.2019; 84: 103245.     CrossRef
  • Bacteria‐Targeted Supramolecular Photosensitizer Delivery Vehicles for Photodynamic Ablation Against Biofilms
    Yifan Gao, Jing Wang, Dengfeng Hu, Yongyan Deng, Tingting Chen, Qiao Jin, Jian Ji
    Macromolecular Rapid Communications.2019;[Epub]     CrossRef
  • The Varied Role of Efflux Pumps of the MFS Family in the Interplay of Bacteria with Animal and Plant Cells
    Martina Pasqua, Milena Grossi, Alessandro Zennaro, Giulia Fanelli, Gioacchino Micheli, Frederic Barras, Bianca Colonna, Gianni Prosseda
    Microorganisms.2019; 7(9): 285.     CrossRef
  • Developing natural products as potential anti-biofilm agents
    Lan Lu, Wei Hu, Zeru Tian, Dandan Yuan, Guojuan Yi, Yangyang Zhou, Qiang Cheng, Jie Zhu, Mingxing Li
    Chinese Medicine.2019;[Epub]     CrossRef
  • A Synthetic Derivative of Antimicrobial Peptide Holothuroidin 2 from Mediterranean Sea Cucumber (Holothuria tubulosa) in the Control of Listeria monocytogenes
    Maria Grazia Cusimano, Angelo Spinello, Giampaolo Barone, Domenico Schillaci, Stella Cascioferro, Alessandra Magistrato, Barbara Parrino, Vincenzo Arizza, Maria Vitale
    Marine Drugs.2019; 17(3): 159.     CrossRef
  • A Consideration of Antibacterial Agent Efficacies in the Treatment and Prevention of Formation of Staphylococcus aureus Biofilm
    Zahra Sedarat, Andrew W. Taylor-Robinson
    Journal of Microbiology and Infectious Diseases.2019; : 167.     CrossRef
  • Biofilm Disruption Utilizing α/β Chimeric Polypeptide Molecular Brushes
    Si Zhang, Xi-Mian Xiao, Fan Qi, Peng-Cheng Ma, Wei-Wei Zhang, Cheng-Zhi Dai, Dan-Feng Zhang, Run-Hui Liu
    Chinese Journal of Polymer Science.2019; 37(11): 1105.     CrossRef
  • Perspectives towards antibiotic resistance: from molecules to population
    Joon-Hee Lee
    Journal of Microbiology.2019; 57(3): 181.     CrossRef
  • Nanoantibiotics: A Novel Rational Approach to Antibiotic Resistant Infections
    Ayse Basak Engin, Atilla Engin
    Current Drug Metabolism.2019; 20(9): 720.     CrossRef
  • Targeting the Pseudomonas quinolone signal quorum sensing system for the discovery of novel anti-infective pathoblockers
    Christian Schütz, Martin Empting
    Beilstein Journal of Organic Chemistry.2018; 14: 2627.     CrossRef
  • Interdependence between iron acquisition and biofilm formation in Pseudomonas aeruginosa
    Donghoon Kang, Natalia V. Kirienko
    Journal of Microbiology.2018; 56(7): 449.     CrossRef
  • Intrapulmonary percussive ventilation improves lung function in cystic fibrosis patients chronically colonized with Pseudomonas aeruginosa: a pilot cross-over study
    Jozef Dingemans, Hanneke Eyns, Julie Willekens, Pieter Monsieurs, Rob Van Houdt, Pierre Cornelis, Anne Malfroot, Aurélie Crabbé
    European Journal of Clinical Microbiology & Infectious Diseases.2018; 37(6): 1143.     CrossRef
  • Dysbiosis, small intestinal bacterial overgrowth and biofilms in autism and chronic illness
    Anju Usman Singh
    AIMS Molecular Science.2018; 5(2): 160.     CrossRef
  • Antibiofilm effect of biofilm-dispersing agents on clinical isolates of Pseudomonas aeruginosa with various biofilm structures
    Soo-Kyoung Kim, Xi-Hui Li, Hyeon-Ji Hwang, Joon-Hee Lee
    Journal of Microbiology.2018; 56(12): 902.     CrossRef
  • Control of Biofilm Formation in Healthcare: Recent Advances Exploiting Quorum-Sensing Interference Strategies and Multidrug Efflux Pump Inhibitors
    Bindu Subhadra, Dong Ho Kim, Kyungho Woo, Surya Surendran, Chul Hee Choi
    Materials.2018; 11(9): 1676.     CrossRef
  • Printing of Patterned, Engineered E. coli Biofilms with a Low-Cost 3D Printer
    Dominik T. Schmieden, Samantha J. Basalo Vázquez, Héctor Sangüesa, Marit van der Does, Timon Idema, Anne S. Meyer
    ACS Synthetic Biology.2018; 7(5): 1328.     CrossRef
  • Thinking Outside the Box—Novel Antibacterials To Tackle the Resistance Crisis
    Markus Lakemeyer, Weining Zhao, Franziska A. Mandl, Peter Hammann, Stephan A. Sieber
    Angewandte Chemie International Edition.2018; 57(44): 14440.     CrossRef
  • Über bisherige Denkweisen hinaus – neue Wirkstoffe zur Überwindung der Antibiotika‐Krise
    Markus Lakemeyer, Weining Zhao, Franziska A. Mandl, Peter Hammann, Stephan A. Sieber
    Angewandte Chemie.2018; 130(44): 14642.     CrossRef
  • Diabetic foot infection: A critical complication
    Jennifer J Hurlow, Gavin J Humphreys, Frank L Bowling, Andrew J McBain
    International Wound Journal.2018; 15(5): 814.     CrossRef
  • Bacterial Biofilm Inhibition in the Development of Effective Anti-Virulence Strategy
    Barbara Parrino, Patrizia Diana, Girolamo Cirrincione, Stella Cascioferro
    The Open Medicinal Chemistry Journal.2018; 12(1): 84.     CrossRef
  • Alkyl-guanidine Compounds as Potent Broad-Spectrum Antibacterial Agents: Chemical Library Extension and Biological Characterization
    Carolina Pasero, Ilaria D’Agostino, Filomena De Luca, Claudio Zamperini, Davide Deodato, Giuseppina I. Truglio, Filomena Sannio, Rosita Del Prete, Teresa Ferraro, Daniela Visaggio, Arianna Mancini, Mario B. Guglielmi, Paolo Visca, Jean-Denis Docquier, Mau
    Journal of Medicinal Chemistry.2018; 61(20): 9162.     CrossRef
  • Potent effects of amino acid scanned antimicrobial peptide Feleucin-K3 analogs against both multidrug-resistant strains and biofilms of Pseudomonas aeruginosa
    Junqiu Xie, Yao Li, Jing Li, Zhibin Yan, Dan Wang, Xiaomin Guo, Jianfeng Zhang, Bangzhi Zhang, Lingyun Mou, Wenle Yang, Xianxing Jiang
    Amino Acids.2018; 50(10): 1471.     CrossRef
Journal Article
Soil pH and electrical conductivity are key edaphic factors shaping bacterial communities of greenhouse soils in Korea
Jeong Myeong Kim , An-Sung Roh , Seung-Chul Choi , Eun-Jeong Kim , Moon-Tae Choi , Byung-Koo Ahn , Sun-Kuk Kim , Young-Han Lee , Jae-Ho Joa , Seong-Soo Kang , Shin Ae Lee , Jae-Hyung Ahn , Jaekyeong Song , Hang-Yeon Weon
J. Microbiol. 2016;54(12):838-845.   Published online November 26, 2016
DOI: https://doi.org/10.1007/s12275-016-6526-5
  • 441 View
  • 0 Download
  • 132 Crossref
AbstractAbstract PDF
Soil microorganisms play an essential role in soil ecosystem processes such as organic matter decomposition, nutrient cycling, and plant nutrient availability. The land use for greenhouse cultivation has been increasing continuously, which involves an intensive input of agricultural materials to enhance productivity; however, relatively little is known about bacterial communities in greenhouse soils. To assess the effects of environmental factors on the soil bacterial diversity and community composition, a total of 187 greenhouse soil samples collected across Korea were subjected to bacterial 16S rRNA gene pyrosequencing analysis. A total of 11,865 operational taxonomic units at a 97% similarity cutoff level were detected from 847,560 sequences. Among nine soil factors evaluated; pH, electrical conductivity (EC), exchangeable cations (Ca2+, Mg2+, Na+, and K+), available P2O5, organic matter, and NO3-N, soil pH was most strongly correlated with bacterial richness (polynomial regression, pH: R2 = 0.1683, P < 0.001) and diversity (pH: R2 = 0.1765, P < 0.001). Community dissimilarities (Bray-Curtis distance) were positively correlated with Euclidean distance for pH and EC (Mantel test, pH: r = 0.2672, P < 0.001; EC: r = 0.1473, P < 0.001). Among dominant phyla (> 1%), the relative abundances of Proteobacteria, Gemmatimonadetes, Acidobacteria, Bacteroidetes, Chloroflexi, and Planctomycetes were also more strongly correlated with pH and EC values, compared with other soil cation contents, such as Ca2+, Mg2+, Na+, and K+. Our results suggest that, despite the heterogeneity of various environmental variables, the bacterial communities of the intensively cultivated greenhouse soils were particularly influenced by soil pH and EC. These findings therefore shed light on the soil microbial ecology of greenhouse cultivation, which should be helpful for devising effective management strategies to enhance soil microbial diversity and improving crop productivity.

Citations

Citations to this article as recorded by  
  • Comparison of the rhizospheric soil bacteriomes of Oryza sativa and Solanum melongena crop cultivars reveals key genes and pathways involved in biosynthesis of ectoine, lysine, and catechol meta-cleavage
    Manisha Mandal, Biswajit Ghosh, Shyamapada Mandal
    Functional & Integrative Genomics.2025;[Epub]     CrossRef
  • Dose-dependent effects of MIL-88A(Fe) and MIL-101(Fe) on arsenic immobilization and phytoremediation using ramie (Boehmeria nivea L.)
    Jian Ye, Xingyan Yin, Chunping Yang, Xiaofei Tan, Chuang Li, Gaobin Chen, Ping Chen, Qiang Chen, Mingyang Dai
    Chemical Engineering Journal.2025; 517: 164238.     CrossRef
  • Assessment of soil quality in texturally different and salt-affected soils of trans-gangetic plains of India
    Gitanjli Rathore, Vivek Sharma, Manpreet Kaur, B. B. Vashisht
    Environmental Earth Sciences.2025;[Epub]     CrossRef
  • Minimizing the potential risk of soil nitrogen loss through optimal fertilization practices in intensive agroecosystems
    Jun Wang, Lu Zhang, Kailou Liu, Boku Zhou, Hongjun Gao, Xiaori Han, Shutang Liu, Shaomin Huang, Aijun Zhang, Keke Hua, Jidong Wang, Hangwei Hu, Minggang Xu, Wenju Zhang
    Agronomy for Sustainable Development.2025;[Epub]     CrossRef
  • DNA Extraction Methodology has a Limited Impact on Multitaxa Riverine Benthic Metabarcoding Community Profiles
    Lindsay K. Newbold, Joe D. Taylor, Amy C. Thorpe, Jonathan Warren, Kerry Walsh, Daniel S. Read
    Environmental DNA.2025;[Epub]     CrossRef
  • Microbial Composition Change and Heavy Metal Accumulation in Response to Organic Fertilization Reduction in Greenhouse Soil
    Qin Qin, Jun Wang, Lijuan Sun, Shiyan Yang, Yafei Sun, Yong Xue
    Microorganisms.2025; 13(1): 203.     CrossRef
  • Effects of different plant-derived fermentation products as soil amendments on microbial community structure and mitigation of soil degradation caused by replanting
    Xinyue Miao, Pengyuan Lv, Lixiang Wang, Yi Zhou, Ergang Wang, Yu Zhan, Guixiang He, Zhiqi Liang, Jinglou Zhang, Changbao Chen, Qiong Li
    Chemical and Biological Technologies in Agriculture.2025;[Epub]     CrossRef
  • Effects of chemical fertilization on bacterial community in rhizosphere soil of sugarcane
    Qian Wang, Shang-Tao Jiang, Juan Song, Yi-Hao Kang, Jin-Lian Zhang, Ting-Su Chen, Yang-Rui Li, Mahmoud W. Yaish
    PLOS One.2025; 20(7): e0327545.     CrossRef
  • NaCl-induced soil stress regulates the diversity of soil bacteria and their ability to metabolize low molecular weight organic acids
    Adhari Al-Kalbani, Daniel Menezes-Blackburn, Jinan Waladwadi, Said Al-Ismaily, Buthaina Al-Siyabi
    Journal of the Saudi Society of Agricultural Sciences.2025;[Epub]     CrossRef
  • Analysis of the differences and driving factors of bacterial community structure and diversity in multiple habitats of the Qingshui River ecosystem in Ningxia, China
    Zengfeng Zhao, Xiaocong Qiu, Juan Yin, Ruizhi Zhao
    Ecotoxicology and Environmental Safety.2025; 303: 118947.     CrossRef
  • Regulating facility soil microbial community and reducing cadmium enrichment in lettuce by reductive soil disinfestation
    Kaining Sun, Shu Zhang, Junfeng Wang
    Frontiers in Environmental Science.2024;[Epub]     CrossRef
  • Growth Disturbance, Mineral Nutrient Imbalance, Specific Symptoms and Leaf Characteristics Changes in Two Pomegranate Cultivars Induced by Deficiencies and Excess of Ca, Mg, Zn and Fe
    Azhar Ouni, Samia Abboud, Darine Tlili, Sahar Ben Abdelwaheb, Mourad Jellali, Wafaa Bousetta, Messaoud Mars, Soumaya Dbara
    Journal of Soil Science and Plant Nutrition.2024; 24(4): 8291.     CrossRef
  • Intermediate irrigation with low fertilization promotes soil nutrient cycling and reduces CO2 and CH4 emissions via regulating fungal communities in arid agroecosystems
    Wancai Wang, Zhencheng Ye, Jing Li, Guobin Liu, Qixiao Wu, Zhaoyang Wang, Guoqin He, Wende Yan, Chao Zhang
    Journal of Environmental Management.2024; 351: 119688.     CrossRef
  • Alpine wetlands degradation leads to soil nutrient imbalances that affect plant growth and microbial diversity
    Ganjun Xu, Xiaoming Kang, Fei Wang, Weirong Zhuang, Wende Yan, Kerou Zhang
    Communications Earth & Environment.2024;[Epub]     CrossRef
  • Continuous cropping obstacles of medicinal plants: Focus on the plant-soil-microbe interaction system in the rhizosphere
    Jiameng Liao, Pengguo Xia
    Scientia Horticulturae.2024; 328: 112927.     CrossRef
  • Agricultural ecosystems rather than fertilization strategies drives structure and composition of the ureolytic microbial functional guilds
    Na Lv, Ping Gong, Hao Sun, Xiangxin Sun, Zhiguang Liu, Xueshi Xie, Yan Xue, Yuchao Song, Kaikuo Wu, Tingting Wang, Zhijie Wu, Lili Zhang
    Journal of Environmental Management.2024; 372: 123148.     CrossRef
  • Effects of reductive soil disinfestation combined with different types of organic materials on the microbial community and functions
    Yu Zhan, Yi Zhou, Ergang Wang, Xinyue Miao, Tingting Zhou, Ning Yan, Changbao Chen, Qiong Li, Wenli Chen
    Microbiology Spectrum.2024;[Epub]     CrossRef
  • Monitoring of indicators and bacterial succession in organic-amended technosols for the restoration of semiarid ecosystems
    Rocío Soria, Raúl Ortega, Nicolás Valiente, Natalia Rodríguez-Berbel, Manuel Esteban Lucas-Borja, Isabel Miralles
    Science of The Total Environment.2024; 954: 176302.     CrossRef
  • Contrasting responses of α- and β-multifunctionality to aboveground plant community in the Qinghai-Tibet Plateau
    Xia Zhao, Hanwen Cui, Hongxian Song, Jingwei Chen, Jiajia Wang, Ziyang Liu, Izhar Ali, Zi Yang, Xiao Hou, Xianhui Zhou, Sa Xiao, Shuyan Chen
    Science of The Total Environment.2024; 917: 170464.     CrossRef
  • Vermicompost Supply Enhances Fragrant-Rice Yield by Improving Soil Fertility and Eukaryotic Microbial Community Composition under Environmental Stress Conditions
    Anas Iqbal, Quaid Hussain, Zhaowen Mo, Tian Hua, Abd El-Zaher M. A. Mustafa, Xiangru Tang
    Microorganisms.2024; 12(6): 1252.     CrossRef
  • Substation of vermicompost mitigates Cd toxicity, improves rice yields and restores bacterial community in a Cd-contaminated soil in Southern China
    Anas Iqbal, Jiang Ligeng, Zhaowen Mo, Muhammad Adnan, Rattan Lal, Maid Zaman, Sayed Usman, Tian Hua, Muhammad Imran, Sheng-Gang Pan, Jian-Ying Qi, Meiyang Duan, Qichang Gu, Xiangru Tang
    Journal of Hazardous Materials.2024; 465: 133118.     CrossRef
  • Assembly of root-associated bacterial community and soil health in cadmium-contaminated soil affected by nano/bulk-biochar compost associations
    Qizhen Liu, Zhiqin Chen, Dan He, Ancao Pan, Jie yuan, Yaru Liu, Lukuan Huang, Ying Feng
    Environmental Pollution.2024; 360: 124619.     CrossRef
  • Unravelling the influence of microplastics with/without additives on radish (Raphanus sativus) and microbiota in two agricultural soils differing in pH
    Jun Meng, Chengmei Diao, Zhonghua Cui, Zhangtao Li, Jiayi Zhao, Haibo Zhang, Minjun Hu, Jun Xu, Yugen Jiang, Ghulam Haider, Dong Yang, Shengdao Shan, Huaihai Chen
    Journal of Hazardous Materials.2024; 478: 135535.     CrossRef
  • Unveiling soil bacterial ecosystems in andean citrus orchards of Santander, Colombia
    Genis Andrés Castillo-Villamizar, Valentina Tapia-Perdomo, Julieth Maldonado-Pava, Pedro Santamaría-Gálvis, Lizbeth Sayavedra, Jorge Hernandez-Torres, Edinson Puentes-Cala
    Frontiers in Ecology and Evolution.2024;[Epub]     CrossRef
  • Analysis of microbial communities in wheat, alfalfa, and oat crops after Tilletia laevis Kühn infection
    Yuyang Shen, Chen Delai, Taiguo Liu, Wanquan Chen, Guangkuo Li, Haifeng Gao, Li Gao
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • Uptake and translocation of fungicide picarbutrazox in greenhouse cabbage: the significance of translocation factors and home processing
    Ye-Jin Heo, Se-Yeon Kwak, Aniruddha Sarker, Sang-Hyeob Lee, Jae-Won Choi, Ji-Eun Oh, Lawal Abdulkareem, Jang-Eok Kim
    Environmental Science and Pollution Research.2023; 30(14): 40919.     CrossRef
  • Limitations of biofertilizers and their revitalization through nanotechnology
    Pradeep Kumar Rai, Anuradha Rai, Naveen Kumar Sharma, Tarunendu Singh, Yogendra Kumar
    Journal of Cleaner Production.2023; 418: 138194.     CrossRef
  • New interactive functional indicator approach for river health assessment in an Asian temperate river: Comprehensive analysis of water chemistry, physical habitat, land use, and the biological disturbance of invasive alien species
    Namsrai Jargal, Jeong-Eun Kim, Kwang-Guk An
    Ecological Indicators.2023; 157: 111212.     CrossRef
  • Response of the Soil Fungal Community and Its Function during the Conversion of Forestland to Tea Plantations: A Case Study in Southeast China
    Feng Wang, Yuzhen Chen, Xiaomin Yu, Wenquan Yu, Zhiming You, Zhenbiao Yang
    Forests.2023; 14(2): 209.     CrossRef
  • Differences in bacterial community composition, structure and function between sediments in waterways and non-navigable channels in a plain river network area
    Yixin Ma, Zulin Hua, Peng Wang, Liang Yu, Ying Lu, Yifan Wang, Yueyang Dong
    Environmental Science and Pollution Research.2023; 30(16): 45910.     CrossRef
  • Depth-Dependent Distribution of Prokaryotes in Sediments of the Manganese Crust on Nazimov Guyots of the Magellan Seamounts
    Jianxing Sun, Hongbo Zhou, Haina Cheng, Zhu Chen, Jichao Yang, Yuguang Wang, Chunlei Jing
    Microbial Ecology.2023; 86(4): 3027.     CrossRef
  • Predicting microbial responses to changes in soil physical and chemical properties under different land management
    Sara Sadeghi, Billi Jean Petermann, Joshua J. Steffan, Eric C. Brevik, Csongor Gedeon
    Applied Soil Ecology.2023; 188: 104878.     CrossRef
  • Bacterial and archaeal communities in saline soils from a Los Negritos geothermal area in Mexico
    Joseph GUEVARA-LUNA, Mario HERNÁNDEZ-GUZMÁN, Nina MONTOYA-CIRIACO, Luc DENDOOVEN, Marina Olivia FRANCO-HERNÁNDEZ, Paulina ESTRADA-DE LOS SANTOS, María Soledad VÁSQUEZ-MURRIETA
    Pedosphere.2023; 33(2): 312.     CrossRef
  • Heavy Metal Distribution and Microbial Diversity of the Surrounding Soil and Tailings of Two Cu Mines in China
    Yu Xia, Jing Liu, Jie Chang, Weijia Li, Kaiyu Xia, Zilong Liu, Yizhen Liu, Xuwen He
    Water, Air, & Soil Pollution.2023;[Epub]     CrossRef
  • Phosphorus addition modifies the bacterial community structure in rhizosphere of Achnatherum inebrians by influencing the soil properties and modulates the Epichloë gansuensis-mediated root exudate profiles
    Chao Wang, Jianfeng Wang, Xueli Niu, Yang Yang, Kamran Malik, Jie Jin, Chengzhou Zhao, Rong Tang, Rong Zheng, Rong Huang
    Plant and Soil.2023; 491(1-2): 543.     CrossRef
  • Effects of 13C isotope-labeled allelochemicals on the growth of the invasive plant Alternanthera philoxeroides
    Zexun Hua, Qingsong Xie, Yue Li, Mengying He, Yan Wang, Hongmiao Wu, Zhen Zhang
    Scientific Reports.2023;[Epub]     CrossRef
  • Development of rapid and precise approach for quantification of bacterial taxa correlated with soil health
    Taghreed Khaled Abdelmoneim, Mahmoud S. M. Mohamed, Ismail Abdelshafy Abdelhamid, Sara Fareed Mohamed Wahdan, Mohamed A. M. Atia
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Plant ash prevents acid mine drainage from sulfur-bearing tailings through multiple actions — A low-cost alkaline material
    Jun Zeng, Jinrong Qiu, Jun Zhang, Yuqi Qi, Rentao Liu, Chuanqi Jian, Na Liu, Yaoming Su
    Applied Geochemistry.2023; 155: 105702.     CrossRef
  • Natural restoration alters soil microbial community structure, but has contrasting effects on the diversity of bacterial and fungal assemblages in salinized grasslands
    Weina Wang, Huanjun Liu, Lifei Chen, Kadri Koorem, Yingchao Hu, Liang-Jun Hu
    Science of The Total Environment.2023; 891: 164726.     CrossRef
  • Spatial controls of methane uptake in upland soils across climatic and geological regions in Greenland
    Ludovica D’Imperio, Bing-Bing Li, James M. Tiedje, Youmi Oh, Jesper Riis Christiansen, Sebastian Kepfer-Rojas, Andreas Westergaard-Nielsen, Kristian Koefoed Brandt, Peter E. Holm, Peiyan Wang, Per Ambus, Bo Elberling
    Communications Earth & Environment.2023;[Epub]     CrossRef
  • Comparative Analysis of Microbial Community Characteristic of Acidic and Neutral Soils in Korean Orchards
    Do-Hyun Kim, Ji Yong Moon, Soo Young Hong, Hyeonmo Ahn, Yeo Wook Yoon, Hyo Jin Kim, So Youn Lee, Ji Won Kim, Eun-heui Han, Sang Yoon Kim, Eunjin Lee, Hang-Yeon Weon, Ho-Jong Ju
    Korean Journal of Soil Science and Fertilizer.2023; 56(4): 449.     CrossRef
  • Application of bovine bone meal and oyster shell meal to heavy metals polluted soil: Vegetable safety and bacterial community
    Xiongkai Zheng, Bowen Zhang, Weibin Lai, Mengting Wang, Xueqin Tao, Mengyao Zou, Jiangmin Zhou, Guining Lu
    Chemosphere.2023; 313: 137501.     CrossRef
  • Soil Bacterial Community Structure and Physicochemical Influencing Factors of Artificial Haloxylon ammodendron Forest in the Sand Blocking and Fixing Belt of Minqin, China
    Anlin Wang, Rui Ma, Yanjun Ma, Danni Niu, Teng Liu, Yongsheng Tian, Zhenghu Dong, Qiaodi Chai
    Forests.2023; 14(11): 2244.     CrossRef
  • Relationships between Rhizosphere Environments and Growth of 10-Year-Old Wild-Simulated Ginseng
    Yeong-Bae Yun, Kiyoon Kim, Jeong-Hoon Huh, Yurry Um
    Agronomy.2023; 13(5): 1313.     CrossRef
  • Effect comparisons of different conditioners and microbial agents on the degradation of estrogens during dairy manure composting
    Yan Li, Dong Zeng, Xiao-Lu Jiang, De-Chun He, Jia-Wu Hu, Zi-Wei Liang, Jia-Cheng Wang, Wang-Rong Liu
    Chemosphere.2023; 345: 140312.     CrossRef
  • Effects of continuous cropping Jiashi muskmelon on rhizosphere microbial community
    Jilian Wang, Mingyuan Li, Qian Zhou, Tian Zhang
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Does biochar addition improve soil physicochemical properties, bacterial community and alfalfa growth for saline soils?
    Yang Chen, Yuan Qiu, Xinmei Hao, Ling Tong, Sien Li, Shaozhong Kang
    Land Degradation & Development.2023; 34(11): 3314.     CrossRef
  • The Response of Soil Bacterial Communities to Cropping Systems in Saline–Alkaline Soil in the Songnen Plain
    Xiaoqian Liu, Junnan Ding, Jingyang Li, Dan Zhu, Bin Li, Bohan Yan, Lina Mao, Guangyu Sun, Lei Sun, Xin Li
    Agronomy.2023; 13(12): 2984.     CrossRef
  • Evaluation of a subtropical maize-rice rotation system maintained under long-term fertilizer inputs for sustainable intensification of agriculture
    Asif Hameed, Yu-Pei Chen, Fo-Ting Shen, Shih-Yao Lin, Hsin-I Huang, Yu-Wen Lin, Chiu-Chung Young
    Applied Soil Ecology.2023; 184: 104772.     CrossRef
  • Metagenomic analysis displays the potential predictive biodegradation pathways of the persistent pesticides in agricultural soil with a long record of pesticide usage
    Muneer Ahmad Malla, Anamika Dubey, Ashwani Kumar, Shweta Yadav
    Microbiological Research.2022; 261: 127081.     CrossRef
  • Soil microbial community responses to the application of a combined amendment in a historical zinc smelting area
    Chuanjiang Tan, Youfa Luo, Tianling Fu
    Environmental Science and Pollution Research.2022; 29(9): 13056.     CrossRef
  • Elevated CO2 affects the rhizosphere microbial community and the growth of two invader plant species differently in semiarid Mediterranean soils
    Fuensanta Caravaca, Pilar Torres, Gisela Díaz, Antonio Roldán
    Land Degradation & Development.2022; 33(1): 117.     CrossRef
  • Selective Enrichment Method for Isolation of Efficient Phosphate Solubilizing Bacteria from Soil
    Patel HK, Vyas RV, Shelat HN
    Communications in Soil Science and Plant Analysis.2022; 53(12): 1532.     CrossRef
  • Impact of hexachlorocyclohexane addition on the composition and potential functions of the bacterial community in red and purple paddy soil
    Jian Wang, Kaidi Tang, Xiaojie Hu, Hefei Wang, Fredrick Owino Gudda, Emmanuel Stephen Odinga, Hassan El-Ramady, Wanting Ling
    Environmental Pollution.2022; 297: 118795.     CrossRef
  • Remediation of Cd-, Pb-, Cu-, and Zn-contaminated soil using cow bone meal and oyster shell meal
    Xiongkai Zheng, Mengyao Zou, Bowen Zhang, Weibin Lai, Xianming Zeng, Siyuan Chen, Mengting Wang, Xiaoyun Yi, Xueqin Tao, Guining Lu
    Ecotoxicology and Environmental Safety.2022; 229: 113073.     CrossRef
  • The spatio-chronological distribution of Achnatherum splendens influences soil bacterial communities in degraded grasslands
    Chao Yang, Kangjia Li, Jipeng Sun, Weiyi Ye, Hao Lin, Yuze Yang, Yiran Zhao, Guofeng Yang, Zengyu Wang, Guihe Liu, Guomin Yu, Juan Sun
    CATENA.2022; 209: 105828.     CrossRef
  • Metagenomic analysis of bacterial communities of Wadi Namar Lake, Riyadh, Saudi Arabia
    Modhi O. Alotaibi, Afrah E. Mohammed, Kamal H. Eltom
    Saudi Journal of Biological Sciences.2022; 29(5): 3749.     CrossRef
  • In situ restoration of soil ecological function in a coal gangue reclamation area after 10 years of elm/poplar phytoremediation
    Dong-sheng Bai, Xu Yang, Jin-long Lai, Yi-wang Wang, Yu Zhang, Xue-gang Luo
    Journal of Environmental Management.2022; 305: 114400.     CrossRef
  • Antibiotic resistance genes alternation in soils modified with neutral and alkaline salts: interplay of salinity stress and response strategies of microbes
    Yi Xu, Guoxiang You, Mairan Zhang, Dengyun Peng, Zewei Jiang, Suting Qi, Shihong Yang, Jun Hou
    Science of The Total Environment.2022; 809: 152246.     CrossRef
  • Hiệu quả của phân hữu cơ phối trộn tươi từ bèo hoa dâu (Azolla carolinian) và các vật liệu hữu cơ khác lên sinh trưởng và năng suất lúa trên nền đất nhiễm mặn ở điều kiện nhà lưới
    Cao Thơ Nguyễn, Võ Hải Đường Trần, Khởi Nghĩa Nguyễn
    Can Tho University Journal of Science.2022; 58(4): 143.     CrossRef
  • Distribution of Burkholderia pseudomallei within a 300-cm deep soil profile: implications for environmental sampling
    Khemngeun Pongmala, Alain Pierret, Priscia Oliva, Anne Pando, Viengmon Davong, Sayaphet Rattanavong, Norbert Silvera, Manophab Luangraj, Laurie Boithias, Khampaseuth Xayyathip, Ludovic Menjot, Melina Macouin, Emma Rochelle-Newall, Henri Robain, Amphone Vo
    Scientific Reports.2022;[Epub]     CrossRef
  • Influence of Rosaceous Species and Driving Factors on Differentiation of Rhizospheric Bacteria in a Deciduous Broad-Leaved Forest
    Yukun Wang, Yuran He, Mao Ding, Zhi Wang, Shoubiao Zhou
    Current Microbiology.2022;[Epub]     CrossRef
  • The Deterioration of Agronomical Traits of the Continuous Cropping of Stevia Is Associated With the Dynamics of Soil Bacterial Community
    Xinjuan Xu, Qingyun Luo, Qichao Wei, Shangtao Jiang, Caixia Dong, Mohammad Omar Faruque, Zhongwen Huang, Zhenghua Xu, Changxi Yin, Zaibiao Zhu, Xuebo Hu
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Cu and Zn exert a greater influence on antibiotic resistance and its transfer than doxycycline in agricultural soils
    Na Li, Jianguo Chen, Chong Liu, Jiaxun Yang, Changxiong Zhu, Hongna Li
    Journal of Hazardous Materials.2022; 423: 127042.     CrossRef
  • Assessment of Fertilizer Quality in Horse Waste-Based Bokashi Fertilizer Formulations
    Auwalu Garba Gashua, Zulkefly Sulaiman, Martini Mohammad Yusoff, Mohd Yusoff Abd Samad, Mohd Fauzi Ramlan, Monsuru Adekunle Salisu
    Agronomy.2022; 12(4): 937.     CrossRef
  • Effects of earthworms and arbuscular mycorrhizal fungi on improvement of fertility and microbial communities of soils heavily polluted by cadmium
    Gen Wang, Li Wang, Fang Ma
    Chemosphere.2022; 286: 131567.     CrossRef
  • Bacterial Community with Plant Growth-Promoting Potential Associated to Pioneer Plants from an Active Mexican Volcanic Complex
    Clara Ivette Rincón-Molina, Esperanza Martínez-Romero, José Luis Aguirre-Noyola, Luis Alberto Manzano-Gómez, Adalberto Zenteno-Rojas, Marco Antonio Rogel, Francisco Alexander Rincón-Molina, Víctor Manuel Ruíz-Valdiviezo, Reiner Rincón-Rosales
    Microorganisms.2022; 10(8): 1568.     CrossRef
  • Influences of land reclamation on soil bacterial communities of abandoned salt pans in the Yellow River Delta
    Yihao Zhu, Xiliang Song, Xiaoli Liu, Weifeng Chen, Xuchang Niu, Weizhi Zhou
    Land Degradation & Development.2022; 33(16): 3231.     CrossRef
  • Physico-Chemical and microbiological analysis of the loopspruit river, north west province: A metagenomic approach
    Lohan Bredenhann, Daniel La Grange, Carlos Bezuidenhout, Lesego Molale-Tom
    Water Supply.2022;[Epub]     CrossRef
  • Long-Term Effect of Alkali and Partially Neutralized Irrigation Water on Soil Quality
    Awtar Singh, Arvind Kumar, Rajender Kumar Yadav, Paramjit Singh Minhas, Upasana Saini
    Journal of Soil Science and Plant Nutrition.2022; 22(2): 1252.     CrossRef
  • Impacts of disinfected wastewater irrigation on soil characteristics, microbial community composition, and crop yield
    Lays Paulino Leonel, Ariane Bize, Mahendra Mariadassou, Cédric Midoux, Jerusa Schneider, Adriano Luiz Tonetti
    Blue-Green Systems.2022; 4(2): 247.     CrossRef
  • Reduced Chemical Fertilizer Combined With Bio-Organic Fertilizer Affects the Soil Microbial Community and Yield and Quality of Lettuce
    Ning Jin, Li Jin, Shuya Wang, Jinwu Li, Fanhong Liu, Zeci Liu, Shilie Luo, Yue Wu, Jian Lyu, Jihua Yu
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Optimization of carriers and packaging for effective biofertilizers to enhance Oryza sativa L. growth in paddy soil
    Jakkapan Sakpirom, Tomorn Nunkaew, Eakalak Khan, Duangporn Kantachote
    Rhizosphere.2021; 19: 100383.     CrossRef
  • Improved immobilization of soil cadmium by regulating soil characteristics and microbial community through reductive soil disinfestation
    Xin Li, Xuefeng Li, Yueyue Li, Xiongze Dai, Qingzhuang Zhang, Mi Zhang, Zhuqing Zhang, Yu Tao, Wenchao Chen, Mingxing Zhang, Xiangyu Zhou, Sha Yang, Yanqing Ma, Mostafa Zhran, Xuexiao Zou
    Science of The Total Environment.2021; 778: 146222.     CrossRef
  • Soil bacterial community functions and distribution after mining disturbance
    Enzong Xiao, Zengping Ning, Tangfu Xiao, Weimin Sun, Shiming Jiang
    Soil Biology and Biochemistry.2021; 157: 108232.     CrossRef
  • Pilot Study of Eco-Physiological Pepper Responses to Starfish-Based Organic Soil Amendments in Open-Field and Greenhouse Cultivations
    Hyun-Sug Choi
    Horticulturae.2021; 7(10): 344.     CrossRef
  • Effects of the Denitrification Inhibitor “Procyanidins” on the Diversity, Interactions, and Potential Functions of Rhizosphere-Associated Microbiome
    Mylène Hugoni, William Galland, Solène Lecomte, Maxime Bruto, Mohamed Barakat, Florence Piola, Wafa Achouak, Feth el Zahar Haichar
    Microorganisms.2021; 9(7): 1406.     CrossRef
  • Prospective usage of magnesium potassium phosphate cement combined with Bougainvillea alba derived biochar to reduce Pb bioavailability in soil and its uptake by Spinacia oleracea L
    Iqbal Naeem, Nasir Masood, Veysel Turan, Muhammad Iqbal
    Ecotoxicology and Environmental Safety.2021; 208: 111723.     CrossRef
  • Impacto ambiental del vertimiento de aguas servidas en aglomerados urbanos ilegales del municipio de Villavicencio, Colombia
    Fabián Dario Cuadros Segura, Alvaro Javier Moyano Salcedo, Adrian Mateo Pabon Laverde, Jassbleydi Valentina Trujillo Arias
    Tecnura.2021; 25(68): 43.     CrossRef
  • Efficacy of chitosan-coated textile waste biochar applied to Cd-polluted soil for reducing Cd mobility in soil and its distribution in moringa (Moringa oleifera L.)
    Muhammad Zubair, Pia Muhammad Adnan Ramzani, Bilal Rasool, Muhammad Asaf Khan, Mahmood ur-Rahman, Imran Akhtar, Veysel Turan, Hafiz Muhammad Tauqeer, Muniba Farhad, Shahbaz Ali Khan, Javed Iqbal, Muhammad Iqbal
    Journal of Environmental Management.2021; 284: 112047.     CrossRef
  • The effects of vermicompost and shell powder addition on Cd bioavailability, enzyme activity and bacterial community in Cd-contaminated soil: A field study
    Feng Wang, Weiwen Zhang, Lijuan Miao, Tianwei Ji, Yifan Wang, Hangjun Zhang, Ying Ding, Weiqin Zhu
    Ecotoxicology and Environmental Safety.2021; 215: 112163.     CrossRef
  • Diversity, structure, and composition of plant growth-promoting bacteria in soil from Brazilian Cerrado
    Jailson do Nascimento Silva, Lucas William Mendes, Jadson Emanuel Lopes Antunes, Vania Maria Maciel Melo, Francisca Andrea da Silva Oliveira, Angela Celis de Almeida Lopes, Veronica Brito da Silva, Arthur Prudêncio de Araujo Pereira, Sergio Emilio Santos
    Rhizosphere.2021; 20: 100435.     CrossRef
  • Bioaccumulation of heavy metals in Stachys inflata and Scariola orientalis affected by particulate matters of a cement factory in central Iran
    Hossein Moradi, Mohammad Abbasi, Mohsen Soleimani
    Environmental Science and Pollution Research.2021; 28(32): 44098.     CrossRef
  • Changes in rhizosphere microbial diversity and composition due to NaCl addition to the soil modify the outcome of maize-weed interactions
    Larissa Cassemiro Pacheco Monteiro, Christiano da Conceição de Matos, Amarilson de Oliveira Cândido, Tiago Antônio de Oliveira Mendes, Mateus Ferreira Santana, Maurício Dutra Costa
    Applied Soil Ecology.2021; 159: 103818.     CrossRef
  • Different Responses of Soil Environmental Factors, Soil Bacterial Community, and Root Performance to Reductive Soil Disinfestation and Soil Fumigant Chloropicrin
    Yu Zhan, Ning Yan, Xinyue Miao, Qiong Li, Changbao Chen
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Farmer Friendly Options for Sterilizing Farm Tools for the Control of Xanthomonas Wilt Disease of Banana
    Walter Ocimati, Anthony Fredrick Tazuba, Guy Blomme
    Frontiers in Agronomy.2021;[Epub]     CrossRef
  • Green Fluorescent Protein-Tagged Bacillus axarquiensis TUBP1 Reduced Cotton Verticillium Wilt Incidence by Altering Soil Rhizosphere Microbial Communities
    Chang Gao, Bo Wang, Guo-cai Ma, Hong Zeng
    Current Microbiology.2021; 78(9): 3562.     CrossRef
  • Effect of Bacillus mesonae H20-5 Treatment on Rhizospheric Bacterial Community of Tomato Plants under Salinity Stress
    Shin Ae Lee, Hyeon Su Kim, Mee Kyung Sang, Jaekyeong Song, Hang-Yeon Weon
    The Plant Pathology Journal.2021; 37(6): 662.     CrossRef
  • Study on the Rhizosphere Soil Microbial Community Structure Associated with Five Land Use Types in Jinchuan Mining Area
    Tian-Peng Gao, Jing-Wen Fu, Ming-Bo Zuo, Yu-Bing Liu, Dang-Hui Xu, Guo-Hua Chang, Xi-Sheng Tai, Bing Yue, Zhuo-Xin Yin, Qing Zhang, R. Weerasinghe, C. Fang
    E3S Web of Conferences.2021; 237: 01010.     CrossRef
  • Chemical fertilizer reduction with organic fertilizer effectively improve soil fertility and microbial community from newly cultivated land in the Loess Plateau of China
    Jianqiao Han, Yunyun Dong, Man Zhang
    Applied Soil Ecology.2021; 165: 103966.     CrossRef
  • Rhizosphere Microbiome Regulates the Growth of Mustard under Organic Greenhouse Cultivation
    Ting-Chung Liu, Hui-Mei Peng, Seth Wollney, Chang-Hui Shen
    Agriculture.2021; 11(10): 987.     CrossRef
  • Culture-dependent and culture-independent characterization of bacterial community diversity in different types of sandy lands: the case of Minqin County, China
    Yali Wei, Fang Wang, Jiangli Gao, Yaolong Huang, Wei Ren, Hongmei Sheng
    BMC Microbiology.2021;[Epub]     CrossRef
  • Application of wood ash leads to strong vertical gradients in soil pH changing prokaryotic community structure in forest top soil
    Toke Bang-Andreasen, Mette Peltre, Lea Ellegaard-Jensen, Lars Hestbjerg Hansen, Morten Ingerslev, Regin Rønn, Carsten Suhr Jacobsen, Rasmus Kjøller
    Scientific Reports.2021;[Epub]     CrossRef
  • Effects of an additive (hydroxyapatite–bentonite–biochar) on Cd and Pb stabilization and microbial community composition in contaminated vegetable soil
    Di Zhang, Ting Li, Aifang Ding, Xiaoxia Wu
    RSC Advances.2021; 11(20): 12200.     CrossRef
  • The effect of Soil properties on the Biological Diversity of Fungi in Soil University of Anbar.
    Wijdan Ahmed Ali, Rahaf Haineed Hussein, Wafaa Tali Radef
    Journal of Physics: Conference Series.2021; 2114(1): 012068.     CrossRef
  • Effects of continuous cropping of Pinellia ternata (Thunb.) Breit. on soil physicochemical properties, enzyme activities, microbial communities and functional genes
    Yuan Zhao, Xiao–Meng Qin, Xue–Ping Tian, Tao Yang, Rong Deng, Jun Huang
    Chemical and Biological Technologies in Agriculture.2021;[Epub]     CrossRef
  • Effects of microbial bio-fertilizers on soil physicochemical properties under different soil water regimes in greenhouse grown eggplant (Solanum Melongena L.)
    Zeynep Demir
    Communications in Soil Science and Plant Analysis.2020; 51(14): 1888.     CrossRef
  • Rare rather than abundant microbial communities drive the effects of long-term greenhouse cultivation on ecosystem functions in subtropical agricultural soils
    Mengdi Xue, Zhiying Guo, Xinyun Gu, Hailun Gao, Shimei Weng, Jing Zhou, Daguo Gu, Huixiang Lu, Xiaoqi Zhou
    Science of The Total Environment.2020; 706: 136004.     CrossRef
  • Electrophysical and geoinformational methods of mapping the biological properties of peats
    Antonina D. Pozdnyakova, Lev A. Pozdnyakov
    Dokuchaev Soil Bulletin.2020; (103): 149.     CrossRef
  • Chitosan with Bentonite and Biochar in Ni-Affected Soil Reduces Grain Ni Concentrations, Improves Soil Enzymes and Grain Quality in Lentil
    Hafiz Syed Tanzeem-ul-Haq, Bilal Rasool, Syed Ehtisham-ul-Haque, Sadia Saif, Sadia Zafar, Tahira Younis, Imran Akhtar, Laila Jafri, Naeem Iqbal, Nasir Masood, Karolina Lewińska, Muhammad Iqbal
    Minerals.2020; 11(1): 11.     CrossRef
  • Structural and functional responses of bacterial and fungal communities to multiple heavy metal exposure in arid loess
    Xiao-Ying Zeng, Shi-Weng Li, Yan Leng, Xiao-Hu Kang
    Science of The Total Environment.2020; 723: 138081.     CrossRef
  • Role of biochar and organic substrates in enhancing the functional characteristics and microbial community in a saline soil
    M.R.K. Manasa, Naveen Reddy Katukuri, Sree Sankar Darveekaran Nair, Yang Haojie, Zhiman Yang, Rong bo Guo
    Journal of Environmental Management.2020; 269: 110737.     CrossRef
  • Differences of the microbial community structures and predicted metabolic potentials in the lake, river, and wetland sediments in Dongping Lake Basin
    Jiaohui Fang, Ruirui Yang, Qingqing Cao, Junyu Dong, Changchao Li, Quan Quan, Miansong Huang, Jian Liu
    Environmental Science and Pollution Research.2020; 27(16): 19661.     CrossRef
  • Utilization of marigold (Tagetes erecta) flower fermentation wastewater as a fertilizer and its effect on microbial community structure in maize rhizosphere and non-rhizosphere soil 
    Hongwei Liu, Yana Wang, Cong Liang, Qingxia Yang, Shuai Wang, Buqing Wang, Feiyan Zhang, Liping Zhang, Huicai Cheng, Shuishan Song, Liping Zhang
    Biotechnology & Biotechnological Equipment.2020; 34(1): 522.     CrossRef
  • Responses of a semi-natural grassland community of tropical region to elevated ozone: An assessment of soil dynamics and biomass accumulation
    Tsetan Dolker, Arideep Mukherjee, Shashi Bhushan Agrawal, Madhoolika Agrawal
    Science of The Total Environment.2020; 718: 137141.     CrossRef
  • Analysis of bacterial and fungal communities in continuous-cropping ramie (Boehmeria nivea L. Gaud) fields in different areas in China
    Yanzhou Wang, Xiaomin Xu, Touming Liu, Hongwu Wang, Yan Yang, Xiaorong Chen, Siyuan Zhu
    Scientific Reports.2020;[Epub]     CrossRef
  • Diversity of rhizosphere and endophytic fungi in Atractylodes macrocephala during continuous cropping
    Bo Zhu, Jianjun Wu, Qingyong Ji, Wei Wu, Shihui Dong, Jiayan Yu, Qiaoyan Zhang, Luping Qin
    PeerJ.2020; 8: e8905.     CrossRef
  • The invader Carpobrotus edulis promotes a specific rhizosphere microbiome across globally distributed coastal ecosystems
    G. Rodríguez-Caballero, F. Caravaca, G. Díaz, P. Torres, A. Roldán
    Science of The Total Environment.2020; 719: 137347.     CrossRef
  • Variation in the composition of the microbial community in the rhizosphere of potato plants depending on cropping season, cultivar type, and plant development stage
    Rania AYDİ BEN ABDALLAH, Hayfa JABNOUN-KHİAREDDİNE, Mejda DAAMİ-REMADİ
    International Journal of Agriculture Environment and Food Sciences.2020; 4(3): 319.     CrossRef
  • Different types of agricultural land use drive distinct soil bacterial communities
    Shin Ae Lee, Jeong Myeong Kim, Yiseul Kim, Jae-Ho Joa, Seong-Soo Kang, Jae-Hyung Ahn, Mincheol Kim, Jaekyeong Song, Hang-Yeon Weon
    Scientific Reports.2020;[Epub]     CrossRef
  • Total RNA sequencing reveals multilevel microbial community changes and functional responses to wood ash application in agricultural and forest soil
    Toke Bang-Andreasen, Muhammad Zohaib Anwar, Anders Lanzén, Rasmus Kjøller, Regin Rønn, Flemming Ekelund, Carsten Suhr Jacobsen
    FEMS Microbiology Ecology.2020;[Epub]     CrossRef
  • Changes in soil microbial communities at Jinsha earthen site are associated with earthen site deterioration
    Jing Li, Xiaoyue Zhang, Lin Xiao, Ke Liu, Yue Li, Ziwei Zhang, Qiang Chen, Xiaolin Ao, Decong Liao, Yunfu Gu, Menggen Ma, Xiumei Yu, Quanju Xiang, Ji Chen, Xiaoping Zhang, Tao Yang, Petri Penttinen, Ke Zhao
    BMC Microbiology.2020;[Epub]     CrossRef
  • Microbial Diversity of Some Sabkha and Desert Sites in Saudi Arabia
    Modhi O. Alotaibi, Hana S. Sonbol, Suaad S. Alwakeel, Rasha S. Suliman, Ramy A. Fodah, Ahmad S. Abu Jaffal, Nouf I. AlOthman, Afrah E. Mohammed
    Saudi Journal of Biological Sciences.2020; 27(10): 2778.     CrossRef
  • Responses of the rhizosphere bacterial community in acidic crop soil to pH: Changes in diversity, composition, interaction, and function
    Wenjie Wan, Jiadan Tan, Yi Wang, Yin Qin, Huangmei He, Huiqin Wu, Wenlong Zuo, Donglan He
    Science of The Total Environment.2020; 700: 134418.     CrossRef
  • Decrease in diversity and shift in composition of the soil bacterial community were closely related to high available phosphorus in agricultural Fluvisols of North China
    Chenxu Liu, Xiaorong Zhao, Qimei Lin, Guitong Li
    Acta Agriculturae Scandinavica, Section B — Soil & Plant Science.2019; 69(7): 618.     CrossRef
  • Soil aggregates regulate the impact of soil bacterial and fungal communities on soil respiration
    Chao Yang, Nan Liu, Yingjun Zhang
    Geoderma.2019; 337: 444.     CrossRef
  • Bacterial community variations in paddy soils induced by application of veterinary antibiotics in plant-soil systems
    Misbah Uddin, Jingwen Chen, Xianliang Qiao, Run Tian, Yasir Arafat, Xiaojing Yang
    Ecotoxicology and Environmental Safety.2019; 167: 44.     CrossRef
  • Effects of recent fire on soil conditions and nutrient use of a native and an invasive grass in the Brazilian savanna
    Erico Fernando Lopes Pereira-Silva, Elisa Hardt, Murilo Bellato Biral, Victor Camargo Keller, Welington Braz Carvalho Delitti
    Écoscience.2019; 26(4): 359.     CrossRef
  • Identification of Microbial Profiles in Heavy-Metal-Contaminated Soil from Full-Length 16S rRNA Reads Sequenced by a PacBio System
    Moonsuk Hur, Soo-Je Park
    Microorganisms.2019; 7(9): 357.     CrossRef
  • Effects of Pretreatment Methods of Wheat Straw on Adsorption of Cd(II) from Waterlogged Paddy Soil
    Mengjie Wu, Hongyu Liu, Chunping Yang
    International Journal of Environmental Research and Public Health.2019; 16(2): 205.     CrossRef
  • A preliminary examination of bacterial, archaeal, and fungal communities inhabiting different rhizocompartments of tomato plants under real-world environments
    Shin Ae Lee, Yiseul Kim, Jeong Myeong Kim, Bora Chu, Jae-Ho Joa, Mee Kyung Sang, Jaekyeong Song, Hang-Yeon Weon
    Scientific Reports.2019;[Epub]     CrossRef
  • Soil Salinity and pH Drive Soil Bacterial Community Composition and Diversity Along a Lateritic Slope in the Avon River Critical Zone Observatory, Western Australia
    Flora J. M. O’Brien, Maya Almaraz, Melissa A. Foster, Alice F. Hill, David P. Huber, Elizabeth K. King, Harry Langford, Mary-Anne Lowe, Bede S. Mickan, Valerie S. Miller, Oliver W. Moore, Falko Mathes, Deirdre Gleeson, Matthias Leopold
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Effect of aridity and dune type on rhizosphere soil bacterial communities of Caragana microphylla in desert regions of northern China
    Jiangli Gao, Yang Luo, Yali Wei, Yaolong Huang, Hua Zhang, Wenliang He, Hongmei Sheng, Lizhe An, Marie-Joelle Virolle
    PLOS ONE.2019; 14(10): e0224195.     CrossRef
  • Temporal variation of Q 10 values in response to changes in soil physiochemical properties caused by fairy rings
    Chao Yang, Yingjun Zhang, Yuping Rong, Yixian Bei, Yuqi Wei, Nan Liu
    European Journal of Soil Biology.2018; 86: 42.     CrossRef
  • Soil productivity and structure of bacterial and fungal communities in unfertilized arable soil
    Boxi Wang, Yoichi Adachi, Shuichi Sugiyama, Lorenzo Brusetti
    PLOS ONE.2018; 13(9): e0204085.     CrossRef
  • Effect of reclamation of abandoned salinized farmland on soil bacterial communities in arid northwest China
    Zhibo Cheng, Yun Chen, Fenghua Zhang
    Science of The Total Environment.2018; 630: 799.     CrossRef
  • Composition and diversity of cyanobacteria-associated and free-living bacterial communities during cyanobacterial blooms
    Leighannah N. Akins, Paul Ayayee, Laura G. Leff
    Annals of Microbiology.2018; 68(8): 493.     CrossRef
  • Modeling soil acidification in typical Chinese cropping systems
    Qichao Zhu, Xuejun Liu, Tianxiang Hao, Mufan Zeng, Jianbo Shen, Fusuo Zhang, Wim De Vries
    Science of The Total Environment.2018; 613-614: 1339.     CrossRef
  • Macro and Microelements Drive Diversity and Composition of Prokaryotic and Fungal Communities in Hypersaline Sediments and Saline–Alkaline Soils
    Kaihui Liu, Xiaowei Ding, Xiaofei Tang, Jianjun Wang, Wenjun Li, Qingyun Yan, Zhenghua Liu
    Frontiers in Microbiology.2018;[Epub]     CrossRef
  • Shift of soil bacterial community and decrease of metals bioavailability after immobilization of a multi-metal contaminated acidic soil by inorganic-organic mixed amendments: A field study
    Li-min Huang, Guang-wei Yu, Fu-zhen Zou, Xin-xian Long, Qi-tang Wu
    Applied Soil Ecology.2018; 130: 104.     CrossRef
  • Wood Ash Induced pH Changes Strongly Affect Soil Bacterial Numbers and Community Composition
    Toke Bang-Andreasen, Jeppe T. Nielsen, Jana Voriskova, Janine Heise, Regin Rønn, Rasmus Kjøller, Hans C. B. Hansen, Carsten S. Jacobsen
    Frontiers in Microbiology.2017;[Epub]     CrossRef
  • Comparisons of Soil Properties, Enzyme Activities and Microbial Communities in Heavy Metal Contaminated Bulk and Rhizosphere Soils of Robinia pseudoacacia L. in the Northern Foot of Qinling Mountain
    Yurong Yang, Miao Dong, Yaping Cao, Jinlong Wang, Ming Tang, Yihui Ban
    Forests.2017; 8(11): 430.     CrossRef
Research Support, Non-U.S. Gov'ts
Bacillus megaterium Strain XTBG34 Promotes Plant Growth by Producing 2-Pentylfuran
Changsong Zou , Zhifang Li , Diqiu Yu
J. Microbiol. 2010;48(4):460-466.   Published online August 20, 2010
DOI: https://doi.org/10.1007/s12275-010-0068-z
  • 259 View
  • 0 Download
  • 128 Crossref
AbstractAbstract PDF
Several chemical changes in soil are associated with plant growth-promoting rhizobacteria. An endosporeforming bacterium, strain XTBG34, was isolated from a Xishuangbanna Tropical Botanical Garden soil sample and identified as Bacillus megaterium. The strain’s volatiles had remarkable plant growth promotion activity in Arabidopsis thaliana plants; after 15 days treatment, the fresh weight of plants inoculated with XTBG34 was almost 2-fold compared with those inoculated with DH5α. Head space volatile compounds produced by XTBG34, trapped with headspace solid phase microextraction and identified by gas chromatography–mass spectrometry, included aldehydes, alkanes, ketones and aroma components. Of the 11 compounds assayed for plant growth promotion activity in divided Petri plates, only 2-pentylfuran increased plant growth. We have therefore identified a new plant growth promotion volatile of B. megaterium XTBG34, which deserves further study in the mechanisms of interaction between plant growth-promoting rhizobacteria and plants.

Citations

Citations to this article as recorded by  
  • Exploring Synergistic Effects of Pantoea agglomerans BCH-1 and Bacillus pseudomycoides BCH-3 To Enhance Maize Adaptations Under Drought Condition
    Anam Tariq, Mahwish Salman, Muhammad Arslan Ashraf, Shazia Anwer Bukhari, Ghulam Mustafa
    Journal of Soil Science and Plant Nutrition.2025; 25(2): 4747.     CrossRef
  • Effective control of southern blight and root rot of Aconitum carmichaelii Debeaux by endophytic Bacillus velezensis YN-2-6S
    Qian Wang, Yujie Qiu, Siyu Wang, Yumei Gou, Hongji Hou, Tianwei Su, Lan Zou, Jing Huang
    Biological Control.2025; 201: 105690.     CrossRef
  • Plant Growth-Promoting Rhizobacteria Enhance Sweet Cherry Root System Development Through the Production of Volatile Organic Compounds
    Nan Zeng, Rutao Gai, Dandan Wang, Jiahe Pang, Dingcun Zhang, Junliang Ge, Xinyue Bi, Zhiyong Zhang, Ning Zhang, Bingxue Li
    Foods.2025; 14(13): 2369.     CrossRef
  • Volatile organic compounds from Bacillus velezensis FZB42 remodel Arabidopsis root architecture by an auxin-dependent mechanism
    Ailing Ye, Liang Yue, Andéole Niyongabo Turatsinze, Xiaofan Xie, Zongyu Zhang, Gaofeng Chen, Lingling Wu, Qin Zhou, Yun Wang, Meilan Zhang, Yubao Zhang, Jiecai Zhao, Ruoyu Wang
    Plant Cell Reports.2025;[Epub]     CrossRef
  • Bacillus vallismortis LRB-5: a promising biocontrol agent for mitigating apple replant disease through pathogen suppression and growth promotion
    Yanan Duan, Ziqing Ma, Yiwei Jia, Hengtong Xing, Zhiquan Mao, Ke Mao, Zhijun Zhang, Chao Li, Fengwang Ma
    Stress Biology.2025;[Epub]     CrossRef
  • Profiling the bioactive metabolites of endophytic Bacillus involved in antagonistic interaction with the Fusarium pathogen of cowpea
    S.J. Sreeja, M. Siva, E. Santhoshinii, K. Saravanakumari, K.N. Anith
    Physiological and Molecular Plant Pathology.2025; 140: 102879.     CrossRef
  • Allelochemicals degradation and multifarious plant growth promoting potential of two Bacillus spp.: Insights into genomic potential and abiotic stress alleviation
    Sajid Iqbal, Farida Begum, Clarisse Manishimwe, Ali A. Rabaan, Amal A. Sabour, Maha A. Alshiekheid, Peter Shaw
    Chemosphere.2025; 373: 144191.     CrossRef
  • Application of fungal volatile organic compounds for enhancing plant growth and controlling plant pathogens
    Elsherbiny A. Elsherbiny, Sabrien A. Omar, Joan W. Bennett
    Fungal Biology.2025; 129(5): 101606.     CrossRef
  • Bacillus Strains as Increased Soil Fertility and Biomass Yield Tactics in a Reclaimed Tidal Flat, Saemangeum, Korea
    Jihwi Jang
    Current Microbiology.2025;[Epub]     CrossRef
  • Simultaneous Boosting of Plant Growth and Immunity by Bacillus volatiles Through GLK‐Mediated Enhancement of Chloroplast Functions
    Ronghui Li, Li Sun, Chenming Gao, Junxiang Hou, He Feng, Qiuyuan Zhao, Mingde Wu, Jing Zhang, Guangsheng Zhou, Kenichi Tsuda, Yangdou Wei, Guoqing Li, Long Yang
    Plant, Cell & Environment.2025; 48(11): 8305.     CrossRef
  • Unraveling Qu-aroma variation between inner and outer layers of medium-temperature Daqu: A multi-omics and sensory approach
    Sheng-Bing Yang, Zhen-Ming Lu, Han-Jun Shen, Jun-Jie Fu, Yang Yang, Xiao-Juan Zhang, Li-Juan Chai, Song-Tao Wang, Su-Yi Zhang, Cai-Hong Shen, Jin-Song Shi, Zheng-Hong Xu
    International Journal of Food Microbiology.2025; 442: 111392.     CrossRef
  • Inducible Volatile Chemical Signalling Drives Antifungal Activity of Trichoderma hamatum GD12 During Confrontation With the Pathogen Sclerotinia sclerotiorum
    Gareth A. Thomas, József Vuts, David M. Withall, John C. Caulfield, John Sidda, Murray R. Grant, Christopher R. Thornton, Michael A. Birkett
    Environmental Microbiology Reports.2025;[Epub]     CrossRef
  • Ecotoxicological assessment of biomass-derived furan platform chemicals using aquatic and terrestrial bioassays
    Stella Parmaki, Marlen I. Vasquez, Maria Patsalou, Rafael F. A. Gomes, Svilen P. Simeonov, Carlos A. M. Afonso, Michalis Koutinas
    Environmental Science: Processes & Impacts.2024; 26(4): 686.     CrossRef
  • Effect of biopreparations on growth parameters of Sorghum sudanense (Piper) Stapf
    Lyubov' Vladimirovna Suhareva
    Agrarian Bulletin of the.2024; 24(01): 12.     CrossRef
  • Biocontrol Ability of Strain Bacillus amyloliquefaciens SQ-2 against Table Grape Rot Caused by Aspergillus tubingensis
    Suran Li, Shuangshuang Dai, Lei Huang, Yumeng Cui, Ming Ying
    Journal of Agricultural and Food Chemistry.2024; 72(44): 24374.     CrossRef
  • The Complex GH32 Enzyme Orchestra from Priestia megaterium Holds the Key to Better Discriminate Sucrose-6-phosphate Hydrolases from Other β-Fructofuranosidases in Bacteria
    Erin Dobrange, Jaime Ricardo Porras-Domínguez, Wim Van den Ende
    Journal of Agricultural and Food Chemistry.2024; 72(2): 1302.     CrossRef
  • Bacterial Volatile Organic Compounds as a Strategy to Increase Drought Tolerance in Maize (Zea mays L.): Influence on Plant Biochemistry
    Tiago Lopes, Pedro Costa, Paulo Cardoso, Etelvina Figueira
    Plants.2024; 13(17): 2456.     CrossRef
  • Streptomyces strains inhibit the growth of Fusarium kuroshium and Fusarium solani and promote the growth of Arabidopsis thaliana
    María Fernanda Ruiz-Cisneros, José de Jesús Ornelas-Paz, Daniel Alonso Pérez-Corral, Guadalupe Isela Olivas-Orozco, David Ignacio Berlanga-Reyes, Octavio Jhonathan Cambero-Campos, Mario Orlando Estrada-Virgen, Salvador Ordaz-Silva, Miguel Ángel Salas-Mari
    Biocontrol Science and Technology.2024; 34(5): 469.     CrossRef
  • Impact of Drought Stress on Plant Growth and Its Management Using Plant Growth Promoting Rhizobacteria
    Kabyashree Buragohain, Dulumoni Tamuly, Sukanya Sonowal, Ratul Nath
    Indian Journal of Microbiology.2024; 64(2): 287.     CrossRef
  • Volatile organic compounds emitted by Trichoderma: Small molecules with biotechnological potential
    Juan Francisco Jiménez-Bremont, Enrique González-Pérez, María Azucena Ortega-Amaro, Susana Madrigal-Ortiz, Arianna Duque-Ortiz, Artemio Mendoza-Mendoza
    Scientia Horticulturae.2024; 325: 112656.     CrossRef
  • Important soil microbiota's effects on plants and soils: a comprehensive 30-year systematic literature review
    Xueling Wang, Yongkuan Chi, Shuzhen Song
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • 2-heptanone and 2,3-butanediol from endophytic Bacillus subtilis GEB-1 against root-knot nematode, Meloidogyne enterolobii : a computational and experimental approach
    Ganeshan Shandeep, Shanthi Annaiyan, Jayakanthan Mannu, Prabhu Somasundaram, Angappan Kathithachalam, Haripriya Shanmugam, Settu Vijay
    Biocontrol Science and Technology.2024; 34(7): 579.     CrossRef
  • Volatiles emitted by Pseudomonas aurantiaca ST-TJ4 trigger systemic plant resistance to Verticillium dahliae
    Hang Ni, Wei-Liang Kong, Qiao-Qiao Zhang, Xiao-Qin Wu
    Microbiological Research.2024; 287: 127834.     CrossRef
  • Drought-tolerant plant growth-promoting rhizobacteria alleviate drought stress and enhance soil health for sustainable agriculture: A comprehensive review
    Mohamed T. El-Saadony, Ahmed M. Saad, Dina Mostafa Mohammed, Mohamed A. Fahmy, Ibrahim Eid Elesawi, Ahmed Ezzat Ahmed, Uthman Balgith Algopishi, Ahmed S. Elrys, El-Sayed M. Desoky, Walid F.A. Mosa, Taia A. Abd El-Mageed, Fardous I. Alhashmi, Betty T. Math
    Plant Stress.2024; 14: 100632.     CrossRef
  • Ameliorative effects of microbial fertiliser on yield and quality parameters of curly lettuce and cucumber with fertiliser saving
    Halil Demir, H. Kayhan Yalçi, Ayşe Katgici
    Folia Horticulturae.2023; 35(1): 91.     CrossRef
  • Molecular characteristics of some Botrytis isolates and antagonistic activity of Bacillus subtilis and its bacteriocin on tomato fruit
    Firas Ali Ahmed, Ali M. Salman, Basil H. Kandouh
    Archives of Phytopathology and Plant Protection.2023; 56(16): 1267.     CrossRef
  • Surmounting the off-flavor challenge in plant-based foods
    William Leonard, Pangzhen Zhang, Danyang Ying, Zhongxiang Fang
    Critical Reviews in Food Science and Nutrition.2023; 63(30): 10585.     CrossRef
  • Advances in microbial analysis: Based on volatile organic compounds of microorganisms in food
    Minxia Fan, Tojofaniry Fabien Rakotondrabe, Guilin Chen, Mingquan Guo
    Food Chemistry.2023; 418: 135950.     CrossRef
  • Variation with In Vitro Analysis of Volatile Profiles among Aspergillus flavus Strains from Louisiana
    Geromy G. Moore, Steven W. Lloyd
    Separations.2023; 10(3): 157.     CrossRef
  • Characterization and comparison of the plant growth promoting rhizobacteria associated with Basmati-129 & Ranbir Basmati rice indigenous to Jammu & Kashmir, India
    Tabia Andrabi, Nitika Sharma, Sheetal Ambardar, R.K. Salgotra, Jyoti Vakhlu
    Microsphere.2023; 2(2): 215.     CrossRef
  • Biofertilizers Improve the Plant Growth, Yield, and Mineral Concentration of Lettuce and Broccoli
    Halil Demir, İlker Sönmez, Ufuk Uçan, İsmail Hakkı Akgün
    Agronomy.2023; 13(8): 2031.     CrossRef
  • Investigating the changes of texture, physicochemical properties, microbial diversity, and volatile compounds of quinoa fresh noodles during storage time
    Zinan Wang, Shan Liang, Min Zhang
    Cereal Chemistry.2023; 100(5): 1132.     CrossRef
  • Bacillus species: factories of plant protective volatile organic compounds
    Eirini G Poulaki, Sotiris E Tjamos
    Journal of Applied Microbiology.2023;[Epub]     CrossRef
  • Bacterial volatile organic compounds (VOCs) promote growth and induce metabolic changes in rice
    Octávio Augusto Costa Almeida, Natália Oliveira de Araujo, Aline Tieppo Nogueira Mulato, Gabriela Felix Persinoti, Maurício Luís Sforça, Maria Juliana Calderan-Rodrigues, Juliana Velasco de Castro Oliveira
    Frontiers in Plant Science.2023;[Epub]     CrossRef
  • 2-Pentylfuran: an aggregation attractant for wireworms
    Diana la Forgia, Clément Martin, Ted C. J. Turlings, François Verheggen
    Arthropod-Plant Interactions.2023; 17(4): 465.     CrossRef
  • Bacterial volatiles as PGPRs: Inducing plant defense mechanisms during stress periods
    Rajat Laller, Prem Kumar Khosla, Nidhi Negi, Harish Avinash, Kusum, Nitika Thakur, Shashank Kashyap, Sudheesh K. Shukla, Iqtidar Hussain
    South African Journal of Botany.2023; 159: 131.     CrossRef
  • Microbial Allies in Agriculture: Harnessing Plant Growth-Promoting Microorganisms as Guardians against Biotic and Abiotic Stresses
    Islam I. Teiba, Emad H. El-Bilawy, Nabil I. Elsheery, Anshu Rastogi
    Horticulturae.2023; 10(1): 12.     CrossRef
  • Priestia sp. LWS1 Is a Selenium-Resistant Plant Growth-Promoting Bacterium That Can Enhance Plant Growth and Selenium Accumulation in Oryza sativa L.
    Xiao-Rui Lin, Han-Bing Chen, Yi-Xi Li, Zhi-Hua Zhou, Jia-Bing Li, Yao-Qiang Wang, Hong Zhang, Yong Zhang, Yong-He Han, Shan-Shan Wang
    Agronomy.2022; 12(6): 1301.     CrossRef
  • Microbial Volatile Organic Compounds: An Alternative for Chemical Fertilizers in Sustainable Agriculture Development
    Murugesan Chandrasekaran, Manivannan Paramasivan, Jesudass Joseph Sahayarayan
    Microorganisms.2022; 11(1): 42.     CrossRef
  • Bacillus cereusMH778713 elicits tomato plant protection againstFusarium oxysporum
    Verónica Ramírez, Javier Martínez, María del Rocio Bustillos‐Cristales, Dolores Catañeda‐Antonio, José‐Antonio Munive, Antonino Baez
    Journal of Applied Microbiology.2022; 132(1): 470.     CrossRef
  • Isolation and identification of Bacillus vallismortis HSB-2 and its biocontrol potential against apple replant disease
    Yanan Duan, Ran Chen, Rong Zhang, Weitao Jiang, Xuesen Chen, Chengmiao Yin, Zhiquan Mao
    Biological Control.2022; 170: 104921.     CrossRef
  • Rhizospheric volatilome in modulating induced systemic resistance against biotic stress: A new paradigm for future food security
    Sugitha Thankappan, Shobana Narayanasamy, A.P. Sridharan, A.K. Binodh, A. Nirmala Kumari, P. Parasuraman, Sivakumar Uthandi
    Physiological and Molecular Plant Pathology.2022; 120: 101852.     CrossRef
  • Plant growth-promoting and non-promoting rhizobacteria from avocado trees differentially emit volatiles that influence growth of Arabidopsis thaliana
    Roberto Gamboa-Becerra, Damaris Desgarennes, Jorge Molina-Torres, Enrique Ramírez-Chávez, Ana L. Kiel-Martínez, Gloria Carrión, Randy Ortiz-Castro
    Protoplasma.2022; 259(4): 835.     CrossRef
  • Mitigation of CaCO3 Influence on Ipomoea batatas Plants Using Bacillus megaterium DSM 2894
    Ahmed A. M. Awad, Alshaymaa I. Ahmed, Alaa H. Abd Elazem, Atef A. A. Sweed
    Agronomy.2022; 12(7): 1571.     CrossRef
  • Biocontrol properties from phyllospheric bacteria isolated from Solanum lycopersicum and Lactuca sativa and genome mining of antimicrobial gene clusters
    Claudia Y. Muñoz, Lu Zhou, Yunhai Yi, Oscar P. Kuipers
    BMC Genomics.2022;[Epub]     CrossRef
  • Unraveling Microbial Volatile Elicitors Using a Transparent Methodology for Induction of Systemic Resistance and Regulation of Antioxidant Genes at Expression Levels in Chili against Bacterial Wilt Disease
    Abhijeet Shankar Kashyap, Nazia Manzar, Suresh M. Nebapure, Mahendra Vikram Singh Rajawat, Man Mohan Deo, Jyoti Prakash Singh, Amit Kumar Kesharwani, Ravinder Pal Singh, S. C. Dubey, Dinesh Singh
    Antioxidants.2022; 11(2): 404.     CrossRef
  • Volatile organic compounds in the interaction between plants and beneficial microorganisms
    Assunta Russo, Susanna Pollastri, Michelina Ruocco, Maurilia M. Monti, Francesco Loreto
    Journal of Plant Interactions.2022; 17(1): 840.     CrossRef
  • Pangenome analyses of Bacillus pumilus, Bacillus safensis, and Priestia megaterium exploring the plant-associated features of bacilli strains isolated from canola
    Evelise Bach, Caroline Pinto Rangel, Igor Daniel Alves Ribeiro, Luciane Maria Pereira Passaglia
    Molecular Genetics and Genomics.2022; 297(4): 1063.     CrossRef
  • Effect of Plant Preservative MixtureTM on Endophytic Bacteria Eradication from In Vitro-Grown Apple Shoots
    Natalya V. Romadanova, Arman B. Tolegen, Svetlana V. Kushnarenko, Elena V. Zholdybayeva, Jean Carlos Bettoni
    Plants.2022; 11(19): 2624.     CrossRef
  • Plant Growth-Promoting Rhizobacteria Eliminate the Effect of Drought Stress in Plants: A Review
    Hafiz Muhammad Ahmad, Sajid Fiaz, Sumaira Hafeez, Sadaf Zahra, Adnan Noor Shah, Bushra Gul, Omar Aziz, Mahmood-Ur-Rahman, Ali Fakhar, Mazhar Rafique, Yinglong Chen, Seung Hwan Yang, Xiukang Wang
    Frontiers in Plant Science.2022;[Epub]     CrossRef
  • Identification of Volatile Organic Compounds Produced by Xenorhabdus indica Strain AB and Investigation of Their Antifungal Activities
    Baiome Abdelmaguid Baiome, Xianfeng Ye, Zhongyuan Yuan, Yahya Z. A. Gaafar, Sherif Melak, Hui Cao, Martha Vives
    Applied and Environmental Microbiology.2022;[Epub]     CrossRef
  • Plant Growth-Promoting Rhizobacteria as a Green Alternative for Sustainable Agriculture
    Hema Chandran, Mukesh Meena, Prashant Swapnil
    Sustainability.2021; 13(19): 10986.     CrossRef
  • Dependence of thermal desorption method for profiling volatile organic compound (VOC) emissions from soil
    Robert W. Brown, Jan Peter Mayser, Caroline Widdowson, Dave R. Chadwick, Davey L. Jones
    Soil Biology and Biochemistry.2021; 160: 108313.     CrossRef
  • Delineation of mechanistic approaches employed by plant growth promoting microorganisms for improving drought stress tolerance in plants
    Shahid Ali, Naeem Khan
    Microbiological Research.2021; 249: 126771.     CrossRef
  • Nematicidal Volatiles from Bacillus atrophaeus GBSC56 Promote Growth and Stimulate Induced Systemic Resistance in Tomato against Meloidogyne incognita
    Muhammad Ayaz, Qurban Ali, Ayaz Farzand, Abdur Rashid Khan, Hongli Ling, Xuewen Gao
    International Journal of Molecular Sciences.2021; 22(9): 5049.     CrossRef
  • 2‐Pentylfuran: a novel repellent of Drosophila suzukii
    Dong H Cha, Gwang H Roh, Stephen P Hesler, Anna Wallingford, Dara G Stockton, Shinyoung K Park, Gregory M Loeb
    Pest Management Science.2021; 77(4): 1757.     CrossRef
  • Volatile organic compounds produced by Pseudomonas pseudoalcaligenes alleviated drought stress by modulating defense system in maize (Zea mays L.)
    Humaira Yasmin, Urooj Rashid, Muhammad Nadeem Hassan, Asia Nosheen, Rabia Naz, Noshin Ilyas, Muhammad Sajjad, Ammar Azmat, Mohammed Nasser Alyemeni
    Physiologia Plantarum.2021; 172(2): 896.     CrossRef
  • Molecular detection of putative pathogens to determine any role in a causal relationship with abnormal vertical growth syndrome of macadamia
    Mohamed C. M. Zakeel, Olufemi A. Akinsanmi, Andrew D. W. Geering
    European Journal of Plant Pathology.2021; 161(2): 427.     CrossRef
  • Bacillus megaterium strain WW1211 promotes plant growth and lateral root initiation via regulation of auxin biosynthesis and redistribution
    Shengwang Wang, Xiaofan Na, Lei Yang, Cuifang Liang, Li He, Jie Jin, Ziyu Liu, Juan Qin, Junjie Li, Xiaomin Wang, Yurong Bi
    Plant and Soil.2021; 466(1-2): 491.     CrossRef
  • Effect of Volatile Compounds Produced by Selected Bacterial Endophytes in Promoting Plant Growth
    Maheshwari Asha, Mmbaga Margaret, Bhusal Bandana, Ondzighi-Assoume Christine
    HortScience.2021; 56(10): 1175.     CrossRef
  • Volatile compounds from beneficial rhizobacteria Bacillus spp. promote periodic lateral root development in Arabidopsis
    Yucong Li, Jiahui Shao, Yuanming Xie, Letian Jia, Yansong Fu, Zhihui Xu, Nan Zhang, Haichao Feng, Weibing Xun, Yunpeng Liu, Qirong Shen, Wei Xuan, Ruifu Zhang
    Plant, Cell & Environment.2021; 44(5): 1663.     CrossRef
  • A sustainable way to reuse Cr(VI) into an efficient biological nanometer electrocatalyst by Bacillus megaterium
    Shunling Li, Xinwei Wen, Chang Liu, Yixiu Dai, Xiaoling Shi, Lei Li, Shuang Tan, Qing Qu, Rui Huang
    Journal of Hazardous Materials.2021; 409: 124942.     CrossRef
  • Establishment of Codonopsis pilosula (Franch.) Nannf. transformed roots, influence of the culture conditions on root growth and production of essential oil
    Joanna Makowczyńska, Danuta Kalemba, Ewa Skała
    Industrial Crops and Products.2021; 165: 113446.     CrossRef
  • The application of Bacillus Megaterium alters soil microbial community composition, bioavailability of soil phosphorus and potassium, and cucumber growth in the plastic shed system of North China
    Yingnan Zhao, Xiaoxi Mao, Minshuo Zhang, Wei Yang, Hong J. Di, Li Ma, Wenju Liu, Bowen Li
    Agriculture, Ecosystems & Environment.2021; 307: 107236.     CrossRef
  • The “beauty in the beast”—the multiple uses of Priestia megaterium in biotechnology
    Rebekka Biedendieck, Tobias Knuuti, Simon J. Moore, Dieter Jahn
    Applied Microbiology and Biotechnology.2021; 105(14-15): 5719.     CrossRef
  • The hidden effects of agrochemicals on plant metabolism and root-associated microorganisms
    Stefano Cesco, Luigi Lucini, Begona Miras-Moreno, Luigimaria Borruso, Tanja Mimmo, Youry Pii, Edoardo Puglisi, Giulia Spini, Eren Taskin, Raphael Tiziani, Maria Simona Zangrillo, Marco Trevisan
    Plant Science.2021; 311: 111012.     CrossRef
  • Current advances in plant-microbe communication via volatile organic compounds as an innovative strategy to improve plant growth
    Paola Fincheira, Andrés Quiroz, Gonzalo Tortella, María Cristina Diez, Olga Rubilar
    Microbiological Research.2021; 247: 126726.     CrossRef
  • Unearthing the Plant Growth-Promoting Traits of Bacillus megaterium RmBm31, an Endophytic Bacterium Isolated From Root Nodules of Retama monosperma
    Malika Affaf Dahmani, Antoine Desrut, Bouziane Moumen, Julien Verdon, Lamia Mermouri, Mourad Kacem, Pierre Coutos-Thévenot, Meriem Kaid-Harche, Thierry Bergès, Cécile Vriet
    Frontiers in Plant Science.2020;[Epub]     CrossRef
  • Harnessing microbial volatiles to replace pesticides and fertilizers
    Gareth Thomas, David Withall, Michael Birkett
    Microbial Biotechnology.2020; 13(5): 1366.     CrossRef
  • Bacillus species as potential biocontrol agents against citrus diseases
    Kai Chen, Zhonghuan Tian, Hua He, Chao-an Long, Fatang Jiang
    Biological Control.2020; 151: 104419.     CrossRef
  • Volatile compounds mediated effects of Stenotrophomonas maltophilia strain UN1512 in plant growth promotion and its potential for the biocontrol of Colletotrichum nymphaeae
    Zahra Alijani, Jahanshir Amini, Morahem Ashengroph, Bahman Bahramnejad
    Physiological and Molecular Plant Pathology.2020; 112: 101555.     CrossRef
  • Mechanisms of Soybean Host-Plant Resistance Against Megacopta cribraria (Hemiptera: Plataspidae)
    S Lahiri, D D Reisig, Lisa L Dean, F P F Reay-Jones, J K Greene, T E Carter, R Mian, B D Fallen, Steven Naranjo
    Environmental Entomology.2020; 49(4): 876.     CrossRef
  • Stereoisomers of Nonvolatile Acetylbutanediol Metabolites Produced by Bacillus velezensis WRN031 Improved Root Elongation of Maize and Rice
    Anqi Wang, Juan Hua, Yangyang Wang, Guishan Zhang, Shihong Luo
    Journal of Agricultural and Food Chemistry.2020; 68(23): 6308.     CrossRef
  • Growth promotion and root development of Nicotiana tabacum L. by plant growth promoting fungi (PGPF)
    Eunhye Hong, Jinok Lee, Sujung Kim, Hualin Nie, Young-Nam Kim, Jiseong Kim, Sunhyung Kim
    Journal of Plant Biotechnology.2020; 47(4): 337.     CrossRef
  • Role of Volatiles from the Endophytic Fungus Trichoderma asperelloides PSU-P1 in Biocontrol Potential and in Promoting the Plant Growth of Arabidopsis thaliana
    Nongnat Phoka, Nakarin Suwannarach, Saisamorn Lumyong, Shin-ichi Ito, Kenji Matsui, Siwaret Arikit, Anurag Sunpapao
    Journal of Fungi.2020; 6(4): 341.     CrossRef
  • Induction of Salt Tolerance in Arabidopsis thaliana by Volatiles From Bacillus amyloliquefaciens FZB42 via the Jasmonic Acid Signaling Pathway
    Shaofang Liu, Yuan Tian, Mei Jia, Xiang Lu, Liang Yue, Xia Zhao, Weigen Jin, Yun Wang, Yubao Zhang, Zhongkui Xie, Ruoyu Wang
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Antifungal Effects of Volatiles Produced by Bacillus subtilis Against Alternaria solani in Potato
    Dai Zhang, Shuiqing Yu, Yiqing Yang, Jinglin Zhang, Dongmei Zhao, Yang Pan, Shasha Fan, Zhihui Yang, Jiehua Zhu
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Exposure in vitro to an Environmentally Isolated Strain TC09 of Cladosporium sphaerospermum Triggers Plant Growth Promotion, Early Flowering, and Fruit Yield Increase
    Zhijian T. Li, Wojciech J. Janisiewicz, Zongrang Liu, Ann M. Callahan, Breyn E. Evans, Wayne M. Jurick, Chris Dardick
    Frontiers in Plant Science.2019;[Epub]     CrossRef
  • Antifungal and plant growth promotion activity of volatile organic compounds produced by Bacillus amyloliquefaciens
    Yuncheng Wu, Jinyan Zhou, Chengguo Li, Yan Ma
    MicrobiologyOpen.2019;[Epub]     CrossRef
  • Physiological response of Lactuca sativa exposed to 2-nonanone emitted by Bacillus sp. BCT9
    Paola Fincheira, Andrés Quiroz
    Microbiological Research.2019; 219: 49.     CrossRef
  • Smells from the desert: Microbial volatiles that affect plant growth and development of native and non‐native plant species
    David A. Camarena‐Pozos, Víctor M. Flores‐Núñez, Mercedes G. López, José López‐Bucio, Laila P. Partida‐Martínez
    Plant, Cell & Environment.2019; 42(4): 1368.     CrossRef
  • Volatile compounds other than CO2 emitted by different microorganisms promote distinct posttranscriptionally regulated responses in plants
    Pablo García‐Gómez, Goizeder Almagro, Ángela María Sánchez‐López, Abdellatif Bahaji, Kinia Ameztoy, Adriana Ricarte‐Bermejo, Marouane Baslam, María Carmen Antolín, Amadeo Urdiain, María Dolores López‐Belchi, Pedro López‐Gómez, José Fernando Morán, Julián
    Plant, Cell & Environment.2019; 42(5): 1729.     CrossRef
  • Biological effect of VOCs produced during Pseudomonas syringae pv. actinidiae infection of kiwifruit plant
    A. Cellini, G. Buriani, I. Donati, L. Rocchi, M.T. Rodriguez-Estrada, S. Savioli, S.M. Cristescu, F. Spinelli
    Acta Horticulturae.2019; (1243): 7.     CrossRef
  • Ochrobactrum ciceri mediated induction of defence genes and antifungal metabolites enhance the biocontrol efficacy for the management of Botrytis leaf blight of Lilium under protected conditions
    Rajendran Priyanka, Sevugapperumal Nakkeeran
    Journal of Plant Pathology.2019; 101(2): 323.     CrossRef
  • Metagenomic Analysis of the Bacterial and Fungal Community Associated to the Rhizosphere of Tabebuia chrysantha and T. billbergii
    Luis X. Llacsa, Rosa L. Solis-Castro, Eric Mialhe, Ramón García-Seminario
    Current Microbiology.2019; 76(9): 1073.     CrossRef
  • Influence of an Arbuscular Mycorrhizal Fungus and Phosphate-Solubilizing Bacterium Inoculation at Stem Cutting Stage on P Uptake and Growth of Impatiens walleriana Plants in an Unsterile Field Soil
    Muthukumar Thangavelu, Prabhu Arumugam
    Journal of Horticultural Research.2019; 27(2): 11.     CrossRef
  • Volatile organic compounds emitted by Bacillus sp. JC03 promote plant growth through the action of auxin and strigolactone
    Chun-Hao Jiang, Yue-Sheng Xie, Kai Zhu, Ning Wang, Zi-Jie Li, Gan-Jun Yu, Jian-Hua Guo
    Plant Growth Regulation.2019; 87(2): 317.     CrossRef
  • Antagonist effects of strains of Bacillus spp. against Rhizoctonia solani for their protection against several plant diseases: Alternatives to chemical pesticides
    Aqleem Abbas, Shahid Ullah Khan, Wasim Ullah Khan, Tawfik A. Saleh, Muhammad Hafeez Ullah Khan, Sana Ullah, Ahmad Ali, Muhammad Ikram
    Comptes Rendus. Biologies.2019; 342(5-6): 124.     CrossRef
  • The Rhizosphere Microbiome And Its Beneficial Effects On Plants – Current Knowledge And Perspectives
    Małgorzata Woźniak, Anna Gałązka
    Postępy Mikrobiologii - Advancements of Microbiology.2019; 58(1): 59.     CrossRef
  • Microbial volatiles as plant growth inducers
    Paola Fincheira, Andrés Quiroz
    Microbiological Research.2018; 208: 63.     CrossRef
  • Antagonistic activities of volatiles produced by two Bacillus strains against Monilinia fructicola in peach fruit
    Chang Liu, Xiaohui Yin, Qingguo Wang, Yong Peng, Yurong Ma, Pei Liu, Jingying Shi
    Journal of the Science of Food and Agriculture.2018; 98(15): 5756.     CrossRef
  • From Acetoin to (Z)-3-Hexen-1-ol: The Diversity of Volatile Organic Compounds that Induce Plant Responses
    Tristan M. Cofer, Irmgard Seidl-Adams, James H. Tumlinson
    Journal of Agricultural and Food Chemistry.2018; 66(43): 11197.     CrossRef
  • The Arabidopsis-Trichoderma interaction reveals that the fungal growth medium is an important factor in plant growth induction
    Enrique González-Pérez, María Azucena Ortega-Amaro, Fatima Berenice Salazar-Badillo, Elihú Bautista, David Douterlungne, Juan Francisco Jiménez-Bremont
    Scientific Reports.2018;[Epub]     CrossRef
  • Physiological and proteomic analysis of plant growth enhancement by the rhizobacteria Bacillus sp. JS
    Ji Seong Kim, Jeong Eun Lee, Hualin Nie, Yong Jae Lee, Sun Tae Kim, Sun-Hyung Kim
    Genes & Genomics.2018; 40(2): 129.     CrossRef
  • Fungi Indirectly Affect Plant Root Architecture by Modulating Soil Volatile Organic Compounds
    Denis Schenkel, Jose G. Maciá-Vicente, Alexander Bissell, Richard Splivallo
    Frontiers in Microbiology.2018;[Epub]     CrossRef
  • Physiological changes and growth promotion induced in poplar seedlings by the plant growth-promoting rhizobacteria Bacillus subtilis JS
    J. H. Jang, S. -H. Kim, I. Khaine, M. J. Kwak, H. K. Lee, T. Y. Lee, W. Y. Lee, S. Y. Woo
    Photosynthetica.2018; 56(4): 1188.     CrossRef
  • Antibacterial effects of volatiles produced by Bacillus strain D13 against Xanthomonas oryzae pv. oryzae
    Shanshan Xie, Haoyu Zang, Huijun Wu, Faheem Uddin Rajer, Xuewen Gao
    Molecular Plant Pathology.2018; 19(1): 49.     CrossRef
  • Volatiles produced by Bacillus mojavensis RRC101 act as plant growth modulators and are strongly culture-dependent
    M. Rath, T.R. Mitchell, S.E. Gold
    Microbiological Research.2018; 208: 76.     CrossRef
  • Bacillus volatiles adversely affect the physiology and ultra-structure of Ralstonia solanacearum and induce systemic resistance in tobacco against bacterial wilt
    Hafiz Abdul Samad Tahir, Qin Gu, Huijun Wu, Yuedi Niu, Rong Huo, Xuewen Gao
    Scientific Reports.2017;[Epub]     CrossRef
  • Isolation and Identification of Bacterial Endophytes from Grasses along the Oregon Coast
    James E. Dombrowski, Vicky G. Hollenbeck, Ruth C. Martin
    American Journal of Plant Sciences.2017; 08(03): 574.     CrossRef
  • Strain-specific variation in plant growth promoting volatile organic compounds production by five different Pseudomonas spp. as confirmed by response of Vigna radiata seedlings
    P. Jishma, N. Hussain, R. Chellappan, R. Rajendran, J. Mathew, E.K. Radhakrishnan
    Journal of Applied Microbiology.2017; 123(1): 204.     CrossRef
  • Effects of discrete bioactive microbial volatiles on plants and fungi
    Birgit Piechulla, Marie Chantal Lemfack, Marco Kai
    Plant, Cell & Environment.2017; 40(10): 2042.     CrossRef
  • Plant Growth Promotion by Volatile Organic Compounds Produced by Bacillus subtilis SYST2
    Hafiz A. S. Tahir, Qin Gu, Huijun Wu, Waseem Raza, Alwina Hanif, Liming Wu, Massawe V. Colman, Xuewen Gao
    Frontiers in Microbiology.2017;[Epub]     CrossRef
  • Molecular Basis of Endophytic Bacillus megaterium-induced Growth Promotion in Arabidopsis thaliana: Revelation by Microarray-based Gene Expression Analysis
    Munjal Vibhuti, A. Kumar, Neelam Sheoran, Agisha Valiya Nadakkakath, Santhosh J. Eapen
    Journal of Plant Growth Regulation.2017; 36(1): 118.     CrossRef
  • Effect of volatile compounds produced by Ralstonia solanacearum on plant growth promoting and systemic resistance inducing potential of Bacillus volatiles
    Hafiz Abdul Samad Tahir, Qin Gu, Huijun Wu, Waseem Raza, Asma Safdar, Ziyang Huang, Faheem Uddin Rajer, Xuewen Gao
    BMC Plant Biology.2017;[Epub]     CrossRef
  • Volatiles emitted by Bacillus sp. BCT9 act as growth modulating agents on Lactuca sativa seedlings
    Paola Fincheira, Leonardo Parra, Ana Mutis, Maribel Parada, Andrés Quiroz
    Microbiological Research.2017; 203: 47.     CrossRef
  • Sweet scents from good bacteria: Case studies on bacterial volatile compounds for plant growth and immunity
    Joon-hui Chung, Geun Cheol Song, Choong-Min Ryu
    Plant Molecular Biology.2016; 90(6): 677.     CrossRef
  • Volatile compounds emitted by diverse phytopathogenic microorganisms promote plant growth and flowering through cytokinin action
    Ángela María Sánchez‐López, Marouane Baslam, Nuria De Diego, Francisco José Muñoz, Abdellatif Bahaji, Goizeder Almagro, Adriana Ricarte‐Bermejo, Pablo García‐Gómez, Jun Li, Jan F. Humplík, Ondřej Novák, Lukáš Spíchal, Karel Doležal, Edurne Baroja‐Fernánde
    Plant, Cell & Environment.2016; 39(12): 2592.     CrossRef
  • Genotyping and identification of broad spectrum antimicrobial volatiles in black pepper root endophytic biocontrol agent, Bacillus megaterium BP17
    Vibhuti Munjal, Agisha Valiya Nadakkakath, Neelam Sheoran, Aditi Kundu, Vibina Venugopal, Kesavan Subaharan, Suseelabhai Rajamma, Santhosh J. Eapen, Aundy Kumar
    Biological Control.2016; 92: 66.     CrossRef
  • Bacterial-Plant-Interactions: Approaches to Unravel the Biological Function of Bacterial Volatiles in the Rhizosphere
    Marco Kai, Uta Effmert, Birgit Piechulla
    Frontiers in Microbiology.2016;[Epub]     CrossRef
  • Stop and smell the fungi: Fungal volatile metabolites are overlooked signals involved in fungal interaction with plants
    Ningxiao Li, Alsayed Alfiky, Martha M. Vaughan, Seogchan Kang
    Fungal Biology Reviews.2016; 30(3): 134.     CrossRef
  • Beneficial Microbes Affect Endogenous Mechanisms Controlling Root Development
    Eline H. Verbon, Louisa M. Liberman
    Trends in Plant Science.2016; 21(3): 218.     CrossRef
  • Bacillus methylotrophicus Strain NKG-1, Isolated from Changbai Mountain, China, Has Potential Applications as a Biofertilizer or Biocontrol Agent
    Beibei Ge, Binghua Liu, Thinn Thinn Nwet, Wenjun Zhao, Liming Shi, Kecheng Zhang, Vijai Gupta
    PLOS ONE.2016; 11(11): e0166079.     CrossRef
  • Growth promotion of Lactuca sativa in response to volatile organic compounds emitted from diverse bacterial species
    Paola Fincheira, Herbert Venthur, Ana Mutis, Maribel Parada, Andrés Quiroz
    Microbiological Research.2016; 193: 39.     CrossRef
  • Influence of rhizobacterial volatiles on the root system architecture and the production and allocation of biomass in the model grass Brachypodium distachyon (L.) P. Beauv.
    Pierre Delaplace, Benjamin M. Delory, Caroline Baudson, Magdalena Mendaluk-Saunier de Cazenave, Stijn Spaepen, Sébastien Varin, Yves Brostaux, Patrick du Jardin
    BMC Plant Biology.2015;[Epub]     CrossRef
  • Identification of mVOCs from Andean Rhizobacteria and Field Evaluation of Bacterial and Mycorrhizal Inoculants on Growth of Potato in its Center of Origin
    Siva L. S. Velivelli, Peter Kromann, Paul Lojan, Mercy Rojas, Javier Franco, Juan Pablo Suarez, Barbara Doyle Prestwich
    Microbial Ecology.2015; 69(3): 652.     CrossRef
  • Chemical diversity of microbial volatiles and their potential for plant growth and productivity
    Chidananda Nagamangala Kanchiswamy, Mickael Malnoy, Massimo E. Maffei
    Frontiers in Plant Science.2015;[Epub]     CrossRef
  • Plant growth-promoting bacteria in regulation of plant resistance to stress factors
    I. V. Maksimov, S. V. Veselova, T. V. Nuzhnaya, E. R. Sarvarova, R. M. Khairullin
    Russian Journal of Plant Physiology.2015; 62(6): 715.     CrossRef
  • Plant growth-promoting rhizobacteria act as biostimulants in horticulture
    Maurizio Ruzzi, Ricardo Aroca
    Scientia Horticulturae.2015; 196: 124.     CrossRef
  • Effects of volatile organic compounds from Streptomyces albulus NJZJSA2 on growth of two fungal pathogens
    Yuncheng Wu, Jun Yuan, Yaoyao E, Waseem Raza, Qirong Shen, Qiwei Huang
    Journal of Basic Microbiology.2015; 55(9): 1104.     CrossRef
  • Bioprospecting bacterial and fungal volatiles for sustainable agriculture
    Chidananda Nagamangala Kanchiswamy, Mickael Malnoy, Massimo E. Maffei
    Trends in Plant Science.2015; 20(4): 206.     CrossRef
  • Temporal Changes in the Neonatal Recognition Cue of Dohne Merino Lambs (Ovis aries)
    M. Z. Viviers, B. V. Burger, N. J. le Roux, J. Morris, M. le Roux
    Chemical Senses.2014; 39(3): 249.     CrossRef
  • Bacterial Ammonia Causes Significant Plant Growth Inhibition
    Teresa Weise, Marco Kai, Birgit Piechulla, Frederik Börnke
    PLoS ONE.2013; 8(5): e63538.     CrossRef
  • Identification of Volatiles Produced by Cladosporium cladosporioides CL-1, a Fungal Biocontrol Agent That Promotes Plant Growth
    Diby Paul, Kyung Park
    Sensors.2013; 13(10): 13969.     CrossRef
  • Plant growth promoting rhizobacterium Proteus vulgaris JBLS202 stimulates the seedling growth of Chinese cabbage through indole emission
    Sang-Mi Yu, Yong Hoon Lee
    Plant and Soil.2013; 370(1-2): 485.     CrossRef
  • Rapid Identification of Polyhydroxyalkanoate Accumulating Members of Bacillales Using Internal Primers forphaCGene ofBacillus megaterium
    Pramoda Kumar Nayak, Ajeet Kumar Mohanty, Teja Gaonkar, Ashwani Kumar, Saroj N. Bhosle, Sandeep Garg
    ISRN Bacteriology.2013; 2013: 1.     CrossRef
  • Production of Bioactive Volatiles by Different Burkholderia ambifaria Strains
    Ulrike Groenhagen, Rita Baumgartner, Aurélien Bailly, Amber Gardiner, Leo Eberl, Stefan Schulz, Laure Weisskopf
    Journal of Chemical Ecology.2013; 39(7): 892.     CrossRef
  • The modulating effect of bacterial volatiles on plant growth
    Aurélien Bailly, Laure Weisskopf
    Plant Signaling & Behavior.2012; 7(1): 79.     CrossRef
Role of Heavy Metal Resistant Ochrobactrum sp. and Bacillus spp. Strains in Bioremediation of a Rice Cultivar and Their PGPR Like Activities
Sanjeev Pandey , Pallab Kumar Ghosh , Sisir Ghosh , Tarun Kumar De , Tushar Kanti Maiti
J. Microbiol. 2013;51(1):11-17.   Published online March 2, 2013
DOI: https://doi.org/10.1007/s12275-013-2330-7
  • 260 View
  • 1 Download
  • 127 Crossref
AbstractAbstract PDF
The present study demonstrates the metal toxicity ameliorating and growth promoting abilities of three different bacterial isolates when applied to rice as host plant. The three bacterial strains included a cadmium resistant Ochrobactrum sp., a lead resistant Bacillus sp. and an arsenic resistant Bacillus sp. designated as CdSP9, PbSP6, and AsSP9, respectively. When these isolates were used as inocula applied to metaltreated rice plants of variety Satabdi, the germination percentage, relative root elongation (RRE), amylase and protease activities were increased. The toxic effect of metal was reduced in presence of these bacteria. The overall biomass and root/shoot ratio were also enhanced by bacterial inoculation. Hydroponic studies showed that the superoxide dismutase (SOD) activity and malondialdehyde (MDA) level, which had been increased in the presence of metal stress in rice roots, were lowered by the bacterial inoculation. In addition, all three strains were 1-aminocyclopropane-1-carboxylate (ACC) deaminase and catalase positive, whereas siderophore producing ability was lacking in PbSP6. However, both PbSP6 and AsSP9 were protease positive and could hydrolyse starch. The data indicate that these bacteria have promise for bioremediation as well as for plant growth promotion.

Citations

Citations to this article as recorded by  
  • Uptake and Translocation of Cd from Saline-Alkali Soil by Tall Fescue Associated with Talaromyces helicus
    Mengxiong Li, Xiaodan Fan, Teng Li, Yibo Han, Yuanhao Chen
    Soil and Sediment Contamination: An International Journal.2025; 34(8): 2419.     CrossRef
  • Cu-tolerant Klebsiella variicola SRB-4 increased the nanoparticle (NP) stress resilience in garden peas (Pisum sativum L.) raised in soil polluted with varying doses of copper oxide (CuO)-NP
    Mohammad Danish, Mohammad Shahid, Zaryab Shafi, Mohammad Abul Farah, Khalid Mashay Al-Anazi
    World Journal of Microbiology and Biotechnology.2025;[Epub]     CrossRef
  • Unveiling the Plant Growth-Promoting Abilities and Abiotic Stress Resistance of Bacillus glycinifermentans IS-2T through Functional and Genomic Analysis
    Mayssa Belhassan, Ameny Farhat, Fériel Bouzid, Amine Elleuch, Bassem Khemakhem
    Biocatalysis and Agricultural Biotechnology.2025; : 103826.     CrossRef
  • Potential genetic characteristics of Bacillus velezensis LZUR632 enhance the resistance of Achnatherum inebrians to Cd stress by altering rhizosphere microbial community composition and functional genes
    Jie Jin, Chao Wang, Ronggui Liu, Rong Zheng, Maohua Deng, Jianfeng Wang, Chunjie Li
    Plant and Soil.2025; 514(1): 1387.     CrossRef
  • Insights to arsenic toxicity: its ecotoxicological health effects, potential microbes and detoxification mechanisms
    Nishan Sengupta, Monika Sogani, Anees Ahmed Yunus Khan, Keshava Balakrishna, Zainab Syed, Karishma Maheshwari, Jayana Rajvanshi, Damini Gupta, Himanshi Sen
    Bioremediation Journal.2025; : 1.     CrossRef
  • Elicitors fortifies the plant resilience against metal and metalloid stress
    Parammal Faseela, Mathew Veena, Akhila Sen, K. S. Anjitha, K. P. Raj Aswathi, Palliyath Sruthi, Jos T. Puthur
    International Journal of Phytoremediation.2025; 27(3): 372.     CrossRef
  • Modifications in Metabolomic Profile of Andrographis paniculata by Arsenic Tolerance Herbaspirillum sp.: Perception into Plant–Microbe Interactions
    R. Santhoshkumar, A. Hima Parvathy, E. V. Soniya
    Journal of Plant Growth Regulation.2025; 44(7): 3713.     CrossRef
  • Tomato Seed Inoculation with Bacillus subtilis Biofilm Mitigates Toxic Effects of Excessive Copper in the Substrate
    Gabriela Cristina Sarti, Antonio Paz-González, Josefina Ana Eva Cristóbal-Míguez, Gonzalo Arnedillo, Ana Rosa García, Mirta Esther Galelli
    Processes.2025; 13(8): 2509.     CrossRef
  • Effect of flax rhizobacteria on germination and seedling growth under copper toxicity
    Murat Güler, Sancar Fatıh Ozcan, Burak Önol
    International Journal of Agriculture Environment and Food Sciences.2025; 9(2): 477.     CrossRef
  • Exploring Novel Microbial Approaches for Enhancing Crop Resilience to Abiotic Stress: Mechanisms and Applications
    Ines Harzli, Karam Mostafa, Vildan Akin Mutlu, Imran Haider Shamsi, Musa Kavas
    Physiologia Plantarum.2025;[Epub]     CrossRef
  • The Role of Plant Growth-Promoting Bacteria in Soil Restoration: A Strategy to Promote Agricultural Sustainability
    Mario Maciel-Rodríguez, Francisco David Moreno-Valencia, Miguel Plascencia-Espinosa
    Microorganisms.2025; 13(8): 1799.     CrossRef
  • Effect of Compost and Lead Tolerant Bacillus sp. Strain N18 on Growth and Pb Uptake in Tomato Plants
    Muhammad Hamza, Muhammad Fakhar-u-Zaman Akhtar, Farheen Nazli, Humera Aziz, Muhammad Rizwan, Azhar Hussain, Maqshoof Ahmad
    Waste and Biomass Valorization.2025; 16(8): 4259.     CrossRef
  • Fluoride Resistant Bacillus paralicheniformis (MSO5) Isolated from Halophytic Zone of Coringa Mangrove Wildlife Sanctuary
    Kovvali Sri Krishna Chaitanya, Jinka Rajeswari, D.V.V. Satyanarayana Raju, Viswanadham Allada
    Journal of Pure and Applied Microbiology.2025; 19(1): 582.     CrossRef
  • Screening of plant growth-promoting rhizobacteria helps alleviate the joint toxicity of PVC+Cd pollution in sorghum plants
    Yu Zhang, Si-Yu Zhao, Ruo-Han Zhang, B. Larry Li, Yu-Ying Li, Hui Han, Peng-Fei Duan, Zhao-Jin Chen
    Environmental Pollution.2024; 355: 124201.     CrossRef
  • Phytoremediation technology for recovery of Ni by Acacia plants in association with Bacillus amyloliquefaciens isolated from E-waste contaminated site
    Pinida Joradon, Toemthip Poolpak, Maleeya Kruatrachue, Kwang Mo Yang, Patompong Saengwilai, Suchart Upatham, Prayad Pokethitiyook
    International Journal of Phytoremediation.2024; 26(6): 903.     CrossRef
  • Application of bacterial agent YH for remediation of pyrene-heavy metal co-pollution system: Efficiency, mechanism, and microbial response
    Yuhua Su, Mingjun Zhu, Hang Zhang, Hongxu Chen, Jiguo Wang, Chaocheng Zhao, Qiyou Liu, Yingying Gu
    Journal of Environmental Management.2024; 351: 119841.     CrossRef
  • Nano-biogenic heavy metals adsorptive remediation for enhanced soil health and sustainable agricultural production
    Ayush Jha, Bindiya Barsola, Diksha Pathania, Sonu, Pankaj Raizada, Pankaj Thakur, Pardeep Singh, Sarvesh Rustagi, Ajit Khosla, Vishal Chaudhary
    Environmental Research.2024; 252: 118926.     CrossRef
  • PGPR-Enabled bioremediation of pesticide and heavy metal-contaminated soil: A review of recent advances and emerging challenges
    Indu Sharma, Shivika Sharma, Vikas Sharma, Anil Kumar Singh, Aksh Sharma, Ajay Kumar, Joginder Singh, Ashutosh Sharma
    Chemosphere.2024; 362: 142678.     CrossRef
  • Priestia aryabhattai MBM3-Mediated Enhancement of Sulphur Metabolism in Brassica campestris
    Manjistha Baruah, Manuranjan Gogoi, Robin Chandra Boro, Madhumita Barooah
    Current Microbiology.2024;[Epub]     CrossRef
  • Bacterial biostimulants for climate smart agriculture practices: Mode of action, effect on plant growth and roadmap for commercial products
    Ravinder Singh, Sehijpreet Kaur, Sukhveer S. Bhullar, Hardeep Singh, Lakesh K. Sharma
    Journal of Sustainable Agriculture and Environment.2024;[Epub]     CrossRef
  • Bioremediation of Hexavalent Chromium (Cr6+) by Active Cell Serratia odorifera TIU10 (STIU10) That Improves Growth and Reduces Bioaccumulation Factor of Vigna radiata L. in Chromium Contaminated Soil
    Sohini Chakraborty, Sandhimita Mondal
    Water, Air, & Soil Pollution.2024;[Epub]     CrossRef
  • Isolation and identification of a new Bacillus glycinifermentans strain from date palm rhizosphere and its effect on barley seeds under heavy metal stress
    Mayssa belhassan, Ameny Farhat, Hanen El Abed, Zayneb Chaabeen, Fériel Bouzid, Amine Elleuch, Imen fendri, Bassem Khemakhem
    Brazilian Journal of Microbiology.2024; 55(1): 843.     CrossRef
  • Enhanced Growth and Contrasting Effects on Arsenic Phytoextraction in Pteris vittata through Rhizosphere Bacterial Inoculations
    Maria Luisa Antenozio, Gianluigi Giannelli, Rosaria Fragni, Diego Baragaño, Patrizia Brunetti, Giovanna Visioli, Maura Cardarelli
    Plants.2024; 13(15): 2030.     CrossRef
  • Brucella pituitosa strain BU72, a new hydrocarbonoclastic bacterium through exopolysaccharide-based surfactant production
    Mouna Mahjoubi, Hanene Cherif, Habibu Aliyu, Habib Chouchane, Simone Cappello, Mohamed Neifar, Francesca Mapelli, Yasmine Souissi, Sara Borin, Don A. Cowan, Ameur Cherif
    International Microbiology.2024; 28(2): 299.     CrossRef
  • Microbial Amelioration of Heavy Metal Toxicity in Plants for Agro-Environmental Sustainability
    Divjot Kour, Babita Sharma, Rajeshwari Negi, Sanjeev Kumar, Simranjeet Kaur, Tanvir Kaur, Sofia Sharief Khan, Harpreet Kour, Seema Ramniwas, Sarvesh Rustegi, Ashutosh Kumar Rai, Sangram Singh, Sheikh Shreaz, Ajar Nath Yadav, Amrik Singh Ahluwalia
    Water, Air, & Soil Pollution.2024;[Epub]     CrossRef
  • The Effect of Larval Exposure to Heavy Metals on the Gut Microbiota Composition of Adult Anopheles arabiensis (Diptera: Culicidae)
    Ashmika Singh, Shristi Misser, Mushal Allam, Wai-Yin Chan, Arshad Ismail, Givemore Munhenga, Shüné V. Oliver
    Tropical Medicine and Infectious Disease.2024; 9(10): 249.     CrossRef
  • SIDERÓFOROS DE RIZOBACTERIAS Y SU APLICACIÓN EN LA BIORREMEDIACIÓN
    Néstor Fabián Galvis Serrano
    Ciencia en Desarrollo.2024;[Epub]     CrossRef
  • Role of Plant-Growth-Promoting Rhizobacteria in Plant Machinery for Soil Heavy Metal Detoxification
    Haichen Qin, Zixiao Wang, Wenya Sha, Shuhong Song, Fenju Qin, Wenchao Zhang
    Microorganisms.2024; 12(4): 700.     CrossRef
  • Exploring Plant–Bacterial Symbiosis for Eco-Friendly Agriculture and Enhanced Resilience
    Muhammad Qadir, Amjad Iqbal, Anwar Hussain, Adil Hussain, Farooq Shah, Byung-Wook Yun, Bong-Gyu Mun
    International Journal of Molecular Sciences.2024; 25(22): 12198.     CrossRef
  • An Evaluation of Long-Term Contaminated Soil from a Manufactured Gas Plant for in Situ Biodegradation Potential and as a Source of Ferrocyanide-Degrading Bacteria
    Aleksandra Chojnacka, Magdalena Sut-Lohmann, Jerzy Jonczak, Joanna Banasiewicz, Anna Detman-Ignatowska, Anna Sikora
    Water, Air, & Soil Pollution.2024;[Epub]     CrossRef
  • ACC Deaminase Producing Phytomicrobiomes for Amelioration of Abiotic Stresses in Plants for Agricultural Sustainability
    Divjot Kour, Sofia Sharief Khan, Harpreet Kour, Tanvir Kaur, Rubee Devi, Ashutosh Kumar Rai, Ajar Nath Yadav
    Journal of Plant Growth Regulation.2024; 43(4): 963.     CrossRef
  • Plant growth-promoting Bacillus cereus MCC3402 facilitates rice seedling growth under arsenic-spiked soil
    Pallab Kumar Ghosh, Krishnendu Pramanik, Kalyan Mahapatra, Sayanta Mondal, Sudip Kumar Ghosh, Antara Ghosh, Tushar Kanti Maiti
    Biocatalysis and Agricultural Biotechnology.2024; 61: 103405.     CrossRef
  • Characterization of As(III)-oxidizing bacteria Acinetobacter sp. TMKU7 having plant growth promoting features for possible application in arsenic-contaminated crop field
    Archika Dutta, Samir Kumar Mukherjee, Sk Tofajjen Hossain
    Bioremediation Journal.2024; 28(4): 457.     CrossRef
  • Metal-tolerant morganella morganii isolates can potentially mediate nickel stress tolerance in Arabidopsis by upregulating antioxidative enzyme activities
    Tahir Naqqash, Aeman Aziz, Muhammad Baber, Muhammad Shahid, Muhammad Sajid, Radicetti Emanuele, Abdel-Rhman Z. Gaafar, Mohamed S. Hodhod, Ghulam Haider
    Plant Signaling & Behavior.2024;[Epub]     CrossRef
  • Current status and future prospect of managing lead (Pb) stress through microbes for sustainable agriculture
    Sapna Chandwani, Rinkal Kayasth, Hetvi Naik, Natarajan Amaresan
    Environmental Monitoring and Assessment.2023;[Epub]     CrossRef
  • Plant growth promoting rhizobacterium Bacillus sp. BSE01 alleviates salt toxicity in chickpea (Cicer arietinum L.) by conserving ionic, osmotic, redox and hormonal homeostasis
    Sahana Basu, Surbhi Kumari, Pritee Subhadarshini, Aniket Kumar Rishu, Shashi Shekhar, Gautam Kumar
    Physiologia Plantarum.2023;[Epub]     CrossRef
  • Heavy‐metal tolerant bacterial strains isolated from industrial sites and scrap yards in Kashmir, India
    Burhan Hamid, Neesa Majeed, Bashir Ahmad Ganai, Shahnawaz Hassan, Zaffar Bashir, Parvaze Ahmad Wani, Kahkashan Perveen, R. Z. Sayyed
    Journal of Basic Microbiology.2023; 63(12): 1361.     CrossRef
  • Unlocking the hidden potential of Mexican teosinte seeds: revealing plant growth-promoting bacterial and fungal biocontrol agents
    Esaú De-la-Vega-Camarillo, Juan Alfredo Hernández-García, Lourdes Villa-Tanaca, César Hernández-Rodríguez
    Frontiers in Plant Science.2023;[Epub]     CrossRef
  • Bacterial ACC deaminase: Insights into enzymology, biochemistry, genetics, and potential role in amelioration of environmental stress in crop plants
    Mohammad Shahid, Udai B. Singh, Mohammad Saghir Khan, Prakash Singh, Ratan Kumar, Raj Narian Singh, Arun Kumar, Harsh V. Singh
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Bioprospecting acid- and arsenic-tolerant plant growth-promoting rhizobacteria for mitigation of arsenic toxicity in acidic agricultural soils
    Nirmala Akoijam, Santa Ram Joshi
    Archives of Microbiology.2023;[Epub]     CrossRef
  • Bacterial Communities Associated with the Roots of Typha spp. and Its Relationship in Phytoremediation Processes
    Joana Guadalupe Martínez-Martínez, Stephanie Rosales-Loredo, Alejandro Hernández-Morales, Jackeline Lizzeta Arvizu-Gómez, Candy Carranza-Álvarez, José Roberto Macías-Pérez, Gisela Adelina Rolón-Cárdenas, Juan Ramiro Pacheco-Aguilar
    Microorganisms.2023; 11(6): 1587.     CrossRef
  • Potential use of Bacillus spp. as an effective biostimulant against abiotic stresses in crops—A review
    Hassan Etesami, Byoung Ryong Jeong, Bernard R. Glick
    Current Research in Biotechnology.2023; 5: 100128.     CrossRef
  • Potential of methyltransferase containing Pseudomonas oleovorans for abatement of arsenic toxicity in rice
    Vandana Anand, Jasvinder Kaur, Sonal Srivastava, Vidisha Bist, Varsha Dharmesh, Kriti Kriti, Saraswati Bisht, Pankaj Kumar Srivastava, Suchi Srivastava
    Science of The Total Environment.2023; 856: 158944.     CrossRef
  • Synergism of plant microbe interactions for remediation of potentially toxic elements
    Ranjna Kaundal, Vipin Parkash, Supriti Paul, Meghna Thapa
    Journal of Forest Science.2023; 69(4): 127.     CrossRef
  • Comparative Genomics Reveals Novel Species and Insights into the Biotechnological Potential, Virulence, and Resistance of Alcaligenes
    Francisnei Pedrosa-Silva, Thiago M. Venancio
    Genes.2023; 14(9): 1783.     CrossRef
  • Rhizosphere: An Ideal Site for PGPR Screening
    Ambreen Ahmed, Aqsa Tariq
    Futuristic Biotechnology.2023; : 07.     CrossRef
  • Bioremediation of Heavy Metals by the Genus Bacillus
    Monika Wróbel, Wojciech Śliwakowski, Paweł Kowalczyk, Karol Kramkowski, Jakub Dobrzyński
    International Journal of Environmental Research and Public Health.2023; 20(6): 4964.     CrossRef
  • Bacteria in Soil: Promising Bioremediation Agents in Arid and Semi-Arid Environments for Cereal Growth Enhancement
    Abdelwahab Rai, Mohamed Belkacem, Imen Assadi, Jean-Claude Bollinger, Walid Elfalleh, Aymen Amine Assadi, Abdeltif Amrane, Lotfi Mouni
    Applied Sciences.2022; 12(22): 11567.     CrossRef
  • Bioremediation of a saline-alkali soil polluted with Zn using ryegrass associated with Fusarium incarnatum
    Jinxuan Zhang, Xiaodan Fan, Xueqi Wang, Yinbing Tang, Hao Zhang, Zhengtong Yuan, Jiaying Zhou, Yibo Han, Teng Li
    Environmental Pollution.2022; 312: 119929.     CrossRef
  • Sustainability assessment of topsoil ecology in Chongqing, China based on the application of livestock and poultry manure
    Wanyi Zhao, Jibao Deng, Sunlin Chi, Weizhong Wang, Longshui Xu, Qizhong Huang, Yimo Zhang, Ximao Yu, Jian Xu, Yucheng Chen, Weihong Xu
    Journal of Cleaner Production.2022; 358: 131969.     CrossRef
  • Leveraging arsenic resistant plant growth-promoting rhizobacteria for arsenic abatement in crops
    Saurabh Kumar, Arbind Kumar Choudhary, Deep Chandra Suyal, Govind Makarana, Reeta Goel
    Journal of Hazardous Materials.2022; 425: 127965.     CrossRef
  • Cadmium-Tolerant Plant Growth-Promoting Bacteria Curtobacterium oceanosedimentum Improves Growth Attributes and Strengthens Antioxidant System in Chili (Capsicum frutescens)
    Mitesh Patel, Kartik Patel, Lamya Ahmed Al-Keridis, Nawaf Alshammari, Riadh Badraoui, Abdelbaset Mohamed Elasbali, Waleed Abu Al-Soud, Md Imtaiyaz Hassan, Dharmendra Kumar Yadav, Mohd Adnan
    Sustainability.2022; 14(7): 4335.     CrossRef
  • A fungus (Trametes pubescens) resists cadmium toxicity by rewiring nitrogen metabolism and enhancing energy metabolism
    Jing Liu, Pengcheng Fu, Li Wang, Xiuying Lin, Naeimeh Enayatizamir
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • An Insight into Microbes Mediated Heavy Metal Detoxification in Plants: a Review
    Rajni Devi, Biswaranjan Behera, Md Basit Raza, Vikas Mangal, Muhammad Ahsan Altaf, Ravinder Kumar, Awadhesh Kumar, Rahul Kumar Tiwari, Milan Kumar Lal, Brajesh Singh
    Journal of Soil Science and Plant Nutrition.2022; 22(1): 914.     CrossRef
  • Harnessing plant microbiome for mitigating arsenic toxicity in sustainable agriculture
    Sajad Ali, Anshika Tyagi, Muntazir Mushtaq, Henda Al-Mahmoudi, Hanhong Bae
    Environmental Pollution.2022; 300: 118940.     CrossRef
  • Microbe-Assisted Alleviation of Heavy Metal Toxicity in Plants: A Review
    Satyabrata Nanda, Gagan Kumar, Rukmini Mishra, Raj Kumar Joshi
    Geomicrobiology Journal.2022; 39(3-5): 416.     CrossRef
  • Bacterial Volatile-Mediated Suppression of Root-Knot Nematode (Meloidogyne incognita)
    Ting Yang, Yi Xin, Tongyao Liu, Zhengfeng Li, Xingzhong Liu, Yunpeng Wu, Mingfeng Wang, Meichun Xiang
    Plant Disease.2022; 106(5): 1358.     CrossRef
  • Assessment of dynamic microbial community structure and rhizosphere interactions during bioaugmented phytoremediation of petroleum contaminated soil by a newly designed rhizobox system
    Kwang Mo Yang, Toemthip Poolpak, Prayad Pokethitiyook, Maleeya Kruatrachue
    International Journal of Phytoremediation.2022; 24(14): 1505.     CrossRef
  • Role of ACC deaminase producing bacteria for abiotic stress management and sustainable agriculture production
    Sapna Chandwani, Natarajan Amaresan
    Environmental Science and Pollution Research.2022; 29(16): 22843.     CrossRef
  • Microbial Contributions for Rice Production: From Conventional Crop Management to the Use of ‘Omics’ Technologies
    Febri Doni, Nurul Shamsinah Mohd Suhaimi, Muhamad Shakirin Mispan, F Fathurrahman, Betty Mayawatie Marzuki, Joko Kusmoro, Norman Uphoff
    International Journal of Molecular Sciences.2022; 23(2): 737.     CrossRef
  • Effect of rhizosphere bacteria on antioxidant enzymes and some biochemical characteristics of Medicago sativa L. subjected to herbicide stress
    Marzieh Motamedi, Morteza Zahedi, Hassan Karimmojeni, Hossein Motamedi, Andrea Mastinu
    Acta Physiologiae Plantarum.2022;[Epub]     CrossRef
  • Arsenic-Induced Oxidative Stress and Antioxidant Defense in Plants
    Kamrun Nahar, Mohammad Saidur Rhaman, Khursheda Parvin, Kirti Bardhan, Deyvid Novaes Marques, Pedro García-Caparrós, Mirza Hasanuzzaman
    Stresses.2022; 2(2): 179.     CrossRef
  • Microbes as Biofertilizers, a Potential Approach for Sustainable Crop Production
    Shaista Nosheen, Iqra Ajmal, Yuanda Song
    Sustainability.2021; 13(4): 1868.     CrossRef
  • Abatement of arsenic-induced phytotoxic effects in rice seedlings by an arsenic-resistant Pantoea dispersa strain
    Antara Ghosh, Krishnendu Pramanik, Shatabda Bhattacharya, Sayanta Mondal, Sudip Kumar Ghosh, Pallab Kumar Ghosh, Tushar Kanti Maiti
    Environmental Science and Pollution Research.2021; 28(17): 21633.     CrossRef
  • Heavy metals bio-removal potential of the isolated Klebsiella sp TIU20 strain which improves growth of economic crop plant (Vigna radiata L.) under heavy metals stress by exhibiting plant growth promoting and protecting traits
    Sohini Chakraborty, Shatabdi Das, Satarupa Banerjee, Sukannya Mukherjee, Arnab Ganguli, Sandhimita Mondal
    Biocatalysis and Agricultural Biotechnology.2021; 38: 102204.     CrossRef
  • Plant Growth Promoting Rhizobacteria (PGPR) as Green Bioinoculants: Recent Developments, Constraints, and Prospects
    Anirban Basu, Priyanka Prasad, Subha Narayan Das, Sadaf Kalam, R. Z. Sayyed, M. S. Reddy, Hesham El Enshasy
    Sustainability.2021; 13(3): 1140.     CrossRef
  • Unraveling the role of plant growth-promoting rhizobacteria in the alleviation of arsenic phytotoxicity: A review
    Sayanta Mondal, Krishnendu Pramanik, Sudip Kumar Ghosh, Priyanka Pal, Tanushree Mondal, Tithi Soren, Tushar Kanti Maiti
    Microbiological Research.2021; 250: 126809.     CrossRef
  • Epiphytic PGPB Bacillus megaterium AFI1 and Paenibacillus nicotianae AFI2 Improve Wheat Growth and Antioxidant Status under Ni Stress
    Veronika N. Pishchik, Polina S. Filippova, Galina V. Mirskaya, Yuriy V. Khomyakov, Vitaliy E. Vertebny, Viktoriya I. Dubovitskaya, Yuliya V. Ostankova, Aleksandr V. Semenov, Debasis Chakrabarty, Evgeny V. Zuev, Vladimir K. Chebotar
    Plants.2021; 10(11): 2334.     CrossRef
  • Newly isolated Bacillus sp. PS-6 assisted phytoremediation of heavy metals using Phragmites communis: Potential application in wastewater treatment
    Pooja Sharma, Sonam Tripathi, Preeti Chaturvedi, Deepshi Chaurasia, Ram Chandra
    Bioresource Technology.2021; 320: 124353.     CrossRef
  • Efficacy of Indole Acetic Acid and Exopolysaccharides-Producing Bacillus safensis Strain FN13 for Inducing Cd-Stress Tolerance and Plant Growth Promotion in Brassica juncea (L.)
    Farheen Nazli, Xiukang Wang, Maqshoof Ahmad, Azhar Hussain, Bushra, Abubakar Dar, Muhammad Nasim, Moazzam Jamil, Nalun Panpluem, Adnan Mustafa
    Applied Sciences.2021; 11(9): 4160.     CrossRef
  • Characterization of Heavy Metal Tolerant and Plant Growth-Promoting Rhizobacteria Isolated from Soil Contaminated with Heavy Metal and Diesel
    Soo Yeon Lee, Yun-Yeong Lee, Kyung-Suk Cho
    Microbiology and Biotechnology Letters.2021;[Epub]     CrossRef
  • Growth and Yield Response of Upland Rice to Application of Plant Growth-Promoting Rhizobacteria
    Harry Jay M. Cavite, Ariel G. Mactal, Editha V. Evangelista, Jayvee A. Cruz
    Journal of Plant Growth Regulation.2021; 40(2): 494.     CrossRef
  • Bacillus pumilus induced tolerance of Maize (Zea mays L.) against Cadmium (Cd) stress
    Asim Shahzad, Mingzhou Qin, Mahmood Elahie, Muhammad Naeem, Tasmia Bashir, Humaira Yasmin, Muhammad Younas, Ahsan Areeb, Muhammad Irfan, Motsim Billah, Abdul Shakoor, Saman Zulfiqar
    Scientific Reports.2021;[Epub]     CrossRef
  • The potential of PGPR in bioremediation of soils with heavy metal contamination
    Purvi Badodekar
    International Journal of Agricultural and Applied Sciences.2021; 2(2): 20.     CrossRef
  • High level expression and biochemical characterization of an alkaline serine protease from Geobacillus stearothermophilus to prepare antihypertensive whey protein hydrolysate
    Chang Chang, Siyi Gong, Zhiping Liu, Qiaojuan Yan, Zhengqiang Jiang
    BMC Biotechnology.2021;[Epub]     CrossRef
  • Arsenic uptake and bioaccumulation in plants: A review on remediation and socio-economic perspective in Southeast Asia
    Sayan Bhattacharya, Prabhakar Sharma, Sayantan Mitra, Ivy Mallick, Abhrajyoti Ghosh
    Environmental Nanotechnology, Monitoring & Management.2021; 15: 100430.     CrossRef
  • Cadmium stress in paddy fields: Effects of soil conditions and remediation strategies
    Babar Hussain, Muhammad Nadeem Ashraf, Shafeeq-ur-Rahman, Aqleem Abbas, Jumei Li, Muhammad Farooq
    Science of The Total Environment.2021; 754: 142188.     CrossRef
  • Malathion biodegradation by a psychrotolerant bacteria Ochrobactrum sp. M1D and metabolic pathway analysis
    S. Verma, D. Singh, S. Chatterjee
    Letters in Applied Microbiology.2021; 73(3): 326.     CrossRef
  • Impact of abiotic stressors on native rhizospheric bacterial community of Cajanus cajan
    Gautam Anand, Virendra S. Bisaria, Shilpi Sharma
    Journal of Basic Microbiology.2020; 60(1): 4.     CrossRef
  • Prevalence of antibiotic-resistant, toxic metal-tolerant and biofilm-forming bacteria in hospital surroundings
    Soumitra Nath, Ahana Sinha, Y. Suchitra Singha, Ankita Dey, Nilakshi Bhattacharjee, Bibhas Deb
    Environmental Analysis Health and Toxicology.2020; 35(3): e2020018.     CrossRef
  • How does proteomics target plant environmental stresses in a semi-arid area?
    Hamid Sobhanian, Sara Pahlavan, Anna Meyfour
    Molecular Biology Reports.2020; 47(4): 3181.     CrossRef
  • A Review on Practical Application and Potentials of Phytohormone-Producing Plant Growth-Promoting Rhizobacteria for Inducing Heavy Metal Tolerance in Crops
    Farheen Nazli, Adnan Mustafa, Maqshoof Ahmad, Azhar Hussain, Moazzam Jamil, Xiukang Wang, Qaiser Shakeel, Muhammad Imtiaz, Mohamed A. El-Esawi
    Sustainability.2020; 12(21): 9056.     CrossRef
  • Comparative transcriptomic analysis reveals that multiple hormone signal transduction and carbohydrate metabolic pathways are affected by Bacillus cereus in Nicotiana tabacum
    Yueyue Li, Min Zhao, Wenwen Chen, Hongyi Du, Xiaodong Xie, Daibin Wang, Ya Dai, Qingyou Xia, Genhong Wang
    Genomics.2020; 112(6): 4254.     CrossRef
  • Diversity of Metal-Resistant and Tensoactive-Producing Culturable Heterotrophic Bacteria Isolated from a Copper Mine in Brazilian Amazonia
    Vitor Sousa Domingues, Andrea de Souza Monteiro, Aline Daniela Lopes Júlio, Ana Luiza Lemos Queiroz, Vera Lúcia dos Santos
    Scientific Reports.2020;[Epub]     CrossRef
  • Structure, gene cluster of the O antigen and biological activity of the lipopolysaccharide from the rhizospheric bacterium Ochrobactrum cytisi IPA7.2
    Elena N. Sigida, Kristina Y. Kargapolova, Alexander S. Shashkov, Evelina L. Zdorovenko, Tatyana S. Ponomaryova, Anna A. Meshcheryakova, Oksana V. Tkachenko, Gennady L. Burygin, Yuriy A. Knirel
    International Journal of Biological Macromolecules.2020; 154: 1375.     CrossRef
  • Effect of Cadmium-Tolerant Rhizobacteria on Growth Attributes and Chlorophyll Contents of Bitter Gourd under Cadmium Toxicity
    Muhammad Zafar-ul-Hye, Muhammad Naeem, Subhan Danish, Muhammad Jamil Khan, Shah Fahad, Rahul Datta, Martin Brtnicky, Antonin Kintl, Ghulam Sabir Hussain, Mohamed A. El-Esawi
    Plants.2020; 9(10): 1386.     CrossRef
  • Characterization of novel thorium tolerant Ochrobactrum intermedium AM7 in consort with assessing its EPS-Thorium binding
    Arpit Shukla, Paritosh Parmar, Dweipayan Goswami, Baldev Patel, Meenu Saraf
    Journal of Hazardous Materials.2020; 388: 122047.     CrossRef
  • Alleviation of Cd phytotoxicity and enhancement of rape seedling growth by plant growth–promoting bacterium Enterobacter sp. Zm-123
    Meng Zhang, Zonghui Jin, Xu Zhang, Guoliang Wang, Rui Li, Juanjuan Qu, Yu Jin
    Environmental Science and Pollution Research.2020; 27(26): 33192.     CrossRef
  • Phosphorus Nutrient Management through Synchronization of Application Methods and Rates in Wheat and Maize Crops
    Rafiullah, Muhammad Jamal Khan, Dost Muhammad, Shah Fahad, Muhammad Adnan, Fazli Wahid, Saud Alamri, Farmanullah Khan, Khadim Muhammad Dawar, Inam Irshad, Subhan Danish, Muhammad Arif, Amanullah, Shah Saud, Bushra Khan, Ishaq Ahmad Mian, Rahul Datta, Ta
    Plants.2020; 9(10): 1389.     CrossRef
  • Application of Transposon Insertion Sequencing to Agricultural Science
    Belinda K. Fabian, Sasha G. Tetu, Ian T. Paulsen
    Frontiers in Plant Science.2020;[Epub]     CrossRef
  • Effects of EDTA and plant growth-promoting rhizobacteria on plant growth and heavy metal uptake of hyperaccumulator Sedum alfredii Hance
    JunKang Guo, Xin Lv, HongLei Jia, Li Hua, XinHao Ren, Haris Muhammad, Ting Wei, Yongzhen Ding
    Journal of Environmental Sciences.2020; 88: 361.     CrossRef
  • Arsenic accumulation by a rhizosphere bacterial strain Ochrobactrum tritici reduces rice plant arsenic levels
    Merijn Moens, Rita Branco, Paula V. Morais
    World Journal of Microbiology and Biotechnology.2020;[Epub]     CrossRef
  • Integrated phytobial heavy metal remediation strategies for a sustainable clean environment - A review
    Saeed Ahmad Asad, Muhammad Farooq, Aftab Afzal, Helen West
    Chemosphere.2019; 217: 925.     CrossRef
  • Isolation and identification of metal-tolerant and antibiotic-resistant bacteria from soil samples of Cachar district of Assam, India
    Soumitra Nath, Payal Paul, Rajdeep Roy, Satabdi Bhattacharjee, Bibhas Deb
    SN Applied Sciences.2019;[Epub]     CrossRef
  • Cadmium-resistant rhizobacterium Bacillus cereus M4 promotes the growth and reduces cadmium accumulation in rice (Oryza sativa L.)
    Changrong Wang, Zhongqi Liu, Yongchun Huang, Yeni Zhang, Xiaohan Wang, Zhouyue Hu
    Environmental Toxicology and Pharmacology.2019; 72: 103265.     CrossRef
  • Enhancing plant growth under municipal wastewater irrigation by plant growth promoting rhizospheric Bacillus spp
    Siriruk Sarawaneeyaruk, Wanlapa Lorliam, Sukhumaporn Krajangsang, Onanong Pringsulaka
    Journal of King Saud University - Science.2019; 31(3): 384.     CrossRef
  • Cloning, expression, purification and characterisation of serine alkaline protease from Bacillus subtilis RD7
    Yewande Suberu, Idowu Akande, Titilola Samuel, Adekunle Lawal, Ademola Olaniran
    Biocatalysis and Agricultural Biotechnology.2019; 20: 101264.     CrossRef
  • Assessment of the bioremediation efficacy of the mercury resistant bacterium isolated from the Mithi River
    Bhupendra Pushkar, Pooja Sevak, Suvarna Sounderajan
    Water Supply.2019; 19(1): 191.     CrossRef
  • Pseudomonas citronellolis; a multi-metal resistant and potential plant growth promoter against arsenic (V) stress in chickpea
    Arindam Adhikary, Rajiv Kumar, Ranjna Pandir, Pankaj Bhardwaj, Ramakrishna Wusirika, Sanjeev Kumar
    Plant Physiology and Biochemistry.2019; 142: 179.     CrossRef
  • Isolation of Cadmium and Lead Tolerant Plant Growth Promoting Rhizobacteria:Lysinibacillus variansandPseudomonas putidafrom Indian Agricultural Soil
    Amit Kumar Pal, Chandan Sengupta
    Soil and Sediment Contamination: An International Journal.2019; 28(7): 601.     CrossRef
  • Bioaccumulation of cadmium by Enterobacter sp. and enhancement of rice seedling growth under cadmium stress
    Soumik Mitra, Krishnendu Pramanik, Anumita Sarkar, Pallab Kumar Ghosh, Tithi Soren, Tushar Kanti Maiti
    Ecotoxicology and Environmental Safety.2018; 156: 183.     CrossRef
  • Characterization of Cd-resistant Klebsiella michiganensis MCC3089 and its potential for rice seedling growth promotion under Cd stress
    Soumik Mitra, Krishnendu Pramanik, Pallab Kumar Ghosh, Tithi Soren, Anumita Sarkar, Ramendra Sundar Dey, Sanjeev Pandey, Tushar Kanti Maiti
    Microbiological Research.2018; 210: 12.     CrossRef
  • Characterization of As(III) oxidizing Achromobacter sp. strain N2: effects on arsenic toxicity and translocation in rice
    Anna Corsini, Milena Colombo, Claudio Gardana, Sarah Zecchin, Paolo Simonetti, Lucia Cavalca
    Annals of Microbiology.2018; 68(5): 295.     CrossRef
  • Alleviation of phytotoxic effects of cadmium on rice seedlings by cadmium resistant PGPR strain Enterobacter aerogenes MCC 3092
    Krishnendu Pramanik, Soumik Mitra, Anumita Sarkar, Tushar Kanti Maiti
    Journal of Hazardous Materials.2018; 351: 317.     CrossRef
  • ACC deaminase-producing bacteria mediated drought and salt tolerance in Capsicum annuum
    Ann Maxton, Poonam Singh, Sam A. Masih
    Journal of Plant Nutrition.2018; 41(5): 574.     CrossRef
  • A Genomic Outlook on Bioremediation: The Case of Arsenic Removal
    Frédéric Plewniak, Simona Crognale, Simona Rossetti, Philippe N. Bertin
    Frontiers in Microbiology.2018;[Epub]     CrossRef
  • Effective rhizoinoculation and biofilm formation by arsenic immobilizing halophilic plant growth promoting bacteria (PGPB) isolated from mangrove rhizosphere: A step towards arsenic rhizoremediation
    Ivy Mallick, Chandrima Bhattacharyya, Shayantan Mukherji, Dhritiman Dey, Somesh Chandra Sarkar, Ujjal Kumar Mukhopadhyay, Abhrajyoti Ghosh
    Science of The Total Environment.2018; 610-611: 1239.     CrossRef
  • Heavy Metal Stress, Signaling, and Tolerance Due to Plant-Associated Microbes: An Overview
    Shalini Tiwari, Charu Lata
    Frontiers in Plant Science.2018;[Epub]     CrossRef
  • Isolation of toxic metal-tolerant bacteria from soil and examination of their bioaugmentation potentiality by pot studies in cadmium- and lead-contaminated soil
    Soumitra Nath, Bibhas Deb, Indu Sharma
    International Microbiology.2018; 21(1-2): 35.     CrossRef
  • Inoculation of plant growth-promoting bacteria Bacillus sp. YM-1 alleviates the toxicity of Pb to pakchoi
    Sumei Yu, Jinsong Liang, Xin Bai, Liying Dong, Xuesheng Liu, Yingnan Wei, Yue Li, Siqi Huang, Juanjuan Qu
    Environmental Science and Pollution Research.2018; 25(28): 28216.     CrossRef
  • An indoleacetic acid-producingOchrobactrumsp. MGJ11 counteracts cadmium effect on soybean by promoting plant growth
    X. Yu, Y. Li, Y. Cui, R. Liu, Y. Li, Q. Chen, Y. Gu, K. Zhao, Q. Xiang, K. Xu, X. Zhang
    Journal of Applied Microbiology.2017; 122(4): 987.     CrossRef
  • Ochrobactrum sp. MPV1 from a dump of roasted pyrites can be exploited as bacterial catalyst for the biogenesis of selenium and tellurium nanoparticles
    Emanuele Zonaro, Elena Piacenza, Alessandro Presentato, Francesca Monti, Rossana Dell’Anna, Silvia Lampis, Giovanni Vallini
    Microbial Cell Factories.2017;[Epub]     CrossRef
  • Characterization of cadmium-resistant Klebsiella pneumoniae MCC 3091 promoted rice seedling growth by alleviating phytotoxicity of cadmium
    Krishnendu Pramanik, Soumik Mitra, Anumita Sarkar, Tithi Soren, Tushar Kanti Maiti
    Environmental Science and Pollution Research.2017; 24(31): 24419.     CrossRef
  • Bacillus: A Biological Tool for Crop Improvement through Bio-Molecular Changes in Adverse Environments
    Ramalingam Radhakrishnan, Abeer Hashem, Elsayed F. Abd_Allah
    Frontiers in Physiology.2017;[Epub]     CrossRef
  • In-vitro Screening of B. cepacia; C. freundii and S. marcescens for Antagonistic Efficacy
    Ann Maxton, P Singh, SM Prasad, Aruna Andy, Sam Masih
    Journal of Pure and Applied Microbiology.2017; 11(3): 1523.     CrossRef
  • Silica fertilization and nano-MnO2 amendment on bacterial community composition in high arsenic paddy soils
    Jihai Shao, Yaxian He, Huiling Zhang, Anwei Chen, Ming Lei, Junfeng Chen, Liang Peng, Ji-Dong Gu
    Applied Microbiology and Biotechnology.2016; 100(5): 2429.     CrossRef
  • Comprehensive proteomic analysis of canola leaf inoculated with a plant growth-promoting bacterium, Pseudomonas fluorescens, under salt stress
    Farzad Banaei-Asl, Davoud Farajzadeh, Ali Bandehagh, Setsuko Komatsu
    Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics.2016; 1864(9): 1222.     CrossRef
  • Bioremediation of high-strength agricultural wastewater using Ochrobactrum sp. strain SZ1
    Chin Hong Neoh, Chi Yong Lam, Suriati Mat Ghani, Ismail Ware, Siti Hajar Mat Sarip, Zaharah Ibrahim
    3 Biotech.2016;[Epub]     CrossRef
  • Purification and characterization of cloned alkaline protease gene of Geobacillus stearothermophilus
    Irfana Iqbal, Muhammad Nauman Aftab, Mohammed Afzal, Asad Ur‐Rehman, Saima Aftab, Asma Zafar, Zia Ud‐Din, Ateeque Rahman Khuharo, Jawad Iqbal, Ikram Ul‐Haq
    Journal of Basic Microbiology.2015; 55(2): 160.     CrossRef
  • Multi-omics based changes in response to cadmium toxicity in Bacillus licheniformis A
    Jing Sun, Jun Zhou, Zhonghua Wang, Weina He, Dijun Zhang, Qianqian Tong, Xiurong Su
    RSC Advances.2015; 5(10): 7330.     CrossRef
  • Bioremediation potential of an arsenic immobilizing strain Brevibacillus sp. KUMAs1 in the rhizosphere of chilli plant
    Ivy Mallick, Samir Kumar Mukherjee
    Environmental Earth Sciences.2015; 74(9): 6757.     CrossRef
  • Relative Expression of Low Molecular Weight Protein, Tyrosine Phosphatase (Wzb Gene) of Herbaspirillum sp. GW103 Toward Arsenic Stress and Molecular Modeling
    Muthusamy Govarthanan, Jung-Hee Park, Loganathan Praburaman, Young-Joo Yi, Min Cho, Hyun Myung, Shanmugam Gnanendra, Seralathan Kamala-Kannan, Byung-Taek Oh
    Current Microbiology.2015; 71(3): 311.     CrossRef
  • Fundamentals and Application Potential of Arsenic-Resistant Bacteria for Bioremediation in Rhizosphere: A Review
    Ivy Mallick, Ekramul Islam, Samir Kumar Mukherjee
    Soil and Sediment Contamination: An International Journal.2015; 24(6): 704.     CrossRef
  • Proteomic analysis of canola root inoculated with bacteria under salt stress
    Farzad Banaei-Asl, Ali Bandehagh, Ebrahim Dorani Uliaei, Davoud Farajzadeh, Katsumi Sakata, Ghazala Mustafa, Setsuko Komatsu
    Journal of Proteomics.2015; 124: 88.     CrossRef
  • Niches, Population Structure and Genome Reduction in Ochrobactrum intermedium: Clues to Technology-Driven Emergence of Pathogens
    Fabien Aujoulat, Sara Romano-Bertrand, Agnès Masnou, Hélène Marchandin, Estelle Jumas-Bilak, Edgardo Moreno
    PLoS ONE.2014; 9(1): e83376.     CrossRef
  • Brevibacillus sp. KUMAs2, a bacterial isolate for possible bioremediation of arsenic in rhizosphere
    Ivy Mallick, Sk. Tofajjen Hossain, Sangram Sinha, Samir Kumar Mukherjee
    Ecotoxicology and Environmental Safety.2014; 107: 236.     CrossRef
  • Culturable Heavy Metal-Resistant and Plant Growth Promoting Bacteria in V-Ti Magnetite Mine Tailing Soil from Panzhihua, China
    Xiumei Yu, Yanmei Li, Chu Zhang, Huiying Liu, Jin Liu, Wenwen Zheng, Xia Kang, Xuejun Leng, Ke Zhao, Yunfu Gu, Xiaoping Zhang, Quanju Xiang, Qiang Chen, Andrew C. Singer
    PLoS ONE.2014; 9(9): e106618.     CrossRef
Diversity of Endophytic Bacteria in Ginseng and Their Potential for Plant Growth Promotion
Regupathy Thamizh Vendan , Young Joon Yu , Sun Hee Lee , Young Ha Rhee
J. Microbiol. 2010;48(5):559-565.   Published online November 3, 2010
DOI: https://doi.org/10.1007/s12275-010-0082-1
  • 402 View
  • 0 Download
  • 127 Crossref
AbstractAbstract PDF
Endophytic bacteria have been found in virtually every plant studied, where they colonize the internal tissues of their host plant and can form a range of different beneficial relationships. The diversity of bacterial endophytes associated with ginseng plants of varying age levels in Korea was investigated. Fifty-one colonies were isolated from the interior of ginseng stems. Although a mixed composition of endophyte communities was recovered from ginseng based on the results of 16S rDNA analysis, bacteria of the genus Bacillus and Staphylococcus dominated in 1-year-old and 4-year-old plants, respectively. Phylogenetic analysis revealed four clusters: Firmicutes, Actinobacteria, α-Proteobacteria, and γ-Proteobacteria, with Firmicutes being predominant. To evaluate the plant growth promoting activities, 18 representative isolates were selected. Amplification of nifH gene confirmed the presence of diazotrophy in only two isolates. Half of the isolates solubilized mineral phosphate. Except four, all the other endophytic isolates produced significant amounts of indole acetic acid in nutrient broth. Iron sequestering siderophore production was detected in seven isolates. Isolates E-I-3 (Bacillus megaterium), E-I-4 (Micrococcus luteus), E-I-8 (B. cereus), and E-I-20 (Lysinibacillus fusiformis) were positive for most of the plant growth promoting traits, indicating their role in growth promotion of ginseng.

Citations

Citations to this article as recorded by  
  • Microbiome and Metabolome Illustrate the Correlations Between Endophytes and Flavor Metabolites in Passiflora ligularis Fruit Juice
    Meijun Qi, Xuedong Shi, Wenlong Huang, Qilong Wei, Zhenwei Zhang, Rongqi Zhang, Shilang Dong, Sumera Anwar, Hafiz Faiq Bakhat, Butian Wang, Yu Ge
    International Journal of Molecular Sciences.2025; 26(5): 2151.     CrossRef
  • Coating Seeds with Paenibacillus polymyxa ZF129 Microcapsule Suspension Enhanced Control Effect on Fusarium Root Rot and Promoted Seedling Growth in Cucumber
    Jiayi Ma, Jialin Liu, Yanxia Shi, Xuewen Xie, Ali Chai, Sheng Xiang, Xianhua Sun, Lei Li, Baoju Li, Tengfei Fan
    Biology.2025; 14(4): 375.     CrossRef
  • Correlation Analysis Between the Growth of Wild-Simulated Ginseng and the Soil Bacterial Community in the Central Region of South Korea
    Kiyoon Kim, Yeong-Bae Yun, Myeongbin Park, Yurry Um
    Applied Sciences.2025; 15(7): 3465.     CrossRef
  • Characterization of phosphate solubilizing rhizobacteria Lysinibacillus boronitolerans PSLR2
    Sharon Maria Jacob, Srilakshmi Lelapalli, Sripriya Paranthaman
    Vegetos.2025;[Epub]     CrossRef
  • Characterization of PGPR from rhizospheric soil of some vegetable crops cultivated at Sylhet district of Bangladesh
    Saima Sadia Jui, Rakibul Hasan, Israt Jahan Ema, Hasan Tareq Nasim, Md. Monirul Islam
    International Journal of Agriculture Environment and Food Sciences.2025; 9(1): 132.     CrossRef
  • Bacillus subtilis ge28, a potential biocontrol agent for controlling rust rot in Panax ginseng caused by Cylindrocarpon destructans
    Yuan Gao, Junchi Wang, Shan Zhong, Rong Wang, Jianhe Wei, Wanlong Ding, Yong Li
    Medicinal Plant Biology.2025;[Epub]     CrossRef
  • Potential participants and regulatory factors in ginsenoside biosynthesis of Panax ginseng C.A. Meyer: The role of endophytic fungus PBF-08
    Jinghui Yu, Dinghui Wang, Tiantian Zhao, Xiaochen Yu, Sizhang Liu, Yanfang Wang, Kangyu Wang, Mingzhu Zhao, Ping Chen, Yi Wang, Meiping Zhang
    Plant Science.2025; 358: 112553.     CrossRef
  • Ancient bayberry increased stress resistance by enriching tissue‐specific microbiome and metabolites
    Gang Li, Zhenshuo Wang, Haiying Ren, Xingjiang Qi, Hao Han, Xiangyang Ding, Li Sun, Rahila Hafeez, Qi Wang, Bin Li
    Physiologia Plantarum.2024;[Epub]     CrossRef
  • Comparative physiological and transcriptomic analyses provide induction resistance mechanisms of Bacillus tequilensis against Colletotrichum fructicola in Camellia oleifera
    Aiting Zhou, Junrong Tang, Qianjie Du, Jia Deng, Jianrong Wu, Huancheng Ma, Fang Wang
    Plant Physiology and Biochemistry.2024; 214: 108912.     CrossRef
  • Temporal patterns of endophytic microbial heterogeneity across distinct ecological compartments within the Panax ginseng root system following deforestation for cultivation
    Zhenting Shi, Limin Yang, Meiling Yang, Kexin Li, Li Yang, Mei Han
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • Comparative Genome Analyses Provide Insight into the Antimicrobial Activity of Endophytic Burkholderia
    Jiayuan Jia, Shi-En Lu
    Microorganisms.2024; 12(1): 100.     CrossRef
  • The utilization of Lysinibacillus bacterial powder to induce Fe plaque formation mitigates cadmium and chromium levels in rice
    Qing Xu, Yuxiao Zhang, Ruijia Yang, Jinfang Li, Jiongxi Chen, Jingyi Wang, Gejiao Wang, Mingshun Li, Kaixiang Shi
    Journal of Hazardous Materials.2024; 463: 132825.     CrossRef
  • Plant endophytes: unveiling hidden applications toward agro-environment sustainability
    Rajeshwari Negi, Babita Sharma, Sanjeev Kumar, Kundan Kumar Chaubey, Tanvir Kaur, Rubee Devi, Ashok Yadav, Divjot Kour, Ajar Nath Yadav
    Folia Microbiologica.2024; 69(1): 181.     CrossRef
  • Effects of a co-bacterial agent on the growth, disease control, and quality of ginseng based on rhizosphere microbial diversity
    Xinyue Li, Qun Liu, Yugang Gao, Pu Zang, Tong Zheng
    BMC Plant Biology.2024;[Epub]     CrossRef
  • Temporal heterogeneity of the root microbiome in Panax ginseng soils across ecological compartments under mild soil disturbance
    Zhenting Shi, Limin Yang, Meiling Yang, Kexin Li, Li Yang, Mei Han
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • Isolation of endophytes from Dioscorea nipponica Makino for stimulating diosgenin production and plant growth
    Shangni Dang, Jiang Geng, Ran Wang, Yumei Feng, Youzhi Han, Runmei Gao
    Plant Cell Reports.2024;[Epub]     CrossRef
  • Lysinibacillus pinottii sp. nov., a novel species with anti-mosquito and anti-mollusk activity
    Christopher A. Dunlap, Eric T. Johnson, Marleny Burkett-Cadena, Johanna Cadena, Ephantus J. Muturi
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Evaluating Native Bacillus Strains as Potential Biocontrol Agents against Tea Anthracnose Caused by Colletotrichum fructicola
    Meixia Chen, Hui Lin, Weifan Zu, Lulu Wang, Wenbo Dai, Yulin Xiao, Ye Zou, Chengkang Zhang, Wei Liu, Xiaoping Niu
    Plants.2024; 13(20): 2889.     CrossRef
  • Genomics- and Transcriptomics-Guided Discovery of Clavatols from Arctic Fungi Penicillium sp. MYA5
    Yuan-Yuan Sun, Bo Hu, Hao-Bing Yu, Jing Zhou, Xian-Chao Meng, Zhe Ning, Jin-Feng Ding, Ming-Hui Cui, Xiao-Yu Liu
    Marine Drugs.2024; 22(6): 236.     CrossRef
  • An endophytic Paenibacillus polymyxa hg18 and its biocontrol potential against Fusarium oxysporum f. sp. cucumerinum
    Fengfeng Cai, Chengde Yang, Ting Ma, Richard osei, Mengjun Jin, Cuiwen Zhang, Yidan Wang
    Biological Control.2024; 188: 105380.     CrossRef
  • Impact of Growth-Promoting Endophytic Bacteria on Ginger Plant Growth
    Dilfuza Jabborova, Kakhramon Davranov, Zafarjon Jabbarov, Yuriy Enakiev, Tokhtasin Abdrakhmanov, Rahul Datta, Sachidanand Singh, Mohammad Shah Jahan, Sezai Ercisli, Namita Singh
    Indian Journal of Microbiology.2024;[Epub]     CrossRef
  • Relationships between endophytic bacteria and medicinal plants on bioactive compounds production
    Thanh-Dung Nguyen, Thi-Tho Nguyen, Minh-Nhut Pham, Huu-Nghia Duong, Thuy-Trang Pham, Thi-Pha Nguyen, Phu-Tho Nguyen, To-Uyen Thi Nguyen, Huu-Hiep Nguyen, Huu-Thanh Nguyen
    Rhizosphere.2023; 27: 100720.     CrossRef
  • Endophytic Bacteria Isolated from Tea Leaves (Camellia sinensis var. assamica) Enhanced Plant-Growth-Promoting Activity
    Md. Humayun Kabir, Kridsada Unban, Pratthana Kodchasee, Rasiravathanahalli Kaveriyappan Govindarajan, Saisamorn Lumyong, Nakarin Suwannarach, Pairote Wongputtisin, Kalidas Shetty, Chartchai Khanongnuch
    Agriculture.2023; 13(3): 533.     CrossRef
  • A microecological research reveals seasonal variation in rhizosphere-endophytic bacteria and growth and development of Codonopsis pilosula root
    Feifan Leng, Bo Zhang, Xinqiang Zhu, Zhiqiang Kong, Xiaoli Wang, Yonggang Wang
    Rhizosphere.2023; 28: 100805.     CrossRef
  • Plants and endophytes interaction: a “secret wedlock” for sustainable biosynthesis of pharmaceutically important secondary metabolites
    Poonam Kumari, Nikky Deepa, Prabodh Kumar Trivedi, Brajesh K. Singh, Vaibhav Srivastava, Akanksha Singh
    Microbial Cell Factories.2023;[Epub]     CrossRef
  • Lysinibacillus spp.: an IAA-producing endospore forming-bacteria that promotes plant growth
    Manuel Pantoja-Guerra, Marleny Burkett-Cadena, Johanna Cadena, Christopher A. Dunlap, Camilo A. Ramírez
    Antonie van Leeuwenhoek.2023; 116(7): 615.     CrossRef
  • Antagonistic Activity and Potential Mechanisms of Endophytic Bacillus subtilis YL13 in Biocontrol of Camellia oleifera Anthracnose
    Yandong Xia, Junang Liu, Zhikai Wang, Yuan He, Qian Tan, Zhuang Du, Anqi Niu, Manman Liu, Zhong Li, Mengke Sang, Guoying Zhou
    Forests.2023; 14(5): 886.     CrossRef
  • Endophytic Bacteria; Diversity, Characterization and Role in Agriculture
    Hanaa A. Abo-Koura
    Journal of Basic & Applied Sciences.2023; 19: 116.     CrossRef
  • Rice endophytic communities are strongly dependent on microbial communities specific to each soil
    Solomon Oloruntoba Samuel, Kazuki Suzuki, Rasit Asiloglu, Naoki Harada
    Biology and Fertility of Soils.2023; 59(7): 733.     CrossRef
  • Characterization of Weizmannia ginsengihumi LGHNH from Wild-Ginseng and Anti-Aging Effects of Its Cultured Product
    Minjung Kwon, Hyejin Lee, So Young Lee, Mu Hyun Jin
    Microbiology and Biotechnology Letters.2022; 50(3): 414.     CrossRef
  • Occidiofungin Is the Key Metabolite for Antifungal Activity of the Endophytic Bacterium Burkholderia sp. MS455 Against Aspergillus flavus
    Jiayuan Jia, Emerald Ford, Sarah M. Hobbs, Sonya M. Baird, Shi-En Lu
    Phytopathology®.2022; 112(3): 481.     CrossRef
  • Diversity and Bioactivity of Endophytic Actinobacteria Associated with Grapevines
    Patanun Kanjanamaneesathian, Anish Shah, Hayley Ridgway, E. Eirian Jones
    Current Microbiology.2022;[Epub]     CrossRef
  • Prospecting potential of endophytes for modulation of biosynthesis of therapeutic bioactive secondary metabolites and plant growth promotion of medicinal and aromatic plants
    Devendra Singh, Shobit Thapa, Himanshu Mahawar, Dharmendra Kumar, Neelam Geat, S. K. Singh
    Antonie van Leeuwenhoek.2022; 115(6): 699.     CrossRef
  • Plant-Growth-Promoting Potential of PGPE Isolated from Dactylis glomerata L.
    Chaowen Zhang, Kai Cai, Mengyuan Li, Jiaqi Zheng, Yuzhu Han
    Microorganisms.2022; 10(4): 731.     CrossRef
  • Seed inhabiting bacterial endophytes of maize promote seedling establishment and provide protection against fungal disease
    Gaurav Pal, Kanchan Kumar, Anand Verma, Satish Kumar Verma
    Microbiological Research.2022; 255: 126926.     CrossRef
  • Diversity of epiphytic bacterial communities on male and female Sargassum thunbergii
    Jing Wang, Zhibo Yang, Gaoge Wang, Shuai Shang, Xuexi Tang, Hui Xiao
    AMB Express.2022;[Epub]     CrossRef
  • Characterization of the Cultivable Endophytic Bacterial Community of Seeds and Sprouts of Cannabis sativa L. and Perspectives for the Application as Biostimulants
    Morena Gabriele, Francesco Vitali, Elisa Chelucci, Carolina Chiellini
    Microorganisms.2022; 10(9): 1742.     CrossRef
  • Bacterial Endophytes Contribute to Rice Seedling Establishment Under Submergence
    Germán Darío Ahumada, Eva María Gómez-Álvarez, Matteo Dell’Acqua, Iris Bertani, Vittorio Venturi, Pierdomenico Perata, Chiara Pucciariello
    Frontiers in Plant Science.2022;[Epub]     CrossRef
  • Antifungal action and induction of resistance by Bacillus sp. strain YYC 155 against Colletotrichum fructicola for control of anthracnose disease in Camellia oleifera
    Aiting Zhou, Fang Wang, Jiabi Yin, Ruiqi Peng, Jia Deng, Dezhou Shen, Jianrong Wu, Xiaoyun Liu, Huancheng Ma
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Effects of cultivation soils and ages on microbiome in the rhizosphere soil of Panax ginseng
    Chao He, Rong Wang, Wanlong Ding, Yong Li
    Applied Soil Ecology.2022; 174: 104397.     CrossRef
  • Wild Panax plants adapt to their thermal environment by harboring abundant beneficial seed endophytic bacteria
    Dong Liu, Liang Lin, Tie Zhang, Qian Xu, Mulan Wang, Minghai Gao, Parag Bhople, Hugh W. Pritchard, Xiangyun Yang, Fuqiang Yu
    Frontiers in Ecology and Evolution.2022;[Epub]     CrossRef
  • The Endosphere Microbiome of Ginseng
    Paul H. Goodwin
    Plants.2022; 11(3): 415.     CrossRef
  • Characterization of root endophytic Paenibacillus polymyxa isolates with biocontrol activity against Xanthomonas translucens and Fusarium graminearum
    Elaheh Taheri, Saeed Tarighi, Parissa Taheri
    Biological Control.2022; 174: 105031.     CrossRef
  • Lysinibacilli: A Biological Factories Intended for Bio-Insecticidal, Bio-Control, and Bioremediation Activities
    Qazi Mohammad Sajid Jamal, Varish Ahmad
    Journal of Fungi.2022; 8(12): 1288.     CrossRef
  • Lysinibacillus xylanilyticus Strain GIC41 as a Potential Plant Biostimulant
    Nusrat Ahsan, Malek Marian, Haruhisa Suga, Masafumi Shimizu
    Microbes and Environments.2021; 36(4): n/a.     CrossRef
  • Efficiency of the Hydroponic System as an Approach to Confirm the Solubilization of CaHPO4 by Microbial Strains Using Glycine max as a Model
    Mateus Neri Oliveira Reis, Layara Alexandre Bessa, Andressa Pereira de Jesus, Fabiano Guimarães Silva, Marialva Alvarenga Moreira, Luciana Cristina Vitorino
    Frontiers in Plant Science.2021;[Epub]     CrossRef
  • Multiple Plant Growth-Promotion Traits in Endophytic Bacteria Retrieved in the Vegetative Stage From Passionflower
    Luis Gabriel Cueva-Yesquén, Marcela Cristina Goulart, Derlene Attili de Angelis, Marcos Nopper Alves, Fabiana Fantinatti-Garboggini
    Frontiers in Plant Science.2021;[Epub]     CrossRef
  • Search for antagonists to protect plant raw materials from pathogens
    L R Valiullin, V Y Titova, E V Skvortsov, R S Muhammadiev, S Z Validov, V Y Rud, V.V. Davydov, A P Glinushkin
    IOP Conference Series: Earth and Environmental Science.2021; 663(1): 012005.     CrossRef
  • Bioprospecting of endophytic bacteria from nodules and roots of Vigna radiata, Vigna unguiculata and Cajanus cajan for their potential use as bioinoculants
    Namita Bhutani, Rajat Maheshwari, Pradeep Kumar, Pooja Suneja
    Plant Gene.2021; 28: 100326.     CrossRef
  • Biotransformation of ginsenoside Rc to Rd by endophytic bacterium Bacillus sp. G9y isolated from Panax quinquefolius
    Chen Zhang, Yanyan Xu, Mengmeng Gu, Zhenzhen Liu, Jingyuan Zhang, Qi Zeng, Daheng Zhu
    Antonie van Leeuwenhoek.2021; 114(4): 437.     CrossRef
  • Plant Growth-Promoting Endophytic Bacterial Community Inhabiting the Leaves of Pulicaria incisa (Lam.) DC Inherent to Arid Regions
    Amr Fouda, Ahmed M. Eid, Albaraa Elsaied, Ehab F. El-Belely, Mohammed G. Barghoth, Ehab Azab, Adil A. Gobouri, Saad El-Din Hassan
    Plants.2021; 10(1): 76.     CrossRef
  • Community Analysis-based Screening of Plant Growth-promoting Bacteria for Sugar Beet
    Kazuyuki Okazaki, Hirohito Tsurumaru, Megumi Hashimoto, Hiroyuki Takahashi, Takashi Okubo, Takuji Ohwada, Kiwamu Minamisawa, Seishi Ikeda
    Microbes and Environments.2021; 36(2): n/a.     CrossRef
  • Characterization of Lysinibacillus fusiformis strain S4C11: In vitro, in planta, and in silico analyses reveal a plant-beneficial microbe
    Alessandro Passera, Marzia Rossato, John S. Oliver, Giovanna Battelli, Gul-I-Rayna Shahzad, Emanuela Cosentino, Jay M. Sage, Silvia L. Toffolatti, Giulia Lopatriello, Jennifer R. Davis, Michael D. Kaiser, Massimo Delledonne, Paola Casati
    Microbiological Research.2021; 244: 126665.     CrossRef
  • Lysinibacillus Species: Their Potential as Effective Bioremediation, Biostimulant, and Biocontrol Agents
    Nusrat Ahsan, Masafumi Shimizu
    Reviews in Agricultural Science.2021; 9: 103.     CrossRef
  • Endophytic bacterial communities and spatiotemporal variations in cotton roots in Xinjiang, China
    YingWu Shi, HongMei Yang, Ming Chu, XinXiang Niu, XiangDong Huo, Yan Gao, Qing Lin, Jun Zeng, Tao Zhang, Kai Lou
    Canadian Journal of Microbiology.2021; 67(7): 506.     CrossRef
  • Endophytes from Panax species
    Rufin Marie Kouipou Toghueo, Diane Yimta Youmbi, Fabrice Fekam Boyom
    Biocatalysis and Agricultural Biotechnology.2021; 31: 101882.     CrossRef
  • Beneficial Relationships Between Endophytic Bacteria and Medicinal Plants
    Wei Wu, Wenhua Chen, Shiyu Liu, Jianjun Wu, Yeting Zhu, Luping Qin, Bo Zhu
    Frontiers in Plant Science.2021;[Epub]     CrossRef
  • Harnessing Bacterial Endophytes for Promotion of Plant Growth and Biotechnological Applications: An Overview
    Ahmed M. Eid, Amr Fouda, Mohamed Ali Abdel-Rahman, Salem S. Salem, Albaraa Elsaied, Ralf Oelmüller, Mohamed Hijri, Arnab Bhowmik, Amr Elkelish, Saad El-Din Hassan
    Plants.2021; 10(5): 935.     CrossRef
  • Biotechnological potential of endophytic bacteria of bamboo Guadua sp. for promotion of growth of micropropagated yam plants (Dioscorea rotundata Poir)
    Sonia Maria Lima Santos do Vale, Amauri Siviero, Lauro Saraiva Lessa, Eduardo Pacca Luna Mattar, Paulo Arthur Almeida do Vale
    AIMS Agriculture and Food.2020; 5(4): 850.     CrossRef
  • Characterization of endophytic bacterial communities within greenhouse and field-grown rhizomes of three rare pitcher plant species (Sarracenia oreophila, S. leucophylla, and S. purpurea spp. venosa) with an emphasis on nitrogen-fixing bacteria
    W. K. Sexton, M. Fidero, J. C. Spain, L. Jiang, K. Bucalo, J. M. Cruse-Sanders, G. S. Pullman
    Plant and Soil.2020; 447(1-2): 257.     CrossRef
  • Isolation and identification of endophytic fungi in walnut
    Xiaoyue Wang, Kehang Li, Mengmeng Han, Wenyu Zhang, Xiaoyan Li, Dongshuo Ma, Fang Wang, Meixia Pang, Jinghua Qi
    IOP Conference Series: Earth and Environmental Science.2020; 508(1): 012138.     CrossRef
  • The invisible life inside plants: Deciphering the riddles of endophytic bacterial diversity
    Jakub Papik, Magdalena Folkmanova, Marketa Polivkova-Majorova, Jachym Suman, Ondrej Uhlik
    Biotechnology Advances.2020; 44: 107614.     CrossRef
  • Seasonal Variation Influence Endophytic Actinobacterial Communities of Medicinal Plants from Tropical Deciduous Forest of Meghalaya and Characterization of Their Plant Growth-Promoting Potentials
    Dina Barman, Mamtaj S. Dkhar
    Current Microbiology.2020; 77(8): 1689.     CrossRef
  • Evolutionary insights into adaptation of Staphylococcus haemolyticus to human and non-human niches
    Vasvi Chaudhry, Prabhu B. Patil
    Genomics.2020; 112(2): 2052.     CrossRef
  • Soil nutrition, microbial composition and associated soil enzyme activities in KwaZulu-Natal grasslands and savannah ecosystems soils
    Ntuthuko S. Zungu, Samson O. Egbewale, Ademola O. Olaniran, María Pérez-Fernández, Anathi Magadlela
    Applied Soil Ecology.2020; 155: 103663.     CrossRef
  • Characterization of bacterial communities associated with the exotic and heavy metal tolerant wetland plant Spartina alterniflora
    Ying Yang, Jian Ding, Yulang Chi, Jianjun Yuan
    Scientific Reports.2020;[Epub]     CrossRef
  • The Effect of Auxin and Auxin-Producing Bacteria on the Growth, Essential Oil Yield, and Composition in Medicinal and Aromatic Plants
    Ramazan Çakmakçı, Goltay Mosber, Ada Hazal Milton, Fırat Alatürk, Baboo Ali
    Current Microbiology.2020; 77(4): 564.     CrossRef
  • Kaya fosfat ve TSP gübresi ile uygulanan Micrococcus luteus AR-72'nin toprağın bazı biyolojik özellikleri, NO3 ve alınabilir P içeriğine etkisi
    Betül BAYRAKLI
    Toprak Bilimi ve Bitki Besleme Dergisi.2020; 8(2): 157.     CrossRef
  • Lysinibacillus capsici sp. nov, isolated from the rhizosphere of a pepper plant
    Marleny Burkett-Cadena, Leonardo Sastoque, Johanna Cadena, Christopher A. Dunlap
    Antonie van Leeuwenhoek.2019; 112(8): 1161.     CrossRef
  • Endophytic Bacteria in Plant Salt Stress Tolerance: Current and Future Prospects
    Anukool Vaishnav, Awadhesh K. Shukla, Anjney Sharma, Roshan Kumar, Devendra K. Choudhary
    Journal of Plant Growth Regulation.2019; 38(2): 650.     CrossRef
  • Metagenomic analysis of bacterial endophyte community structure and functions in Panax ginseng at different ages
    Chi Eun Hong, Jang Uk Kim, Jung Woo Lee, Kyong Hwan Bang, Ick Hyun Jo
    3 Biotech.2019;[Epub]     CrossRef
  • Foliar Application of Iron Fortified Bacteriosiderophore Improves Growth and Grain Fe Concentration in Wheat and Soybean
    Sandeep Sharma, Subhash Chandra, Arun Kumar, Prem Bindraban, Anil Kumar Saxena, Veena Pande, Renu Pandey
    Indian Journal of Microbiology.2019; 59(3): 344.     CrossRef
  • Associative diazotrophic bacteria from forage grasses in the Brazilian semi-arid region are effective plant growth promoters
    Gabiane dos Reis Antunes, Sheilla Rios Assis Santana, Indra Elena Costa Escobar, Marivaine da Silva Brasil, Gherman Garcia Leal de Araújo, Tadeu Vinhas Voltolini, Paulo Ivan Fernandes-Júnior
    Crop and Pasture Science.2019; 70(10): 899.     CrossRef
  • Exploring Actinobacteria Associated With Rhizosphere and Endosphere of the Native Alpine Medicinal Plant Leontopodium nivale Subspecies alpinum
    Martina Oberhofer, Jaqueline Hess, Marlene Leutgeb, Florian Gössnitzer, Thomas Rattei, Christoph Wawrosch, Sergey B. Zotchev
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Plant growth promoting bacteria increases biomass, effective constituent, and modifies rhizosphere bacterial communities of Panax ginseng
    Wenxiu Ji, Xue Leng, Zhengxun Jin, Hulin Li
    Acta Agriculturae Scandinavica, Section B — Soil & Plant Science.2019; 69(2): 135.     CrossRef
  • Culturable endophytic bacteria ofCamelliaspecies endowed with plant growth promoting characteristics
    A. Borah, R. Das, R. Mazumdar, D. Thakur
    Journal of Applied Microbiology.2019; 127(3): 825.     CrossRef
  • Separating and Purifying of Endophytic Fungi from Ginkgo Biloba and Screening of Flavonoid-Producing Strains
    X.Y. Zhang, X. Li, M.M. Han, Z.Y. Cai, X. Gao, M.X. Pang, J.H. Qi, F. Wang
    IOP Conference Series: Earth and Environmental Science.2019; 371(4): 042052.     CrossRef
  • Functional diversity of cultivable endophytes from Cicer arietinum and Pisum sativum: Bioprospecting their plant growth potential
    Rajat Maheshwari, Namita Bhutani, Anuradha Bhardwaj, Pooja Suneja
    Biocatalysis and Agricultural Biotechnology.2019; 20: 101229.     CrossRef
  • Lysinibacillus sphaericusas a Nutrient Enhancer during Fire-Impacted Soil Replantation
    A. M. Aguirre-Monroy, J. C. Santana-Martínez, J. Dussán
    Applied and Environmental Soil Science.2019; 2019: 1.     CrossRef
  • Comparison of specific endophytic bacterial communities in different developmental stages of Passiflora incarnata using culture‐dependent and culture‐independent analysis
    Marcela C. Goulart, Luis G. Cueva‐Yesquén, Kelly J. Hidalgo Martinez, Derlene Attili‐Angelis, Fabiana Fantinatti‐Garboggini
    MicrobiologyOpen.2019;[Epub]     CrossRef
  • Diversity and antifungal activity of endophytic bacteria associated with Panax ginseng seedlings
    Chi Eun Hong, Sung Hee Jo, Ick-Hyun Jo, Jeong Mee Park
    Plant Biotechnology Reports.2018; 12(6): 409.     CrossRef
  • Isolation and identification of endophytic diazotrophs from lodgepole pine trees growing at unreclaimed gravel mining pits in central interior British Columbia, Canada
    Kiran Preet Padda, Akshit Puri, Chris P. Chanway
    Canadian Journal of Forest Research.2018; 48(12): 1601.     CrossRef
  • Bacterial endophytes isolated from mountain-cultivated ginseng (Panax ginseng Mayer) have biocontrol potential against ginseng pathogens
    MD. Emran Khan Chowdhury, Hanhong Bae
    Biological Control.2018; 126: 97.     CrossRef
  • Isolation and identification of bacterial endophytes from Crinum macowanii Baker
    F. Morare Rebotiloe, Ubomba-Jaswa Eunice, H. Serepa-Dlamini Mahloro
    African Journal of Biotechnology.2018; 17(33): 1040.     CrossRef
  • Diversity of bacterial endophytes in Panax ginseng and their protective effects against pathogens
    Chi Eun Hong, Jang Uk Kim, Jung Woo Lee, Sung Woo Lee, Ick-Hyun Jo
    3 Biotech.2018;[Epub]     CrossRef
  • Analysis of Medium-Chain-Length Polyhydroxyalkanoate-Producing Bacteria in Activated Sludge Samples Enriched by Aerobic Periodic Feeding
    Sun Hee Lee, Jae Hee Kim, Chung-Wook Chung, Do Young Kim, Young Ha Rhee
    Microbial Ecology.2018; 75(3): 720.     CrossRef
  • Extensive Overlap of Tropical Rainforest Bacterial Endophytes between Soil, Plant Parts, and Plant Species
    Emmanuel Haruna, Noraziah M. Zin, Dorsaf Kerfahi, Jonathan M. Adams
    Microbial Ecology.2018; 75(1): 88.     CrossRef
  • Diversity of commensal bacteria from mid-gut of pink stem borer (Sesamia inferens [Walker])-Lepidoptera insect populations of India
    B. Motcha Anthony Reetha, M. Mohan
    Journal of Asia-Pacific Entomology.2018; 21(3): 937.     CrossRef
  • The seed endosphere of Anadenanthera colubrina is inhabited by a complex microbiota, including Methylobacteriumspp. and Staphylococcus spp. with potential plant-growth promoting activities
    Pasquale Alibrandi, Massimiliano Cardinale, MD Mahafizur Rahman, Francesco Strati, Paolo Ciná, Marta L. de Viana, Eugenia M. Giamminola, Giuseppe Gallo, Sylvia Schnell, Carlotta De Filippo, Mirella Ciaccio, Anna Maria Puglia
    Plant and Soil.2018; 422(1-2): 81.     CrossRef
  • Corn sap bacterial endophytes and their potential in plant growth-promotion
    Shimaila Ali, Joshua Isaacson, Yulia Kroner, Soledad Saldias, Saveetha Kandasamy, George Lazarovits
    Environmental Sustainability.2018; 1(4): 341.     CrossRef
  • Diversity and composition of rhizospheric soil and root endogenous bacteria in Panax notoginseng during continuous cropping practices
    Yong Tan, Yinshan Cui, Haoyu Li, Anxiu Kuang, Xiaoran Li, Yunlin Wei, Xiuling JI
    Journal of Basic Microbiology.2017; 57(4): 337.     CrossRef
  • Revealing topics and their evolution in biomedical literature using Bio-DTM: a case study of ginseng
    Qian Chen, Ni Ai, Jie Liao, Xin Shao, Yufeng Liu, Xiaohui Fan
    Chinese Medicine.2017;[Epub]     CrossRef
  • Effects of two new siderophore-producing rhizobacteria on growth and iron content of maize and canola plants
    Nazanin Ghavami, Hossein Ali Alikhani, Ahmad Ali Pourbabaei, Hossein Besharati
    Journal of Plant Nutrition.2017; 40(5): 736.     CrossRef
  • Prevalence of Bacillus in the interior tissues of Monsonia burkeana and other medicinal plants in South Africa
    L.R. Nnzeru, K. Ntushelo, F.N. Mudau
    South African Journal of Botany.2017; 113: 19.     CrossRef
  • Molecular Basis of Endophytic Bacillus megaterium-induced Growth Promotion in Arabidopsis thaliana: Revelation by Microarray-based Gene Expression Analysis
    Munjal Vibhuti, A. Kumar, Neelam Sheoran, Agisha Valiya Nadakkakath, Santhosh J. Eapen
    Journal of Plant Growth Regulation.2017; 36(1): 118.     CrossRef
  • Plant growth-promoting activities for bacterial and fungal endophytes isolated from medicinal plant of Teucrium polium L.
    Saad El-Din Hassan
    Journal of Advanced Research.2017; 8(6): 687.     CrossRef
  • Composition, diversity and bioactivity of culturable bacterial endophytes in mountain-cultivated ginseng in Korea
    MD. Emran Khan Chowdhury, Junhyun Jeon, Soon Ok Rim, Young-Hwan Park, Seung Kyu Lee, Hanhong Bae
    Scientific Reports.2017;[Epub]     CrossRef
  • Endophytes of Jatropha curcas promote growth of maize
    Santosh Ranjan Mohanty, Garima Dubey, Bharati Kollah
    Rhizosphere.2017; 3: 20.     CrossRef
  • Diversity of bacterial endophytes in 3 and 15 year-old grapevines of Vitis vinifera cv. Corvina and their potential for plant growth promotion and phytopathogen control
    Marco Andreolli, Silvia Lampis, Giacomo Zapparoli, Elisa Angelini, Giovanni Vallini
    Microbiological Research.2016; 183: 42.     CrossRef
  • Genotyping and identification of broad spectrum antimicrobial volatiles in black pepper root endophytic biocontrol agent, Bacillus megaterium BP17
    Vibhuti Munjal, Agisha Valiya Nadakkakath, Neelam Sheoran, Aditi Kundu, Vibina Venugopal, Kesavan Subaharan, Suseelabhai Rajamma, Santhosh J. Eapen, Aundy Kumar
    Biological Control.2016; 92: 66.     CrossRef
  • Endophytic culturable bacteria colonizing Lavandula dentata L. plants: Isolation, characterization and evaluation of their plant growth-promoting activities
    S.I.A. Pereira, C. Monteiro, A.L. Vega, P.M.L. Castro
    Ecological Engineering.2016; 87: 91.     CrossRef
  • Endophytic microorganisms from Bauhinia monandra leaves: Isolation, antimicrobial activities and interaction with galactose-specific lectin BmoLL
    A F Ramos S, C N Silva L, T S Correia M, M Ara uacute jo J, C B B Coelho L
    African Journal of Microbiology Research.2016; 10(17): 600.     CrossRef
  • Enhanced biological phosphorus removal in aerated stirred tank reactor using aerobic bacterial consortium
    Dharmender Yadav, Vikas Pruthi, Pramod Kumar
    Journal of Water Process Engineering.2016; 13: 61.     CrossRef
  • Biological Control Activities of Rice-Associated Bacillus sp. Strains against Sheath Blight and Bacterial Panicle Blight of Rice
    Bishnu K. Shrestha, Hari Sharan Karki, Donald E. Groth, Nootjarin Jungkhun, Jong Hyun Ham, Adam Driks
    PLOS ONE.2016; 11(1): e0146764.     CrossRef
  • Genomic investigation reveals evolution and lifestyle adaptation of endophytic Staphylococcus epidermidis
    Vasvi Chaudhry, Prabhu B. Patil
    Scientific Reports.2016;[Epub]     CrossRef
  • The diversity and potential function of endophytic bacteria isolated from Kobreasia capillifolia at alpine grasslands on the Tibetan Plateau, China
    Ying WANG, Cheng-de YANG, Yu-ling YAO, Yu-qin WANG, Zhen-fen ZHANG, Li XUE
    Journal of Integrative Agriculture.2016; 15(9): 2153.     CrossRef
  • Influences of Plant Species, Season and Location on Leaf Endophytic Bacterial Communities of Non-Cultivated Plants
    Tao Ding, Ulrich Melcher, Lorenzo Brusetti
    PLOS ONE.2016; 11(3): e0150895.     CrossRef
  • An endophytic bacterium isolated from Panax ginseng C.A. Meyer enhances growth, reduces morbidity, and stimulates ginsenoside biosynthesis
    Yugang Gao, Qun Liu, Pu Zang, Xue Li, Qing Ji, Zhongmei He, Yan Zhao, He Yang, Xueliang Zhao, Lianxue Zhang
    Phytochemistry Letters.2015; 11: 132.     CrossRef
  • Determination of ginsenosides by Bacillus polymyxa conversion and evaluation on pharmacological activities of the conversion products
    Qing Ji, Yugang Gao, Yan Zhao, Zhongmei He, Pu Zang, Hongyan Zhu, He Yang, Xue Li, Lianxue Zhang
    Process Biochemistry.2015; 50(6): 1016.     CrossRef
  • Involvement of soil bacteria in ABO blood mistyping
    Naoki Takada, Chikahiro Mori, Rie Takai, Tomohiro Takayama, Yoshihisa Watanabe, Kohei Nakamura, Kazuhiro Takamizawa
    Legal Medicine.2015; 17(2): 128.     CrossRef
  • Impact of plant development on the rhizobacterial population of Arachis hypogaea: a multifactorial analysis
    Shyamalina Haldar, Sanghamitra Sengupta
    Journal of Basic Microbiology.2015; 55(7): 922.     CrossRef
  • Biosynthesis of Anisotropic Silver Nanoparticles by Bhargavaea indica and Their Synergistic Effect with Antibiotics against Pathogenic Microorganisms
    Priyanka Singh, Yeon Ju Kim, Hina Singh, Ramya Mathiyalagan, Chao Wang, Deok Chun Yang, An-Ya Lo
    Journal of Nanomaterials.2015;[Epub]     CrossRef
  • Bacterial community compositions of tomato (Lycopersicum esculentum Mill.) seeds and plant growth promoting activity of ACC deaminase producing Bacillus subtilis (HYT-12-1) on tomato seedlings
    Mingshuang Xu, Jiping Sheng, Lin Chen, Yejun Men, Lin Gan, Shuntang Guo, Lin Shen
    World Journal of Microbiology and Biotechnology.2014; 30(3): 835.     CrossRef
  • The phosphotransferase system geneptsIin the endophytic bacteriumBacillus cereusis required for biofilm formation, colonization, and biocontrol against wheat sharp eyespot
    Yu-Bin Xu, Mai Chen, Ying Zhang, Miao Wang, Ying Wang, Qiu-bin Huang, Xue Wang, Gang Wang
    FEMS Microbiology Letters.2014; 354(2): 142.     CrossRef
  • Dynamics of Panax ginseng Rhizospheric Soil Microbial Community and Their Metabolic Function
    Yong Li, YiXin Ying, WanLong Ding, Shilin Chen
    Evidence-Based Complementary and Alternative Medicine.2014;[Epub]     CrossRef
  • Quorum-Sensing Regulation of Constitutive Plantaricin by Lactobacillus plantarum Strains under a Model System for Vegetables and Fruits
    Carlo G. Rizzello, Pasquale Filannino, Raffaella Di Cagno, Maria Calasso, Marco Gobbetti
    Applied and Environmental Microbiology.2014; 80(2): 777.     CrossRef
  • Population and Diversity of Endophytic Bacteria Associated with Medicinal Plant Curcuma zedoaria
    TRI RATNA SULISTIYANI, PUSPITA LISDIYANTI, YULIN LESTARI
    Microbiology Indonesia.2014; 8(2): 65.     CrossRef
  • Endophytic microorganisms—promising applications in bioremediation of greenhouse gases
    Z. Stępniewska, A. Kuźniar
    Applied Microbiology and Biotechnology.2013; 97(22): 9589.     CrossRef
  • Phylogenetic diversity of bacterial endophytes of Panax notoginseng with antagonistic characteristics towards pathogens of root-rot disease complex
    Li Ma, Yong Hong Cao, Ming Hui Cheng, Ying Huang, Ming He Mo, Yong Wang, Jian Zhong Yang, Fa Xiang Yang
    Antonie van Leeuwenhoek.2013; 103(2): 299.     CrossRef
  • Distribution of Endophytic Bacteria in Alopecurus aequalis Sobol and Oxalis corniculata L. from Soils Contaminated by Polycyclic Aromatic Hydrocarbons
    Anping Peng, Juan Liu, Yanzheng Gao, Zeyou Chen, Raffaella Balestrini
    PLoS ONE.2013; 8(12): e83054.     CrossRef
  • Endophytic bacterial diversity in banana 'Prata Anã' (Musa spp.) roots
    Suzane A. Souza, Adelica A. Xavier, Márcia R. Costa, Acleide M.S. Cardoso, Marlon C.T. Pereira, Silvia Nietsche
    Genetics and Molecular Biology.2013; 36(2): 252.     CrossRef
  • Antitumor activity of bacterial exopolysaccharides from the endophyte Bacillus amyloliquefaciens sp. isolated from Ophiopogon japonicus
    YI-TAO CHEN, QIANG YUAN, LE-TIAN SHAN, MEI-AI LIN, DONG-QING CHENG, CHANG-YU LI
    Oncology Letters.2013; 5(6): 1787.     CrossRef
  • Nitrogen‐fixing bacteria with multiple plant growth‐promoting activities enhance growth of tomato and red pepper
    Md. Rashedul Islam, Tahera Sultana, M. Melvin Joe, Woojong Yim, Jang‐Cheon Cho, Tongmin Sa
    Journal of Basic Microbiology.2013; 53(12): 1004.     CrossRef
  • Diversity and physiological properties of root endophytic actinobacteria in native herbaceous plants of Korea
    Tae-Ui Kim, Sung-Heun Cho, Ji-Hye Han, Young Min Shin, Hyang Burm Lee, Seung Bum Kim
    The Journal of Microbiology.2012; 50(1): 50.     CrossRef
  • Study of the anti-sapstain fungus activity of Bacillus amyloliquefaciens CGMCC 5569 associated with Ginkgo biloba and identification of its active components
    Bo Yuan, Zhe Wang, Sheng Qin, Gui-Hua Zhao, You-Jian Feng, Li-Hui Wei, Ji-Hong Jiang
    Bioresource Technology.2012; 114: 536.     CrossRef
  • Molecular Diversity of Rhizobacteria in Ginseng Soil and Their Plant Benefiting Attributes
    Eun Hye Hong, Sun Hee Lee, Regupathy Thamizh Vendan, Young Ha Rhee
    The Korean Journal of Microbiology.2012; 48(4): 246.     CrossRef
  • Biosynthesis of Copolyesters Consisting of 3-Hydroxyvalerate and Medium-chain-length 3-hydroxyalkanoates by the Pseudomonas aeruginosa P-5 Strain
    Sang-Hee Woo, Jae-Hee Kim, Yu-Yang Ni, Young-Ha Rhee
    The Korean Journal of Microbiology.2012; 48(3): 200.     CrossRef
Reviews
REVIEW] Antibacterial strategies inspired by the oxidative stress and response networks
So Youn Kim , Chanseop Park , Hye-Jeong Jang , Bi-o Kim , Hee-Won Bae , In-Young Chung , Eun Sook Kim , You-Hee Cho
J. Microbiol. 2019;57(3):203-212.   Published online February 26, 2019
DOI: https://doi.org/10.1007/s12275-019-8711-9
  • 704 View
  • 0 Download
  • 135 Web of Science
  • 118 Crossref
AbstractAbstract PDF
Oxidative stress arises from an imbalance between the excessive accumulation of reactive oxygen species (ROS) and a cell’s capability to readily detoxify them. Although ROS are spontaneously generated during the normal oxygen respiration and metabolism, the ROS generation is usually augmented by redox-cycling agents, membrane disrupters, and bactericidal antibiotics, which contributes their antimicrobial bioactivity. It is noted that all the bacteria deploy an arsenal of inducible antioxidant defense systems to cope with the devastating effect exerted by the oxidative stress: these systems include the antioxidant effectors such as catalases and the master regulators such as OxyR. The oxidative stress response is not essential for normal growth, but critical to survive the oxidative stress conditions that the bacterial pathogens may encounter due to the host immune response and/or the antibiotic treatment. Based on these, we here define the ROS-inspired antibacterial strategies to enhance the oxidative stress of ROS generation and/or to compromise the bacterial response of ROS detoxification, by delineating the ROSgenerating antimicrobials and the core concept of the bacterial response against the oxidative stress.

Citations

Citations to this article as recorded by  
  • H2O2 Self‐Supplying CaO2/POM@MOF Bimodal Nanogeneration Materials for Photothermal and Chemodynamic Synergistic Antimicrobials
    Na Chen, Yuan Li, Yang Pan, Haozhe Wang, Hao Gu, Yuan Sun, Tiedong Sun
    Applied Organometallic Chemistry.2025;[Epub]     CrossRef
  • Harnessing natural antifouling agents for enhancing water and wastewater treatment membranes
    Dharma Raj Kandel, Donggyu Kwak, Somin Lee, Yu Jie Lim, Subhangi Subedi, Jaewoo Lee
    Separation and Purification Technology.2025; 359: 130254.     CrossRef
  • Antimicrobial effects and mechanistic exploration of micronized mgh2 particles against common oral pathogenic bacteria
    Qianqian Zhang, Yuxiao Chen, Qian Jiang, Baiyan Sui, Dingcheng Rao, Jiaxuan Wang, Guangyin Yuan, Xin Liu
    Applied Materials Today.2025; 42: 102567.     CrossRef
  • Chemical Profile, Antioxidant and Antimicrobial Activity of Marine Sponge Species Combined with Multivariate Statistical Analyses: Desmapsamma anchorata, Dysidea etheria and Echinodictyum dendroides
    Geane Gabriele de Oliveira Souza, José Walber Gonçalves Castro, Lariza Leisla Leandro Nascimento, Maria Inácio da Silva, Débora Odília Duarte Leite, George Joaquim Garcia Santos, Cicera Janaine Camilo, Irwin Rose Alencar de Menezes, José Galberto Martins
    Chemistry & Biodiversity.2025;[Epub]     CrossRef
  • Juxtaposing the antibacterial activities of different ZIFs in photodynamic therapy and their oxidative stress approach
    Ruth Antwi-Baah, Mirabel Ewura Esi Acquah, Malcom Frimpong Dapaah, Xiaoqin Chen, Joojo Walker, Heyang Liu
    Colloids and Surfaces B: Biointerfaces.2025; 247: 114397.     CrossRef
  • Understanding the antibacterial effects of incorporating chlorin e6-loaded zeolitic imidazolate framework-8 with cerium and polydopamine
    Ruth Antwi-Baah, Mirabel Ewura Esi Acquah, Malcom Frimpong Dapaah, Yajing Wang, Xiaoqin Chen, Joojo Walker, Heyang Liu
    Colloids and Surfaces A: Physicochemical and Engineering Aspects.2025; 706: 135768.     CrossRef
  • Synthesis of novel α-carboxylate-β-bismethylsulfanyl pyrazolyl Schiff base derivatives: Targeting DNA gyrase in antibacterial activity
    Ankita Garg, Dolar Dureja, Anjali Vijeata, Ganga Ram Chaudhary, Shiwani Berry, Savita Chaudhary, Aman Bhalla
    Journal of Molecular Structure.2025; 1337: 141954.     CrossRef
  • New Advances in Periodontal Functional Materials Based on Antibacterial, Anti‐Inflammatory, and Tissue Regeneration Strategies
    Haoyue Wu, Yuanfeng Li, Linqi Shi, Yong Liu, Jing Shen
    Advanced Healthcare Materials.2025;[Epub]     CrossRef
  • Tetracationic tetraaryltetranaphtho[2,3]porphyrins for photodynamic inactivation against Staphylococcus aureus biofilm
    Le Mi, Tao Xu, Ying-Yuan Peng, Marina G. Strakhovskaya, Yi-Jing Zhang, Gennady A. Meerovich, Tebello Nyokong, Yi-Jia Yan, Zhi-Long Chen
    European Journal of Medicinal Chemistry.2025; 290: 117558.     CrossRef
  • Application of Cold Atmospheric Pressure Plasma Jet Results in Achievement of Universal Antibacterial Properties on Various Plant Seeds
    Jakub Orlowski, Agata Motyka-Pomagruk, Anna Dzimitrowicz, Pawel Pohl, Dominik Terefinko, Ewa Lojkowska, Piotr Jamroz, Wojciech Sledz
    Applied Sciences.2025; 15(3): 1255.     CrossRef
  • Exogenous cystine increases susceptibility of drug-resistant Salmonella to gentamicin by promoting oxidation of glutathione metabolism and imbalance of intracellular redox levels
    Junyuan Du, Zhiyi Wu, Chunyang Zhu, Heng Yang, Feike Zhao, Binghu Fang
    Frontiers in Microbiology.2025;[Epub]     CrossRef
  • A Novel Type I Crustin Isoform from Scylla olivacea and its Antibacterial Potential: Membrane Depolarization, Disruption, and Induction of Reactive Oxygen Species as Modes of Action
    S. Neelima, M. V. Anju, K. Archana, V. V. Anooja, P. P. Athira, M. R. Revathy, M. Dhaneesha, A. Muneer, T. P. Sajeevan, S. Muhammed Musthafa, I. S. Bright Singh, S. Muraleedharan Nair, Rosamma Philip
    Probiotics and Antimicrobial Proteins.2025;[Epub]     CrossRef
  • Piezoelectric Biomaterial with Advanced Design for Tissue Infection Repair
    Siyuan Shang, Fuyuan Zheng, Wen Tan, Zhengyi Xing, Siyu Chen, Fuli Peng, Xiang Lv, Duan Wang, Xiangdong Zhu, Jiagang Wu, Zongke Zhou, Xingdong Zhang, Xiao Yang
    Advanced Science.2025;[Epub]     CrossRef
  • Impacts of Naphthenic Acids (NAs) Exposure on Soil Bacterial Community and Antibiotic Resistance Genes (ARGs) Dissemination
    Qianzhi Zeng, Qiangwei Liu, Yunhong Pu, Ping Gong, Yuxin Li, Yanan Sun, Yiming Hao, Qing Yang, Yaxuan Wu, Bowen Yang, Shengnan Shi, Zheng Gong
    Current Microbiology.2025;[Epub]     CrossRef
  • Green synthesis of multifunctional core/shell nanoparticles using Matricaria chamomilla extract as promising agents for combating microbial infections and oxidative stress
    Hajer S. Alorfi, Nahed O. Bawakid
    Journal of Molecular Structure.2025; 1338: 142336.     CrossRef
  • Recent advances in sugar-fatty acid esters and their analogs: antimicrobial properties, structural-functional relationships and potential mechanisms
    Ziyi Zhang, Qinlu Lin, Zhengyu Huang, Dong Xu, Kangzi Ren
    Critical Reviews in Food Science and Nutrition.2025; : 1.     CrossRef
  • Synthesis, characterization, and in‐depth molecular docking studies of 2‐naphthol derivatives with Escherichia coli receptors, coupled with comprehensive evaluation of antibacterial and antioxidant activities
    Vivekanandan P, Daniel Aroquiaraj A, Satheeshkumar K. S, Gassoumi Bouzid, Paularokiadoss Francisxavier, Ayachi Sahbi
    Vietnam Journal of Chemistry.2025;[Epub]     CrossRef
  • Evaluation of Antimicrobial Activity of Novel Chimeric M-PEX12 Peptide Against Acinetobacter baumannii
    Yasin Rakhshani, Hamideh Mahmoodzadeh Hosseini, Seyed Ali Mirhosseini, Fatah Sotoodehnejadnematalahi, Jafar Amani
    Iranian Journal of Pharmaceutical Research.2025;[Epub]     CrossRef
  • Polyester/cotton blended fabrics coated with natural rubber latex containing lignin nanoparticles and molybdenum disulfide nanosheets for medical and protective applications
    A.S. Sethulekshmi, Selvakumar Gopalsamy, B.D.S. Deeraj, Kuruvilla Joseph, Abi Santhosh Aprem, Suja Bhargavan Sisupal, Febin P. Jacob, Vinay Deep Punetha, Rakshit Pathak, Appukuttan Saritha
    International Journal of Biological Macromolecules.2025; 318: 144878.     CrossRef
  • Sustainable Nanotechnology Strategies for Modulating the Human Gut Microbiota
    Gréta Törős, Gabriella Gulyás, Hassan El-Ramady, Walaa Alibrahem, Arjun Muthu, Prasad Gangakhedkar, Reina Atieh, József Prokisch
    International Journal of Molecular Sciences.2025; 26(12): 5433.     CrossRef
  • GC-MS Analysis and Antimicrobial Properties of Defensive Secretions from the Millipede Coxobolellus saratani (Diplopoda: Spirobolida: Pseudospirobolellidae)
    Piyatida Pimvichai, Warinthan Jumpajan, Phikun Buaboon, Waraporn Sutthisa, Nattawadee Nantarat, Thierry Backeljau
    Journal of Chemical Ecology.2025;[Epub]     CrossRef
  • Self-assembled electrocatalytic TiO2 nanowire membrane for multifunctional water purification
    Naresh Mameda, Hyeona Park, Jinwoo Kim, Syed Salman Ali Shah, Saifur Rahman, Prajwal Sherugar, Hosung Lee, Kwang-Ho Choo
    Journal of Membrane Science.2025; 734: 124422.     CrossRef
  • Pse-T2-Based Short Peptides with Broad-Spectrum Antimicrobial Activity, Stability, and Safety Combat MDR Staphylococcus aureus In Vitro and in Mouse Infection Model
    Hee Kyoung Kang, Yoonkyung Park
    ACS Infectious Diseases.2025;[Epub]     CrossRef
  • Unveiling the potential of novel Metschnikowia yeast biosurfactants: triggering oxidative stress for promising antifungal and anticancer activity
    Sumeeta Kumari, Alka Kumari, Asmita Dhiman, Kanti Nandan Mihooliya, Manoj Raje, G. S. Prasad, Anil Kumar Pinnaka
    Microbial Cell Factories.2024;[Epub]     CrossRef
  • Iron‐doped nanozymes with spontaneous peroxidase‐mimic activity as a promising antibacterial therapy for bacterial keratitis
    Xiwen Geng, Nan Zhang, Zhanrong Li, Mengyang Zhao, Hongbo Zhang, Jingguo Li
    Smart Medicine.2024;[Epub]     CrossRef
  • N-acetylcysteine promotes doxycycline resistance in the bacterial pathogen Edwardsiella tarda
    Juan Guo, Qingqiang Xu, Yilin Zhong, Yubin Su
    Virulence.2024;[Epub]     CrossRef
  • The ability in managing reactive oxygen species affects Escherichia coli persistence to ampicillin after nutrient shifts
    Ruixue Zhang, Christopher Hartline, Fuzhong Zhang, Danielle Tullman-Ercek
    mSystems.2024;[Epub]     CrossRef
  • Morphological diversity of actinobacteria isolated from oil palm compost (Elaeis guineensis)
    Juliana Hiromi Emin Uesugi, Daniel dos Santos Caldas, Brunna Beatrys Farias Coelho, Maria Clara Coelho Prazes, Lucas Yukio Emin Omura, José Alyson Rocha Pismel, Nilson Veloso Bezerra
    Brazilian Journal of Microbiology.2024; 55(1): 455.     CrossRef
  • Expression of Rhodococcus erythropolis stress genes in planctonic culture supplemented with various hydrocabons
    Ivan Sazykin, Alla Litsevich, Ludmila Khmelevtsova, Tatiana Azhogina, Maria Klimova, Shorena Karchava, Margarita Khammami, Elena Chernyshenko, Ekaterina Naumova, Marina Sazykina
    Microbiological Research.2024; 289: 127920.     CrossRef
  • Green Synthesis of Cerium Oxide Nanoparticles, Characterization, and Their Neuroprotective Effect on Hydrogen Peroxide-Induced Oxidative Injury in Human Neuroblastoma (SH-SY5Y) Cell Line
    Madhugiri Gopinath Mamatha, Mohammad Azam Ansari, M Yasmin Begum, Daruka Prasad B., Adel Al Fatease, Umme Hani, Mohammad N. Alomary, Sumreen Sultana, Shital Manohar Punekar, Nivedika M.B., Thimappa Ramachandrappa Lakshmeesha, Tekupalli Ravikiran
    ACS Omega.2024; 9(2): 2639.     CrossRef
  • Response of Bacillus velezensis 83 to interaction with Colletotrichum gloeosporioides resembles a Greek phalanx-style formation: A stress resistant phenotype with antibiosis capacity
    Agustín Luna-Bulbarela, María Teresa Romero-Gutiérrez, Raunel Tinoco-Valencia, Ernesto Ortiz, María Esperanza Martínez-Romero, Enrique Galindo, Leobardo Serrano-Carreón
    Microbiological Research.2024; 280: 127592.     CrossRef
  • FRET‐Amplified Singlet Oxygen Generation by Nanocomposites Comprising Ternary AgInS2/ZnS Quantum Dots and Molecular Photosensitizers
    Tatiana O. Oskolkova, Anna A. Matiushkina, Lyubov' N. Borodina, Ekaterina S. Smirnova, Antonina I. Dadadzhanova, Fayza A. Sewid, Andrey V. Veniaminov, Ekaterina O. Moiseeva, Anna O. Orlova
    ChemNanoMat.2024;[Epub]     CrossRef
  • Antioxidant and Pro-Oxidant Properties of Selected Clinically Applied Antibiotics: Therapeutic Insights
    Tibor Maliar, Marcela Blažková, Jaroslav Polák, Mária Maliarová, Eva Ürgeová, Jana Viskupičová
    Pharmaceuticals.2024; 17(10): 1257.     CrossRef
  • Fe3O4 NPs-encapsulated metal-organic framework/enzyme hybrid nanoreactor for drug-resistant bacterial elimination via enhanced chemodynamictherapy
    Xinyu Song, Qiufan Jiang, Junyang Ma, Yang Liu, Liangliang Zhang, Tingting Jiang, Jie Zhang, Qing Li, Jie Sun
    Ceramics International.2024; 50(5): 7486.     CrossRef
  • Reactive Oxygen Species (ROS)-Mediated Antibacterial Oxidative Therapies: Available Methods to Generate ROS and a Novel Option Proposal
    Silvana Alfei, Gian Carlo Schito, Anna Maria Schito, Guendalina Zuccari
    International Journal of Molecular Sciences.2024; 25(13): 7182.     CrossRef
  • Recent advances in micro/nanomotors for antibacterial applications
    Wenxia Wang, Hangyu Luo, Han Wang
    Journal of Materials Chemistry B.2024; 12(21): 5000.     CrossRef
  • Design, synthesis, and evaluation of N1,N3-dialkyldioxonaphthoimidazoliums as antibacterial agents against methicillin-resistant Staphylococcus aureus
    Taewoo Kim, Shin-Yae Choi, Hee-Won Bae, Hyun Su Kim, Hoon Jeon, Haejun Oh, Sung-Hoon Ahn, Jongkook Lee, Young-Ger Suh, You-Hee Cho, Seok-Ho Kim
    European Journal of Medicinal Chemistry.2024; 272: 116454.     CrossRef
  • Synergistic collaboration between AMPs and non-direct antimicrobial cationic peptides
    Zifan Ye, Lei Fu, Shuangyu Li, Ziying Chen, Jianhong Ouyang, Xinci Shang, Yanli Liu, Lianghui Gao, Yipeng Wang
    Nature Communications.2024;[Epub]     CrossRef
  • Mechanistic Insights into Toxicity of Titanium Dioxide Nanoparticles at the Micro- and Macro-levels
    Sharmistha Chatterjee, Parames C. Sil
    Chemical Research in Toxicology.2024; 37(10): 1612.     CrossRef
  • In Vitro Antioxidant and In Silico Evaluation of the Anti-β-Lactamase Potential of the Extracts of Cylindrospermum alatosporum NR125682 and Loriellopsis cavenicola NR117881
    Albert O. Ikhane, Siphesihle Z. Sithole, Nkosinathi D. Cele, Foluso O. Osunsanmi, Rebamang A. Mosa, Andrew R. Opoku
    Antioxidants.2024; 13(5): 608.     CrossRef
  • Isolation and Characterization of Biosurfactant-Producing Bacteria from Garlic Farmland Soil and Evaluation of Antimicrobial Activity
    S. Ren, Y. Wu, Y. Wang, C. Yuan, Z. Liu, F. Zhao
    Applied Biochemistry and Microbiology.2024; 60(4): 640.     CrossRef
  • Enhancing wound healing through sonodynamic silver/barium titanate heterostructures-loading gelatin/PCL nanodressings
    Yu-Sen Zhang, Shuai Ke, Xiao Hu, Shuang-Ying Wang, Wan-Qi Peng, Xin-Hang Qian, Ling-Hui Tian, Hui-Jun Wu, Bing-Hui Li, Xian-Tao Zeng, Ling-Ling Zhang
    International Journal of Biological Macromolecules.2024; 283: 137648.     CrossRef
  • From growth inhibition to ultrastructural changes: Toxicological assessment of lambda cyhalothrin and fosetyl aluminium against Bacillus subtilis and Pseudomonas aeruginosa
    Asma Rabbani Sodhozai, Safia Bibi, Mahwish Rabia, Muneeba Jadoon, Hafsah Akhtar, Naeem Ali
    Environmental Research.2024; 252: 118958.     CrossRef
  • Nanomedicine Advancements: Vanadium Oxide Nanoparticles as a Game-Changer in Antimicrobial and Anticancer Therapies
    Adebayo Efunnuga, Adeyemi Efunnuga, Asishana Paul Onivefu, Ikhazuagbe H. Ifijen, Muniratu Maliki, Stanley O. Omorogbe, Akinola David Olugbemide
    BioNanoScience.2024; 14(3): 3715.     CrossRef
  • Insights into the Synergistic Antibacterial Activity of Silver Nitrate with Potassium Tellurite against Pseudomonas aeruginosa
    Ali Pormohammad, Andrea Firrincieli, Daniel A. Salazar-Alemán, Mehdi Mohammadi, Dave Hansen, Martina Cappelletti, Davide Zannoni, Mohammad Zarei, Raymond J. Turner, Paolo Visca, Jennifer Goff
    Microbiology Spectrum.2023;[Epub]     CrossRef
  • In Silico-Based Design of a Hybrid Peptide with Antimicrobial Activity against Multidrug-Resistant Pseudomonas aeruginosa Using a Spider Toxin Peptide
    Min Kyoung Shin, Hye-Ran Park, In-Wook Hwang, Kyung-Bin Bu, Bo-Young Jang, Seung-Ho Lee, Jin Wook Oh, Jung Sun Yoo, Jung-Suk Sung
    Toxins.2023; 15(12): 668.     CrossRef
  • Tackling the emerging Artemisinin-resistant malaria parasite by modulation of defensive oxido-reductive mechanism via nitrofurantoin repurposing
    Sadat Shafi, Sonal Gupta, Ravi Jain, Rumaisha Shoaib, Akshay Munjal, Preeti Maurya, Purnendu Kumar, Abul Kalam Najmi, Shailja Singh
    Biochemical Pharmacology.2023; 215: 115756.     CrossRef
  • Differential Cellular Sensing of Fusion from within and Fusion from without during Virus Infection
    David N. Hare, Tetyana Murdza, Susan Collins, Katharina Schulz, Subhendu Mukherjee, Roberto de Antueno, Luke Janssen, Roy Duncan, Karen L. Mossman
    Viruses.2023; 15(2): 301.     CrossRef
  • Nanomaterials-based photothermal therapies for antibacterial applications
    Hao Liu, Fei Xing, Yuxi Zhou, Peiyun Yu, Jiawei Xu, Rong Luo, Zhou Xiang, Pol Maria Rommens, Ming Liu, Ulrike Ritz
    Materials & Design.2023; 233: 112231.     CrossRef
  • Novel copper-containing ferrite nanoparticles exert lethality to MRSA by disrupting MRSA cell membrane permeability, depleting intracellular iron ions, and upregulating ROS levels
    Jinhua Ye, Fangpeng Hou, Guanyu Chen, Tianyu Zhong, Junxia Xue, Fangyou Yu, Yi Lai, Yingjie Yang, Dedong Liu, Yuantong Tian, Junyun Huang
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Metallogels from Silver Nanoparticles and Peptide Nanofibers as Antimicrobial Surfaces
    Dipayan Bairagi, Purnadas Ghosh, Priyanka Roy, Arindam Banerjee
    ACS Applied Nano Materials.2023; 6(4): 2299.     CrossRef
  • Protective effect of 13-methylberberine against mouse enteritis caused by MRSA
    Wei-Mei Wang, Zhen Zhang, Liang Sun, Chao Ma, Zhi-Hai Liu, Shuai-Cheng Wu
    Journal of Ethnopharmacology.2023; 304: 115994.     CrossRef
  • Fabrication, spectroscopic properties, antioxidant and antimicrobial activities of Chitosan-CaLi@Flumox nanocomposites
    A. M. Mansour, Mohamed S. Abdel-Aziz, Abdul Aziz M. Gad, Ali B. Abou Hammad, Amany M. El Nahrawy
    SN Applied Sciences.2023;[Epub]     CrossRef
  • Exploring the Antimicrobial and Antitumoral Activities of Naphthoquinone-Grafted Chitosans
    Fernanda Petzold Pauli, Cyntia Silva Freitas, Patricia Ribeiro Pereira, Alviclér Magalhães, Fernando de Carvalho da Silva, Vania M. F. Paschoalin, Vitor Francisco Ferreira
    Polymers.2023; 15(6): 1430.     CrossRef
  • MXenes Antibacterial Properties and Applications: A Review and Perspective
    Farzad Seidi, Ahmad Arabi Shamsabadi, Mostafa Dadashi Firouzjaei, Mark Elliott, Mohammad Reza Saeb, Yang Huang, Chengcheng Li, Huining Xiao, Babak Anasori
    Small.2023;[Epub]     CrossRef
  • Surfactant-Mediated Ultrasonic-Assisted Extraction and Purification of Antioxidants from Chaenomeles speciosa (Sweet) Nakai for Chemical- and Cell-Based Antioxidant Capacity Evaluation
    Fuxia Hu, Feng Li, Zhenjia Zheng, Dongxiao Sun-Waterhouse, Zhaosheng Wang
    Molecules.2022; 27(22): 7970.     CrossRef
  • Antibacterial, Antibiofilm, and Antioxidant Activity of 15 Different Plant-Based Natural Compounds in Comparison with Ciprofloxacin and Gentamicin
    Ali Pormohammad, Dave Hansen, Raymond J. Turner
    Antibiotics.2022; 11(8): 1099.     CrossRef
  • Sodium copper chlorophyll mediated photodynamic treatment inactivates Escherichia coli via oxidative damage
    Zequn Zhang, Jianran Qin, Zhe Wang, Fang Chen, Xiaojun Liao, Xiaosong Hu, Li Dong
    Food Research International.2022; 157: 111472.     CrossRef
  • Oxidative Stress-Mediated Antibacterial Activity of the Total Flavonoid Extracted from the Agrimonia pilosa Ledeb. in Methicillin-Resistant Staphylococcusaureus (MRSA)
    Liren He, Han Cheng, Fuxin Chen, Suquan Song, Hang Zhang, Weidong Sun, Xiaowei Bao, Haibin Zhang, Chenghua He
    Veterinary Sciences.2022; 9(2): 71.     CrossRef
  • Polyoxometalate nanomaterials for enhanced reactive oxygen species theranostics
    Jiale Liu, Mengyao Huang, Xinyu Zhang, Zhongyu Hua, Zeran Feng, Yi Dong, Tiedong Sun, Xiao Sun, Chunxia Chen
    Coordination Chemistry Reviews.2022; 472: 214785.     CrossRef
  • Anti- and Pro-Oxidant Properties of Essential Oils against Antimicrobial Resistance
    Amanda Shen-Yee Kong, Sathiya Maran, Polly Soo-Xi Yap, Swee-Hua Erin Lim, Shun-Kai Yang, Wan-Hee Cheng, Yong-Hui Tan, Kok-Song Lai
    Antioxidants.2022; 11(9): 1819.     CrossRef
  • Catalase regulates the homeostasis of hemolymph microbiota and autophagy of the hemocytes in mud crab (Scylla paramamosain)
    Ming Zhang, Peina Ji, Zhongzhen Li, Zaiqiao Sun, Ngoc Tuan Tran, Shengkang Li
    Aquaculture Reports.2022; 25: 101237.     CrossRef
  • Dietary Polyphenols and Their Role in Oxidative Stress-Induced Human Diseases: Insights Into Protective Effects, Antioxidant Potentials and Mechanism(s) of Action
    Mithun Rudrapal, Shubham J. Khairnar, Johra Khan, Abdulaziz Bin Dukhyil, Mohammad Azam Ansari, Mohammad N. Alomary, Fahad M. Alshabrmi, Santwana Palai, Prashanta Kumar Deb, Rajlakshmi Devi
    Frontiers in Pharmacology.2022;[Epub]     CrossRef
  • Genome Characterization and Probiotic Potential of Corynebacterium amycolatum Human Vaginal Isolates
    Irina V. Gladysheva, Sergey V. Cherkasov, Yuriy A. Khlopko, Andrey O. Plotnikov
    Microorganisms.2022; 10(2): 249.     CrossRef
  • The Untargeted Phytochemical Profile of Three Meliaceae Species Related to In Vitro Cytotoxicity and Anti-Virulence Activity against MRSA Isolates
    Leilei Zhang, Maha M. Ismail, Gabriele Rocchetti, Nesrin M. Fayek, Luigi Lucini, Fatema R. Saber
    Molecules.2022; 27(2): 435.     CrossRef
  • MoS2 based nanomaterials: Advanced antibacterial agents for future
    A.S. Sethulekshmi, Appukuttan Saritha, Kuruvilla Joseph, Abi Santhosh Aprem, Suja Bhargavan Sisupal
    Journal of Controlled Release.2022; 348: 158.     CrossRef
  • Polyphenols as Potent Epigenetics Agents for Cancer
    Peramaiyan Rajendran, Salaheldin Abdelraouf Abdelsalam, Kaviyarasi Renu, Vishnupriya Veeraraghavan, Rebai Ben Ammar, Emad A. Ahmed
    International Journal of Molecular Sciences.2022; 23(19): 11712.     CrossRef
  • Advancements in antimicrobial nanoscale materials and self-assembling systems
    Jack A. Doolan, George T. Williams, Kira L. F. Hilton, Rajas Chaudhari, John S. Fossey, Benjamin T. Goult, Jennifer R. Hiscock
    Chemical Society Reviews.2022; 51(20): 8696.     CrossRef
  • Biodegradable peptide polymers as alternatives to antibiotics used in aquaculture
    Pengcheng Ma, Yueming Wu, Weinan Jiang, Ning Shao, Min Zhou, Yuan Chen, Jiayang Xie, Zhongqian Qiao, Runhui Liu
    Biomaterials Science.2022; 10(15): 4193.     CrossRef
  • Photoinactivation of Salmonella enterica exposed to 5-aminolevulinic acid: Impact of sensitization conditions and irradiation time
    Evelina Polmickaitė-Smirnova, Irina Buchovec, Saulius Bagdonas, Edita Sužiedėlienė, Arūnas Ramanavičius, Žilvinas Anusevičius
    Journal of Photochemistry and Photobiology B: Biology.2022; 231: 112446.     CrossRef
  • Comparative study on antimicrobial activity of mono-rhamnolipid and di-rhamnolipid and exploration of cost-effective antimicrobial agents for agricultural applications
    Feng Zhao, Bingxin Wang, Menglin Yuan, Sijia Ren
    Microbial Cell Factories.2022;[Epub]     CrossRef
  • Redox Impact on Bacterial Macromolecule: A Promising Avenue for Discovery and Development of Novel Antibacterials
    Jamiu Olaseni Aribisala, Saheed Sabiu
    Biomolecules.2022; 12(11): 1545.     CrossRef
  • Novel Antimicrobial Peptide “Octoprohibitin” against Multidrug Resistant Acinetobacter baumannii
    E. H. T. Thulshan Jayathilaka, Dinusha C. Rajapaksha, Chamilani Nikapitiya, Joeun Lee, Mahanama De Zoysa, Ilson Whang
    Pharmaceuticals.2022; 15(8): 928.     CrossRef
  • Green synthesis of silver nanoparticles from Mahonia fortunei extracts and characterization of its inhibitory effect on Chinese cabbage soft rot pathogen
    Zhenlin Wei, Shuoqi Xu, Haoran Jia, Hongmei Zhang
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Artemisinin displays bactericidal activity via copper-mediated DNA damage
    In-Young Chung, Hye-Jeong Jang, Yeon-Ji Yoo, Joonseong Hur, Hyo-Young Oh, Seok-Ho Kim, You-Hee Cho
    Virulence.2022; 13(1): 149.     CrossRef
  • Gold nanoparticle-DNA aptamer-assisted delivery of antimicrobial peptide effectively inhibits Acinetobacter baumannii infection in mice
    Jaeyeong Park, Eunkyoung Shin, Ji-Hyun Yeom, Younkyung Choi, Minju Joo, Minho Lee, Je Hyeong Kim, Jeehyeon Bae, Kangseok Lee
    Journal of Microbiology.2022; 60(1): 128.     CrossRef
  • Cu–Ce oxide Co-loaded silicon nanocapsules for hydrogen peroxide self-supplied Fenton-like catalysis and synergistically antibacterial therapy
    Yuxin Zhu, Yue Zhao, Xun Sun, Fuhao An, Lanya Jiao, Xuan Sun
    Environmental Research.2022; 212: 113444.     CrossRef
  • Current Knowledge on the Oxidative-Stress-Mediated Antimicrobial Properties of Metal-Based Nanoparticles
    Nour Mammari, Emmanuel Lamouroux, Ariane Boudier, Raphaël E. Duval
    Microorganisms.2022; 10(2): 437.     CrossRef
  • Effective Antibacterial Activity of Degradable Copper-Doped Phosphate-Based Glass Nanozymes
    Yifan Liu, Ning Nie, Huanfeng Tang, Congrou Zhang, Kezheng Chen, Wei Wang, Jianfeng Liu
    ACS Applied Materials & Interfaces.2021; 13(10): 11631.     CrossRef
  • Stress response in Rhodococcus strains
    Miroslav Pátek, Michal Grulich, Jan Nešvera
    Biotechnology Advances.2021; 53: 107698.     CrossRef
  • Review on the Antibacterial Mechanism of Plant-Derived Compounds against Multidrug-Resistant Bacteria (MDR)
    Najwan Jubair, Mogana Rajagopal, Sasikala Chinnappan, Norhayati Binti Abdullah, Ayesha Fatima, Armando Zarrelli
    Evidence-Based Complementary and Alternative Medicine.2021; 2021: 1.     CrossRef
  • Visible light-induced antibacterial effect of MoS2: Effect of the synthesis methods
    Manman Zhang, Kun Wang, Shaohua Zeng, Ying Xu, Wangyan Nie, Pengpeng Chen, Yifeng Zhou
    Chemical Engineering Journal.2021; 411: 128517.     CrossRef
  • Electrified Membranes for Water Treatment Applications
    Meng Sun, Xiaoxiong Wang, Lea R. Winter, Yumeng Zhao, Wen Ma, Tayler Hedtke, Jae-Hong Kim, Menachem Elimelech
    ACS ES&T Engineering.2021; 1(4): 725.     CrossRef
  • Linoleic Acid Triggered a Metabolomic Stress Condition in Three Species of Bifidobacteria Characterized by Different Conjugated Linoleic Acid-Producing Abilities
    Yongchao Mei, Haiqin Chen, Bo Yang, Jianxin Zhao, Hao Zhang, Wei Chen
    Journal of Agricultural and Food Chemistry.2021; 69(38): 11311.     CrossRef
  • In vitro and in silico protocols for the assessment of microbicidal compounds from Plumbago zeylanica L
    V. Vanitha, S. Vijayakumar, S. Prabhu, M. Nilavukkarasi, V.N. Punitha, E. Vidhya, P.K. Praseetha
    Gene Reports.2021; 25: 101393.     CrossRef
  • Qiangji Jianli Decoction Alleviates Hydrogen Peroxide‐Induced Mitochondrial Dysfunction via Regulating Mitochondrial Dynamics and Biogenesis in L6 Myoblasts
    Jingwei Song, Qing Li, Lingling Ke, Jian Liang, Wei Jiao, Huafeng Pan, Yanwu Li, Qun Du, Yafang Song, Aidong Ji, Zhiwei Chen, Jinqiu Li, Lanqi Li, Jos L. Quiles
    Oxidative Medicine and Cellular Longevity.2021;[Epub]     CrossRef
  • The Richness and Diversity of Catalases in Bacteria
    Fang Yuan, Shouliang Yin, Yang Xu, Lijun Xiang, Haiyan Wang, Zilong Li, Keqiang Fan, Guohui Pan
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Redox Active Antimicrobial Peptides in Controlling Growth of Microorganisms at Body Barriers
    Piotr Brzoza, Urszula Godlewska, Arkadiusz Borek, Agnieszka Morytko, Aneta Zegar, Patrycja Kwiecinska, Brian A. Zabel, Artur Osyczka, Mateusz Kwitniewski, Joanna Cichy
    Antioxidants.2021; 10(3): 446.     CrossRef
  • Sprayed copper peroxide nanodots for accelerating wound healing in a multidrug-resistant bacteria infected diabetic ulcer
    Ran Zhang, Guhua Jiang, Qianqian Gao, Xiaona Wang, Yilin Wang, Xin Xu, Wenjing Yan, Haijun Shen
    Nanoscale.2021; 13(37): 15937.     CrossRef
  • Bimetallic palladium@copper nanoparticles: Lethal effect on the gram-negative bacterium Pseudomonas aeruginosa
    Xue Huang, Ting Li, Xiaochun Zhang, Jun Deng, Xuntao Yin
    Materials Science and Engineering: C.2021; 129: 112392.     CrossRef
  • Antimicrobials Functioning through ROS-Mediated Mechanisms: Current Insights
    Ankita Vaishampayan, Elisabeth Grohmann
    Microorganisms.2021; 10(1): 61.     CrossRef
  • OxyR-Like Improves Cell Hydrogen Peroxide Tolerance by Participating in Monocyte Chemotaxis and Oxidative Phosphorylation Regulation in Magnetospirillum Gryphiswaldense MSR-1
    Yong Ma, Fangfang Guo, Yunpeng Zhang, Xiuyu Sun, Tong Wen, Wei Jiang
    Journal of Biomedical Nanotechnology.2021; 17(12): 2466.     CrossRef
  • Short-term effects of ciprofloxacin on enhanced biological phosphorus removal based on anaerobic and aerobic metabolism
    Yiwen Lin, Ruyi Wang, Juqing Lou, Jing Cai, Peide Sun
    Desalination and Water Treatment.2021; 236: 203.     CrossRef
  • Nanostructured Surfaces with Multimodal Antimicrobial Action
    Siti Nurhanna Riduan, Yugen Zhang
    Accounts of Chemical Research.2021; 54(24): 4508.     CrossRef
  • Silver nanoparticles-induced H2O2 triggers apoptosis-like death and is associated with dinF in Escherichia coli
    Suhyun Kim, Dong Gun Lee
    Free Radical Research.2021; 55(2): 107.     CrossRef
  • Contributions of Glycolipid Biosurfactants and Glycolipid-Modified Materials to Antimicrobial Strategy: A Review
    Qin Shu, Hanghang Lou, Tianyu Wei, Xiayu Liu, Qihe Chen
    Pharmaceutics.2021; 13(2): 227.     CrossRef
  • Pomegranate-Like CuO2@SiO2 Nanospheres as H2O2 Self-Supplying and Robust Oxygen Generators for Enhanced Antibacterial Activity
    Xiang Li, Manman Liang, Shulong Jiang, Shiya Cao, Siheng Li, Yubo Gao, Jing Liu, Qiang Bai, Ning Sui, Zhiling Zhu
    ACS Applied Materials & Interfaces.2021; 13(19): 22169.     CrossRef
  • The membrane-targeting mechanism of host defense peptides inspiring the design of polypeptide-conjugated gold nanoparticles exhibiting effective antibacterial activity against methicillin-resistant Staphylococcus aureus
    Weiwei Zhang, Yueming Wu, Longqiang Liu, Ximian Xiao, Zihao Cong, Ning Shao, Zhongqian Qiao, Kang Chen, Shiqi Liu, Haodong Zhang, Zhemin Ji, Xiaoyan Shao, Yidong Dai, Hongyan He, Jiang Xia, Jian Fei, Runhui Liu
    Journal of Materials Chemistry B.2021; 9(25): 5092.     CrossRef
  • Tafenoquine: A Step toward Malaria Elimination
    Kuan-Yi Lu, Emily R. Derbyshire
    Biochemistry.2020; 59(8): 911.     CrossRef
  • Macrophage LC3-associated phagocytosis is an immune defense against Streptococcus pneumoniae that diminishes with host aging
    Megumi Inomata, Shuying Xu, Pallavi Chandra, Simin N. Meydani, Genzou Takemura, Jennifer A. Philips, John M. Leong
    Proceedings of the National Academy of Sciences.2020; 117(52): 33561.     CrossRef
  • Reactive Oxygen Species and Antioxidants in Carcinogenesis and Tumor Therapy
    S. M. Vostrikova, A. B. Grinev, V. G. Gogvadze
    Biochemistry (Moscow).2020; 85(10): 1254.     CrossRef
  • Dialog between skin and its microbiota: Emergence of “Cutaneous Bacterial Endocrinology”
    Pierre‐Jean Racine, Xavier Janvier, Maximilien Clabaut, Chloe Catovic, Djouhar Souak, Amine M. Boukerb, Anne Groboillot, Yoan Konto‐Ghiorghi, Cécile Duclairoir‐Poc, Olivier Lesouhaitier, Nicole Orange, Sylvie Chevalier, Marc G. J. Feuilloley
    Experimental Dermatology.2020; 29(9): 790.     CrossRef
  • Proteomics study unveils ROS balance in acid-adapted Salmonella Enteritidis
    Shuangfang Hu, Yigang Yu, Ziquan Lv, Jianzhong Shen, Yuebin Ke, Xinglong Xiao
    Food Microbiology.2020; 92: 103585.     CrossRef
  • Simultaneous solid-liquid separation and wastewater disinfection using an electrochemical dynamic membrane filtration system
    Qian Lei, Junjian Zheng, Jinxing Ma, Xueye Wang, Zhichao Wu, Zhiwei Wang
    Environmental Research.2020; 180: 108861.     CrossRef
  • Graphdiyne-modified TiO2 nanofibers with osteoinductive and enhanced photocatalytic antibacterial activities to prevent implant infection
    Rui Wang, Miusi Shi, Feiyan Xu, Yun Qiu, Peng Zhang, Kailun Shen, Qin Zhao, Jiaguo Yu, Yufeng Zhang
    Nature Communications.2020;[Epub]     CrossRef
  • Antibacterial action of lactoferricin B like peptide against Escherichia coli : reactive oxygen species‐induced apoptosis‐like death
    B. Lee, J.S. Hwang, D.G. Lee
    Journal of Applied Microbiology.2020; 129(2): 287.     CrossRef
  • Antibiotic resistance mitigation: the development of alternative general strategies
    Siti Nurhanna Riduan, Arunmozhiarasi Armugam, Yugen Zhang
    Journal of Materials Chemistry B.2020; 8(30): 6317.     CrossRef
  • Nanocopper-loaded Black phosphorus nanocomposites for efficient synergistic antibacterial application
    Dandan Zhang, Hui Ming Liu, XiuLin Shu, Jin Feng, Ping Yang, Peng Dong, XiaoBao Xie, QingShan Shi
    Journal of Hazardous Materials.2020; 393: 122317.     CrossRef
  • The insertion of functional groups in organic selenium compounds promote changes in mitochondrial parameters and raise the antibacterial activity
    Sílvio Terra Stefanello, Caren Rigon Mizdal, Débora Farina Gonçalves, Diane Duarte Hartmann, Fernando Dobrachinski, Nélson Rodrigues de Carvalho, Syed Muhammad Salman, André C. Sauer, Luciano Dornelles, Marli Matiko Anraku de Campos, Félix Alexandre Antun
    Bioorganic Chemistry.2020; 98: 103727.     CrossRef
  • Oxidative Stress: Concept and Some Practical Aspects
    Helmut Sies
    Antioxidants.2020; 9(9): 852.     CrossRef
  • Pseudomonas aeruginosa Presents Multiple Vital Changes in Its Proteome in the Presence of 3-Hydroxyphenylacetic Acid, a Promising Antimicrobial Agent
    Ozgun O. Ozdemir, Ferda Soyer
    ACS Omega.2020; 5(32): 19938.     CrossRef
  • Oxidative Stress Transcriptional Responses of Escherichia coli at GaN Interfaces
    Sara Gleco, Theophraste Noussi, Akamu Jude, Pramod Reddy, Ronny Kirste, Ramón Collazo, Dennis LaJeunesse, Albena Ivanisevic
    ACS Applied Bio Materials.2020; 3(12): 9073.     CrossRef
  • Oxidative Stress-Generating Antimicrobials, a Novel Strategy to Overcome Antibacterial Resistance
    Álvaro Mourenza, José A. Gil, Luís M. Mateos, Michal Letek
    Antioxidants.2020; 9(5): 361.     CrossRef
  • A Novel Screening Strategy Reveals ROS-Generating Antimicrobials That Act Synergistically against the Intracellular Veterinary Pathogen Rhodococcus equi
    Álvaro Mourenza, José A. Gil, Luís M. Mateos, Michal Letek
    Antioxidants.2020; 9(2): 114.     CrossRef
  • Copper/Carbon Hybrid Nanozyme: Tuning Catalytic Activity by the Copper State for Antibacterial Therapy
    Juqun Xi, Gen Wei, Lanfang An, Zhuobin Xu, Zhilong Xu, Lei Fan, Lizeng Gao
    Nano Letters.2019; 19(11): 7645.     CrossRef
  • Perspectives towards antibiotic resistance: from molecules to population
    Joon-Hee Lee
    Journal of Microbiology.2019; 57(3): 181.     CrossRef
  • Antibacterial Activity and Molecular Docking Studies of a Selected Series of Hydroxy-3-arylcoumarins
    Maria Barbara Pisano, Amit Kumar, Rosaria Medda, Gianluca Gatto, Rajesh Pal, Antonella Fais, Benedetta Era, Sofia Cosentino, Eugenio Uriarte, Lourdes Santana, Francesca Pintus, Maria João Matos
    Molecules.2019; 24(15): 2815.     CrossRef
  • PgRsp Is a Novel Redox-Sensing Transcription Regulator Essential for Porphyromonas gingivalis Virulence
    Michał Śmiga, Teresa Olczak
    Microorganisms.2019; 7(12): 623.     CrossRef
MINIREVIEW] Rapid and robust MALDI-TOF MS techniques for microbial identification: a brief overview of their diverse applications
Kyoung-Soon Jang , Young Hwan Kim
J. Microbiol. 2018;56(4):209-216.   Published online February 28, 2018
DOI: https://doi.org/10.1007/s12275-018-7457-0
  • 796 View
  • 2 Download
  • 115 Crossref
AbstractAbstract PDF
Advances in mass spectrometry have enabled the investigation of various biological systems by directly analyzing diverse sets of biomolecules (i.e., proteins, lipids, and carbohydrates), thus making a significant impact on the life sciences field. Over the past decade, matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) has been widely utilized as a rapid and reliable method for the identification of microorganisms. MALDI-TOF MS has come into widespread use despite its relatively low resolving power (full width at half maximum, FWHM: < 5,000) and its incompatibility with tandem MS analysis, features with which other high-resolution mass spectrometers are equipped. Microbial identification is achieved by searching databases containing mass spectra of peptides and proteins extracted from microorganisms of interest, using scoring algorithms to match analyzed spectra with reference spectra. In this paper, we give a brief overview of the diverse applications of rapid and robust MALDI-TOF MS-based techniques for microbial identification in a variety of fields, such as clinical diagnosis and environmental and food monitoring. We also describe the fundamental principles of MALDI-TOF MS. The general specifications of the two major MS-based microbial identification systems available in the global market (BioTyper® and VITEK® MS Plus) and the distribution of these instruments in Republic of Korea are also discussed. The current review provides an understanding of this emerging microbial identification and classification technology and will help bacteriologists and cell biologists take advantage of this powerful technique.

Citations

Citations to this article as recorded by  
  • Mass Spectrometry Analysis for Clinical Applications: A Review
    Hong Zhang, Yali Yang, Yanxiao Jiang, Meng Zhang, Zhilong Xu, Xiaofei Wang, Jie Jiang
    Critical Reviews in Analytical Chemistry.2025; 55(1): 213.     CrossRef
  • Thermo-responsive 3D nanostructures for enhanced performance in food-poisoning bacterial analysis
    Yeonwoo Jeong, Jueun Kim, Jina Lee, Seungbeom Seo, Seokbeom Roh, Gyudo Lee, Bong Gill Choi, Nam Ho Bae, Juyeon Jung, Taejoon Kang, Kyoung G. Lee, Eun-Kyung Lim
    Materials Horizons.2025; 12(2): 451.     CrossRef
  • Comparative evaluation of BacT/ALERT VIRTUO and BACTEC FX400 blood culture systems for the detection of bloodstream infections
    Yurong Qin, Yiwen Liao, Jingfang Zhou, Weijiang Liu, Huimin Chen, Xiaoli Chen, Weisha Wang, Ni Zhang, Yunhu Zhao, Liang Wang, Bing Gu, Suling Liu, Benjamin M. Liu
    Microbiology Spectrum.2025;[Epub]     CrossRef
  • Spectral Precision: Recent Advances in Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry for Pathogen Detection and Resistance Profiling
    Ayman Elbehiry, Adil Abalkhail
    Microorganisms.2025; 13(7): 1473.     CrossRef
  • Accelerating antimicrobial stewardship: An AI-CDSS approach to combating multidrug-resistant pathogens in the era of increasing resistance
    Tai-Han Lin, Hsing-Yi Chung, Ming-Jr Jian, Chih-Kai Chang, Cherng-Lih Perng, Feng-Yee Chang, Chien-Wen Chen, Hung-Sheng Shang
    Clinica Chimica Acta.2025; 574: 120336.     CrossRef
  • Typing of clinical and reference strains of Saccharomyces cerevisiae using pulsed-field gel electrophoresis and MALDI-TOF MS
    Justyna Cieślik, Zofia Bakuła, Katarzyna Roeske, Aleksandra Kuryłek, Alicja Okrasińska, Jacek Bielecki, Marta Wróblewska, Tomasz Jagielski
    Scientific Reports.2025;[Epub]     CrossRef
  • Salmonella spp. detection in fresh and freeze-dried frog meat: a comparison of methods
    SILVIA CONCEIÇÃO R.P. MELLO, ROSSIANE M. DE SOUZA, ELIANE RODRIGUES, FERNANDO DAVID CARACUSCHANSK, BEATRIZ V. MENDES, ELIANA DE FÁTIMA M. DE MESQUITA
    Anais da Academia Brasileira de Ciências.2025;[Epub]     CrossRef
  • Assessment of MALDI-TOF MS for the identification of cultural heritage insect pests
    Dikra Hamadouche, Adama Zan Diarra, Fabien Fohrer, Jean-Michel Bérenger, Ahmed Benakhla, Lionel Almeras, Philippe Parola
    International Biodeterioration & Biodegradation.2025; 199: 106033.     CrossRef
  • Reactive oxygen species as quantitative indicator of antibiotic resistance in environmental bacteria
    Shunyi Zhou, Huijie Lu, Shuyan Wang, Lizhong Zhu
    Journal of Environmental Sciences.2025;[Epub]     CrossRef
  • Isoelectric Focusing Fractionation Method for Signal Enhancement in Detection of Inactivated Biological Agents Using Matrix‐Assisted Laser Desorption/Ionization Mass Spectrometry
    Filip Duša, Jiří Šalplachta, Marie Horká, Kamila Lunerová, Veronika Čermáková, Michal Dřevínek, Oldřich Kubíček
    ELECTROPHORESIS.2025; 46(3-4): 212.     CrossRef
  • Empreintes de spectrométrie de masse appliquées à l'étude des culicidés
    Rym Bouledroua, Dikra Hamadouche, Zaina Amirat, Lionel Alméras
    Revue Francophone des Laboratoires.2025; 2025(570): 34.     CrossRef
  • Isolation, identification, culture, extraction of natural compounds from microbes derived from fruit and vegetable wastes, and biological activity screening: A systematic review and meta-analysis
    Shreyasi Ray, Aishik Banerjee, Debasmita Paul, Soumyadeep Paul, Biplab Debnath, Shaileyee Das
    Next Research.2025; 2(3): 100627.     CrossRef
  • Artificial intelligence-empowered imaging technologies for biofilm static characterization and dynamic monitoring
    Shuqun Li, Yao Lu, Chujin Ruan, Hongchen Shen, Miaoxiao Wang, Huichun Zhang, Chen Qian, Dongsheng Wang, Pedro J.J. Alvarez, Pingfeng Yu
    Chemical Engineering Journal.2025; 522: 167592.     CrossRef
  • Role of the P2X7 receptor in intestinal inflammation due to infection with the oral pathogen Porphyromonas gingivalis
    Lorraine Oliveira-Cruz, Nayara Carvalho-Barbosa, Fabiana Cristina-Rodrigues, Thaís N. Côrtes, Kamila Guimarães-Pinto, André L. Amorim da Costa, Isadora S. de Lima, Talita G.B. Lourenço, Archimedes B. Castro-Junior, Alessandra D. Almeida Filardy, Ana Paula
    Life Sciences.2025; 380: 123971.     CrossRef
  • Risk of oral candidiasis: profile analysis of patients admitted to the dermatology clinic of a tertiary hospital in southeast of Brazil
    Ana Maria Hoyos Cadavid, Viviane Mazo Favero Gimenes, Vera Lúcia Teixeira de Freitas, Sonia Cristina Cavalcante, Lumena Pereira Machado Siqueira, Caroline Evelin Moraes Palomar, Ricardo Spina Nunes, Marcello Menta Simonsen Nico, Silvia Vanessa Lourenço
    Revista do Instituto de Medicina Tropical de São Paulo.2025;[Epub]     CrossRef
  • Pioneering Klebsiella Pneumoniae Antibiotic Resistance Prediction With Artificial Intelligence-Clinical Decision Support System–Enhanced Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry: Retrospective Study
    Ming-Jr Jian, Tai-Han Lin, Hsing-Yi Chung, Chih-Kai Chang, Cherng-Lih Perng, Feng-Yee Chang, Hung-Sheng Shang
    Journal of Medical Internet Research.2024; 26: e58039.     CrossRef
  • Feasibility of Biomarker-Based Taxonomic Classification: A Case Study of the Marine Red Alga Laurencia snackeyi (Weber Bosse) M. Masuda
    Boon Ful Ng, Wei Lun Ng, Wai Mun Lum, Swee Keong Yeap, Yoong Soon Yong
    Phycology.2024; 4(3): 363.     CrossRef
  • Artificial Intelligence-Clinical Decision Support System in Infectious Disease Control: Combatting Multidrug-Resistant Klebsiella pneumoniae with Machine Learning
    Ming-Jr Jian, Tai-Han Lin, Hsing-Yi Chung, Chih-Kai Chang, Cherng-Lih Perng, Feng-Yee Chang, Hung-Sheng Shang
    Infection and Drug Resistance.2024; Volume 17: 2899.     CrossRef
  • Investigate the relationship between Bacillus coagulans and its inhibition of chemotherapy‐induced lung cancer resistance
    Yu‐Shan Ting, Yi‐Shiuan Wang, En‐Chi Liao, Hsiu‐Chuan Chou, Hong‐Lin Chan
    Biotechnology and Applied Biochemistry.2024; 71(6): 1453.     CrossRef
  • Probe‐based mass spectrometry approaches for single‐cell and single‐organelle measurements
    Daniel C. Castro, Peter Chan‐Andersen, Elena V. Romanova, Jonathan V. Sweedler
    Mass Spectrometry Reviews.2024; 43(4): 888.     CrossRef
  • Revealing the genetic traits of the foodborne microbial genus Hafnia: Implications for the human gut microbiome
    Federico Fontana, Giulia Longhi, Elisa Carli, Giulia Alessandri, Leonardo Mancabelli, Gabriele Andrea Lugli, Chiara Tarracchini, Alice Viappiani, Rosaria Anzalone, Francesca Turroni, Christian Milani, Marco Ventura
    Environmental Microbiology.2024;[Epub]     CrossRef
  • Factors affecting the quality and reproducibility of MALDI-TOF MS identification for human Capnocytophaga species
    Ahmed Algahawi, Inka Harju, Eija Könönen, Kaisu Rantakokko-Jalava, Mervi Gürsoy
    Journal of Microbiological Methods.2024; 220: 106911.     CrossRef
  • Identification of Escherichia coli strains using MALDI-TOF MS combined with long short-term memory neural networks
    Qiqi Mao, Xie Zhang, Zeping Xu, Ya Xiao, Yufei Song, Feng Xu
    Aging.2024; 16(13): 11018.     CrossRef
  • Rapid bacterial identification through volatile organic compound analysis and deep learning
    Bowen Yan, Lin Zeng, Yanyi Lu, Min Li, Weiping Lu, Bangfu Zhou, Qinghua He
    BMC Bioinformatics.2024;[Epub]     CrossRef
  • Artificial intelligence-clinical decision support system for enhanced infectious disease management: Accelerating ceftazidime-avibactam resistance detection in Klebsiella pneumoniae
    Tai-Han Lin, Hsing-Yi Chung, Ming-Jr Jian, Chih-Kai Chang, Hung-Hsin Lin, Ching-Mei Yu, Cherng-Lih Perng, Feng-Yee Chang, Chien-Wen Chen, Chun-Hsiang Chiu, Hung-Sheng Shang
    Journal of Infection and Public Health.2024; 17(10): 102541.     CrossRef
  • MSProfileR: An Open-Source Software for Quality Control of Matrix-Assisted Laser Desorption Ionization–Time of Flight Spectra
    Refka Ben Hamouda, Bertrand Estellon, Khalil Himet, Aimen Cherif, Hugo Marthinet, Jean-Marie Loreau, Gaëtan Texier, Samuel Granjeaud, Lionel Almeras
    Informatics.2024; 11(2): 39.     CrossRef
  • Innovative strategies against superbugs: Developing an AI-CDSS for precise Stenotrophomonas maltophilia treatment
    Tai-Han Lin, Hsing-Yi Chung, Ming-Jr Jian, Chih-Kai Chang, Hung-Hsin Lin, Ching-Mei Yu, Cherng-Lih Perng, Feng-Yee Chang, Chien-Wen Chen, Hung-Sheng Shang
    Journal of Global Antimicrobial Resistance.2024; 38: 173.     CrossRef
  • MALDI-TOF MS analysis for detection of bovine coronavirus with tryptic peptides from viral proteins
    KATSUHIKO HAYASHI, KENJI OHYA, TOMOYA YOSHINARI, SHOUHEI HIROSE, SOUTA SHIMIZU, YUJI MORITA, TAKAHIRO OHNISHI, MAIKO WATANABE, SATOSHI TAHARAGUCHI, HIROHISA MEKATA, TAKAHIDE TANIGUCHI, YUKIKO HARA-KUDO
    Journal of Microorganism Control.2024; 29(4): 143.     CrossRef
  • How to Analyze the Diversity of Glycans
    Hiroshi HINOU
    KAGAKU TO SEIBUTSU.2024; 62(8): 393.     CrossRef
  • Evaluation of the Zybio EXS3000 mass spectrometry in routine identification of Clinical isolates
    Song Li, Dexing Han, Xiaowei Chen, Dexiang Zheng, Yimei Cai, Dongling Lin, Xuan Zhang, Peifeng Ke, Pinghua Qu, Cha Chen
    Heliyon.2023; 9(8): e18990.     CrossRef
  • Evaluating the microcystin-LR-degrading potential of bacteria growing in extreme and polluted environments
    Thabile Lukhele, Titus Alfred Makudali Msagati
    Archives of Microbiology.2023;[Epub]     CrossRef
  • Diagnostic test accuracy of an automated device for the MALDI target preparation for microbial identification
    Abdessalam Cherkaoui, Arnaud Riat, Gesuele Renzi, Adrien Fischer, Jacques Schrenzel
    European Journal of Clinical Microbiology & Infectious Diseases.2023; 42(2): 153.     CrossRef
  • Sample preparation and culture condition effects on MALDI‐TOF MS identification of bacteria: A review
    Natalija Topić Popović, Snježana P. Kazazić, Krunoslav Bojanić, Ivančica Strunjak‐Perović, Rozelindra Čož‐Rakovac
    Mass Spectrometry Reviews.2023; 42(5): 1589.     CrossRef
  • Biofilm formation risk assessment for psychrotrophic Pseudomonas in raw milk by MALDI-TOF mass spectrometry
    Minghui Yan, Liwen Luo, Dandan Li, Zhenmin Liu, Ran Wei, Jia Yi, Liang Qiao, Chunping You
    LWT.2023; 176: 114508.     CrossRef
  • Oral Microbiota—One Habitat or Diverse Niches? A Pilot Study of Sampling and Identification of Oral Bacterial and Fungal Biota in Patients with Type I Diabetes Mellitus Treated with Insulin Pump
    Iwona Gregorczyk-Maga, Mateusz Fiema, Michal Kania, Estera Jachowicz-Matczak, Dorota Romaniszyn, Karolina Gerreth, Tomasz Klupa, Jadwiga Wójkowska-Mach
    International Journal of Environmental Research and Public Health.2023; 20(3): 2252.     CrossRef
  • Systematic review–how do we identify urinary tract infections today?
    Čeprnja Marina, Oros Damir, Janeš Andrea, Žučko Jurica, Barišić Karmela, Škrlin Jasenka, Starčević Antonio
    Open Journal of Bacteriology.2023; 7(1): 001.     CrossRef
  • Machine learning combined with MALDI-TOF MS has the potential ability to identify serotypes of the avian pathogenRiemerella anatipestifer
    Zhuohao Wang, Xiangkuan Zheng, Jin Chen, Zhengjun Xu, Yongyi Dong, Guoxin Xu, Long Chen, Wei Zhang
    Journal of Applied Microbiology.2023;[Epub]     CrossRef
  • Illuminating the oral microbiome and its host interactions: recent advancements in omics and bioinformatics technologies in the context of oral microbiome research
    Jonathon L Baker
    FEMS Microbiology Reviews.2023;[Epub]     CrossRef
  • The transmittable through stinging microbiota differs between honeybees and wasps: a potentially greater microbial risk of the wasp sting for humans
    Ioanna Gkitsaki, Alexandros Papachristoforou, Sofia Michailidou, Nikolaos Karamvalis, Ioannis Iliadis, Dimitra Graikini, Christina Sakarikou, Evangelos Tsoukis, Anagnostis Argyriou, Efstathios Giaouris
    International Microbiology.2023; 26(3): 663.     CrossRef
  • Recent Advances in Mass Spectrometry-Based Spatially Resolved Molecular Imaging of Drug Disposition and Metabolomics
    Yu Chen, Ying Liu, Ximei Li, Yan He, Weiwei Li, Ying Peng, Jiang Zheng
    Drug Metabolism and Disposition.2023; 51(10): 1273.     CrossRef
  • Identification of Vibrio metschnikovii and Vibrio injensis Isolated from Leachate Ponds: Characterization of Their Antibiotic Resistance and Virulence-Associated Genes
    Aura Falco, Miguel Ángel Villaquirán-Muriel, José David Gallo Pérez, Alejandra Mondragón-Quiguanas, Carlos Aranaga, Adriana Correa
    Antibiotics.2023; 12(11): 1571.     CrossRef
  • Recent studies on advance spectroscopic techniques for the identification of microorganisms: A review
    Muhammad Ramzan, Ali Raza, Zaib un Nisa, Syed Ghulam Musharraf
    Arabian Journal of Chemistry.2023; 16(3): 104521.     CrossRef
  • A comprehensive review of microbial contamination in the indoor environment: sources, sampling, health risks, and mitigation strategies
    Hitikk Chawla, Purnima Anand, Kritika Garg, Neeru Bhagat, Shivani G. Varmani, Tanu Bansal, Andrew J. McBain, Ruchi Gulati Marwah
    Frontiers in Public Health.2023;[Epub]     CrossRef
  • Molecular epidemiology of antimicrobial-resistant Pseudomonas aeruginosa in a veterinary teaching hospital environment
    Jeerawat Soonthornsit, Kotchawan Pimwaraluck, Noppakhun Kongmuang, Ploy Pratya, Nathita Phumthanakorn
    Veterinary Research Communications.2023; 47(1): 73.     CrossRef
  • Topical issues of antibiotic resistance: modern methods of identification of bacterial pathogens and determination of their qualities
    E. S. Starikova, S. G. Fominykh
    Scientific Bulletin of the Omsk State Medical University.2023; 3(4): 82.     CrossRef
  • Potential Probiotic Lactic Acid Bacteria with Anti-Penicillium expansum Activity from Different Species of Tunisian Edible Snails
    Ghada Rabaoui, Fernando Sánchez-Juanes, Mohamed Tebini, Karim Naghmouchi, Juan Luis Muñoz Bellido, Kamel Ben-Mahrez, Samia Réjiba
    Probiotics and Antimicrobial Proteins.2023; 15(1): 82.     CrossRef
  • Airborne transmission of biological agents within the indoor built environment: a multidisciplinary review
    Christos D. Argyropoulos, Vasiliki Skoulou, Georgios Efthimiou, Apostolos K. Michopoulos
    Air Quality, Atmosphere & Health.2023; 16(3): 477.     CrossRef
  • A Single-Laboratory Performance Evaluation of MALDI-TOF MS in Rapid Identification of Staphylococcus aureus, Cronobacter sakazakii, Vibrio parahaemolyticus, and Some Closely Related Bacterial Species of Public Health Importance
    Irshad M Sulaiman, Nancy Miranda, Whitney Hook, Joseph Mendoza, Quincy Kumfert, Tamayo Barnes, Kidon Sung, Saeed Khan, Mohamed Nawaz, Pratik Banerjee, Steven Simpson, Kevin Karem
    Journal of AOAC International.2023; 106(6): 1574.     CrossRef
  • Analysis of Bacterial Pathogens Causing Complicating HAP in Patients with Secondary Peritonitis
    Josef Chudáček, Petr Špička, Milan Kolar, Martin Stašek, Štefan Kolcún, Dušan Klos, Kristýna Hricová, Patrik Mlynarcik, Vendula Pudová, Olga Klementová, Rostislav Horáček
    Antibiotics.2023; 12(3): 527.     CrossRef
  • Comparison of Autof Ms1000 and EXS3000 MALDI-TOF MS Platforms for Routine Identification of Microorganisms
    Lijuan Xiong, Xu Long, Lijun Ni, Lili Wang, Yang Zhang, Lili Cui, Jian Guo, Chunying Yang
    Infection and Drug Resistance.2023; Volume 16: 913.     CrossRef
  • A novel biochemistry approach combined with MALDI-TOF MS to discriminate Escherichia coli and Shigella species
    Tianyi Li, Qinghua Zou, Binghua Zhang, Di Xiao
    Analytica Chimica Acta.2023; 1284: 341967.     CrossRef
  • A Graphene-Coated Silicon Wafer Plate Improves the Sensitivity and Reproducibility of MALDI-TOF MS Analysis of Proteins
    Yoon Kyung Choi, Dong Huey Cheon, Won Suk Yang, Je-Hyun Baek
    Journal of the American Society for Mass Spectrometry.2023; 34(9): 2034.     CrossRef
  • A novel strategy for screening mutations in the voltage-gated sodium channel gene of Aedes albopictus based on multiplex PCR-mass spectrometry minisequencing technology
    Qunzheng Mu, Xin Zhao, Fengfeng Li, Wenyu Li, Xinxin Zhou, Xinchang Lun, Yiguan Wang, Dongdong Hua, Qiyong Liu, Di Xiao, Fengxia Meng
    Infectious Diseases of Poverty.2023;[Epub]     CrossRef
  • Comparison of Small Biomolecule Ionization and Fragmentation in Pseudomonas aeruginosa Using Common MALDI Matrices
    Nathan C. Wamer, Chase N. Morse, Jennifer N. Gadient, Taylor A. Dodson, Eric A. Carlson, Erin G. Prestwich
    Journal of the American Society for Mass Spectrometry.2023; 34(3): 355.     CrossRef
  • Bacterial diversity analysis of coastal superficial seawaters near aquaculture facilities, using MALDI-TOF approach and Ribopeaks database
    Jorge Freitas, Rosa Perestrelo, Paulo Vaz-Pires, José S. Câmara
    Aquaculture.2022; 556: 738263.     CrossRef
  • Application of MALDI-TOF MS for identification of environmental bacteria: A review
    Mohammad Y. Ashfaq, Dana A. Da'na, Mohammad A. Al-Ghouti
    Journal of Environmental Management.2022; 305: 114359.     CrossRef
  • MALDI-Based Mass Spectrometry in Clinical Testing: Focus on Bacterial Identification
    Sachio Tsuchida, Tomohiro Nakayama
    Applied Sciences.2022; 12(6): 2814.     CrossRef
  • Rummeliibacillus suwonensis: First Time Isolation from Human Feces by Culturomics
    Gianluca Quaranta, Jessica Mandrioli, Stefano Bibbò, Alessandra Guarnaccia, Giovanni Fancello, Cecilia Simonini, Amedeo Amedei, Elena Niccolai, Giulia Nannini, Giovanni Cammarota, Maurizio Sanguinetti, Luca Masucci
    Current Microbiology.2022;[Epub]     CrossRef
  • Limitations of matrix-assisted laser desorption/ionization time-of-flight mass spectrometry for the identification of Aspergillus species
    Jin Shao, Qiqi Wang, Linwei Wei, Zhe Wan, Ruoyu Li, Jin Yu
    Medical Mycology.2022;[Epub]     CrossRef
  • Identification of ticks from an old collection by MALDI-TOF MS
    Saidou Ahamada M'madi, Adama Zan Diarra, Lionel Almeras, Philippe Parola
    Journal of Proteomics.2022; 264: 104623.     CrossRef
  • Recent Advances and Potential Future Applications of MALDI-TOF Mass Spectrometry for Identification of Helminths
    Issa Sy, Lucie Conrad, Sören L. Becker
    Diagnostics.2022; 12(12): 3035.     CrossRef
  • Clostridium subterminale infection in a patient with diffuse large B-cell lymphoma and haemophagocytic syndrome: A case report and literature review
    Ying Zhou, Sheng Wang, Xing-bei Weng
    Journal of International Medical Research.2022;[Epub]     CrossRef
  • Differentiating between Enterococcusfaecium and Enterococcuslactis by Matrix-Assisted Laser Desorption Ionization Time-of-Flight Mass Spectrometry
    Eiseul Kim, Seung-Min Yang, Hyun-Jae Kim, Hae-Yeong Kim
    Foods.2022; 11(7): 1046.     CrossRef
  • Classification of Environmental Strains from Order to Genus Levels Using Lipid and Protein MALDI-ToF Fingerprintings and Chemotaxonomic Network Analysis
    Marceau Levasseur, Téo Hebra, Nicolas Elie, Vincent Guérineau, David Touboul, Véronique Eparvier
    Microorganisms.2022; 10(4): 831.     CrossRef
  • Application of Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry for the Rapid Identification of Yeast Species From Polar Regions
    Chenyang He, Jianju Feng, Jing Su, Tao Zhang, Liyan Yu
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • MALDI-TOF MS database expansion for identification of Bacillus and related genera isolated from a pharmaceutical facility
    Luciana Veloso da Costa, Rebeca Vitoria da Silva Lage de Miranda, Cristhiane Moura Falavina dos Reis, Joyce Modesto de Andrade, Fernanda Ventura Cruz, Adriana Marques Frazão, Erica Louro da Fonseca, Juliana Nunes Ramos, Marcelo Luiz Lima Brandão, Verônica
    Journal of Microbiological Methods.2022; 203: 106625.     CrossRef
  • Production of mannosylerythritol lipids: biosynthesis, multi-omics approaches, and commercial exploitation
    Stefany Solano-González, Frank Solano-Campos
    Molecular Omics.2022; 18(8): 699.     CrossRef
  • Ion Addition by Electrolysis to Improve the Quantitative Analysis of Bacteria with MALDI-TOF MS
    Chaoying Zhang, Zengnan Wu, Xinchang Gao, Xia Wang, Haifang Li, Jin-Ming Lin
    Analytical Chemistry.2022;[Epub]     CrossRef
  • Development of high-resolution multidimensional native protein microfluidic chip electrophoresis fingerprinting and its application in the quick analysis of unknown microorganisms
    Zongliang Quan, Yu Chen, Xiaochao Zhao, Shiyong Yu, Yongrui Li, Yuanqing Xu, Jiandong Xu, Hui Chen, Lina Geng, Yulin Deng
    Journal of Chromatography A.2022; 1665: 462797.     CrossRef
  • Prevalence and Characteristics of Carriage of Neisseria meningitidis Among Young Israeli Adults
    Noa Sofer-Sali, Diana Roif-Kaminsky, Yair Motro, Boris Khalfin, Eva Avramovich, Inbal Galor, Amir Shlaifer, Adir Sommer, Ran Rutenberg, Yacov Sachter, Avraham Yitzhak, Daniel Grupel, Jacob Moran-Gilad
    Open Forum Infectious Diseases.2022;[Epub]     CrossRef
  • MALDI-TOF MS: application in diagnosis, dereplication, biomolecule profiling and microbial ecology
    Najeebul Tarfeen, Khair Ul Nisa, Qadrul Nisa
    Proceedings of the Indian National Science Academy.2022; 88(3): 277.     CrossRef
  • MALDI-TOF Mass Spectrometry Analysis and Human Post-Mortem Microbial Community: A Pilot Study
    Carlo Pietro Campobasso, Gennaro Mastroianni, Alessandro Feola, Pasquale Mascolo, Anna Carfora, Bruno Liguori, Pierluca Zangani, Federica Dell’Annunziata, Veronica Folliero, Arianna Petrillo, Maria Elena Della Pepa, Francesca Martora, Marilena Galdiero
    International Journal of Environmental Research and Public Health.2022; 19(7): 4354.     CrossRef
  • Evaluation of Autof MS 1000 and Vitek MS MALDI-TOF MS System in Identification of Closely-Related Yeasts Causing Invasive Fungal Diseases
    Qiaolian Yi, Meng Xiao, Xin Fan, Ge Zhang, Yang Yang, Jing-Jia Zhang, Si-Meng Duan, Jing-Wei Cheng, Ying Li, Meng-Lan Zhou, Shu-Ying Yu, Jing-Jing Huang, Xin-Fei Chen, Xin Hou, Fanrong Kong, Timothy Kudinha, Ying-Chun Xu
    Frontiers in Cellular and Infection Microbiology.2021;[Epub]     CrossRef
  • In vivo antimicrobial activity of 0.6% povidone-iodine eye drops in patients undergoing intravitreal injections: a prospective study
    Daniele Tognetto, Marco R. Pastore, Lorenzo Belfanti, Riccardo Merli, Alex L. Vinciguerra, Marina Busetti, Giulia Barbati, Gabriella Cirigliano
    Scientific Reports.2021;[Epub]     CrossRef
  • Instrumental analytical tools for mycobacteria characterisation
    Veronika Ozana, Karel Hruška
    Czech Journal of Food Sciences.2021; 39(4): 235.     CrossRef
  • Acid and aluminium-tolerant microbes isolated from China space station assembly cleanroom surfaces and identified by 16S rRNA/ITS sequencing and MALDI-TOF MS
    Nino Rcheulishvili, Dimitri Papukashvili, Yasmeen Shakir, Yulin Deng, Ying Zhang
    International Journal of Astrobiology.2021; 20(2): 133.     CrossRef
  • Capture and detection of urine bacteria using a microchannel silicon nanowire microfluidic chip coupled with MALDI-TOF MS
    Yuexin Li, Tao Wang, Jianmin Wu
    The Analyst.2021; 146(4): 1151.     CrossRef
  • Differentiation of Gastric Helicobacter Species Using MALDI-TOF Mass Spectrometry
    Helena Berlamont, Chloë De Witte, Sofie De Bruyckere, James G. Fox, Steffen Backert, Annemieke Smet, Filip Boyen, Freddy Haesebrouck
    Pathogens.2021; 10(3): 366.     CrossRef
  • Deep convolutional neural network: a novel approach for the detection of Aspergillus fungi via stereomicroscopy
    Haozhong Ma, Jinshan Yang, Xiaolu Chen, Xinyu Jiang, Yimin Su, Shanlei Qiao, Guowei Zhong
    Journal of Microbiology.2021; 59(6): 563.     CrossRef
  • Asynchronous parallel Bayesian optimization for AI-driven cloud laboratories
    Trevor S Frisby, Zhiyun Gong, Christopher James Langmead
    Bioinformatics.2021; 37(Supplement): i451.     CrossRef
  • The distribution of cultivable oral anaerobic microbiota identified by MALDI-TOF MS in healthy subjects and in patients with periodontal disease
    Yu-Shan Wei, Yi-Ru Chang, Yi-Ting Tsai, Yi-Ting Yang, Shang-Hui Weng, Lin-Fang Tseng, Hsiu-Chuan Chou, Alice Tinyu Hu, En-Chi Liao, Hsin-Yi Chen, Guan-Yu Lin, Wen-Chi Cheng, Hong-Lin Chan
    Journal of Pharmaceutical and Biomedical Analysis.2021; 192: 113647.     CrossRef
  • Exploration of tissue distribution of ginsenoside Rg1 by LC-MS/MS and nanospray desorption electrospray ionization mass spectrometry
    Wenlong Wei, Zhenwei Li, Haojv Li, Yaling An, Hua Qu, Changliang Yao, Jianqing Zhang, Jiayuan Li, Gaole Zhang, Yanchao Shi, De-an Guo
    Journal of Pharmaceutical and Biomedical Analysis.2021; 198: 113999.     CrossRef
  • Evaluation of three sample preparation methods for the identification of clinical strains by using two MALDI‐TOF MS systems
    Jinghua Wang, Hualiang Wang, Keya Cai, Peijuan Yu, Yajuan Liu, Gaoling Zhao, Rong Chen, Rong Xu, Maowen Yu
    Journal of Mass Spectrometry.2021;[Epub]     CrossRef
  • Modern Analytical Techniques for Detection of Bacteria in Surface and Wastewaters
    Alexandra Canciu, Mihaela Tertis, Oana Hosu, Andreea Cernat, Cecilia Cristea, Florin Graur
    Sustainability.2021; 13(13): 7229.     CrossRef
  • Rare Lelliottia nimipressuralis from a wound infection case report using whole genome sequencing-based bacterial identification
    Hosoon Choi, Munok Hwang, Piyali Chatterjee, Chetan Jinadatha, Dhammika H. Navarathna
    Diagnostic Microbiology and Infectious Disease.2021; 101(4): 115538.     CrossRef
  • Cultivation and Genomic Characterization of the Bile Bacterial Species From Cholecystitis Patients
    Qiulong Yan, Siyi Zhang, Shenghui Li, Guangyang Wang, Aiqin Zhang, Taiyang Jin, Yue Zhang, Qingbo Lv, Manchun Xiao, Yuanyuan Sun, Xiang Li, Song Cui, Rui Li, Xiaochi Ma, Chao Wang, Xiangge Tian, Xiaohui Duan, Yi Xin, Xianhai Mao, Yufang Ma
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Establishment and Application of Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry for Detection of Shewanella Genus
    Keyi Yu, Zhenzhou Huang, Ying Li, Qingbo Fu, Lirong Lin, Shiyao Wu, Hang Dai, Hongyan Cai, Yue Xiao, Ruiting Lan, Duochun Wang
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Proteomic and microbial assessments on the effect of Antrodia cinnamomea in C57BL/6 mice
    Yi-Ting Tsai, Jhen-Wei Ruan, Cherng-Shyang Chang, Mei-Lan Ko, Hsiu-Chuan Chou, Chi-Chien Lin, Chiao-Mei Lin, Chih-Ting Huang, Yu-Shan Wei, En-Chi Liao, Hsin-Yi Chen, Li-Hsun Lin, Meng-Wei Lin, Cheng-Yuan Kao, Hong-Lin Chan
    Archives of Biochemistry and Biophysics.2021; 713: 109058.     CrossRef
  • A Novel Strategy for the Detection of SARS-CoV-2 Variants Based on Multiplex PCR-Mass Spectrometry Minisequencing Technology
    Fei Zhao, Jinxing Lu, Bing Lu, Tian Qin, Xuemei Wang, Xuexin Hou, Fanliang Meng, Xiaona Xu, Tianyi Li, Haijian Zhou, Jianzhong Zhang, Biao Kan, Ying Huang, Zehui Zhang, Di Xiao, Hui Wang
    Microbiology Spectrum.2021;[Epub]     CrossRef
  • Identification of Aspergillus Conidia in Bronchoalveolar Lavage Using Offline Combination of Capillary Electrophoresis in Supercritical Water-Treated Fused Silica Capillary and Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry
    Jiří Šalplachta, Marie Horká, Pavel Karásek, Filip Růžička, Michal Roth
    Analytical Chemistry.2020; 92(11): 7588.     CrossRef
  • Evaluation of the Autof MS1000 mass spectrometer in the identification of clinical isolates
    Qiong Ma, Qi Zhang, Youhua Yuan, Wenjuan Yan, Shanmei Wang, Junhong Xu, Jiangfeng Zhang, Yuming Wang, Yi Li
    BMC Microbiology.2020;[Epub]     CrossRef
  • Novel specific peaks for differentiating the Lactobacillus plantarum group using matrix-assisted laser desorption ionization time-of-flight mass spectrometry
    Eiseul Kim, Seung-Min Yang, Hyeon-Be Kim, Hae-Yeong Kim
    Journal of Microbiological Methods.2020; 178: 106064.     CrossRef
  • Rapid differentiation of Campylobacter jejuni cell wall mutants using Raman spectroscopy, SERS and mass spectrometry combined with chemometrics
    Malama Chisanga, Dennis Linton, Howbeer Muhamadali, David I. Ellis, Richard L. Kimber, Aleksandr Mironov, Royston Goodacre
    The Analyst.2020; 145(4): 1236.     CrossRef
  • Novel Strategy for Rapidly and Safely Distinguishing Bacillus anthracis and Bacillus cereus by Use of Peptide Mass Fingerprints Based on Matrix-Assisted Laser Desorption Ionization–Time of Flight Mass Spectrometry
    Jianchun Wei, Huijuan Zhang, Huifang Zhang, Enmin Zhang, Binghua Zhang, Fei Zhao, Di Xiao, Erin McElvania
    Journal of Clinical Microbiology.2020;[Epub]     CrossRef
  • Efficacy of low energy electron beam on microbial decontamination of spices
    Urszula Gryczka, Hiromi Kameya, Keitarou Kimura, Setsuko Todoriki, Wojciech Migdał, Sylwester Bułka
    Radiation Physics and Chemistry.2020; 170: 108662.     CrossRef
  • Identification of hyperglycemia-associated microbiota alterations in saliva and gingival sulcus
    Yu-Shan Wei, Ya-Chun Hsiao, Guan-Wei Su, Yi-Ru Chang, Hsiu-Pin Lin, Yi-Shiuan Wang, Yi-Ting Tsai, En-Chi Liao, Hsin-Yi Chen, Hsiu-Chuan Chou, Mei-Lan Ko, Wen-Hung Kuo, Shing-Jyh Chang, Wen-Chi Cheng, Hong-Lin Chan
    Archives of Biochemistry and Biophysics.2020; 682: 108278.     CrossRef
  • Recent update in diagnosis and treatment of human pythiosis
    Maria Nina Chitasombat, Passara Jongkhajornpong, Kaevalin Lekhanont, Theerapong Krajaejun
    PeerJ.2020; 8: e8555.     CrossRef
  • Application of MALDI-TOF MS for Rapid Identification of Microorganisms in Food Microbiology
    Hiroko Kawasaki
    Japanese Journal of Food Microbiology.2020; 37(4): 165.     CrossRef
  • MALDI-TOF mass spectrometry typing for predominant serovars of non-typhoidal Salmonella in a Thai broiler industry
    Suthee Mangmee, Onrapak Reamtong, Thareerat Kalambaheti, Sittiruk Roytrakul, Piengchan Sonthayanon
    Food Control.2020; 113: 107188.     CrossRef
  • Spontaneous bacterial peritonitis caused by Campylobacter Coli in cirrhotic patient
    Cheng-Hui Wang, Ting-Han Tai, Shih-Yen Weng, Shin-Wen Yeh, Sheng-Jie Shiue, Ganbolor Jargalsaikhan, Ming-Shun Wu
    Medicine.2020; 99(21): e19887.     CrossRef
  • Rapid screening of marine bacterial symbionts using MALDI-TOF MS
    Livia M. R. Vidal, Tainá M. Venas, Aline R. P. Gonçalves, Hannah K. Mattsson, Raphael V. P. Silva, Maria S. Nóbrega, Gustavo P. R. Azevedo, Gizele D. Garcia, Diogo A. Tschoeke, Verônica V. Vieira, Fabiano L. Thompson, Cristiane C. Thompson
    Archives of Microbiology.2020; 202(8): 2329.     CrossRef
  • Identification of pathogens from native urine samples by MALDI-TOF/TOF tandem mass spectrometry
    Damir Oros, Marina Ceprnja, Jurica Zucko, Mario Cindric, Amela Hozic, Jasenka Skrlin, Karmela Barisic, Ena Melvan, Ksenija Uroic, Blazenka Kos, Antonio Starcevic
    Clinical Proteomics.2020;[Epub]     CrossRef
  • Sensitive detection of quinoline-derivatized sitagliptin in small volumes of human plasma by MALDI-TOF mass spectrometry
    Yi-Shan Li, Wei-Lung Tseng, Chi-Yu Lu
    Talanta.2020; 218: 121143.     CrossRef
  • The management of anti-infective agents in intensive care units: the potential role of a ‘fast’ pharmacology
    Dario Cattaneo, Alberto Corona, Francesco Giuseppe De Rosa, Cristina Gervasoni, Danijela Kocic, Deborah Je Marriott
    Expert Review of Clinical Pharmacology.2020; 13(4): 355.     CrossRef
  • Identification of bacteria in juice/lettuce using magnetic nanoparticles and selected reaction monitoring mass spectrometry
    Cheng-Tung Chen, Je-Wei Yu, Yen-Peng Ho
    Journal of Food and Drug Analysis.2019; 27(2): 575.     CrossRef
  • Application of the Whole Genome-Based Bacterial Identification System, TrueBac ID, Using Clinical Isolates That Were Not Identified With Three Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry (MALDI-TOF MS) Systems
    Sung-Min Ha, Chang Ki Kim, Juhye Roh, Jung-Hyun Byun, Seung-Jo Yang, Seon-Bin Choi, Jongsik Chun, Dongeun Yong
    Annals of Laboratory Medicine.2019; 39(6): 530.     CrossRef
  • Antimicrobial random peptide cocktails: a new approach to fight pathogenic bacteria
    Zaid Amso, Zvi Hayouka
    Chemical Communications.2019; 55(14): 2007.     CrossRef
  • Application of MALDI Biotyper System for Rapid Identification of Bacteria Isolated from a Fresh Produce Market
    Israa Mohamad El-Nemr, Mohanad Mushtaha, Sathyavathi Sundararaju, Charmaine Fontejon, Mohammed Suleiman, Patrick Tang, Ipek Goktepe, Mohammad Rubayet Hasan
    Current Microbiology.2019; 76(3): 290.     CrossRef
  • Identification of dermatophytes by MALDI-TOF MS technology in the clinical laboratory
    Maya Azrad, Victoria Freidus, Riad Kassem, Avi Peretz
    International Journal of Mass Spectrometry.2019; 440: 32.     CrossRef
  • Differences between Staphylococcus aureus lineages isolated from ovine and caprine mastitis but not between isolates from clinical or subclinical mastitis
    J. Hoekstra, V.P.M.G. Rutten, M. van den Hout, M.P. Spaninks, L. Benedictus, G. Koop
    Journal of Dairy Science.2019; 102(6): 5430.     CrossRef
  • MALDI–MS Profiling to Address Honey Bee Health Status under Bacterial Challenge through Computational Modeling
    Karim Arafah, Sébastien Nicolas Voisin, Victor Masson, Cédric Alaux, Yves Le Conte, Michel Bocquet, Philippe Bulet
    PROTEOMICS.2019;[Epub]     CrossRef
  • Rapid Antimicrobial Susceptibility Testing of Patient Urine Samples Using Large Volume Free-Solution Light Scattering Microscopy
    Manni Mo, Yunze Yang, Fenni Zhang, Wenwen Jing, Rafael Iriya, John Popovich, Shaopeng Wang, Thomas Grys, Shelley E. Haydel, Nongjian Tao
    Analytical Chemistry.2019; 91(15): 10164.     CrossRef
  • Advances in Chemical and Biological Methods to Identify Microorganisms—From Past to Present
    Ricardo Franco-Duarte, Lucia Černáková, Snehal Kadam, Karishma S. Kaushik, Bahare Salehi, Antonio Bevilacqua, Maria Rosaria Corbo, Hubert Antolak, Katarzyna Dybka-Stępień, Martyna Leszczewicz, Saulo Relison Tintino, Veruska Cintia Alexandrino de Souza, Ja
    Microorganisms.2019; 7(5): 130.     CrossRef
  • Rapid MALDI-TOF MS identification of commercial truffles
    Khalid El Karkouri, Carine Couderc, Philippe Decloquement, Annick Abeille, Didier Raoult
    Scientific Reports.2019;[Epub]     CrossRef
  • Association between a Genetic Risk Score Based on Single Nucleotide Polymorphisms of Coronary Artery Disease-Related Genes and Left Main Coronary Artery Disease
    Zhengxi Xu, Hanning Liu, Cheng Sun, Ke Si, Yan Zhao, Zhe Zheng
    BioMed Research International.2018; 2018: 1.     CrossRef
REVIEW] Transcriptional Regulatory Elements in Fungal Secondary Metabolism
Wenbing Yin , Nancy P. Keller
J. Microbiol. 2011;49(3):329-339.   Published online June 30, 2011
DOI: https://doi.org/10.1007/s12275-011-1009-1
  • 519 View
  • 1 Download
  • 115 Crossref
AbstractAbstract PDF
Filamentous fungi produce a variety of secondary metabolites of diverse beneficial and detrimental activities to humankind. The genes required for a given secondary metabolite are typically arranged in a gene cluster. There is considerable evidence that secondary metabolite gene regulation is, in part, by transcriptional control through hierarchical levels of transcriptional regulatory elements involved in secondary metabolite cluster regulation. Identification of elements regulating secondary metabolism could potentially provide a means of increasing production of beneficial metabolites, decreasing production of detrimental metabolites, aid in the identification of ‘silent’ natural products and also contribute to a broader understanding of molecular mechanisms by which secondary metabolites are produced. This review summarizes regulation of secondary metabolism associated with transcriptional regulatory elements from a broad view as well as the tremendous advances in discovery of cryptic or novel secondary metabolites by genomic mining.

Citations

Citations to this article as recorded by  
  • Spray-Induced Gene Silencing (SIGS) as a Tool for the Management of Pine Pitch Canker Forest Disease
    Irene Teresa Bocos-Asenjo, Huma Amin, Sandra Mosquera, Sergio Díez-Hermano, Mireille Ginésy, Julio Javier Diez, Jonatan Niño-Sánchez
    Plant Disease.2025; 109(1): 49.     CrossRef
  • Developing filamentous fungal chassis for natural product production
    Jie Fan, Peng-Lin Wei, Yuanyuan Li, Shengquan Zhang, Zedong Ren, Wei Li, Wen-Bing Yin
    Bioresource Technology.2025; 415: 131703.     CrossRef
  • Regulation and induction of fungal secondary metabolites: a comprehensive review
    Shaurya Prakash, Hemlata Kumari, Minakshi Sinha, Antresh Kumar
    Archives of Microbiology.2025;[Epub]     CrossRef
  • Unconventional semi-solid cultivation enhances cytochalasins production by the Colombian fungus Xylaria sp. CM-UDEA-H199
    Daniela Valencia-Revelo, Esteban Charria-Girón, Katharina Schmidt, Silke Reinecke, Aida M. Vasco-Palacios, Theresia Stradal, Yasmina Marin-Felix, Nelson H. Caicedo-Ortega, Sherif S. Ebada
    BMC Biotechnology.2025;[Epub]     CrossRef
  • Research on the pathogen causing root rot on Phyllanthus emblica from the perspectives of identification, bionomics, fungicide sensitivity assay, and transcriptome analysis under different pH stress
    Yiming Zhang, Minyan Song, Yonghong He, Yehua Si
    Frontiers in Microbiology.2025;[Epub]     CrossRef
  • Epigenetic Regulation of Fungal Secondary Metabolism
    Yufei Zhang, Wenbin Yu, Yi Lu, Yichuan Wu, Zhiwei Ouyang, Yayi Tu, Bin He
    Journal of Fungi.2024; 10(9): 648.     CrossRef
  • Genome and metabolome analysis of Bacillus sp. Hex-HIT36: A newly screened functional microorganism for the degradation of 1-hexadecene in industrial wastewater
    Lei Yang, Chuan Chen, Xijun Xu, Xue-Ting Wang, Defeng Xing, Nanqi Ren, Duu-Jong Lee
    Environmental Research.2024; 260: 119594.     CrossRef
  • Discovery of penicillic acid as a chemical probe against tau aggregation in Alzheimer's disease
    Jennifer Shyong, Jinliang Wang, Quoc-Dung Tran Huynh, Marina Fayzullina, Bo Yuan, Ching-Kuo Lee, Thomas Minehan, Paul M. Seidler, Clay C. C. Wang
    Chemical Science.2024; 15(48): 20467.     CrossRef
  • Transcriptomic Screening of Alternaria oxytropis Isolated from Locoweed Plants for Genes Involved in Mycotoxin Swaisonine Production
    Shuangjie Yuan, Qingmei Zhao, Kun Yu, Ying Gao, Zhengbing Ma, Huanyu Li, Yongtao Yu
    Journal of Fungi.2024; 10(1): 88.     CrossRef
  • Phylogenomics of the psychoactive mushroom genus Psilocybe and evolution of the psilocybin biosynthetic gene cluster
    Alexander J. Bradshaw, Virginia Ramírez-Cruz, Ali R. Awan, Giuliana Furci, Laura Guzmán-Dávalos, Bryn T. M. Dentinger
    Proceedings of the National Academy of Sciences.2024;[Epub]     CrossRef
  • Effects of temperature on the production of ochratoxin A by Aspergillus niger
    Yige Zhang, Zhihui Zhang, Qianru Xu, Yangyong Lv, Shuaibing Zhang, Huanchen Zhai, Yuansen Hu, Shan Wei
    LWT.2024; 191: 115684.     CrossRef
  • Unraveling the Gene Regulatory Networks of the Global Regulators VeA and LaeA in Aspergillus nidulans
    Heungyun Moon, Mi-Kyung Lee, Ilhan Bok, Jin Woo Bok, Nancy P. Keller, Jae-Hyuk Yu, Gustavo H. Goldman
    Microbiology Spectrum.2023;[Epub]     CrossRef
  • Discovery of pyranonaphthoquinones and an eighteen-membered ring macrolide from the rhizospheric soil-derived fungus Phialocephala sp. YUD18001 by OSMAC strategy
    Fei Xie, Yue Sun, Zhi-Feng Zi, Wen-Jing Wang, Dai-Yu Wan, Hao Zhou, Zhong-Tao Ding
    Fitoterapia.2023; 171: 105690.     CrossRef
  • Editorial: Gene regulation of fungal secondary metabolism
    Pinmei Wang, Hee-Soo Park, Wenjie Wang, Wen-Bing Yin
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Construction of RNA silencing system of Penicillium brevicompactum and genetic manipulation of the regulator pbpcz in mycophenolic acid production
    TingTing Hu, Jingjing Wang, Mianhui Chen, Lin Lin, Wei Wei, Dongzhi Wei
    Fungal Genetics and Biology.2023; 169: 103843.     CrossRef
  • Quantitative characterization of filamentous fungal promoters on a single-cell resolution to discover cryptic natural products
    Peng-Lin Wei, Jie Fan, Jingwen Yu, Zihui Ma, Xian Guo, Nancy P. Keller, Erwei Li, Chunbo Lou, Wen-Bing Yin
    Science China Life Sciences.2023; 66(4): 848.     CrossRef
  • Fungal BGCs for Production of Secondary Metabolites: Main Types, Central Roles in Strain Improvement, and Regulation According to the Piano Principle
    Alexander A. Zhgun
    International Journal of Molecular Sciences.2023; 24(13): 11184.     CrossRef
  • Fungal secondary metabolism is governed by an RNA-binding protein CsdA/RsdA complex
    Zili Song, Shuang Zhou, Hongjiao Zhang, Nancy P. Keller, Berl R. Oakley, Xiao Liu, Wen-Bing Yin
    Nature Communications.2023;[Epub]     CrossRef
  • Eco-Friendly Biocontrol Strategies of Alternaria Phytopathogen Fungus: A Focus on Gene-Editing Techniques
    Domingo Cesar Carrascal-Hernández, Edwin Flórez-López, Yeimmy Peralta-Ruiz, Clemencia Chaves-López, Carlos David Grande-Tovar
    Agriculture.2022; 12(10): 1722.     CrossRef
  • Nitrogen source as a modulator of the metabolic activity of Pedobacter lusitanus NL19: a transcriptomic approach
    Covas C., Vaz A., Almeida B., Lourenço J., Figueiredo G., Franco O. L., Mendo S., Caetano T.
    Applied Microbiology and Biotechnology.2022; 106(4): 1583.     CrossRef
  • Antarctic fungi with antibiotic potential isolated from Fort William Point, Antarctica
    Eunice Ordóñez-Enireb, Roberto V. Cucalón, Diana Cárdenas, Nadia Ordóñez, Santiago Coello, Paola Elizalde, Washington B. Cárdenas
    Scientific Reports.2022;[Epub]     CrossRef
  • Whole-Genome Sequence Analysis of an Endophytic Fungus Alternaria sp. SPS-2 and Its Biosynthetic Potential of Bioactive Secondary Metabolites
    Jianyun Tao, Xuelian Bai, Mingyuan Zeng, Mengshi Li, Zhe Hu, Yunfen Hua, Huawei Zhang
    Microorganisms.2022; 10(9): 1789.     CrossRef
  • Transcriptome Analysis Identifies a Gene Cluster for the Biosynthesis of Biruloquinone, a Rare Phenanthraquinone, in a Lichen-Forming Fungus Cladonia macilenta
    Wonyong Kim, Min-Hye Jeong, Sung-Hwan Yun, Jae-Seoun Hur
    Journal of Fungi.2021; 7(5): 398.     CrossRef
  • Fungal Secondary Metabolism
    Javier Avalos, M. Carmen Limón
    Encyclopedia.2021; 2(1): 1.     CrossRef
  • Presence, Mode of Action, and Application of Pathway Specific Transcription Factors in Aspergillus Biosynthetic Gene Clusters
    Wenjie Wang, Yuchao Yu, Nancy P. Keller, Pinmei Wang
    International Journal of Molecular Sciences.2021; 22(16): 8709.     CrossRef
  • Involvement of BbTpc1, an important Zn(II)2Cys6 transcriptional regulator, in chitin biosynthesis, fungal development and virulence of an insect mycopathogen
    Lei Qiu, Jing Zhang, Ji-Zheng Song, Shun-Juan Hu, Tong-Sheng Zhang, Ze Li, Juan-Juan Wang, Wen Cheng
    International Journal of Biological Macromolecules.2021; 166: 1162.     CrossRef
  • Depside and Depsidone Synthesis in Lichenized Fungi Comes into Focus through a Genome-Wide Comparison of the Olivetoric Acid and Physodic Acid Chemotypes of Pseudevernia furfuracea
    Garima Singh, Daniele Armaleo, Francesco Dal Grande, Imke Schmitt
    Biomolecules.2021; 11(10): 1445.     CrossRef
  • Comparative Transcriptome Analysis of Genes Involved in Sesquiterpene Alkaloid Biosynthesis in Trichoderma longibrachiatum MD33 and UN32
    Xu Qian, Hui Jin, Zhuojun Chen, Qingqing Dai, Surendra Sarsaiya, Yitong Qin, Qi Jia, Leilei Jin, Jishuang Chen
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Activation of biosynthetic gene clusters by the global transcriptional regulator TRI6 in Fusarium graminearum
    Kristina Shostak, Christopher Bonner, Amanda Sproule, Indira Thapa, Samuel W. J. Shields, Barbara Blackwell, John Vierula, David Overy, Rajagopal Subramaniam
    Molecular Microbiology.2020; 114(4): 664.     CrossRef
  • Diverse bioactive metabolites from Penicillium sp. MMA derived from the red sea: structure identification and biological activity studies
    Ann G. Boulis, Ahmed A. Hamed, Mohamed E. El-awady, Attia R. Mohamed, Essam M. Eliwa, Mohsen M. S. Asker, Mohamed Shaaban
    Archives of Microbiology.2020; 202(7): 1985.     CrossRef
  • Pullulan biosynthesis in yeast-like fungal cells is regulated by the transcriptional activator Msn2 and cAMP-PKA signaling pathway
    Guang Yang, Guang-Lei Liu, Shu-Jun Wang, Zhen-Ming Chi, Zhe Chi
    International Journal of Biological Macromolecules.2020; 157: 591.     CrossRef
  • Chemical repertoire and biosynthetic machinery of the Aspergillus flavus secondary metabolome: A review
    Valdet Uka, Jeffrey W. Cary, Matthew D. Lebar, Olivier Puel, Sarah De Saeger, José Diana Di Mavungu
    Comprehensive Reviews in Food Science and Food Safety.2020; 19(6): 2797.     CrossRef
  • Secondary Metabolites of the Rice Blast Fungus Pyricularia oryzae: Biosynthesis and Biological Function
    Takayuki Motoyama
    International Journal of Molecular Sciences.2020; 21(22): 8698.     CrossRef
  • Fungal evolution: cellular, genomic and metabolic complexity
    Miguel A. Naranjo‐Ortiz, Toni Gabaldón
    Biological Reviews.2020; 95(5): 1198.     CrossRef
  • Regulation of Secondary Metabolism in the Penicillium Genus
    Christelle El Hajj Assaf, Chrystian Zetina-Serrano, Nadia Tahtah, André El Khoury, Ali Atoui, Isabelle P. Oswald, Olivier Puel, Sophie Lorber
    International Journal of Molecular Sciences.2020; 21(24): 9462.     CrossRef
  • Metabolomics Reveals the Response of the Phenylpropanoid Biosynthesis Pathway to Starvation Treatment in the Grape Endophyte Alternaria sp. MG1
    Yao Lu, Jinxin Che, Xiaoguang Xu, Bing Pang, Xixi Zhao, Yanlin Liu, Junling Shi
    Journal of Agricultural and Food Chemistry.2020; 68(4): 1126.     CrossRef
  • An overview on the biosynthesis and metabolic regulation of monacolin K/lovastatin
    Yaru Zhang, Zhiting Chen, Qinyou Wen, Zixiao Xiong, Xiaohua Cao, Zhenghuai Zheng, Yangxin Zhang, Zhiwei Huang
    Food & Function.2020; 11(7): 5738.     CrossRef
  • Strategies for Discovering New Antibiotics from Bacteria in the Post-Genomic Era
    Jia-Wei Zhu, Si-Jia Zhang, Wen-Guang Wang, Hui Jiang
    Current Microbiology.2020; 77(11): 3213.     CrossRef
  • Functional characterization of the sterigmatocystin secondary metabolite gene cluster in the filamentous fungus Podospora anserina: involvement in oxidative stress response, sexual development, pigmentation and interspecific competitions
    Ling Shen, François‐Hugues Porée, Thomas Gaslonde, Hervé Lalucque, Florence Chapeland‐Leclerc, Gwenaël Ruprich‐Robert
    Environmental Microbiology.2019; 21(8): 3011.     CrossRef
  • Functional characterization of host toxic EcdB transcription factor protein of echinocandin B biosynthetic gene cluster
    Arvind Kumar, Vinay Kumar, Antresh Kumar
    Biotechnology and Applied Biochemistry.2019; 66(4): 626.     CrossRef
  • Sterol inhibitor “Fluconazole” enhance the Taxol yield and molecular expression of its encoding genes cluster from Aspergillus flavipes
    Ashraf S.A. El-Sayed, Dalia M.I. Ali, Marwa A. Yassin, Rawia A. Zayed, Gul Shad Ali
    Process Biochemistry.2019; 76: 55.     CrossRef
  • Progress and Challenges: Development and Implementation of CRISPR/Cas9 Technology in Filamentous Fungi
    Qiang Wang, Jeffrey J. Coleman
    Computational and Structural Biotechnology Journal.2019; 17: 761.     CrossRef
  • Aspergillus flavus NRRL 3251 Growth, Oxidative Status, and Aflatoxins Production Ability In Vitro under Different Illumination Regimes
    Tihomir Kovač, Bojan Šarkanj, Biljana Crevar, Marija Kovač, Ante Lončarić, Ivica Strelec, Chibundu N. Ezekiel, Michael Sulyok, Rudolf Krska
    Toxins.2018; 10(12): 528.     CrossRef
  • Genomic diversity in ochratoxigenic and non ochratoxigenic strains of Aspergillus carbonarius
    Gemma Castellá, M. Rosa Bragulat, Laura Puig, Walter Sanseverino, F. Javier Cabañes
    Scientific Reports.2018;[Epub]     CrossRef
  • From genomics to metabolomics, moving toward an integrated strategy for the discovery of fungal secondary metabolites
    T. Hautbergue, E. L. Jamin, L. Debrauwer, O. Puel, I. P. Oswald
    Natural Product Reports.2018; 35(2): 147.     CrossRef
  • Chromatin‐level regulation of the fragmented dothistromin gene cluster in the forest pathogen Dothistroma septosporum
    Pranav Chettri, Pierre‐Yves Dupont, Rosie E. Bradshaw
    Molecular Microbiology.2018; 107(4): 508.     CrossRef
  • Cys 2 His 2 Zinc Finger Transcription Factor BcabaR1 Positively Regulates Abscisic Acid Production in Botrytis cinerea
    Yingming Wang, Jinyan Zhou, Juan Zhong, Di Luo, Zhemin Li, Jie Yang, Dan Shu, Hong Tan, Harold L. Drake
    Applied and Environmental Microbiology.2018;[Epub]     CrossRef
  • Identification of the decumbenone biosynthetic gene cluster in Penicillium decumbens and the importance for production of calbistrin
    Sietske Grijseels, Carsten Pohl, Jens Christian Nielsen, Zahida Wasil, Yvonne Nygård, Jens Nielsen, Jens C. Frisvad, Kristian Fog Nielsen, Mhairi Workman, Thomas Ostenfeld Larsen, Arnold J. M. Driessen, Rasmus John Normand Frandsen
    Fungal Biology and Biotechnology.2018;[Epub]     CrossRef
  • Dissimilar pigment regulation in Serpula lacrymans and Paxillus involutus during inter-kingdom interactions
    James P. Tauber, Ramses Gallegos-Monterrosa, Ákos T. Kovács, Ekaterina Shelest, Dirk Hoffmeister
    Microbiology.2018; 164(1): 65.     CrossRef
  • Enhanced hypocrellin production via coexpression of alpha-amylase and hemoglobin genes in Shiraia bambusicola
    Ruijie Gao, Huaxiang Deng, Zhengbing Guan, Xiangru Liao, Yujie Cai
    AMB Express.2018;[Epub]     CrossRef
  • Engineering of the Filamentous Fungus Penicillium chrysogenum as Cell Factory for Natural Products
    Fernando Guzmán-Chávez, Reto D. Zwahlen, Roel A. L. Bovenberg, Arnold J. M. Driessen
    Frontiers in Microbiology.2018;[Epub]     CrossRef
  • Condition‐dependent co‐regulation of genomic clusters of virulence factors in the grapevine trunk pathogen Neofusicoccum parvum
    Mélanie Massonnet, Abraham Morales‐Cruz, Rosa Figueroa‐Balderas, Daniel P. Lawrence, Kendra Baumgartner, Dario Cantu
    Molecular Plant Pathology.2018; 19(1): 21.     CrossRef
  • Enhanced hypocrellin production of Shiraia sp. SUPER-H168 by overexpression of alpha-amylase gene
    Ruijie Gao, Zhecun Xu, Huaxiang Deng, Zhengbing Guan, Xiangru Liao, Ye Zhao, Xiaohui Zheng, Yujie Cai, Marie-Joelle Virolle
    PLOS ONE.2018; 13(5): e0196519.     CrossRef
  • Activation of Aflatoxin Biosynthesis Alleviates Total ROS in Aspergillus parasiticus
    Gabriel Kenne, Phani Gummadidala, Mayomi Omebeyinje, Ananda Mondal, Dominic Bett, Sandra McFadden, Sydney Bromfield, Nora Banaszek, Michelle Velez-Martinez, Chandrani Mitra, Isabelle Mikell, Saurabh Chatterjee, Josephine Wee, Anindya Chanda
    Toxins.2018; 10(2): 57.     CrossRef
  • Strategies to diversify natural products for drug discovery
    Gang Li, Hong‐Xiang Lou
    Medicinal Research Reviews.2018; 38(4): 1255.     CrossRef
  • Regulatory cascade and biological activity of Beauveria bassiana oosporein that limits bacterial growth after host death
    Yanhua Fan, Xi Liu, Nemat O. Keyhani, Guirong Tang, Yan Pei, Wenwen Zhang, Sheng Tong
    Proceedings of the National Academy of Sciences.2017;[Epub]     CrossRef
  • The GATA-Type Transcription Factor Csm1 Regulates Conidiation and Secondary Metabolism in Fusarium fujikuroi
    Eva-Maria Niehaus, Julia Schumacher, Immo Burkhardt, Patrick Rabe, Martin Münsterkötter, Ulrich Güldener, Christian M. K. Sieber, Jeroen S. Dickschat, Bettina Tudzynski
    Frontiers in Microbiology.2017;[Epub]     CrossRef
  • A GATA-type transcription factor AcAREB for nitrogen metabolism is involved in regulation of cephalosporin biosynthesis in Acremonium chrysogenum
    Feifei Guan, Yuanyuan Pan, Jinyang Li, Gang Liu
    Science China Life Sciences.2017; 60(9): 958.     CrossRef
  • Discovery of McrA, a master regulator of Aspergillus secondary metabolism
    C. Elizabeth Oakley, Manmeet Ahuja, Wei‐Wen Sun, Ruth Entwistle, Tomohiro Akashi, Junko Yaegashi, Chun‐Jun Guo, Gustavo C. Cerqueira, Jennifer Russo Wortman, Clay C. C. Wang, Yi‐Ming Chiang, Berl R. Oakley
    Molecular Microbiology.2017; 103(2): 347.     CrossRef
  • Tpc1 is an important Zn(II)2Cys6 transcriptional regulator required for polarized growth and virulence in the rice blast fungus
    Rita Galhano, Adriana Illana, Lauren S. Ryder, Julio Rodríguez-Romero, Marie Demuez, Muhammad Badaruddin, Ana Lilia Martinez-Rocha, Darren M. Soanes, David J. Studholme, Nicholas J. Talbot, Ane Sesma, Paul Birch
    PLOS Pathogens.2017; 13(7): e1006516.     CrossRef
  • Mechanism and regulation of sorbicillin biosynthesis by Penicillium chrysogenum
    Fernando Guzmán‐Chávez, Oleksandr Salo, Yvonne Nygård, Peter P. Lankhorst, Roel A. L. Bovenberg, Arnold J. M. Driessen
    Microbial Biotechnology.2017; 10(4): 958.     CrossRef
  • Regulatory Mechanism of Mycotoxin Tenuazonic Acid Production in Pyricularia oryzae
    Choong-Soo Yun, Takayuki Motoyama, Hiroyuki Osada
    ACS Chemical Biology.2017; 12(9): 2270.     CrossRef
  • Transcriptomic and metabolomic profiling of ionic liquid stimuli unveils enhanced secondary metabolism in Aspergillus nidulans
    Paula C. Alves, Diego O. Hartmann, Oscar Núñez, Isabel Martins, Teresa L. Gomes, Helga Garcia, Maria Teresa Galceran, Richard Hampson, Jörg D. Becker, Cristina Silva Pereira
    BMC Genomics.2016;[Epub]     CrossRef
  • The Genomes of Three Uneven Siblings: Footprints of the Lifestyles of Three Trichoderma Species
    Monika Schmoll, Christoph Dattenböck, Nohemí Carreras-Villaseñor, Artemio Mendoza-Mendoza, Doris Tisch, Mario Ivan Alemán, Scott E. Baker, Christopher Brown, Mayte Guadalupe Cervantes-Badillo, José Cetz-Chel, Gema Rosa Cristobal-Mondragon, Luis Delaye, Ed
    Microbiology and Molecular Biology Reviews.2016; 80(1): 205.     CrossRef
  • Microbial interactions: ecology in a molecular perspective
    Raíssa Mesquita Braga, Manuella Nóbrega Dourado, Welington Luiz Araújo
    Brazilian Journal of Microbiology.2016; 47: 86.     CrossRef
  • Development of Genetic Dereplication Strains in Aspergillus nidulans Results in the Discovery of Aspercryptin
    Yi‐Ming Chiang, Manmeet Ahuja, C. Elizabeth Oakley, Ruth Entwistle, Anabanadam Asokan, Christoph Zutz, Clay C. C. Wang, Berl R. Oakley
    Angewandte Chemie.2016; 128(5): 1694.     CrossRef
  • The botrydial biosynthetic gene cluster of Botrytis cinerea displays a bipartite genomic structure and is positively regulated by the putative Zn(II)2Cys6 transcription factor BcBot6
    Antoine Porquier, Guillaume Morgant, Javier Moraga, Bérengère Dalmais, Isabelle Luyten, Adeline Simon, Jean-Marc Pradier, Joëlle Amselem, Isidro González Collado, Muriel Viaud
    Fungal Genetics and Biology.2016; 96: 33.     CrossRef
  • Secondary metabolite gene clusters in the entomopathogen fungus Metarhizium anisopliae: genome identification and patterns of expression in a cuticle infection model
    Nicolau Sbaraini, Rafael Lucas Muniz Guedes, Fábio Carrer Andreis, Ângela Junges, Guilherme Loss de Morais, Marilene Henning Vainstein, Ana Tereza Ribeiro de Vasconcelos, Augusto Schrank
    BMC Genomics.2016;[Epub]     CrossRef
  • Identification of a Halogenase Involved in the Biosynthesis of Ochratoxin A in Aspergillus carbonarius
    Massimo Ferrara, Giancarlo Perrone, Lucia Gambacorta, Filomena Epifani, Michele Solfrizzo, Antonia Gallo, A. A. Brakhage
    Applied and Environmental Microbiology.2016; 82(18): 5631.     CrossRef
  • Deciphering the Anti-Aflatoxinogenic Properties of Eugenol Using a Large-Scale q-PCR Approach
    Isaura Caceres, Rhoda El Khoury, Ángel Medina, Yannick Lippi, Claire Naylies, Ali Atoui, André El Khoury, Isabelle Oswald, Jean-Denis Bailly, Olivier Puel
    Toxins.2016; 8(5): 123.     CrossRef
  • Modulation of genetic clusters for synthesis of bioactive molecules in fungal endophytes: A review
    V.B. Deepika, T.S. Murali, K. Satyamoorthy
    Microbiological Research.2016; 182: 125.     CrossRef
  • The global regulator LaeA controls biosynthesis of host-specific toxins, pathogenicity and development of Alternaria alternata pathotypes
    Kazumi Takao, Yasunori Akagi, Takashi Tsuge, Yoshiaki Harimoto, Mikihiro Yamamoto, Motoichiro Kodama
    Journal of General Plant Pathology.2016; 82(3): 121.     CrossRef
  • Development of Genetic Dereplication Strains in Aspergillus nidulans Results in the Discovery of Aspercryptin
    Yi‐Ming Chiang, Manmeet Ahuja, C. Elizabeth Oakley, Ruth Entwistle, Anabanadam Asokan, Christoph Zutz, Clay C. C. Wang, Berl R. Oakley
    Angewandte Chemie International Edition.2016; 55(5): 1662.     CrossRef
  • Regulation and Role of Fungal Secondary Metabolites
    Juliane Macheleidt, Derek J. Mattern, Juliane Fischer, Tina Netzker, Jakob Weber, Volker Schroeckh, Vito Valiante, Axel A. Brakhage
    Annual Review of Genetics.2016; 50(1): 371.     CrossRef
  • Microbial metabolomics in open microscale platforms
    Layla J. Barkal, Ashleigh B. Theberge, Chun-Jun Guo, Joe Spraker, Lucas Rappert, Jean Berthier, Kenneth A. Brakke, Clay C. C. Wang, David J. Beebe, Nancy P. Keller, Erwin Berthier
    Nature Communications.2016;[Epub]     CrossRef
  • The Fdb3 transcription factor of the Fusarium Detoxification of Benzoxazolinone gene cluster is required for MBOA but not BOA degradation in Fusarium pseudograminearum
    Andrew J. Kettle, Jason Carere, Jacqueline Batley, John M. Manners, Kemal Kazan, Donald M. Gardiner
    Fungal Genetics and Biology.2016; 88: 44.     CrossRef
  • Phytotoxin production in Aspergillus terreus is regulated by independent environmental signals
    Markus Gressler, Florian Meyer, Daniel Heine, Peter Hortschansky, Christian Hertweck, Matthias Brock
    eLife.2015;[Epub]     CrossRef
  • Chromosome-level genome map provides insights into diverse defense mechanisms in the medicinal fungus Ganoderma sinense
    Yingjie Zhu, Jiang Xu, Chao Sun, Shiguo Zhou, Haibin Xu, David R. Nelson, Jun Qian, Jingyuan Song, Hongmei Luo, Li Xiang, Ying Li, Zhichao Xu, Aijia Ji, Lizhi Wang, Shanfa Lu, Alice Hayward, Wei Sun, Xiwen Li, David C. Schwartz, Yitao Wang, Shilin Chen
    Scientific Reports.2015;[Epub]     CrossRef
  • The global regulator FfSge1 is required for expression of secondary metabolite gene clusters but not for pathogenicity in Fusarium fujikuroi
    Caroline B. Michielse, Lena Studt, Slavica Janevska, Christian M. K. Sieber, Birgit Arndt, Jose Juan Espino, Hans‐Ulrich Humpf, Ulrich Güldener, Bettina Tudzynski
    Environmental Microbiology.2015; 17(8): 2690.     CrossRef
  • Discovery of microbial natural products by activation of silent biosynthetic gene clusters
    Peter J. Rutledge, Gregory L. Challis
    Nature Reviews Microbiology.2015; 13(8): 509.     CrossRef
  • Penicyclones A–E, Antibacterial Polyketides from the Deep-Sea-Derived Fungus Penicillium sp. F23-2
    Wenqiang Guo, Zhenzhen Zhang, Tianjiao Zhu, Qianqun Gu, Dehai Li
    Journal of Natural Products.2015; 78(11): 2699.     CrossRef
  • Synthetic biology of fungal natural products
    Derek J. Mattern, Vito Valiante, Shiela E. Unkles, Axel A. Brakhage
    Frontiers in Microbiology.2015;[Epub]     CrossRef
  • The bZIP transcription factor PfZipA regulates secondary metabolism and oxidative stress response in the plant endophytic fungus Pestalotiopsis fici
    Xiuna Wang, Fan Wu, Ling Liu, Xingzhong Liu, Yongsheng Che, Nancy P. Keller, Liyun Guo, Wen-Bing Yin
    Fungal Genetics and Biology.2015; 81: 221.     CrossRef
  • Leucine metabolism regulates TRI6 expression and affects deoxynivalenol production and virulence in Fusarium graminearum
    Rajagopal Subramaniam, Swara Narayanan, Sean Walkowiak, Li Wang, Manisha Joshi, Hélène Rocheleau, Thérèse Ouellet, Linda J. Harris
    Molecular Microbiology.2015; 98(4): 760.     CrossRef
  • Genetic and metabolic engineering of microorganisms for the development of new flavor compounds from terpenic substrates
    Murillo L. Bution, Gustavo Molina, Meissa R.E. Abrahão, Gláucia M. Pastore
    Critical Reviews in Biotechnology.2015; 35(3): 313.     CrossRef
  • Recent advances in genome mining of secondary metabolite biosynthetic gene clusters and the development of heterologous expression systems in Aspergillus nidulans
    Junko Yaegashi, Berl R Oakley, Clay C C Wang
    Journal of Industrial Microbiology and Biotechnology.2014; 41(2): 433.     CrossRef
  • Fungal extrolites as a new source for therapeutic compounds and as building blocks for applications in synthetic biology
    Ana Lúcia Leitão, Francisco J. Enguita
    Microbiological Research.2014; 169(9-10): 652.     CrossRef
  • Spatial and temporal control of fungal natural product synthesis
    Fang Yun Lim, Nancy P. Keller
    Nat. Prod. Rep..2014; 31(10): 1277.     CrossRef
  • Strategies for mining fungal natural products
    Philipp Wiemann, Nancy P Keller
    Journal of Industrial Microbiology and Biotechnology.2014; 41(2): 301.     CrossRef
  • Epigenetic Control of Effector Gene Expression in the Plant Pathogenic Fungus Leptosphaeria maculans
    Jessica L. Soyer, Mennat El Ghalid, Nicolas Glaser, Bénédicte Ollivier, Juliette Linglin, Jonathan Grandaubert, Marie-Hélène Balesdent, Lanelle R. Connolly, Michael Freitag, Thierry Rouxel, Isabelle Fudal, Nicholas J. Talbot
    PLoS Genetics.2014; 10(3): e1004227.     CrossRef
  • A fungal prenyltransferase catalyzes the regular di-prenylation at positions 20 and 21 of paxilline
    Chengwei Liu, Motoyoshi Noike, Atsushi Minami, Hideaki Oikawa, Tohru Dairi
    Bioscience, Biotechnology, and Biochemistry.2014; 78(3): 448.     CrossRef
  • Screening of a Botrytis cinerea one-hybrid library reveals a Cys2His2 transcription factor involved in the regulation of secondary metabolism gene clusters
    Adeline Simon, Bérengère Dalmais, Guillaume Morgant, Muriel Viaud
    Fungal Genetics and Biology.2013; 52: 9.     CrossRef
  • Impact of alg3 gene deletion on growth, development, pigment production, protein secretion, and functions of recombinant Trichoderma reesei cellobiohydrolases in Aspergillus niger
    Ziyu Dai, Uma K. Aryal, Anil Shukla, Wei-Jun Qian, Richard D. Smith, Jon K. Magnuson, William S. Adney, Gregg T. Beckham, Roman Brunecky, Michael E. Himmel, Stephen R. Decker, Xiaohui Ju, Xiao Zhang, Scott E. Baker
    Fungal Genetics and Biology.2013; 61: 120.     CrossRef
  • Aflatoxins, fumonisins, and trichothecenes: a convergence of knowledge
    Charles P. Woloshuk, Won-Bo Shim
    FEMS Microbiology Reviews.2013; 37(1): 94.     CrossRef
  • Fine De Novo Sequencing of a Fungal Genome Using only SOLiD Short Read Data: Verification on Aspergillus oryzae RIB40
    Myco Umemura, Yoshinori Koyama, Itaru Takeda, Hiroko Hagiwara, Tsutomu Ikegami, Hideaki Koike, Masayuki Machida, Mikael Rørdam Andersen
    PLoS ONE.2013; 8(5): e63673.     CrossRef
  • Engineering fungal secondary metabolism: A roadmap to novel compounds
    Daniel H. Scharf, Axel A. Brakhage
    Journal of Biotechnology.2013; 163(2): 179.     CrossRef
  • Disruption of the nitrogen regulatory gene AcareA in Acremonium chrysogenum leads to reduction of cephalosporin production and repression of nitrogen metabolism
    Jinyang Li, Yuanyuan Pan, Gang Liu
    Fungal Genetics and Biology.2013; 61: 69.     CrossRef
  • The transport of phenylacetic acid across the peroxisomal membrane is mediated by the PaaT protein in Penicillium chrysogenum
    Marta Fernández-Aguado, Ricardo V. Ullán, Fernando Teijeira, Raquel Rodríguez-Castro, Juan F. Martín
    Applied Microbiology and Biotechnology.2013; 97(7): 3073.     CrossRef
  • Isolation and Characterization of Double Deletion Mutants of nsdD and veA or nsdC, the Genes Positive Regulating Sexual Development of Aspergillus nidulans
    Lee-Han Kim, Ha-Eun Kim, Dong-Min Han
    The Korean Journal of Microbiology.2013; 49(4): 419.     CrossRef
  • Regulation of fungal secondary metabolism
    Axel A. Brakhage
    Nature Reviews Microbiology.2013; 11(1): 21.     CrossRef
  • VeA and MvlA repression of the cryptic orsellinic acid gene cluster in Aspergillus nidulans involves histone 3 acetylation
    Jin Woo Bok, Alexandra A. Soukup, Elizabeth Chadwick, Yi‐Ming Chiang, Clay C. C. Wang, Nancy P. Keller
    Molecular Microbiology.2013; 89(5): 963.     CrossRef
  • Distinct Amino Acids of Histone H3 Control Secondary Metabolism in Aspergillus nidulans
    Hans-Wilhelm Nützmann, Juliane Fischer, Kirstin Scherlach, Christian Hertweck, Axel A. Brakhage
    Applied and Environmental Microbiology.2013; 79(19): 6102.     CrossRef
  • Strategies for strain improvement in Fusarium fujikuroi: overexpression and localization of key enzymes of the isoprenoid pathway and their impact on gibberellin biosynthesis
    Sabine Albermann, Pia Linnemannstöns, Bettina Tudzynski
    Applied Microbiology and Biotechnology.2013; 97(7): 2979.     CrossRef
  • MIDDAS-M: Motif-Independent De Novo Detection of Secondary Metabolite Gene Clusters through the Integration of Genome Sequencing and Transcriptome Data
    Myco Umemura, Hideaki Koike, Nozomi Nagano, Tomoko Ishii, Jin Kawano, Noriko Yamane, Ikuko Kozone, Katsuhisa Horimoto, Kazuo Shin-ya, Kiyoshi Asai, Jiujiang Yu, Joan W. Bennett, Masayuki Machida, Kap-Hoon Han
    PLoS ONE.2013; 8(12): e84028.     CrossRef
  • FcStuA from Fusarium culmorum Controls Wheat Foot and Root Rot in a Toxin Dispensable Manner
    Matias Pasquali, Francesca Spanu, Barbara Scherm, Virgilio Balmas, Lucien Hoffmann, Kim E. Hammond-Kosack, Marco Beyer, Quirico Migheli, Yin-Won Lee
    PLoS ONE.2013; 8(2): e57429.     CrossRef
  • The AreA transcription factor in Fusarium graminearum regulates the use of some nonpreferred nitrogen sources and secondary metabolite production
    Henriette Giese, Teis Esben Sondergaard, Jens Laurids Sørensen
    Fungal Biology.2013; 117(11-12): 814.     CrossRef
  • Recent advances in the biosynthesis of penicillins, cephalosporins and clavams and its regulation
    Gulay Ozcengiz, Arnold L. Demain
    Biotechnology Advances.2013; 31(2): 287.     CrossRef
  • Segregation of secondary metabolite biosynthesis in hybrids of Fusarium fujikuroi and Fusarium proliferatum
    L. Studt, C. Troncoso, F. Gong, P. Hedden, C. Toomajian, J.F. Leslie, H.-U. Humpf, M.C. Rojas, B. Tudzynski
    Fungal Genetics and Biology.2012; 49(7): 567.     CrossRef
  • Order in the playground
    Ben Field, Anne Osbourn
    Mobile Genetic Elements.2012; 2(1): 46.     CrossRef
  • Overexpression of the Aspergillus nidulans histone 4 acetyltransferase EsaA increases activation of secondary metabolite production
    Alexandra A. Soukup, Yi‐Ming Chiang, Jin Woo Bok, Yazmid Reyes‐Dominguez, Berl R. Oakley, Clay C. C. Wang, Joseph Strauss, Nancy P. Keller
    Molecular Microbiology.2012; 86(2): 314.     CrossRef
  • Advances in Aspergillus secondary metabolite research in the post-genomic era
    James F. Sanchez, Amber D. Somoza, Nancy P. Keller, Clay C. C. Wang
    Natural Product Reports.2012; 29(3): 351.     CrossRef
  • Identification and Characterization of a Novel Diterpene Gene Cluster in Aspergillus nidulans
    Kirsi Bromann, Mervi Toivari, Kaarina Viljanen, Anu Vuoristo, Laura Ruohonen, Tiina Nakari-Setälä, Gustavo Henrique Goldman
    PLoS ONE.2012; 7(4): e35450.     CrossRef
  • Fungal endophytes of grasses
    Aiko Tanaka, Daigo Takemoto, Tetsuya Chujo, Barry Scott
    Current Opinion in Plant Biology.2012; 15(4): 462.     CrossRef
  • NosA, a transcription factor important in Aspergillus fumigatus stress and developmental response, rescues the germination defect of a laeA deletion
    Alexandra A. Soukup, Mitra Farnoodian, Erwin Berthier, Nancy P. Keller
    Fungal Genetics and Biology.2012; 49(11): 857.     CrossRef
  • An Aspergillus nidulans bZIP response pathway hardwired for defensive secondary metabolism operates through aflR
    Wen‐Bing Yin, Saori Amaike, Dana J. Wohlbach, Audrey P. Gasch, Yi‐Ming Chiang, Clay C. C. Wang, Jin Woo Bok, Marko Rohlfs, Nancy P. Keller
    Molecular Microbiology.2012; 83(5): 1024.     CrossRef
[MINIREVIEW] New perspectives of Lactobacillus plantarum as a probiotic: The gut-heart-brain axis
Yen-Wenn Liu , Min-Tze Liong , Ying-Chieh Tsai
J. Microbiol. 2018;56(9):601-613.   Published online August 23, 2018
DOI: https://doi.org/10.1007/s12275-018-8079-2
  • 663 View
  • 0 Download
  • 112 Crossref
AbstractAbstract PDF
Lactobacillus plantarum is a non-gas-producing lactic acid bacterium that is generally regarded as safe (GRAS) with Qualified Presumption of Safety (QPS) status. Although traditionally used for dairy, meat and vegetable fermentation, L. plantarum is gaining increasing significance as a probiotic. With the newly acclaimed gut-heart-brain axis, strains of L. plantarum have proven to be a valuable species for the development of probiotics, with various beneficial effects on gut health, metabolic disorders and brain health. In this review, the classification and taxonomy, and the relation of these with safety aspects are introduced. Characteristics of L. plantarum to fulfill the criteria as a probiotic are discussed. Emphasis are also given to the beneficial functions of L. plantarum in gut disorders such as inflammatory bowel diseases, metabolic syndromes, dyslipidemia, hypercholesteromia, obesity, and diabetes, and brain health aspects involving psychological disorders.

Citations

Citations to this article as recorded by  
  • Lactiplantibacillus plantarum as a promising adjuvant for neurological disorders therapy through the brain-gut axis and related action pathways
    Josilaene Duarte Luiz, Cynthia Manassi, Marciane Magnani, Adriano Gomes da Cruz, Tatiana Colombo Pimentel, Silvani Verruck
    Critical Reviews in Food Science and Nutrition.2025; 65(4): 715.     CrossRef
  • Single and repeated-dose toxicity studies by intravaginal administration of Lactobacillus plantarum ATG-K2 powder in female rats
    Jae-Hyun Kang, Min-Soo Kang, Sun-Don Kim, Hyun-Kul Lee, Si-Whan Song, Chun-Ja Nam, Kwang-Il Park
    Toxicological Research.2025; 41(1): 27.     CrossRef
  • Metal ion-induced multi-layer coatings improves gastrointestinal resistance of Lactiplantibacillus plantarum and biosafety evaluation
    Yanming Ren, Shuifang Mao, Pin Chen, Xingqian Ye, Jinhu Tian
    Food Hydrocolloids.2025; 162: 110928.     CrossRef
  • Lactobacillus plantarum liver abscess following ERCP: a case report and review
    Wenjing Ren, Yuran Wei, Guanping Lian, Chuwei Yang, Yufei Liu
    BMC Infectious Diseases.2025;[Epub]     CrossRef
  • The effects of Astragalus, Epimedium, and Fructus Ligustri Lucidi extract on the antioxidant capacity, and immune status of goslings under stress conditions
    Qing Qu, Yihong Sun, Yayan Liang, Yongsheng Nie, Ming Gao, Yaohui Yuan, Wei Wang, Shuo Zhou
    Frontiers in Veterinary Science.2025;[Epub]     CrossRef
  • Assessment of the Microbial Profile of Selected Commercially Prepared Food Spices in Nigeria
    Akinsiku, E. T., Adebolu, T. T., Ajayi, B., Akinsade, A. S.
    African Journal of Biology and Medical Research.2025; 8(1): 36.     CrossRef
  • Uso de ativos naturais em mulheres no período pós-menopausa para o controle de dislipidemias: um estudo de caso
    Julia Portela Lorencet, Luana L Lacerda Laskos, Juliane Nadal Dias Swiech
    Revista Sociedade Científica.2025; 8(1): 308.     CrossRef
  • Gut health improvement by locally isolated probiotics and histomorphometric analysis in Wistar rats
    Zuhra Bibi, Dilara Abbas Bukhari, Muhammad Qadeer Sarwar, Arifullah, Samina Younas, Tayyab Manzoor, Abdul Rehman
    Current Research in Biotechnology.2025; 9: 100271.     CrossRef
  • Isolation, Characterization and Probiotic Properties of Levilactobacillus brevis FS1 from Fermented Food and Its Impact on Differentiation and Fat Deposition
    Mansour K. Gatasheh
    Indian Journal of Microbiology.2025; 65(2): 1079.     CrossRef
  • Antimicrobial activity and mechanism of novel postbiotics against foodborne pathogens
    Yucui Tong, Zaheer Abbas, Jing Zhang, Junyong Wang, Yichen Zhou, Dayong Si, Xubiao Wei, Rijun Zhang
    LWT.2025; 217: 117464.     CrossRef
  • Probiotic Characterization of Lactiplantibacillus paraplantarum SDN1.2 and Its Anti-Inflammatory Effect on Klebsiella pneumoniae-Infected Mammary Glands
    Jia Cheng, Jingdi Tong, Can Li, Ziyan Wang, Hao Li, Meiyi Ren, Jinshang Song, Deyuan Song, Qinna Xie, Mingchao Liu
    Veterinary Sciences.2025; 12(4): 323.     CrossRef
  • Betaine alleviates obesity-related metabolic disorders in rats: insights from microbiomes, lipidomics, and transcriptomics
    Xian Wang, Xin Shang, Yan Pan, Yu Fu, Huilian Zhu, Shuxun Yan
    Frontiers in Nutrition.2025;[Epub]     CrossRef
  • Antimicrobial Effect of Lactobacillus Supernatant on Polyresistant Bacteria of the ESKAPE Group
    T. A. Danilova, A. A. Adzhieva, G. A. Danilina, A. G. Minko, O. A. Dmitrenko, V. G. Zhukhovitsky
    Bulletin of Experimental Biology and Medicine.2025; 178(5): 615.     CrossRef
  • Comparative genomics and metabolite analysis of Lactiplantibacillus plantarum strains in dairy and vegetable fermentation environments
    Qinggele Borjihan, Zhan Yang, Kailonng Liu, Chengcong Yang, Xiaoyuan Zhang, Guoqiang Yao
    Food Bioscience.2025; 65: 106058.     CrossRef
  • Oral delivery of probiotic combined natural phenolic-metal framework with microencapsulation for prolonged intestinal retention and alleviation of inflammatory bowel disease
    Mengna Zhao, Longkai Mu, Fangqin Xiang, Wenqing Lv, Haixin Jiang, Guanyu Tao, Bailiang Li
    Chemical Engineering Journal.2025; 512: 162763.     CrossRef
  • Unveiling the metabolic transformation of Astragalus membranaceus through probiotic fermentation and its impact on growth and gut health in common carp (Cyprinus carpio)
    Hongtao Shi, Mengfei Ma, Baocai Ma, Xiufen Wang, Jianxun Guo, Xianqian Jiao, Yueying Wang, Heping Li, Kai Zhong, Guoyu Yang, Huanling Wang, Yingqian Han
    Aquaculture Reports.2025; 42: 102854.     CrossRef
  • Preclinical Safety Assessment of the Oral Administration of Lactobacillus plantarum GUANKE in Animal Models
    Yuewen Yang, Yanlin Zhang, Ruixiang Sun, Wenjuan Du, Yangyang Liu, Lijun Zheng, Zhihong Ren, Ming ding Li, Jianguo Xu
    Probiotics and Antimicrobial Proteins.2025;[Epub]     CrossRef
  • Lactobacillus plantarum 24-7 improves postoperative bloating and hard stools by modulating intestinal microbiota in patients with congenital heart disease: a randomized controlled trial
    Heng Yang, Wanqi Lan, Chao Luo, Qin Huang, Zhiwang Zhong, Juesheng Yang, Haiyan Xiang, Tingtao Chen, Yanhua Tang
    Food & Function.2024; 15(4): 2090.     CrossRef
  • Applications of Strain‐Specific Probiotics in the Management of Cardiovascular Diseases: A Systemic Review
    Saleha Khan, Firdos Ahmad, Nauman Khalid
    Molecular Nutrition & Food Research.2024;[Epub]     CrossRef
  • A Response Surface Methodological Approach for Large-Scale Production of Antibacterials from Lactiplantibacillus plantarum with Potential Utility against Foodborne and Orthopedic Infections
    Paulpandian Prema, Daoud Ali, Van-Huy Nguyen, Bhathini Vaikuntavasan Pradeep, Veeramani Veeramanikandan, Maria Daglia, Carla Renata Arciola, Paulraj Balaji
    Antibiotics.2024; 13(5): 437.     CrossRef
  • Oral Administration of Lactiplantibacillus plantarum CCFM8661 Alleviates Dichlorvos-Induced Toxicity in Mice
    Weiwei Ma, Yiyang Zhao, Hang Sun, Ziwei Zhang, Lili Huang
    Foods.2024; 13(19): 3211.     CrossRef
  • Biological Activity of Lactic Acid Bacteria Exopolysaccharides and Their Applications in the Food and Pharmaceutical Industries
    Shengnan Liang, Xinyu Wang, Chun Li, Libo Liu
    Foods.2024; 13(11): 1621.     CrossRef
  • Progress on the mechanisms of Lactobacillus plantarum to improve intestinal barrier function in ulcerative colitis
    Yihui Liu, Gang Liu, Jun Fang
    The Journal of Nutritional Biochemistry.2024; 124: 109505.     CrossRef
  • Investigating next-generation edible packaging: Protein-based films and coatings for delivering active compounds
    Myat Noe Khin, Shabbir Ahammed, Md. Murtuza Kamal, Md Nazmus Saqib, Fei Liu, Fang Zhong
    Food Hydrocolloids for Health.2024; 6: 100182.     CrossRef
  • Lactobacillus Persisters Formation and Resuscitation
    Hyein Kim, Sejong Oh, Sooyeon Song
    Journal of Microbiology and Biotechnology.2024; 34(4): 854.     CrossRef
  • Lactobacillus plantarum supernatant inhibits growth of Riemerella anatipestifer and mediates intestinal antimicrobial defense in Muscovy ducks
    Zhaolong Li, Qing Guo, Fengqiang Lin, Cuiting Li, Lu Yan, Haiou Zhou, Yaping Huang, Binbin Lin, Bilin Xie, Zhimin Lin, Yu Huang
    Poultry Science.2024; 103(2): 103216.     CrossRef
  • Preventive effect of kiwi berry ( Actinidia arguta) on loperamide-induced constipation
    Jiyue Zhang, Bin Li, Ningxuan Gao, Haikun Li, Xingyue Cui, Hanqian Jiang, Siyi Tang, Chenyu Jin, Jinlong Tian
    Food Science and Human Wellness.2024; 13(3): 1410.     CrossRef
  • Lactobacillus from fermented bamboo shoots prevents inflammation in DSS-induced colitis mice via modulating gut microbiome and serum metabolites
    Xiangru Liu, Xiaoling Lu, Hao Nie, Jing Yan, Zhiwen Ma, Hailin Li, Shixin Tang, Qi Yin, Jingfu Qiu
    Food Science and Human Wellness.2024; 13(5): 2833.     CrossRef
  • Effectiveness of Psychobiotics in the Treatment of Psychiatric and Cognitive Disorders: A Systematic Review of Randomized Clinical Trials
    Freiser Eceomo Cruz Mosquera, Santiago Lizcano Martinez, Yamil Liscano
    Nutrients.2024; 16(9): 1352.     CrossRef
  • Impact of Thermophysical and Biological Pretreatments on Antioxidant Properties and Phenolic Profile of Broccoli Stem Products
    Claudia Bas-Bellver, Cristina Barrera, Lucía Seguí
    Foods.2024; 13(22): 3585.     CrossRef
  • Technological Trends Involving Probiotics in the Treatment of Diabetic Neuropathy: A Patent Review (2009-2022)
    Sthefane Silva Santos, Mariana Bastos de Souza, Pedro Santana Sales Lauria, Paulo José Lima Juiz, Cristiane Flora Villarreal, Max Denisson Maurício Viana
    Current Diabetes Reviews.2024;[Epub]     CrossRef
  • Causal role of gut microbiota, serum metabolites, immunophenotypes in myocarditis: a mendelian randomization study
    Kaiyuan Li, Peng Liu, Xiuqi Wang, Zhipeng Zheng, Miao Liu, Jun Ye, Li Zhu
    Frontiers in Genetics.2024;[Epub]     CrossRef
  • Lactiplantibacillus plantarum ATCC8014 Alleviates Postmenopausal Hypercholesterolemia in Mice by Remodeling Intestinal Microbiota to Increase Secondary Bile Acid Excretion
    Shurui Zhang, Ronghui Liu, Yuxin Ma, Yuting Ma, Han Feng, Xue Ding, Qichun Zhang, Yu Li, Jinjun Shan, Huimin Bian, Ruigong Zhu, Qinghai Meng
    Journal of Agricultural and Food Chemistry.2024; 72(12): 6236.     CrossRef
  • Enzymatic activities of Lactiplantibacillus plantarum: Technological and functional role in food processing and human nutrition
    Gianluca Paventi, Catello Di Martino, Thomas W. Crawford Jr, Massimo Iorizzo
    Food Bioscience.2024; 61: 104944.     CrossRef
  • Anti-Obesity and Antidiabetic Effects of Fig (Ficus carica L.) Fermented Extract Using Lactobacillus plantarum BT-LP-01
    Hwal Choi, Jihye Choi, Yuseong Jang, Young-Min Lee, Myoung-Hak Kang, Hyuck-Se Kwon, Sokho Kim, Jungkee Kwon
    Applied Sciences.2024; 14(15): 6412.     CrossRef
  • KL-Biome (Postbiotic Formulation of Lactiplantibacillus plantarum KM2) Improves Dexamethasone-Induced Muscle Atrophy in Mice
    Yu-Jin Jeong, Jong-Hoon Kim, Ye-Jin Jung, Mi-Sun Kwak, Moon-Hee Sung, Jee-Young Imm
    International Journal of Molecular Sciences.2024; 25(13): 7499.     CrossRef
  • Lactiplantibacillus plantarum LM1001 Improves Digestibility of Branched-Chain Amino Acids in Whey Proteins and Promotes Myogenesis in C2C12 Myotubes
    Youngjin Lee, Yoon Ju So, Woo-Hyun Jung, Tae-Rahk Kim, Minn Sohn, Yu-Jin Jeong, Jee-Young Imm
    Food Science of Animal Resources.2024; 44(4): 951.     CrossRef
  • Genome Sequencing Unveils Nomadic Traits of Lactiplantibacillus plantarum in Japanese Post-Fermented Tea
    Kyoka Sato, Yuichiro Ikagawa, Ryo Niwa, Hiroki Nishioka, Masanori Horie, Hitoshi Iwahashi
    Current Microbiology.2024;[Epub]     CrossRef
  • Characterization of a symbiotic beverage based on water-soluble soybean extract fermented by Lactiplantibacillus plantarum ATCC 8014
    Fernanda Weber Bordini, Júlia Cristina Fernandes, Viviane Lívia Carvalho de Souza, Elaine Cristina Galhardo, Ismael Maciel de Mancilha, Maria das Graças de Almeida Felipe
    Brazilian Journal of Microbiology.2024; 55(2): 1655.     CrossRef
  • Fermented licorice extract alleviates ulcerative colitis by inhibiting the TLR4/NF-κB pathway and rebuilding intestinal microbiota in mice
    Fuli Hu, Jingyan Chen, Yunxiang Xu, Chengcheng Zhao, Guihua Li, Tengfei Wang, Min Li, Ganzhen Deng, Xiuli Peng
    Food Bioscience.2024; 61: 104918.     CrossRef
  • The role of synbiotics in correcting gut microbiota disorders and increased intestinal permeability: A review
    Maria D. Ardatskaya
    Consilium Medicum.2024; 26(5): 332.     CrossRef
  • Multistimuli responsive microcapsules produced by the prilling/vibration technique for targeted colonic delivery of probiotics
    Vita D'Amico, Antonio Lopalco, Rosa Maria Iacobazzi, Mirco Vacca, Sonya Siragusa, Maria De Angelis, Angela Assunta Lopedota, Nunzio Denora
    International Journal of Pharmaceutics.2024; 658: 124223.     CrossRef
  • Microbiota, Gender-Affirming Hormone Therapy, and Inflammatory Biomarkers in Transgender Women with HIV: Potential Implications for Cardiovascular Disease
    Tiffany R. Glynn, Courtney A. Broedlow, Violeta Rodriguez, Nicholas Fonseca Nogueira, Valeria Londono, Theodora Brophy, Suresh Pallikkuth, Margaret Roach, Savita Pahwa, Lydia A. Fein, Barry E. Hurwitz, Deborah Jones, Maria L. Alcaide, Nichole Klatt, Claud
    Transgender Health.2024;[Epub]     CrossRef
  • Efficacy and Mechanism of Qianshan Huoxue Gao in Acute Coronary Syndrome via Regulation of Intestinal Flora and Metabolites
    Ning Zhao, Yan Ma, Xiaoxue Liang, Yu Zhang, Dacheng Hong, Ying Wang, Dong Bai
    Drug Design, Development and Therapy.2023; Volume 17: 579.     CrossRef
  • The brain-gut-microbiota interplay in depression: A key to design innovative therapeutic approaches
    Angelica Varesi, Lucrezia Irene Maria Campagnoli, Salvatore Chirumbolo, Beatrice Candiano, Adelaide Carrara, Giovanni Ricevuti, Ciro Esposito, Alessia Pascale
    Pharmacological Research.2023; 192: 106799.     CrossRef
  • Enrichment Culture but Not Metagenomic Sequencing Identified a Highly Prevalent Phage Infecting Lactiplantibacillus plantarum in Human Feces
    Xueyang Zhao, Chuqing Sun, Menglu Jin, Jingchao Chen, Lulu Xing, Jin Yan, Hailei Wang, Zhi Liu, Wei-Hua Chen, Junhua Li
    Microbiology Spectrum.2023;[Epub]     CrossRef
  • The Inhibitory Activity of Lactobacillus plantarum Supernatant against Enterobacteria, Campylobacter, and Tumor Cells
    T. A. Danilova, A. A. Adzhieva, M. V. Mezentseva, I. A. Suetina, G. A. Danilina, A. G. Minko, M. L. Dmitrieva, V. G. Zhukhovitsky
    Bulletin of Experimental Biology and Medicine.2023; 176(1): 64.     CrossRef
  • Bidirectional Interactions between Green Tea (GT) Polyphenols and Human Gut Bacteria
    Se Rin Choi, Hyunji Lee, Digar Singh, Donghyun Cho, Jin-Oh Chung, Jong-Hwa Roh, Wan-Gi Kim, Choong Hwan Lee
    Journal of Microbiology and Biotechnology.2023; 33(10): 1317.     CrossRef
  • Evaluation of Probiotic Properties of Novel Brazilian Lactiplantibacillus plantarum Strains
    Nina Dias Coelho-Rocha, Luís Cláudio Lima de Jesus, Fernanda Alvarenga Lima Barroso, Tales Fernando da Silva, Enio Ferreira, José Eduardo Gonçalves, Flaviano dos Santos Martins, Rodrigo Dias de Oliveira Carvalho, Debmalya Barh, Vasco Ariston de Carvalho A
    Probiotics and Antimicrobial Proteins.2023; 15(1): 160.     CrossRef
  • Probiotics mitigate kidney damage after exposure to Sri Lanka's local groundwater from chronic kidney disease with uncertain etiology (CKDu) prevalent area in zebrafish
    Ling-Kang Bu, Pan-Pan Jia, Wei-Guo Li, Yong-Zhi Li, Tian-Yun Li, De-Sheng Pei
    Aquatic Toxicology.2023; 262: 106671.     CrossRef
  • Effect of Lactobacillus plantarum LMT1-48 on Body Fat in Overweight Subjects: A Randomized, Double-Blind, Placebo-Controlled Trial
    Minji Sohn, Hyeyoung Jung, Woo Shun Lee, Tai Hoon Kim, Soo Lim
    Diabetes & Metabolism Journal.2023; 47(1): 92.     CrossRef
  • Lactobacillus plantarum surface-displayed FomA (Fusobacterium nucleatum) protein generally stimulates protective immune responses in mice
    Xiaoyu Zhang, Huijie Xiao, Huaiyu Zhang, Yang Jiang
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Modulatory effects of Lactiplantibacillus plantarum on chronic metabolic diseases
    Lei Tian, Ruixiang Zhao, Xinyi Xu, Zhiwei Zhou, Xiaofang Xu, Dongmei Luo, Zhiqiang Zhou, Yu Liu, Ariel Kushmaro, Robert S. Marks, András Dinnyés, Qun Sun
    Food Science and Human Wellness.2023; 12(4): 959.     CrossRef
  • The Role of Probiotics In Tissue Engineering And Regenerative Medicine
    Ali Golchin, Parviz Ranjbarvan, Shima Parviz, Amene Shokati, Roya Naderi, Yousef Rasmi, Samaneh Kiani, Faezeh Moradi, Fahimeh Heidari, Zohreh Saltanatpour, Akram Alizadeh
    Regenerative Medicine.2023; 18(8): 635.     CrossRef
  • Encapsulation of Lactobacillus plantarum in casein-chitosan microparticles facilitates the arrival to the colon and develops an immunomodulatory effect
    Rebeca Peñalva, Ana Luisa Martínez-López, Carlos Gamazo, Carlos J. Gonzalez-Navarro, Carolina González-Ferrero, Raquel Virto-Resano, Ana Brotons-Canto, Ana Isabel Vitas, Maria Collantes, Ivan Peñuelas, Juan M. Irache
    Food Hydrocolloids.2023; 136: 108213.     CrossRef
  • Lactobacillus plantarum Generate Electricity through Flavin Mononucleotide-Mediated Extracellular Electron Transfer to Upregulate Epithelial Type I Collagen Expression and Thereby Promote Microbial Adhesion to Intestine
    Binderiya Ganzorig, Enkhbat Zayabaatar, Minh Tan Pham, Shinta Marito, Chun-Ming Huang, Yu-Hsiang Lee
    Biomedicines.2023; 11(3): 677.     CrossRef
  • Effects of systemic Bifidobacterium longum and Lactobacillus rhamnosus probiotics on the ligature-induced periodontitis in rat
    Ying-Wu Chen, Ming-Lun Lee, Cheng-Yang Chiang, Earl Fu
    Journal of Dental Sciences.2023; 18(4): 1477.     CrossRef
  • Antidepressive Effect of Natural Products and Their Derivatives Targeting BDNF-TrkB in Gut–Brain Axis
    Humna Liaqat, Amna Parveen, Sun-Yeou Kim
    International Journal of Molecular Sciences.2022; 23(23): 14968.     CrossRef
  • Lactobacillus plantarum-derived extracellular vesicles protect against ischemic brain injury via the microRNA-101a-3p/c-Fos/TGF-β axis
    Zhang Yang, Zidan Gao, Zhennai Yang, Yifan Zhang, Hongqun Chen, Xuexia Yang, Xuming Fang, Yingwu Zhu, Jiayan Zhang, Fu Ouyang, Jun Li, Gang Cai, Yuan Li, Xiang Lin, Ruihan Ni, Chong Xia, Ruihua Wang, Xiaofang Shi, Lan Chu
    Pharmacological Research.2022; 182: 106332.     CrossRef
  • Lactobacillus plantarum WSJ-06 alleviates neurobehavioral injury induced by lead in mice through the gut microbiota
    Yunting Li, Anfei Liu, Lixuan Chen, Yang Xiang, Dingbang Huang, Wanwen Huang, Zhenhui Chen, Hongying Fan, Xiaojing Meng
    Food and Chemical Toxicology.2022; 167: 113308.     CrossRef
  • Evaluation of the Probiotic In Vitro Potential of Lactic Acid-Producing Bacteria from Canine Vagina: Possible Role in Vaginal Health
    Brian Morales, Livia Spadetto, Maria Àngels Calvo, Marc Yeste, Leonardo Arosemena, Teresa Rigau, Maria Montserrat Rivera del Alamo
    Animals.2022; 12(6): 796.     CrossRef
  • Light-Sensitive Lactococcus lactis for Microbe–Gut–Brain Axis Regulating via Upconversion Optogenetic Micro-Nano System
    Huizhuo Pan, Tao Sun, Meihui Cui, Ning Ma, Chun Yang, Jing Liu, Gaoju Pang, Baona Liu, Lianyue Li, Xinyu Zhang, Weiwen Zhang, Jin Chang, Hanjie Wang
    ACS Nano.2022; 16(4): 6049.     CrossRef
  • Probiotics: The Next Dietary Strategy against Brain Aging
    Jia-Sin Ong, Lee-Ching Lew, Yan-Yan Hor, Min-Tze Liong
    Preventive Nutrition and Food Science.2022; 27(1): 1.     CrossRef
  • Lactiplantibacillus plantarum ST-III-fermented milk improves autistic-like behaviors in valproic acid-induced autism spectrum disorder mice by altering gut microbiota
    Yilin Zhang, Min Guo, Hongfa Zhang, Yuezhu Wang, Ruiying Li, Zhenmin Liu, Huajun Zheng, Chunping You
    Frontiers in Nutrition.2022;[Epub]     CrossRef
  • In Vitro Assessment of Bio-Functional Properties from Lactiplantibacillus plantarum Strains
    Francesco Letizia, Gianluca Albanese, Bruno Testa, Franca Vergalito, Diletta Bagnoli, Catello Di Martino, Petronia Carillo, Lucia Verrillo, Mariantonietta Succi, Elena Sorrentino, Raffaele Coppola, Patrizio Tremonte, Silvia Jane Lombardi, Roberto Di Marco
    Current Issues in Molecular Biology.2022; 44(5): 2321.     CrossRef
  • The probiotic potential of Lactobacillus plantarum strain RW1 isolated from canine faeces
    Abdul Raheem, Mingyan Wang, Jianwei Zhang, Lin Liang, Ruiying Liang, Yajie Yin, Yali Zhu, Weifang Yang, Liang Wang, Xueze Lv, Yaxiong Jia, Tong Qin, Guangzhi Zhang
    Journal of Applied Microbiology.2022; 132(3): 2306.     CrossRef
  • Lactobacillus plantarum supplementation alleviates liver and intestinal injury in parenteral nutrition‐fed piglets
    Weipeng Wang, Ying Wang, Yang Liu, Xinbei Tian, Shanshan Chen, Ying Lu, Bo Wu, Yongtao Xiao, Wei Cai
    Journal of Parenteral and Enteral Nutrition.2022; 46(8): 1932.     CrossRef
  • In Vitro and In Vivo Assessments of Anti-Hyperglycemic Properties of Soybean Residue Fermented with Rhizopus oligosporus and Lactiplantibacillus plantarum
    Istiqomah Hariyanto, Chia-Wen Hsieh, Yueh-Han Hsu, Lih-Geng Chen, ChiShih Chu, Brian Bor-Chun Weng
    Life.2022; 12(11): 1716.     CrossRef
  • In-process real-time probiotic phenotypic strain identity tracking: The use of Fourier transform infrared spectroscopy
    Francesca Deidda, Miriam Cordovana, Nicole Bozzi Cionci, Teresa Graziano, Diana Di Gioia, Marco Pane
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • The Microbiome–Gut–Brain Axis and Dementia: A Bibliometric Analysis
    He-Li Sun, Yuan Feng, Qinge Zhang, Jia-Xin Li, Yue-Ying Wang, Zhaohui Su, Teris Cheung, Todd Jackson, Sha Sha, Yu-Tao Xiang
    International Journal of Environmental Research and Public Health.2022; 19(24): 16549.     CrossRef
  • Hypolipidemic and hypoglycemic nature of lactobacillus strains in fermented vegetable and dairy products
    Kriti Ghatani, Subarna Thapa, Priya Chakraborty
    Frontiers in Food Science and Technology.2022;[Epub]     CrossRef
  • Mathematical Modeling and Optimization of Lactobacillus Species Single and Co-Culture Fermentation Processes in Wheat and Soy Dough Mixtures
    Eva-H. Dulf, Dan C. Vodnar, Alex Danku, Adrian Gheorghe Martău, Bernadette-Emőke Teleky, Francisc V. Dulf, Mohamed Fawzy Ramadan, Ovidiu Crisan
    Frontiers in Bioengineering and Biotechnology.2022;[Epub]     CrossRef
  • Mechanisms Underlying the Interaction Between Chronic Neurological Disorders and Microbial Metabolites via Tea Polyphenols Therapeutics
    Mengyu Hong, Lu Cheng, Yanan Liu, Zufang Wu, Peng Zhang, Xin Zhang
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Probiotics Reduce Vaginal Candidiasis in Pregnant Women via Modulating Abundance of Candida and Lactobacillus in Vaginal and Cervicovaginal Regions
    Xin Ang, Uma Mageswaran, Yi Chung, Boon Lee, Siti Azhar, Nurhanis Roslan, Ili Saufian, Nor Mustaffa, Ermadina Kalam, Aini Ibrahim, Normala Abdul Wahid, Zakuan Deris, Chern-Ein Oon, Wan Adnan, Salina Sany, Min-Tze Liong
    Microorganisms.2022; 10(2): 285.     CrossRef
  • Gut Microbiome and Metabolome Variations in Self-Identified Muscle Builders Who Report Using Protein Supplements
    Lauri O. Byerley, Karyn M. Gallivan, Courtney J. Christopher, Christopher M. Taylor, Meng Luo, Scot E. Dowd, Gregory M. Davis, Hector F. Castro, Shawn R. Campagna, Kristin S. Ondrak
    Nutrients.2022; 14(3): 533.     CrossRef
  • Zinc Biofortified Cowpea (Vigna unguiculata L. Walp.) Soluble Extracts Modulate Assessed Cecal Bacterial Populations and Gut Morphology In Vivo (Gallus gallus)
    Mariana Juste Contin Gomes, Hércia Stampini Duarte Martino, Nikolai Kolba, Jacquelyn Cheng, Nikita Agarwal, Maurisrael de Moura Rocha, Elad Tako
    Frontiers in Bioscience-Landmark.2022;[Epub]     CrossRef
  • Changes in Selected Quality Indices in Microbially Fermented Commercial Almond and Oat Drinks
    Grzegorz Dąbrowski, Aurelija Paulauskienė, Aldona Baltušnikienė, Lucyna Kłębukowska, Sylwester Czaplicki, Iwona Konopka
    Applied Sciences.2022; 12(19): 9983.     CrossRef
  • Heart Failure Severity Closely Correlates with Intestinal Dysbiosis and Subsequent Metabolomic Alterations
    Martina E. Spehlmann, Ashraf Y. Rangrez, Dhiraj P. Dhotre, Nesrin Schmiedel, Nikita Chavan, Corinna Bang, Oliver J. Müller, Yogesh S. Shouche, Andre Franke, Derk Frank, Norbert Frey
    Biomedicines.2022; 10(4): 809.     CrossRef
  • Combined 1H NMR fecal metabolomics and 16S rRNA gene sequencing to reveal the protective effects of Gushudan on kidney-yang-deficiency-syndrome rats via gut-kidney axis
    Lin Tong, Qisheng Feng, Qing Lu, Jing Zhang, Zhili Xiong
    Journal of Pharmaceutical and Biomedical Analysis.2022; 217: 114843.     CrossRef
  • Camellia (Camellia oleifera bel.) seed oil reprograms gut microbiota and alleviates lipid accumulation in high fat-fed mice through the mTOR pathway
    Jing Gao, Li Ma, Jie Yin, Gang Liu, Jie Ma, SiTing Xia, SaiMing Gong, Qi Han, TieJun Li, YongZhong Chen, YuLong Yin
    Food & Function.2022; 13(9): 4977.     CrossRef
  • Long-Chain Acylcholines Link Butyrylcholinesterase to Regulation of Non-neuronal Cholinergic Signaling
    Jason M. Kinchen, Robert P. Mohney, Kirk L. Pappan
    Journal of Proteome Research.2022; 21(3): 599.     CrossRef
  • Investigation of Immunostimulatory Effects of Heat-Treated Lactiplantibacillus plantarum LM1004 and Its Underlying Molecular Mechanism
    Won-Young Bae, Woo-Hyun Jung, So Lim Shin, Seulgi Kwon, Minn Sohn, Tae-Rahk Kim
    Food Science of Animal Resources.2022; 42(6): 1031.     CrossRef
  • Genomic and Phenotypic Evaluation of Potential Probiotic Pediococcus Strains with Hypocholesterolemic Effect Isolated from Traditional Fermented Food
    Shadi Pakroo, Armin Tarrah, Jacopo Bettin, Viviana Corich, Alessio Giacomini
    Probiotics and Antimicrobial Proteins.2022; 14(6): 1042.     CrossRef
  • Antibacterial Activity of Lactobacillus plantarum Supernatant on Non-Fermenting Gram-Negative Bacteria
    T. A. Danilova, G. A. Danilina, A. A. Adzhieva, N. B. Polyakov, V. G. Zhukhovitskii
    Bulletin of Experimental Biology and Medicine.2022; 173(1): 59.     CrossRef
  • Oral Vaccination of Mice With Trichinella spiralis Putative Serine Protease and Murine Interleukin-4 DNA Delivered by Invasive Lactiplantibacillus plantarum Elicits Protective Immunity
    Ying Xue, Bo Zhang, Nan Wang, Hai-Bin Huang, Yu Quan, Hui-Nan Lu, Zhi-Yu Zhu, Jun-Yi Li, Tian-Xu Pan, Yue Tang, Yan-Long Jiang, Chun-Wei Shi, Gui-Lian Yang, Chun-Feng Wang
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Revisiting the Development of Vaccines Against Pathogenic Leptospira: Innovative Approaches, Present Challenges, and Future Perspectives
    Giovana C. Barazzone, Aline F. Teixeira, Bruna O. P. Azevedo, Deborah K. Damiano, Marcos P. Oliveira, Ana L. T. O. Nascimento, Alexandre P. Y. Lopes
    Frontiers in Immunology.2022;[Epub]     CrossRef
  • Vitamin E and Lactobacillus Provide Protective Effects Against Liver Injury Induced by HgCl2: Role of CHOP, GPR87, and mTOR Proteins
    Ahlam Alhusaini, Shahad Alghilani, Waad Alhuqbani, Iman H. Hasan
    Dose-Response.2021;[Epub]     CrossRef
  • Effects of a Mixed Limosilactobacillus fermentum Formulation with Claimed Probiotic Properties on Cardiometabolic Variables, Biomarkers of Inflammation and Oxidative Stress in Male Rats Fed a High-Fat Diet
    Micaelle Oliveira de Luna Freire, Luciana Caroline Paulino do Nascimento, Kataryne Árabe Rimá de Oliveira, Alisson Macário de Oliveira, Thiago Henrique Napoleão, Marcos dos Santos Lima, Cláudia Jacques Lagranha, Evandro Leite de Souza, José Luiz de Brito
    Foods.2021; 10(9): 2202.     CrossRef
  • Hypoglycemic and Hypolipidemic Activity of Polygonatum sibiricum Fermented with Lactobacillus brevis YM 1301 in Diabetic C57BL/6 Mice
    Caiyun Li, Jixia Li, Yaxian Shang, Yao Wang, Jingru Gao, Nan Xue, Chunying Huang, Farong Li, Jia Li
    Journal of Medicinal Food.2021; 24(7): 720.     CrossRef
  • Safety Assessment of Lactiplantibacillus (formerly Lactobacillus) plantarum Q180
    Yoo Jin Kwon, Byung Hee Chun, Hye Su Jung, Jaeryang Chu, Hyunchae Joung, Sung Yurb Park, Byoung Kook Kim, Che Ok Jeon
    Journal of Microbiology and Biotechnology.2021; 31(10): 1420.     CrossRef
  • Application and Future Prospective of Lactic Acid Bacteria as Natural Additives for Silage Production—A Review
    Ilavenil Soundharrajan, Hyung Soo Park, Sathya Rengasamy, Ravikumar Sivanesan, Ki Choon Choi
    Applied Sciences.2021; 11(17): 8127.     CrossRef
  • Treating autism spectrum disorder by intervening with gut microbiota
    Tingting Tu, Changlin Zhao
    Journal of Medical Microbiology .2021;[Epub]     CrossRef
  • Some characteristics of flavor of moromi vinegar fermented by a lactic acid bacterium and its effects on obesity
    Yuichi Nodake, Satomi Toda, Hitomi Iba, Tomonori Taira, Choryo Uema, Toki Taira
    Journal for the Integrated Study of Dietary Habits.2021; 31(4): 221.     CrossRef
  • The Use of the Probiotic Lactiplantibacillus plantarum 299v in the Technology of Non-Dairy Ice Cream Based on Avocado
    Ada Krawęcka, Justyna Libera, Agnieszka Latoch
    Foods.2021; 10(10): 2492.     CrossRef
  • The emerging role of probiotics as a mitigation strategy against coronavirus disease 2019 (COVID-19)
    Rasoul Mirzaei, Adeleh Attar, Saher Papizadeh, Ali Salimi Jeda, Seyed Reza Hosseini-Fard, Elaheh Jamasbi, Sima Kazemi, Saman Amerkani, Gholam Reza Talei, Pouya Moradi, Saba Jalalifar, Rasoul Yousefimashouf, Mohammad Akhter Hossain, Hossein Keyvani, Sajad
    Archives of Virology.2021; 166(7): 1819.     CrossRef
  • Neuroprotective Effects of Heat-Killed Lactobacillus plantarum 200655 Isolated from Kimchi Against Oxidative Stress
    Min-Jeong Cheon, Na-Kyoung Lee, Hyun-Dong Paik
    Probiotics and Antimicrobial Proteins.2021; 13(3): 788.     CrossRef
  • Evaluation of the in vitro effects of the increasing inclusion levels of yeast β-glucan, a casein hydrolysate and its 5 kDa retentate on selected bacterial populations and strains commonly found in the gastrointestinal tract of pigs
    Brigkita Venardou, John V. O'Doherty, Mary J. McDonnell, Anindya Mukhopadhya, Claire Kiely, Marion T. Ryan, Torres Sweeney
    Food & Function.2021; 12(5): 2189.     CrossRef
  • Effect of Microencapsulation on Survival at Simulated Gastrointestinal Conditions and Heat Treatment of a Non Probiotic Strain, Lactiplantibacillus plantarum 48M, and the Probiotic Strain Limosilactobacillus reuteri DSM 17938
    Clorinda Malmo, Irene Giordano, Gianluigi Mauriello
    Foods.2021; 10(2): 217.     CrossRef
  • Treatment with mixed probiotics induced, enhanced and diversified modulation of the gut microbiome of healthy rats
    Qiuwen He, Jiating Huang, Tingting Zheng, Dan Lin, Heping Zhang, Jun Li, Zhihong Sun
    FEMS Microbiology Ecology.2021;[Epub]     CrossRef
  • Bacillus amyloliquefaciens exopolysaccharide preparation induces glucagon-like peptide 1 secretion through the activation of bitter taste receptors
    Wei-Wen Sung, Jing-Hong Tu, Jyun-Sian Yu, Marisa Zakiya Ulfa, Jia-Hong Chang, Hsueh-Ling Cheng
    International Journal of Biological Macromolecules.2021; 185: 562.     CrossRef
  • Positive metabolic effects of selected probiotic bacteria on diet‐induced obesity in mice are associated with improvement of dysbiotic gut microbiota
    Ilavenil Soundharrajan, Palaniselvam Kuppusamy, Srigopalram Srisesharam, Jeong Chae Lee, Ravikumar Sivanesan, Dahye Kim, Ki Choon Choi
    The FASEB Journal.2020; 34(9): 12289.     CrossRef
  • Characterization of transcriptional response of Lactobacillus plantarum under acidic conditions provides insight into bacterial adaptation in fermentative environments
    Sera Jung, Jong-Hee Lee
    Scientific Reports.2020;[Epub]     CrossRef
  • Mein Körper, meine Moleküle, meine Mikroben
    Christoph Herrmann-Lingen
    PDP - Psychodynamische Psychotherapie.2020; 19(4): 369.     CrossRef
  • The Fatty-Acid Hydratase Activity of the Most Common Probiotic Microorganisms
    Stefano Serra, Davide De Simeis, Antonio Castagna, Mattia Valentino
    Catalysts.2020; 10(2): 154.     CrossRef
  • Exploitation of Lactic Acid Bacteria and Baker’s Yeast as Single or Multiple Starter Cultures of Wheat Flour Dough Enriched with Soy Flour
    Bernadette-Emőke Teleky, Adrian Gheorghe Martău, Floricuța Ranga, Felicia Chețan, Dan C. Vodnar
    Biomolecules.2020; 10(5): 778.     CrossRef
  • A recombinant Lactobacillus plantarum strain expressing the spike protein of SARS-CoV-2
    Maopeng Wang, Tingting Fu, Jiayi Hao, Letian Li, Mingyao Tian, Ningyi Jin, Linzhu Ren, Chang Li
    International Journal of Biological Macromolecules.2020; 160: 736.     CrossRef
  • Cerumen microbial community shifts between healthy and otitis affected dogs
    Giorgia Borriello, Rubina Paradiso, Carlotta Catozzi, Roberta Brunetti, Paola Roccabianca, Marita Georgia Riccardi, Bianca Cecere, Cristina Lecchi, Giovanna Fusco, Fabrizio Ceciliani, Giorgio Galiero, Simon Clegg
    PLOS ONE.2020; 15(11): e0241447.     CrossRef
  • Lactobacillus-derived metabolites enhance the antitumor activity of 5-FU and inhibit metastatic behavior in 5-FU-resistant colorectal cancer cells by regulating claudin-1 expression
    JaeJin An, Eun-Mi Ha
    Journal of Microbiology.2020; 58(11): 967.     CrossRef
  • Antiviral Activity of Fecal Water Samples from HIV-1 Infected Subjects Treated with a Specific Probiotic Formulation
    Francesca Falasca, Eugenio Nelson Cavallari, Giuseppe Pietro Innocenti, Carolina Scagnolari, Ivano Mezzaroma, Letizia Santinelli, Giancarlo Ceccarelli, Vincenzo Vullo, Ombretta Turriziani, Gabriella d'Ettorre
    Current HIV Research.2019; 17(3): 183.     CrossRef
  • Dietary polyphenols to combat the metabolic diseases via altering gut microbiota
    Vemana Gowd, Naymul Karim, Mohammad Rezaul Islam Shishir, Lianghua Xie, Wei Chen
    Trends in Food Science & Technology.2019; 93: 81.     CrossRef
  • Antimicrobial Activity of Supernatant of Lactobacillus plantarum against Pathogenic Microorganisms
    Т. A. Danilova, A. A. Adzhieva, G. A. Danilina, N. B. Polyakov, A. I. Soloviev, V. G. Zhukhovitsky
    Bulletin of Experimental Biology and Medicine.2019; 167(6): 751.     CrossRef
  • Mechanisms Underlying the Anti-Depressive Effects of Regular Tea Consumption
    Dylan O’Neill Rothenberg, Lingyun Zhang
    Nutrients.2019; 11(6): 1361.     CrossRef
Research Support, Non-U.S. Gov't
Benzaldehyde as an insecticidal, antimicrobial, and antioxidant compound produced by Photorhabdus temperata M1021
Ihsan Ullah , Abdul Latif Khan , Liaqat Ali , Abdur Rahim Khan , Muhammad Waqas , Javid Hussain , In-Jung Lee , Jae-Ho Shin
J. Microbiol. 2015;53(2):127-133.   Published online January 28, 2015
DOI: https://doi.org/10.1007/s12275-015-4632-4
  • 612 View
  • 0 Download
  • 111 Crossref
AbstractAbstract
The Photorhabdus temperata M1021 secretes toxic compounds that kill their insect hosts by arresting immune responses. Present study was aimed to purify the insecticidal and antimicrobial compound(s) from the culture extract of P. temperata M1021 through bioassay guided fractionation. An ethyl acetate (EtOAc) extract of the P. temperata M1021 exhibited 100% mortality in Galleria mellonella larvae within 72 h. In addition, EtOAc extract and bioactive compound 1 purified form the extract through to column chromatography, showed phenol oxidase inhibition up to 60% and 80% respectively. The analysis of 1H and 13C NMR spectra revealed the identity of pure compound as "benzaldehyde". The benzaldehyde showed insecticidal activity against G. mellonella in a dose-dependent manner and 100% insect mortality was observed at 108 h after injection of 8 mM benzaldehyde. In a PO inhibition assay, 4, 6, and 8 mM concentrations of benzaldehyde were found to inhibit PO activity about 15%, 42%, and 80% respectively. In addition, nodule formation was significantly (P < 0.05) inhibited by 4, 6, and 8 mM of benzaldehyde as compare to control. Moreover, benzaldehyde was found to have great antioxidant activity and maximum antioxidant activity was 52.9% at 8 mM benzaldehyde as compare to control. Antimicrobial activity was assessed by MIC values ranged from 6 mM 10 mM for bacterial strains and 8 mM to 10 mM for fungal strains. The
results
suggest that benzaldehyde could be applicable for developing novel insecticide for agriculture use.

Citations

Citations to this article as recorded by  
  • Analysis of the main quality and bioactive components of the seed oil of Camellia vietnamensis from the different producing regions
    Chenyu Jiang, Yijia Gao, Shaopu Shi, Yu Zhou, Muhammad Sajjad, Kaibing Zhou, Jing Chen
    Journal of Food Composition and Analysis.2025; 143: 107620.     CrossRef
  • Antibiotic potential and metabolic modulation of Bacillus velezensis VTRNT 01 in response to bacterial elicitors
    Thanh-Dung Nguyen, Huu-Nghia Duong, Thi-Pha Nguyen, Phu-Tho Nguyen, Huu-Hiep Nguyen, Thi-Tho Nguyen, Ha-Giang Pham, Dieu-Hien Truong, Huu-Thanh Nguyen
    World Journal of Microbiology and Biotechnology.2025;[Epub]     CrossRef
  • Synthesis of novel hexahydroquinolines and evaluation of their antibacterial effects on bacteria inducing skin wound infections, accompanied by quantum mechanical calculations
    Fateme Khojaste, Nahid Shajari, Parvin Eskandari, Mohammad Reza Farahpour, Hooriye Yahyaei
    Results in Chemistry.2025; 16: 102357.     CrossRef
  • The bacterial symbionts of Entomopathogenic nematodes and their role in symbiosis and pathogenesis
    S. Patricia Stock, Selçuk Hazir
    Journal of Invertebrate Pathology.2025; 211: 108295.     CrossRef
  • Enhancing kombucha functionality: Utilizing dried pineapple peels and cores as an alternative ingredient for improved antioxidant and antimicrobial properties
    Haruthairat Kitwetcharoen, Nuttaporn Chamnipa, Sudarat Thanonkeo, Preekamol Klanrit, Patcharaporn Tippayawat, Poramaporn Klanrit, Poramate Klanrit, Mamoru Yamada, Pornthap Thanonkeo
    LWT.2025; 216: 117358.     CrossRef
  • Alpha-ketoacid decarboxylases: Diversity, structures, reaction mechanisms, and applications for biomanufacturing of platform chemicals and fuels
    Khanh Ha, Seunghyun Ryu, Cong T. Trinh
    Biotechnology Advances.2025; 81: 108531.     CrossRef
  • Amendment of Microbial Metabolites to Develop Next‐Generation Formulations for Enhancing Plant Growth and Resilience
    Sonal Srivastava, Annapurna Bhattacharjee, Vaibhav C. Agre, Shilpi Sharma
    Physiologia Plantarum.2025;[Epub]     CrossRef
  • New Contributions to Deepen the Quality-Based Safety Assessment in the Consumption of Edible Nasturtium Flowers—The Role of Volatilome
    Rosa Perestrelo, Maria da Graça Lopes, Alda Pereira da Silva, Maria do Céu Costa, José S. Câmara
    Life.2025; 15(7): 1053.     CrossRef
  • Analytical Characterization and Pharmacokinetic Insight of Bioactive Compounds from Champia parvula and Moringa oleifera for Biocontrol of Blue Mold in Apple Fruits
    Eman A. Alwaleed, Mashail N. Alzain, Naglaa Loutfy, Amany A. El-Shahir
    Plants.2025; 14(14): 2104.     CrossRef
  • Insecticidal effect of Photorhabdus temperata subsp. thracensis derived-secondary metabolites against three stored product pests
    Hilal Susurluk, Merve İlktan, Selenay Sepin, Selen Gökçe Hasdemir, Alperen Kaan Bütüner, Elif Uz Yıldırım, İsmail Alper Susurluk, Umut Toprak
    Journal of Stored Products Research.2025; 114: 102782.     CrossRef
  • Diospyros rhodocalyx Kurz induces mitochondrial-mediated apoptosis via BAX, Bcl-2, and caspase-3 pathways in LNCaP human prostate cancer cell line
    Chayisara Phongsuwichetsak, Thummaruk Suksrichavalit, Chawalit Chatupheeraphat, Warawan Eiamphungporn, Sakda Yainoy, Vichanan Yamkamon
    PeerJ.2024; 12: e17637.     CrossRef
  • Beware glowing cadavers: bioluminescence of nematode symbiont Photorhabdus protects nematode-infected host cadavers from nocturnal scavengers
    Maria D. Cassells, Sophie Labaude, Christine T. Griffin
    Frontiers in Ecology and Evolution.2024;[Epub]     CrossRef
  • Damage to the host cadaver, simulating the effects of scavenging, differentially affects fitness of entomopathogenic nematode species
    Maria D. Cassells, Niamh Treanor, Emigdio Jordán Muñoz-Adalia, Christine T. Griffin
    Journal of Invertebrate Pathology.2024; 207: 108217.     CrossRef
  • Scolopia crenata Leaf Essential Oil as a Rich and Novel Source of Benzaldehyde
    Soumya Swarup Panda, Omprakash Mohanta, Prabhat Kumar Das, Ambika Sahoo, Sudipta Jena, Asit Ray, Sanghamitra Nayak, Pratap Chandra Panda
    Chemistry of Natural Compounds.2024; 60(6): 1169.     CrossRef
  • Photocatalytic high-effective removal and recovery of uranium induced by benzyl alcohol with low cost and environment-kind
    Jiahui Hang, Lang Chen, Jinyang Kang, Yu Luo, Yufei Yue, Heng Ai, Qin Song, Yuanhua Wang, Yongdong Jin, Chuanqin Xia
    Chemical Engineering Journal.2024; 498: 155078.     CrossRef
  • Scaling the polymerization of polyaldehydes through continuous flow synthesis
    Jared M. Schwartz, Paul A. Kohl, Anthony Engler
    MRS Communications.2024; 14(5): 970.     CrossRef
  • Comparison of Growth and Metabolomic Profiles of Two Afforestation Cypress Species Cupressus chengiana and Platycladus orientalis Grown at Minjiang Valley in Southwest China
    Zhengqiao Liao, Lijun Zhu, Lei Liu, Jürgen Kreuzwieser, Christiane Werner, Baoguo Du
    Metabolites.2024; 14(8): 453.     CrossRef
  • Phytochemical Composition and Antimicrobial Efficacy of Salvadora persica Root Extracts Against Carbapenem-Resistant Acinetobacter baumannii
    Wan Alif Syazwani Wan Alias, Norzila Ismail, Habsah B Hasan, Nik Rozainah Nik Abdul Ghani, Mohammed H Abdulrazak, Siti Asma Hassan
    Cureus.2024;[Epub]     CrossRef
  • Spatial and Temporal Disparity Analyses of Glycosylated Benzaldehyde and Identification and Expression Pattern Analyses of Uridine Diphosphate Glycosyltransferase Genes in Prunus mume
    Haotian Jia, Xiaoyun Geng, Lina Fan, Xin Li, Jiao Wang, Ruijie Hao
    Plants.2024; 13(5): 703.     CrossRef
  • Influence of a Wood Substrate on the Profile of Volatile Organic Compounds Produced by White Rot Fungus Trametes hirsuta LE-BIN 072
    A. V. Shabaev, T. V. Fedorova
    Applied Biochemistry and Microbiology.2024; 60(6): 1240.     CrossRef
  • RETRACTED: Chemical characterization, in vivo anti-oxidant, anti-inflammatory and anti-apoptotic properties of Peperomia pellucida in modulating vascular tone in Swiss mice exposed to aluminium chloride
    Jerome Ndudi Asiwe, Godwin D. Yovwin, Vincent-junior Onoriode Igben, Blessing Abe, Sokiprim Akoko, Benjamin Oritsemuelebi, Joseph Chimezie, Anthony Emeka Ojieh, Gwendolin Dagogo
    Pharmacological Research - Natural Products.2024; 3: 100034.     CrossRef
  • Portuguese Grapevine Leaves: A Neglected By-Product with High Potential
    Carla Sousa, Carla Moutinho, Carla Matos, Ana Ferreira Vinha
    Applied Sciences.2024; 14(21): 9803.     CrossRef
  • Encapsulation of Benzaldehyde Produced by the Eco-Friendly Degradation of Amygdalin in the Apricot Kernel Debitterizing Wastewater
    Lei Song, Juan Francisco García Martín, Qing-An Zhang
    Foods.2024; 13(3): 437.     CrossRef
  • Anti-foam cell activity of metabolites of a bacterium isolated from yogurt
    Soudipta Pramanik, Alok Kumar Sil
    Food Science and Biotechnology.2024; 33(11): 2597.     CrossRef
  • Endophytic Entomopathogenic Fungi: Their Role in Enhancing Plant Resistance, Managing Insect Pests, and Synergy with Management Routines
    Krishnamoorthy Aravinthraju, Mookiah Shanthi, Marimuthu Murugan, Ramasamy Srinivasan, Lourena Arone Maxwell, Narayanan Manikanda Boopathi, Rangasamy Anandham
    Journal of Fungi.2024; 10(12): 865.     CrossRef
  • Bacterial Allies in Agricultural Defense: Evaluating Xenorhabdus and Photorhabdus Supernatants Against Phytophthora infestans and Monilinia laxa
    Derya Uluğ
    Düzce Üniversitesi Bilim ve Teknoloji Dergisi.2024; 12(4): 2131.     CrossRef
  • Antimicrobial Activities of Symbiotic and Non-symbiotic Bacteria Associated with the Entomopathogenic Nematode, Steinernema feltiae
    Mohammed Alorabi
    Journal of Pure and Applied Microbiology.2024; 18(2): 1110.     CrossRef
  • Reusable Metal Bound Polystyrene-Anchored Thiophene-2-carboxaldehyde Catalysts for Efficient Oxidation of Benzyl Alcohol
    S. Kumari, P. K. Gupta, R. K. Rawal, S. Kumar
    Russian Journal of General Chemistry.2024; 94(12): 3401.     CrossRef
  • Inhibition and biocontrol potential of Ochrobactrum pseudogrignonense NC1 against four Phytophthora species
    Jinming Liu, Shiyu Zhang, Haikun Ma, Jun Huang, Meichun Xiang, Xingzhong Liu
    The Journal of General and Applied Microbiology.2023; 69(6): 327.     CrossRef
  • Valorization of loquat seeds by hydrothermal carbonization for the production of hydrochars and aqueous phases as added-value products
    Dimitris Kalderis, Özkan Görmez, Barış Saçlı, Selda Doğan Çalhan, Belgin Gözmen
    Journal of Environmental Management.2023; 344: 118612.     CrossRef
  • Oxidation of Aldehydes Used as Food Additives by Peroxynitrite
    Clara I. Alcolado, Luis Garcia-Rio, Juan C. Mejuto, Inmaculada Moreno, Francisco J. Poblete, Juan Tejeda
    Antioxidants.2023; 12(3): 743.     CrossRef
  • Effect of 4-Ethylbenzaldehyde from the Volatilome of Annona muricata on Meloidogyne incognita
    Letícia L. de Paula, Vicente P. Campos, Willian C. Terra, Márcio P. Pedroso, Aline F. Barros, Paulo V. M. Pacheco, Maysa S. G. da Silva
    Plant Disease.2023; 107(8): 2352.     CrossRef
  • Molecular Characterization of Some Bacillus Species from Vegetables and Evaluation of Their Antimicrobial and Antibiotic Potency
    Moldir Koilybayeva, Zhanserik Shynykul, Gulbaram Ustenova, Symbat Abzaliyeva, Mereke Alimzhanova, Akerke Amirkhanova, Aknur Turgumbayeva, Kamilya Mustafina, Gulnur Yeleken, Karlygash Raganina, Elmira Kapsalyamova
    Molecules.2023; 28(7): 3210.     CrossRef
  • Isolation, Identification and Antimicrobial Activities of Four Bacteria Associated with Entomopathogenic Nematodes, Steinernema spp.
    Othman M. Alzahrani
    Journal of Pure and Applied Microbiology.2023; 17(1): 309.     CrossRef
  • Phytomediated Selenium Nanoparticles Improved Physio-morphological, Antioxidant, and Oil Bioactive Compounds of Sesame under Induced Biotic Stress
    Ilyas Ahmad, Zohaib Younas, Zia-ur-Rehman Mashwani, Naveed Iqbal Raja, Abida Akram
    ACS Omega.2023; 8(3): 3354.     CrossRef
  • ZIF-8 encapsulation improves the antifungal activity of benzaldehyde and methyl anthranilate in films
    Katia Caamaño, Gracia López-Carballo, Raquel Heras-Mozos, Jana Glatz, Pilar Hernández-Muñoz, Rafael Gavara, Mónica Giménez-Marqués
    Dalton Transactions.2023; 52(47): 17993.     CrossRef
  • Ayapana triplinervis: An updated review of traditional uses, phytochemistry, and pharmacological activities
    Moulik Bhattacharyya, Serina Easmin, Krishna Pal, Ranabir Sahu, Gouranga Nandi, Bhargab Jyoti Sahariah, Koushik Nandan Dutta, Manoj Kumar Deka, Partha Pratim Maiti, Tarun Kumar Dua
    Pharmacological Research - Natural Products.2023; 1: 100002.     CrossRef
  • Insecticidal effect of green walnut husks and its active basis digesting targeting to insect phenoloxidase using UPLC-Q-TOF-MS coupled with PLS analysis
    Qiao Gao, Wen-Xian Du, Si-Tong Lv, Yi Li, Shi-An Meng, Guang Chen
    Phytoparasitica.2023; 51(5): 1105.     CrossRef
  • Effect of Rosa damascena Extract on Rat Model Alzheimer’s Disease: A Histopathological, Behavioral, Enzyme Activities, and Oxidative Stress Study
    Leila Beigom Hejaziyan, Seyed Mohammad Hosseini, Ali Taravati, Mohammad Asadi, Mahyar Bakhshi, Pedram Moshaei Nezhad, Mohammad Gol, Mobina Mououdi, Talha Bin Emran
    Evidence-Based Complementary and Alternative Medicine.2023;[Epub]     CrossRef
  • A New Benzaldehyde Derivative Exhibits Antiaflatoxigenic Activity against Aspergillus flavus
    Usuma Jermnak, Paiboon Ngernmeesri, Chompoonek Yurayart, Amnart Poapolathep, Pareeya Udomkusonsri, Saranya Poapolathep, Napasorn Phaochoosak
    Journal of Fungi.2023; 9(11): 1103.     CrossRef
  • Molecular Characterization of Three Chemosensory Proteins from Carposina sasakii
    Liu Liu, Guisheng Qiu, Huaijiang Zhang, Qiang Yue, Wentao Yan, Lina Sun
    Agriculture.2023; 13(11): 2066.     CrossRef
  • The Symbiotic Bacteria—Xenorhabdus nematophila All and Photorhabdus luminescens H06 Strongly Affected the Phenoloxidase Activation of Nipa Palm Hispid, Octodonta nipae (Coleoptera: Chrysomelidae) Larvae
    Nafiu Bala Sanda, Youming Hou
    Pathogens.2023; 12(4): 506.     CrossRef
  • Recent trends in microbial flavour Compounds: A review on Chemistry, synthesis mechanism and their application in food
    Deepak Kumar Verma, Shayma Thyab Gddoa Al-Sahlany, Alaa Kareem Niamah, Mamta Thakur, Nihir Shah, Smita Singh, Deepika Baranwal, Ami R. Patel, Gemilang Lara Utama, Cristobal Noe Aguilar
    Saudi Journal of Biological Sciences.2022; 29(3): 1565.     CrossRef
  • Root-Associated Bacteria Are Biocontrol Agents for Multiple Plant Pests
    Jang Hoon Lee, Anne J. Anderson, Young Cheol Kim
    Microorganisms.2022; 10(5): 1053.     CrossRef
  • Heterorhabditis and Photorhabdus Symbiosis: A Natural Mine of Bioactive Compounds
    Ripu Daman Parihar, Urvashi Dhiman, Anil Bhushan, Prashant Kumar Gupta, Prasoon Gupta
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Natural products from Photorhabdus and Xenorhabdus: mechanisms and impacts
    Harun Cimen, Mustapha Touray, Sebnem Hazal Gulsen, Selcuk Hazir
    Applied Microbiology and Biotechnology.2022; 106(12): 4387.     CrossRef
  • Antibacterial activity and molecular studies of non-symmetric POCOP-Pd(II) pincer complexes derived from 2,4-dihydroxybenzaldehyde (2,4-DHBA)
    Alberto Aragón-Muriel, Bethsy A. Aguilar-Castillo, Ernesto Rufino-Felipe, Hugo Valdés, Lucero González-Sebastián, Rebeca Nayely Osorio-Yáñez, Yamil Liscano, Valente Gómez-Benítez, Dorian Polo-Cerón, David Morales-Morales
    Polyhedron.2022; 227: 116115.     CrossRef
  • Process Development for Benzyl Alcohol Production by Whole-Cell Biocatalysis in Stirred and Packed Bed Reactors
    Carlos J. C. Rodrigues, Carla C. C. R. de Carvalho
    Microorganisms.2022; 10(5): 966.     CrossRef
  • Antibacterial activity of essential oils for combating colistin-resistant bacteria
    Abdullah M. Foda, Mohamed H. Kalaba, Gamal M. El-Sherbiny, Saad A. Moghannem, Esmail M. El-Fakharany
    Expert Review of Anti-infective Therapy.2022; 20(10): 1351.     CrossRef
  • Genome analysis of secondary metabolite‑biosynthetic gene clusters of Photorhabdus akhurstii subsp. akhurstii and its antibacterial activity against antibiotic-resistant bacteria
    Paramaporn Muangpat, Wipanee Meesil, Jatuporn Ngoenkam, Yothin Teethaisong, Rapee Thummeepak, Sutthirat Sitthisak, Sarunporn Tandhavanant, Narisara Chantratita, Helge B. Bode, Apichat Vitta, Aunchalee Thanwisai, Tushar Kanti Dutta
    PLOS ONE.2022; 17(9): e0274956.     CrossRef
  • Solanum linnaeanum Leaves: Chemical Profiling of VOCs and Effects on Seed Germination and Early Growth of Monocots and Dicots
    Stefania Garzoli, Francesca Orlando, Marcello Iriti, Sara Vitalini
    Chemistry & Biodiversity.2022;[Epub]     CrossRef
  • Nematicidal Activity of Organic Food Additives
    Olexandra Boyko, Viktor Brygadyrenko
    Diversity.2022; 14(8): 615.     CrossRef
  • Change of soluble sugars, free and glycosidically bound volatile compounds in postharvest cantaloupe fruit response to cutting procedure and storage
    Dandan Zhou, Qin Zhang, Caie Wu, Tingting Li, Kang Tu
    Scientia Horticulturae.2022; 295: 110863.     CrossRef
  • Bacterial Volatile-Mediated Suppression of Root-Knot Nematode (Meloidogyne incognita)
    Ting Yang, Yi Xin, Tongyao Liu, Zhengfeng Li, Xingzhong Liu, Yunpeng Wu, Mingfeng Wang, Meichun Xiang
    Plant Disease.2022; 106(5): 1358.     CrossRef
  • Evidence for antimicrobial activity in hemp hurds and lignin-containing nanofibrillated cellulose materials
    Preeti Tyagi, Joseph N. Gutierrez, Lucian A. Lucia, Martin A. Hubbe, Lokendra Pal
    Cellulose.2022; 29(9): 5151.     CrossRef
  • The Entomopathogenic Nematodes H. bacteriophora and S. carpocapsae Inhibit the Activation of proPO System of the Nipa Palm Hispid Octodonta nipae (Coleoptera: Chrysomelidae)
    Nafiu Sanda, Bofeng Hou, Youming Hou
    Life.2022; 12(7): 1019.     CrossRef
  • Heavy metal ATPase genes (HMAs) expression induced by endophytic bacteria, “AI001, and AI002” mediate cadmium translocation and phytoremediation
    Ihsan Ullah, Aisha Mateen, Mian Afaq Ahmad, Iqbal Munir, Aqib Iqbal, Khalid M.S. Alghamdi, Habeeb M. Al-Solami, Muhammad Faisal Siddiqui
    Environmental Pollution.2022; 293: 118508.     CrossRef
  • Efficacy of pectin-based caproic acid, caprylic acid, linalool, and cuminaldehyde coatings in reducing Salmonella Heidelberg on chicken eggs
    Abraham Joseph Pellissery, Poonam Gopika Vinayamohan, Jingyi Xue, Xinhao Wang, Leya Susan Viju, Divya Joseph, Yangchao Luo, Ann M. Donoghue, Kumar Venkitanarayanan
    Frontiers in Sustainable Food Systems.2022;[Epub]     CrossRef
  • Efficient enzymatic production of benzaldehyde from l-phenylalanine with a mutant form of 4-hydroxymandelate synthase
    Yasuaki Takakura, Takuto Ono, Keiko Danjo, Hiroyuki Nozaki
    Bioscience, Biotechnology, and Biochemistry.2022; 86(12): 1718.     CrossRef
  • Selective Toxicity of Secondary Metabolites from the Entomopathogenic Bacterium Photorhabdus luminescens sonorensis against Selected Plant Parasitic Nematodes of the Tylenchina Suborder
    Ayako Kusakabe, Chen Wang, Ya-ming Xu, István Molnár, S. Patricia Stock, Jeffrey A. Gralnick
    Microbiology Spectrum.2022;[Epub]     CrossRef
  • Two Philippine Photorhabdus luminescens strains inhibit the in vitro growth of Lasiodiplodia theobromae, Fusarium oxysporum f. sp. lycopersici, and Colletotrichum spp.
    Samantha Izabelle R. Alforja, Paolo Miguel B. Rico, Barbara L. Caoili, Romnick A. Latina
    Egyptian Journal of Biological Pest Control.2021;[Epub]     CrossRef
  • Evaluation of Benzaldehyde as an Antibiotic Modulator and Its Toxic Effect against Drosophila melanogaster
    Luiz Jardelino de Lacerda Neto, Andreza Guedes Barbosa Ramos, Thiago Sampaio de Freitas, Cristina Rodrigues dos Santos Barbosa, Dárcio Luiz de Sousa Júnior, Abolghasem Siyadatpanah, Morteza Nejat, Polrat Wilairatana, Henrique Douglas Melo Coutinho, Franci
    Molecules.2021; 26(18): 5570.     CrossRef
  • Antimicrobial Peptides: Novel Source and Biological Function With a Special Focus on Entomopathogenic Nematode/Bacterium Symbiotic Complex
    Surajit De Mandal, Amrita Kumari Panda, Chandran Murugan, Xiaoxia Xu, Nachimuthu Senthil Kumar, Fengliang Jin
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Analysis of the chemical composition of root essential oil from Indian sarsaparilla (Hemidesmus indicus) and its application as an ecofriendly insecticide and pharmacological agent
    Arunaksharan Narayanankutty, Krishnaprasad Kunnath, Boby Jose, Varsha Ramesh, Rajakrishnan Rajagopal, Ahmed Alfarhan, Abdullah Al-Ansari
    Saudi Journal of Biological Sciences.2021; 28(12): 7248.     CrossRef
  • Endophytic Colonization by the Entomopathogenic Fungus Beauveria Bassiana Affects Plant Volatile Emissions in the Presence or Absence of Chewing and Sap-Sucking Insects
    Natalia González-Mas, Fernando Gutiérrez-Sánchez, Araceli Sánchez-Ortiz, Luca Grandi, Ted C. J. Turlings, José Manuel Muñoz-Redondo, José Manuel Moreno-Rojas, Enrique Quesada-Moraga
    Frontiers in Plant Science.2021;[Epub]     CrossRef
  • Volatile Organic Compounds in the Azteca/Cecropia Ant-Plant Symbiosis and the Role of Black Fungi
    Veronika E. Mayer, Sybren de Hoog, Simona M. Cristescu, Luciano Vera, Francesc X. Prenafeta-Boldú
    Journal of Fungi.2021; 7(10): 836.     CrossRef
  • Volatilome and Essential Oil of Ulomoides dermestoides: A Broad-Spectrum Medical Insect
    Paulina J. Cázares-Samaniego, Claudia G. Castillo, Miguel A. Ramos-López, Marco M. González-Chávez
    Molecules.2021; 26(20): 6311.     CrossRef
  • Toxicity of Five Plant Volatiles to Adult and Egg Stages of Drosophila suzukii Matsumura (Diptera: Drosophilidae), the Spotted-Wing Drosophila
    Ayesha Jabeen, Amr Zaitoon, Loong-Tak Lim, Cynthia Scott-Dupree
    Journal of Agricultural and Food Chemistry.2021; 69(33): 9511.     CrossRef
  • Can Symbiotic Bacteria (Xenorhabdus and Photorhabdus) Be More Efficient than Their Entomopathogenic Nematodes against Pieris rapae and Pentodon algerinus Larvae?
    Hanaa Elbrense, Amr M. A. Elmasry, Mahmoud F. Seleiman, Mohammad S. AL-Harbi, Ahmed M. Abd El-Raheem
    Biology.2021; 10(10): 999.     CrossRef
  • Antifungal activity of different Xenorhabdus and Photorhabdus species against various fungal phytopathogens and identification of the antifungal compounds from X. szentirmaii
    Harun Cimen, Mustapha Touray, Sebnem Hazal Gulsen, Omer Erincik, Sebastian L. Wenski, Helge B. Bode, David Shapiro-Ilan, Selcuk Hazir
    Applied Microbiology and Biotechnology.2021; 105(13): 5517.     CrossRef
  • High-Throughput Volatilome Fingerprint Using PTR–ToF–MS Shows Species-Specific Patterns in Mortierella and Closely Related Genera
    Anusha Telagathoti, Maraike Probst, Iuliia Khomenko, Franco Biasioli, Ursula Peintner
    Journal of Fungi.2021; 7(1): 66.     CrossRef
  • Larvicidal activity of plant extracts by inhibition of detoxification enzymes in Culex pipiens
    Habeeb M. Al-Solami
    Journal of King Saud University - Science.2021; 33(3): 101371.     CrossRef
  • The Synergistic Action of Three Piper Plant Extracts and Biofertilizer for Growth Promotion and Biocontrol of Blast Disease in Red Rice
    Ni Luh Suriani, Dewa Ngurah Suprapta, Agung Wiwiek Indrayani, Susila Herlambang, Ni Made Delly Resiani, Hind A. AL-Shwaiman, Manal M. Al Khulaifi, Abdallah M. Elgorban, Rahul Datta, Sri Gunawan, Ali Tan Kee Zuan
    Sustainability.2021; 13(18): 10412.     CrossRef
  • Fungal benzene carbaldehydes: occurrence, structural diversity, activities and biosynthesis
    Huomiao Ran, Shu-Ming Li
    Natural Product Reports.2021; 38(1): 240.     CrossRef
  • Chemical Composition, Antioxidant, and Antibacterial Activities of Essential Oil of Atriplex semibaccata R.Br. Aerial Parts: First Assessment against Multidrug-Resistant Bacteria
    Hamza Zine, Manar Ibrahimi, Souad Loqman, Eleni G. Papazoglou, Soukaina Ouhaddou, Sara Elgadi, Yedir Ouhdouch, Rachid Hakkou, Mariam El Adnani, Ahmed Ouhammou
    Agronomy.2021; 11(2): 362.     CrossRef
  • Hermetia illucens (L.) (Diptera: Stratiomyidae) Odorant Binding Proteins and Their Interactions with Selected Volatile Organic Compounds: An In Silico Approach
    Carmen Scieuzo, Marisa Nardiello, Donatella Farina, Andrea Scala, Jonathan A. Cammack, Jeffery K. Tomberlin, Heiko Vogel, Rosanna Salvia, Krishna Persaud, Patrizia Falabella
    Insects.2021; 12(9): 814.     CrossRef
  • Antibacterial activity of Xenorhabdus and Photorhabdus isolated from entomopathogenic nematodes against antibiotic-resistant bacteria
    Paramaporn Muangpat, Manawat Suwannaroj, Thatcha Yimthin, Chamaiporn Fukruksa, Sutthirat Sitthisak, Narisara Chantratita, Apichat Vitta, Aunchalee Thanwisai, Filippo Giarratana
    PLOS ONE.2020; 15(6): e0234129.     CrossRef
  • Exploration of Antibacterial Compounds from the Commiphora myrrha Through GC-MS and Their Evaluation Against the Bacteria Isolated from Corvus splendens

    Abasyn Journal Life Sciences.2020; : 31.     CrossRef
  • Isoniazid–phytochemical conjugation: A new approach for potent and less toxic anti‐TB drug development
    Shasank S. Swain, Sudhir K. Paidesetty, Rabindra N. Padhy, Tahziba Hussain
    Chemical Biology & Drug Design.2020; 96(2): 714.     CrossRef
  • Chemical Composition and Antimicrobial Activities of the Essential Oil From the Leaves of Pterocephalus hookeri
    Peng-fei Yang, Hui Lu, Qiong-bo Wang, Zhi-wei Zhao, Qiang Liu, Xu Zhao, Jing Yang, Shen Huang, Zhi-fei Chen, Duo-bin Mao
    Natural Product Communications.2020;[Epub]     CrossRef
  • Quantum chemical insight into molecular structure, spectroscopic (FT‒IR, FT‒Raman, UV-vis, NMR), and molecular docking of 3,5-di-tert-butyl-2-hydroxybenzaldehyde
    S. J. Jenepha Mary, C. James
    Chemical Data Collections.2020; 29: 100530.     CrossRef
  • Metabolic Profiling and Antibacterial Assessment of Calotropis procera extract against Streptococcus group B

    Abasyn Journal Life Sciences.2020; : 24.     CrossRef
  • GC-MS Profiling of Anti-bacterial Metabolic Compounds from the Extract of Azadirachta indica

    Abasyn Journal Life Sciences.2020; : 17.     CrossRef
  • Role of Carbon Monoxide in Host–Gut Microbiome Communication
    Christopher P. Hopper, Ladie Kimberly De La Cruz, Kristin V. Lyles, Lauren K. Wareham, Jack A. Gilbert, Zehava Eichenbaum, Marcin Magierowski, Robert K. Poole, Jakob Wollborn, Binghe Wang
    Chemical Reviews.2020; 120(24): 13273.     CrossRef
  • Activity of papaya seeds (Carica papaya) against Meloidogyne incognita as a soil biofumigant
    Vanessa Alves Gomes, Vicente P. Campos, Julio Carlos Pereira da Silva, Fabíola de Jesus Silva, Marcela de Freitas Silva, Marcio Pozzobon Pedroso
    Journal of Pest Science.2020; 93(2): 783.     CrossRef
  • The impact of certain flavourings and preservatives on the survivability of eggs of Ascaris suum and Trichuris suis
    O. O. Boyko, V. V. Brygadyrenko
    Regulatory Mechanisms in Biosystems.2020; 11(2): 344.     CrossRef
  • The impact of certain flavourings and preservatives on the survivability of eggs of Ascaris suum and Trichuris suis
    O. O. Boyko, V. V. Brygadyrenko
    Regulatory Mechanisms in Biosystems.2020; 11(2): 344.     CrossRef
  • Inhibition of Spodoptera frugiperda phenoloxidase activity by the products of the Xenorhabdus rhabduscin gene cluster
    Maria Eugenia Nuñez-Valdez, Anne Lanois, Sylvie Pagès, Bernard Duvic, Sophie Gaudriault, Erjun Ling
    PLOS ONE.2019; 14(2): e0212809.     CrossRef
  • Streptomyces angustmyceticus NR8-2 as a potential microorganism for the biological control of leaf spots of Brassica rapa subsp. pekinensis caused by Colletotrichum sp. and Curvularia lunata
    Prisana Wonglom, Nakarin Suwannarach, Saisamorn Lumyong, Shin-ichi Ito, Kenji Matsui, Anurag Sunpapao
    Biological Control.2019; 138: 104046.     CrossRef
  • Rapid Characterization and Discovery of Chemical Markers for Discrimination of Xanthii Fructus by Gas Chromatography Coupled to Mass Spectrometry
    Hayoung Kim, Youngae Jung, So Hyeon Jeon, Geum-Sook Hwang, Yun Gyong Ahn
    Molecules.2019; 24(22): 4079.     CrossRef
  • A review on influencing factors on the minimum inhibitory concentration of essential oils
    Elien Van de Vel, Imca Sampers, Katleen Raes
    Critical Reviews in Food Science and Nutrition.2019; 59(3): 357.     CrossRef
  • Traceability of Functional Volatile Compounds Generated on Inoculated Cocoa Fermentation and Its Potential Health Benefits
    Jatziri Mota-Gutierrez, Letricia Barbosa-Pereira, Ilario Ferrocino, Luca Cocolin
    Nutrients.2019; 11(4): 884.     CrossRef
  • The Bacteriological Properties of Bacillus Strain TM-I-3 and Analysis of the Volatile Antifungal Compounds Emitted by this Bacteria
    CHIHIRO OSAKI, KYOSHIRO YAMAGUCHI, SHINJI URAKAWA, YUKIHIKO NAKASHIMA, KAZUTOSHI SUGITA, MASAKI NAGAISHI, SHINJI MITSUIKI, TAKUYA KURAOKA, YUKIKO OGAWA, HIROSHI SATO
    Biocontrol Science.2019; 24(3): 129.     CrossRef
  • Proteomic changes in Arthrobotrys oligospora conidia in response to benzaldehyde-induced fungistatic stress
    Tong Liu, Li-Juan Zou, Dong-Wei Tian, Qi-Yan Can, Ming-Liang Zhu, Ming-He Mo, Ke-Qin Zhang
    Journal of Proteomics.2019; 192: 358.     CrossRef
  • Chemical cues linked to risk: Cues from below‐ground natural enemies enhance plant defences and influence herbivore behaviour and performance
    Anjel M. Helms, Swayamjit Ray, Nina L. Matulis, Margaret C. Kuzemchak, William Grisales, John F. Tooker, Jared G. Ali, Arjen Biere
    Functional Ecology.2019; 33(5): 798.     CrossRef
  • Solid‐state fermented Chinese alcoholic beverage (baijiu) and ethanol resulted in distinct metabolic and microbiome responses
    Cheng Fang, Hai Du, Xiaojiao Zheng, Aihua Zhao, Wei Jia, Yan Xu
    The FASEB Journal.2019; 33(6): 7274.     CrossRef
  • Carlina oxide from Carlina acaulis root essential oil acts as a potent mosquito larvicide
    Giovanni Benelli, Roman Pavela, Riccardo Petrelli, Franks Kamgang Nzekoue, Loredana Cappellacci, Giulio Lupidi, Luana Quassinti, Massimo Bramucci, Stefania Sut, Stefano Dall’Acqua, Angelo Canale, Filippo Maggi
    Industrial Crops and Products.2019; 137: 356.     CrossRef
  • Synthesis and Evaluation of Antioxidant, Antimicrobial and Anticancer Properties of 2-(Prop-2-yn-1-yloxy)benzaldehyde Derivatives
    Metin Konus, Selahattin Aydemir, Can Yilmaz, Arif Kivrak, Aslihan Kurt Kizildogan, Pembegül Uyar Arpacı
    Letters in Organic Chemistry.2019; 16(5): 415.     CrossRef
  • Biocontrol of Phytophthora root and stem rot disease in papaya (Carica papaya) plants by Photorhabdus, the symbiont bacterium of Heterorhabditis amazonensis
    Daniele Palmieri, Edgar Portillo, Yoelvis Sulbarán, Mayamarú Guerra, Ernesto San-Blas
    BioControl.2019; 64(5): 595.     CrossRef
  • Effects of the Botanical Compound p-Anisaldehyde on Horn Fly (Diptera: Muscidae) Repellency, Mortality, and Reproduction
    Allan T Showler, Jessica L Harlien
    Journal of Medical Entomology.2018; 55(1): 183.     CrossRef
  • Bacterial compounds, as biocontrol agent against early blight (Alternaria solani) and tobacco cut worm (Spodoptera lituraFab.) of tomato (Lycopersicon esculentumMill.)
    Kanagaraj Muthu-Pandian Chanthini, Sengottayan Senthil-Nathan, Ramaiah Soranam, Annamalai Thanigaivel, Sengodan Karthi, Chinnadurai Sreenath Kumar, Samuel Jayasurya Kingsley, Ramasamy Kanagaraj Murali-Baskaran
    Archives of Phytopathology and Plant Protection.2018; 51(13-14): 729.     CrossRef
  • Valorisation of olive agro-industrial by-products as a source of bioactive compounds
    Beatriz Gullón, Patricia Gullón, Gemma Eibes, Cristóbal Cara, Antonia De Torres, Juan Carlos López-Linares, Encarnación Ruiz, Eulogio Castro
    Science of The Total Environment.2018; 645: 533.     CrossRef
  • Secondary Metabolites Produced by Heterorhabditis Symbionts and Their Application in Agriculture: What We Know and What to Do Next
    S. PATRICIA STOCK, AYAKO KUSAKABE, ROUSEL A. OROZCO
    Journal of Nematology.2017; 49(4): 373.     CrossRef
  • Antibiotics from Gram-negative bacteria: a comprehensive overview and selected biosynthetic highlights
    J. Masschelein, M. Jenner, G. L. Challis
    Natural Product Reports.2017; 34(7): 712.     CrossRef
  • Changes in antioxidant activities and volatile compounds of mixed berry juice through fermentation by lactic acid bacteria
    Jae-Bum Park, Seung-Hee Lim, Hyun-Su Sim, Joong-Hee Park, Hun-Joo Kwon, Hee Sop Nam, Myoung-Dong Kim, Hyung-Hee Baek, Suk-Jin Ha
    Food Science and Biotechnology.2017; 26(2): 441.     CrossRef
  • Antimicrobial efficacy of Cinnamomum javanicum plant extract against Listeria monocytogenes and its application potential with smoked salmon
    Wenqian Yuan, Hui Wen Lee, Hyun-Gyun Yuk
    International Journal of Food Microbiology.2017; 260: 42.     CrossRef
  • Screening of the Antimicrobial Activity against Drug Resistant Bacteria of Photorhabdus and Xenorhabdus Associated with Entomopathogenic Nematodes from Mae Wong National Park, Thailand
    Paramaporn Muangpat, Temsiri Yooyangket, Chamaiporn Fukruksa, Manawat Suwannaroj, Thatcha Yimthin, Sutthirat Sitthisak, Narisara Chantratita, Apichat Vitta, Nicholas J. Tobias, Helge B. Bode, Aunchalee Thanwisai
    Frontiers in Microbiology.2017;[Epub]     CrossRef
  • Calli Essential Oils Synergize with Lawsone against Multidrug Resistant Pathogens
    Sameh Soliman, Abrar Alsaadi, Eman Youssef, Gregory Khitrov, Ayman Noreddin, Mohamed Husseiny, Ashraf Ibrahim
    Molecules.2017; 22(12): 2223.     CrossRef
  • Metabolites profiling reveals for antimicrobial compositional differences and action mechanism in the toothbrushing stick “miswak” Salvadora persica
    Mohamed A. Farag, Sherifa Fahmy, Mouchira A. Choucry, Mariam O. Wahdan, Mahmoud Fahmi Elsebai
    Journal of Pharmaceutical and Biomedical Analysis.2017; 133: 32.     CrossRef
  • Update: biological and chemical aspects of Nectandra genus (Lauraceae)
    Simone S. Grecco, Harry Lorenzi, Andre G. Tempone, João Henrique G. Lago
    Tetrahedron: Asymmetry.2016; 27(17-18): 793.     CrossRef
  • Stabilization and Antifungal Activity of Isolated Symbiotic Bacteria from Entomopathogenic Nematodes
    Dong-Hee Kang, Hyo-Hyun Kim, Uk-Ho Nam, Hyun-Soo Kim
    KSBB Journal.2015; 30(3): 132.     CrossRef
Journal Article
Chitinase Production by Bacillus thuringiensis and Bacillus licheniformis: Their Potential in Antifungal Biocontrol
Eman Zakaria Gomaa
J. Microbiol. 2012;50(1):103-111.   Published online February 27, 2012
DOI: https://doi.org/10.1007/s12275-012-1343-y
  • 347 View
  • 1 Download
  • 111 Crossref
AbstractAbstract PDF
Thirty bacterial strains were isolated from the rhizosphere of plants collected from Egypt and screened for production of chitinase enzymes. Bacillus thuringiensis NM101-19 and Bacillus licheniformis NM120-17 had the highest chitinolytic activities amongst those investigated. The production of chitinase by B. thuringiensis and B. licheniformis was optimized using colloidal chitin medium amended with 1.5% colloidal chitin, with casein as a nitrogen source, at 30°C after five days of incubation. An enhancement of chitinase production by the two species was observed by addition of sugar substances and dried fungal mats to the colloidal chitin media. The optimal conditions for chitinase activity by B. thuringiensis and B. licheniformis were at 40°C, pH 7.0 and pH 8.0, respectively. Na+, Mg2+, Cu2+, and Ca2+ caused enhancement of enzyme activities whereas they were markedly inhibited by Zn2+, Hg2+, and Ag+. In vitro, B. thuringiensis and B. licheniformis chitinases had potential for cell wall lysis of many phytopathogenic fungi tested. The addition of B. thuringiensis chitinase was more effective than that of B. licheniformis in increasing the germination of soybean seeds infected with various phytopathogenic fungi.

Citations

Citations to this article as recorded by  
  • Antagonism of Bacillus velezensis ZGE166 Against the Pathogenic Fungi Causing Corm Rot Disease in Saffron (Crocus sativus L.)
    Yingqiu Guo, Li Tian, Xinyu Zhu, Shu Liu, Lili Wang, Wankui Li
    Microbial Ecology.2025;[Epub]     CrossRef
  • Chitinase-binding gene BvCHiB enhances resistance of Arabidopsis to verticillium wilt through JA and SA pathways
    Yujing Liu
    Highlights in Science, Engineering and Technology.2025; 129: 213.     CrossRef
  • Effect of Pseudomonas protegens EMM-1 Against Rhizopus oryzae in Interactions with Mexican Autochthonous Red Maize
    Bruce Manuel Morales-Barron, Violeta Larios-Serrato, Yolanda Elizabeth Morales-García, Verónica Quintero-Hernández, Paulina Estrada-de los Santos, Jesús Muñoz-Rojas
    Life.2025; 15(4): 554.     CrossRef
  • Biocontrol Potential of Streptomyces sp. C2-4 against Ceratobasidium cereale Caused Sharp Eyespot in Wheat
    Miju Jo, Sunmin An, Da Som Kim, Won-Jae Chi, Sook-Young Park
    Research in Plant Disease.2025; 31(1): 125.     CrossRef
  • Process optimisation for improved chitinase production from marine isolate Bacillus haynesii and bioethanol production with Saccharomyces cerevisiae
    Vishnupriya Govindaraj, Dinesh Kumar Anandan, Se-Kwon Kim, Ritu Raval, Keyur Raval
    Brazilian Journal of Microbiology.2025; 56(2): 835.     CrossRef
  • The Potential of Beneficial Microbes for Sustainable Alternative Approaches to Control Phytopathogenic Diseases
    Ramadan Bakr, Ali Abdelmoteleb, Vianey Mendez-Trujillo, Daniel Gonzalez-Mendoza, Omar Hewedy
    Microbiology Research.2025; 16(5): 105.     CrossRef
  • Yield enhancement efficacy of Bacillus velezensis CE 100 biofertilizer on Pineapple (Ananas comosus L. Merr.) producion in Prachuap Khiri Khan, Thailand
    Duangkaew, P., Kim, K. Y., Monkhung, S.
    International Journal of Agricultural Technology.2025; 21(4): 1261.     CrossRef
  • Reduced fungal protein acetylation mediates the antimicrobial activity of a rhizosphere bacterium against a phytopathogenic fungus
    Ying-Chao Zhang, Xin Zhan, Jun-Yu Chen, Ding-Tian Yu, Tao Zhang, Huiming Zhang, Cheng-Guo Duan
    Nature Communications.2025;[Epub]     CrossRef
  • The Prospect of Microbial Chitinase as a Bio-Shield for the Biocontrol of Plant Pathogens: A Step towards Eco-Friendly Farming
    Bushrabanu Shaikh, Urvish Chhaya
    Microbiology and Biotechnology Letters.2025; 53(2): 145.     CrossRef
  • Evaluation of Bacillus isolates as a biological control agents against soilborne phytopathogenic fungi
    Derya Maral-Gül, Rengin Eltem
    International Microbiology.2024; 28(S1): 75.     CrossRef
  • Chitinase: a potent biocatalyst and its diverse applications
    Gaytri Mahajan, Vibhuti Sharma, Reena Gupta
    Biocatalysis and Biotransformation.2024; 42(2): 85.     CrossRef
  • Bacillus cereus sensu lato antimicrobial arsenal: An overview
    Louis Morandini, Simon Caulier, Claude Bragard, Jacques Mahillon
    Microbiological Research.2024; 283: 127697.     CrossRef
  • Effective biological control of Lentil (Lens culinaris) Fusarium wilt and plant growth promotion through native Rhizobacteria
    Javeria Ayub, Ayesha Tahir, Umer Iqbal, Huma Ayub, Muhammad Zeeshan Hyder, Amna Kiyani, Fauzia Yusuf Hafeez, Muhammad Kashif Ilyas, Abdul Ghafoor, Tayyaba Yasmin
    Physiological and Molecular Plant Pathology.2024; 129: 102203.     CrossRef
  • Bacillus endophytic strains control Fusarium wilt caused by Fusarium oxysporum f. sp. lycopersici in tomato cv. Perinha
    Guilherme Caldieraro Viana, Leonardo Oliveira Médici, Marcia Soares Vidal, José Ivo Baldani
    Brazilian Journal of Microbiology.2024; 55(4): 4019.     CrossRef
  • Exploring chitin: novel pathways and structures as promising targets for biopesticides
    Malkiet Kaur, Manju Nagpal, Gitika Arora Dhingra, Ankit Rathee
    Zeitschrift für Naturforschung C.2024; 79(5-6): 125.     CrossRef
  • Chitinolytic microorganisms for biological control of plant pathogens: A Comprehensive review and meta-analysis
    Sristi Das, Suvasri Dutta, Saibal Ghosh, Abhishek Mukherjee
    Crop Protection.2024; 185: 106888.     CrossRef
  • Improved Expression of a Thermostable GH18 Bacterial Chitinase in Two Different Escherichia coli Strains and Its Potential Use in Plant Protection and Biocontrol of Phytopathogenic Fungi
    Aymen Ezzine, Safa Ben Hadj Mohamed, Sofiane Bezzine, Yosra Aoudi, Mohamed Rabeh Hajlaoui, Laura Baciou, Issam Smaali
    Molecular Biotechnology.2024; 66(9): 2635.     CrossRef
  • A highly active Chitinase-A of Serratia ficaria isolated from Pieris brassicae (Lepidoptera: Pieridae)
    Merve Almula Bakirdogen, Gozde Busra Eroglu
    Crop Protection.2024; 179: 106623.     CrossRef
  • Bacillus genus industrial applications and innovation: First steps towards a circular bioeconomy
    Leonardo Wedderhoff Herrmann, Luiz Alberto Junior Letti, Rafaela de Oliveira Penha, Vanete Thomaz Soccol, Cristine Rodrigues, Carlos Ricardo Soccol
    Biotechnology Advances.2024; 70: 108300.     CrossRef
  • In Vitro Antagonistic Activity of Plant Growth Promoting Rhizobacteria Against Aggressive Biotypes of the Green Mold
    Baran Mis, Kemal Karaca, Rengin Eltem
    Journal of Basic Microbiology.2024;[Epub]     CrossRef
  • Flue-cured tobacco intercropping with insectary floral plants improves rhizosphere soil microbial communities and chemical properties of flue-cured tobacco
    Jin Zhong, Wenze Pan, Shenglan Jiang, Yanxia Hu, Guangyuan Yang, Ke Zhang, Zhenyuan Xia, Bin Chen
    BMC Microbiology.2024;[Epub]     CrossRef
  • Insights into the whole genome sequence of Bacillus thuringiensis NBAIR BtPl, a strain toxic to the melon fruit fly, Zeugodacus cucurbitae
    Nekkanti Aarthi, Vinod K. Dubey, Arakalagud N. Shylesha, Aditya Kukreti, Jagadeesh Patil, Keerthi M. Chandrashekara, Kandan Aravindaram, Ruqiya Seegenahalli, Nanditha Shivakumar, Manjunatha Channappa
    Current Genetics.2024;[Epub]     CrossRef
  • Marine chitinase AfChi: green defense management against Colletotrichum gloeosporioides and anthracnose
    Rajesh K.M., Keyur Raval, Ritu Raval
    AMB Express.2024;[Epub]     CrossRef
  • Biocontrol of fungal phytopathogens by Bacillus pumilus
    Jakub Dobrzyński, Zuzanna Jakubowska, Iryna Kulkova, Paweł Kowalczyk, Karol Kramkowski
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • PENGARUH pH, SUHU DAN JENIS SUBSTRAT TERHADAP AKTIVITAS KITINASE Bacillus sp. RNT9
    Satrio Adil Pamungkas, Indun Dewi Puspita, Ustadi Ustadi
    Saintek Perikanan : Indonesian Journal of Fisheries Science and Technology.2023; 19(1): 29.     CrossRef
  • The Prospect of Hydrolytic Enzymes from Bacillus Species in the Biological Control of Pests and Diseases in Forest and Fruit Tree Production
    Henry B. Ajuna, Hyo-In Lim, Jae-Hyun Moon, Sang-Jae Won, Vantha Choub, Su-In Choi, Ju-Yeol Yun, Young Sang Ahn
    International Journal of Molecular Sciences.2023; 24(23): 16889.     CrossRef
  • Characterization of chitinolytic bacteria newly isolated from the termite Microcerotermes sp. and their biocontrol potential against plant pathogenic fungi
    Kittipong Chanworawit, Pachara Wangsoonthorn, Pinsurang Deevong
    Bioscience, Biotechnology, and Biochemistry.2023; 87(9): 1077.     CrossRef
  • Enhanced production of N-acetyl-glucosaminidase by marine Aeromonas caviae CHZ306 in bioreactor
    Flávio Augusto Cardozo, Valker Feitosa, Carlos Miguel Nóbrega Mendonça, Francisco Vitor Santos da Silva, Attilio Converti, Ricardo Pinheiro de Souza Oliveira, Adalberto Pessoa
    Brazilian Journal of Microbiology.2023; 54(3): 1533.     CrossRef
  • Gas Chromatography–Mass Spectrometry Profiling of Volatile Metabolites Produced by Some Bacillus spp. and Evaluation of Their Antibacterial and Antibiotic Activities
    Moldir Koilybayeva, Zhanserik Shynykul, Gulbaram Ustenova, Krzysztof Waleron, Joanna Jońca, Kamilya Mustafina, Akerke Amirkhanova, Yekaterina Koloskova, Raushan Bayaliyeva, Tamila Akhayeva, Mereke Alimzhanova, Aknur Turgumbayeva, Gulden Kurmangaliyeva, Ai
    Molecules.2023; 28(22): 7556.     CrossRef
  • Thermostable Chitinase Producing Bacterium from Ijen Hot Spring – Indonesia: Isolation, Identification, and Characterization
    Ruth Chrisnasari, Liony Priscilla Sutanto, Dian Paulina, Alicia Wahjudi, Tjandra Pantjajani, R.H. Setyobudi, A. Yaro, I. Zekker, M. Zahoor, T. Turkadze
    E3S Web of Conferences.2023; 374: 00032.     CrossRef
  • Isolation, biochemical characterization, and genome sequencing of two high‐quality genomes of a novel chitinolytic Jeongeupia species
    Nathanael D. Arnold, Daniel Garbe, Thomas B. Brück
    MicrobiologyOpen.2023;[Epub]     CrossRef
  • Approach for quick exploration of highly effective broad-spectrum biocontrol strains based on PO8 protein inhibition
    Mei Gu, Jiayun Fu, Honglin Yan, Xiaofeng Yue, Shancang Zhao, Qi Zhang, Peiwu Li
    npj Science of Food.2023;[Epub]     CrossRef
  • Antifungal Activity of Partially Purified Bacterial Chitinase Against Alternaria alternata
    Neslihan Dikbaş, Sevda Uçar, Elif Tozlu, Merve Şenol Kotan, Recep Kotan
    Erwerbs-Obstbau.2023; 65(4): 761.     CrossRef
  • Characterization of the chemical fungicides-responsive and bacterial pathogen-preventing Bacillus licheniformis in rice spikelet
    Chengfang Zhan, Mengchen Wu, Hongda Fang, Xiaoyu Liu, Jiuyue Pan, Xiaoyan Fan, Mengcen Wang, Haruna Matsumoto
    Food Quality and Safety.2023;[Epub]     CrossRef
  • Macrolactin A mediated biocontrol of Fusarium oxysporum and Rhizoctonia solani infestation on Amaranthus hypochondriacus by Bacillus subtilis BS-58
    Chitra Pandey, Deepti Prabha, Yogesh Kumar Negi, Dinesh Kumar Maheshwari, Shrivardhan Dheeman, Monika Gupta
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Formation of recombinant bifunctional fusion protein: A newer approach to combine the activities of two enzymes in a single protein
    Patel Nilpa, Kapadia Chintan, R. Z. Sayyed, Hesham El Enshasy, Hala El Adawi, Alaa Alhazmi, Atiah H. Almalki, Shafiul Haque, Rahul Datta
    PLOS ONE.2022; 17(4): e0265969.     CrossRef
  • Efficiency and mechanisms of action of pelletized compost loaded with Bacillus velezensis CE 100 for controlling tomato Fusarium wilt
    Seo Hyun Hwang, Chaw Ei Htwe Maung, Jun Su Noh, Woon Seon Baek, Jeong-Yong Cho, Kil Yong Kim
    Biological Control.2022; 176: 105088.     CrossRef
  • Purification, characterization, and antifungal activity of Bacillus cereus strain NK91 chitinase from rhizospheric soil samples of Himachal Pradesh, India
    Nirja Thakur, Amarjit K Nath, Anjali Chauhan, Rakesh Gupta
    Biotechnology and Applied Biochemistry.2022; 69(5): 1830.     CrossRef
  • Macrolactin a Mediated Biocontrol of Two Important Fungal Pathogens of Amaranthus Hypochondriacus by Bacillus Subtilis BS-58
    Chitra Pandey, Deepti Prabha, Yogesh Kumar Negi, D. K. Maheshwari
    SSRN Electronic Journal.2022;[Epub]     CrossRef
  • Morphological and structural characterization of chitin as a substrate for the screening, production, and molecular characterization of chitinase by Bacillus velezensis
    Digvijay Dahiya, Akhil Pilli, Pratap Raja Reddy Chirra, Vinay Sreeramula, Nitish Venkateswarlu Mogili, Seenivasan Ayothiraman
    Environmental Science and Pollution Research.2022; 29(57): 86550.     CrossRef
  • Recent Advances and Technologies in Chitinase Production Under Solid-State Fermentation
    Mini K. Paul, Umesh B.T, Jyothis Mathew
    Biosciences Biotechnology Research Asia.2022; 19(4): 815.     CrossRef
  • Effect of soil management systems on the rhizosphere bacterial community structure of tobacco: Continuous cropping vs. paddy-upland rotation
    Peng Wang, Shen Yan, Wenshui Zhang, Xiaodan Xie, Mingjie Li, Tianbao Ren, Li Gu, Zhongyi Zhang
    Frontiers in Plant Science.2022;[Epub]     CrossRef
  • Broad-spectrum resistance mechanism of serine protease Sp1 in Bacillus licheniformis W10 via dual comparative transcriptome analysis
    Lina Yang, Chun Yan, Shuai Peng, Lili Chen, Junjie Guo, Yihe Lu, Lianwei Li, Zhaolin Ji
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Isolation of Chitinolytic Bacteria from European Sea Bass Gut Microbiota Fed Diets with Distinct Insect Meals
    Fábio Rangel, Rafaela A. Santos, Marta Monteiro, Ana Sofia Lavrador, Laura Gasco, Francesco Gai, Aires Oliva-Teles, Paula Enes, Cláudia R. Serra
    Biology.2022; 11(7): 964.     CrossRef
  • Current Perspectives on Chitinolytic Enzymes and Their Agro-Industrial Applications
    Vikram Poria, Anuj Rana, Arti Kumari, Jasneet Grewal, Kumar Pranaw, Surender Singh
    Biology.2021; 10(12): 1319.     CrossRef
  • Extracellular Antifungal Activity of Chitinase-Producing Bacteria Isolated From Guano of Insectivorous Bats
    Delfini CD, Villegas LB, Martínez MA, Baigorí MD
    Current Microbiology.2021; 78(7): 2787.     CrossRef
  • Bacilli as sources of agrobiotechnology: recent advances and future directions
    Zerihun T. Dame, Mahfuz Rahman, Tofazzal Islam
    Green Chemistry Letters and Reviews.2021; 14(2): 246.     CrossRef
  • A Novel Antidipteran Bacillus thuringiensis Strain: Unusual Cry Toxin Genes in a Highly Dynamic Plasmid Environment
    Nancy Fayad, Zakaria Kambris, Laure El Chamy, Jacques Mahillon, Mireille Kallassy Awad, Karyn N. Johnson
    Applied and Environmental Microbiology.2021;[Epub]     CrossRef
  • Quantitative single molecule RNA-FISH and RNase-free cell wall digestion in Neurospora crassa
    Bradley M. Bartholomai, Amy S. Gladfelter, Jennifer J. Loros, Jay C. Dunlap
    Fungal Genetics and Biology.2021; 156: 103615.     CrossRef
  • Antifungal Activity of Bacillus velezensis CE 100 against Anthracnose Disease (Colletotrichum gloeosporioides) and Growth Promotion of Walnut (Juglans regia L.) Trees
    Vantha Choub, Henry B. Ajuna, Sang-Jae Won, Jae-Hyun Moon, Su-In Choi, Chaw Ei Htwe Maung, Chul-Woo Kim, Young Sang Ahn
    International Journal of Molecular Sciences.2021; 22(19): 10438.     CrossRef
  • Key parameters optimization of chitosan production from Aspergillus terreus using apple waste extract as sole carbon source
    Alireza Habibi, Salar Karami, Kambiz Varmira, Malihe Hadadi
    Bioprocess and Biosystems Engineering.2021; 44(2): 283.     CrossRef
  • Chitinases production: A robust enzyme and its industrial applications
    Rahul Vikram Singh, Krishika Sambyal, Anjali Negi, Shubham Sonwani, Ritika Mahajan
    Biocatalysis and Biotransformation.2021; 39(3): 161.     CrossRef
  • Microbial chitinases: properties, enhancement and potential applications
    Eman Zakaria Gomaa
    Protoplasma.2021; 258(4): 695.     CrossRef
  • Drought Exposed Burkholderia seminalis JRBHU6 Exhibits Antimicrobial Potential Through Pyrazine-1,4-Dione Derivatives Targeting Multiple Bacterial and Fungal Proteins
    Jay Kishor Prasad, Priyanka Pandey, Richa Anand, Richa Raghuwanshi
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Pectin lyase enhances cotton resistance to Verticillium wilt by inducing cell apoptosis of Verticillium dahliae
    Jing Zhang, Xinru Yu, Chaojun Zhang, Qiong Zhang, Ying Sun, Heqin Zhu, Canming Tang
    Journal of Hazardous Materials.2021; 404: 124029.     CrossRef
  • Bacillus licheniformis PR2 Controls Fungal Diseases and Increases Production of Jujube Fruit under Field Conditions
    Jun-Hyeok Kwon, Sang-Jae Won, Jae-Hyun Moon, Uk Lee, Yun-Serk Park, Chaw Ei Htwe Maung, Henry B. Ajuna, Young Sang Ahn
    Horticulturae.2021; 7(3): 49.     CrossRef
  • Bacillus subtilis and B. licheniformis Isolated from Heterorhabditis indica Infected Apple Root Borer (Dorysthenes huegelii) Suppresses Nematode Production in Galleria mellonella
    Akanksha Upadhyay, Sharad Mohan
    Acta Parasitologica.2021; 66(3): 989.     CrossRef
  • Dissecting the Environmental Consequences of Bacillus thuringiensis Application for Natural Ecosystems
    Maria E. Belousova, Yury V. Malovichko, Anton E. Shikov, Anton A. Nizhnikov, Kirill S. Antonets
    Toxins.2021; 13(5): 355.     CrossRef
  • Current Insights on Vegetative Insecticidal Proteins (Vip) as Next Generation Pest Killers
    Tahira Syed, Muhammad Askari, Zhigang Meng, Yanyan Li, Muhammad Abid, Yunxiao Wei, Sandui Guo, Chengzhen Liang, Rui Zhang
    Toxins.2020; 12(8): 522.     CrossRef
  • Comparative bioefficacy of Bacillus and Pseudomonas chitinase against Helopeltis theivora in tea (Camellia sinensis (L.) O.Kuntze
    M. Suganthi, S. Arvinth, P. Senthilkumar
    Physiology and Molecular Biology of Plants.2020; 26(10): 2053.     CrossRef
  • Curing piglets from diarrhea and preparation of a healthy microbiome with Bacillus treatment for industrial animal breeding
    Shousong Yue, Zhentian Li, Fuli Hu, Jean-François Picimbon
    Scientific Reports.2020;[Epub]     CrossRef
  • Bacillus Thuringiensis – Nowy PotencjaŁ Aplikacyjny
    Aleksandra Gęsicka, Agata Henschke, Zuzanna Barańska, Agnieszka Wolna-Maruwka
    Postępy Mikrobiologii - Advancements of Microbiology.2020; 59(4): 357.     CrossRef
  • Bioconversion of Colloidal Chitin Using Novel Chitinase from Glutamicibacter uratoxydans Exhibiting Anti-fungal Potential by Hydrolyzing Chitin Within Fungal Cell Wall
    Tayyaba Asif, Urooj Javed, Syeda Bushra Zafar, Asma Ansari, Shah Ali Ul Qader, Afsheen Aman
    Waste and Biomass Valorization.2020; 11(8): 4129.     CrossRef
  • Biocontrol potential of chitinases produced by newly isolated Chitinophaga sp. S167
    Sonia Sharma, Shiv Kumar, Anjali Khajuria, Puja Ohri, Rajinder Kaur, Ramandeep Kaur
    World Journal of Microbiology and Biotechnology.2020;[Epub]     CrossRef
  • Screening of an Alkaline CMCase-Producing Strain and the Optimization of its Fermentation Condition
    Junmei Zhou, Lianghong Yin, Chenbin Wu, Sijia Wu, Jidong Lu, Hailing Fang, Yongchang Qian
    Current Pharmaceutical Biotechnology.2020; 21(13): 1304.     CrossRef
  • Screening of Bacillus thuringiensis strains to identify new potential biocontrol agents against Sclerotinia sclerotiorum and Plutella xylostella in Brassica campestris L.
    Meiling Wang, Lili Geng, Xiaoxiao Sun, Changlong Shu, Fuping Song, Jie Zhang
    Biological Control.2020; 145: 104262.     CrossRef
  • Chitinases of Bacillus thuringiensis: Phylogeny, Modular Structure, and Applied Potentials
    Sheila A. Martínez-Zavala, Uriel E. Barboza-Pérez, Gustavo Hernández-Guzmán, Dennis K. Bideshi, José E. Barboza-Corona
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Isolation and Identification of Plant Growth-Promoting Bacteria Highly Effective in Suppressing Root Rot in Fava Beans
    Mona M. G. Saad, Mahrous Kandil, Youssef M. M. Mohammed
    Current Microbiology.2020; 77(9): 2155.     CrossRef
  • Accelerating the Morphogenetic Cycle of the Viral Vector Aedes aegypti Larvae for Faster Larvicidal Bioassays
    José Domingos Fontana, Rafael Lopes Ferreira, Tatiana Zuccolotto, Cibelle de Borba Dallagassa, Leonardo Pellizzari Wielewski, Barbara Maria Santano Chalcoski, Mario Antonio Navarro da Silva, Vinicius Sobrinho Richardi, Jonas Golart, Cynara de Melo Rodoval
    BioMed Research International.2020;[Epub]     CrossRef
  • Isolation of a novel rhizobacteria having multiple plant growth promoting traits and antifungal activity against certain phytopathogens
    Madhurankhi Goswami, Suresh Deka
    Microbiological Research.2020; 240: 126516.     CrossRef
  • Long-term continuously monocropped peanut significantly changed the abundance and composition of soil bacterial communities
    Mingna Chen, Hu Liu, Shanlin Yu, Mian Wang, Lijuan Pan, Na Chen, Tong Wang, Xiaoyuan Chi, Binghai Du
    PeerJ.2020; 8: e9024.     CrossRef
  • Lipopeptide mediated biocontrol activity of endophytic Bacillus subtilis against fungal phytopathogens
    Dibya Jyoti Hazarika, Gunajit Goswami, Trishnamoni Gautom, Assma Parveen, Pompi Das, Madhumita Barooah, Robin Chandra Boro
    BMC Microbiology.2019;[Epub]     CrossRef
  • Microbial metabolomics: essential definitions and the importance of cultivation conditions for utilizing Bacillus species as bionematicides
    I. Horak, G. Engelbrecht, P.J. Jansen Rensburg, S. Claassens
    Journal of Applied Microbiology.2019; 127(2): 326.     CrossRef
  • Chitinases As The Key To The Interaction Between Plants And Microorganisms
    Anna Kisiel, Katarzyna Jęckowska
    Postępy Mikrobiologii - Advancements of Microbiology.2019; 58(3): 317.     CrossRef
  • Biochemical characterization of chitinase A from Bacillus licheniformis DSM8785 expressed in Pichia pastoris KM71H
    Gheorghita Menghiu, Vasile Ostafe, Radivoje Prodanovic, Rainer Fischer, Raluca Ostafe
    Protein Expression and Purification.2019; 154: 25.     CrossRef
  • Overview of the Antimicrobial Compounds Produced by Members of the Bacillus subtilis Group
    Simon Caulier, Catherine Nannan, Annika Gillis, Florent Licciardi, Claude Bragard, Jacques Mahillon
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Repertoire of the Bacillus thuringiensis Virulence Factors Unrelated to Major Classes of Protein Toxins and Its Role in Specificity of Host-Pathogen Interactions
    Yury V. Malovichko, Anton A. Nizhnikov, Kirill S. Antonets
    Toxins.2019; 11(6): 347.     CrossRef
  • Unraveling the Optimal Culture Condition for the Antifungal Activity and IAA Production of Phylloplane Serratia plymuthica
    Siti Nur Aisyah, Jefri Maldoni, Irma Sulastri, Weni Suryati, Yuli Marlisa, Lissa Herliana, Lily Syukriani, Renfiyeni Renfiyeni, Jamsari Jamsari
    Plant Pathology Journal.2019; 18(1): 31.     CrossRef
  • Inhibitory effect and possible mechanism of a Pseudomonas strain QBA5 against gray mold on tomato leaves and fruits caused by Botrytis cinerea
    Pan Gao, Jiaxing Qin, Delong Li, Shanyue Zhou, Ya-Wen He
    PLOS ONE.2018; 13(1): e0190932.     CrossRef
  • Chitinases—Potential Candidates for Enhanced Plant Resistance towards Fungal Pathogens
    Manish Kumar, Amandeep Brar, Monika Yadav, Aakash Chawade, V. Vivekanand, Nidhi Pareek
    Agriculture.2018; 8(7): 88.     CrossRef
  • Improved antifungal activity of barley derived chitinase I gene that overexpress a 32 kDa recombinant chitinase in Escherichia coli host
    Nida Toufiq, Bushra Tabassum, Muhammad Umar Bhatti, Anwar Khan, Muhammad Tariq, Naila Shahid, Idrees Ahmad Nasir, Tayyab Husnain
    Brazilian Journal of Microbiology.2018; 49(2): 414.     CrossRef
  • Isolation and Evaluation of New Antagonist Bacillus Strains for the Control of Pathogenic and Mycotoxigenic Fungi of Fig Orchards
    Özlem Öztopuz, Gülseren Pekin, Ro Dong Park, Rengin Eltem
    Applied Biochemistry and Biotechnology.2018; 186(3): 692.     CrossRef
  • Microbial and viral chitinases: Attractive biopesticides for integrated pest management
    Francesca Berini, Chen Katz, Nady Gruzdev, Morena Casartelli, Gianluca Tettamanti, Flavia Marinelli
    Biotechnology Advances.2018; 36(3): 818.     CrossRef
  • Improvement of Chitinase Production by Bacillus thuringiensis NM101-19 for Antifungal Biocontrol through Physical Mutation
    E. Z. Gomaa, O. M. El-Mahdy
    Microbiology.2018; 87(4): 472.     CrossRef
  • Bacterial chitinases and their application in biotechnology
    Anna Kisiel, Ewa Kępczyńska
    Postępy Mikrobiologii - Advancements of Microbiology.2017; 56(3): 306.     CrossRef
  • Combating Fusarium Infection Using Bacillus-Based Antimicrobials
    Noor Khan, Maskit Maymon, Ann Hirsch
    Microorganisms.2017; 5(4): 75.     CrossRef
  • Screening and Characterisation of Chitinolytic Microorganisms with Potential to Control White Root Disease of Hevea brasiliensis
    Nor Afiqah Maiden, Aizat Shamin Noran, Mohd Adi Faiz Ahmad Fauzi, Safiah Atan
    Journal of Rubber Research.2017; 20(3): 182.     CrossRef
  • Antifungal Screening of Bioprotective Isolates against Botrytis cinerea, Fusarium pallidoroseum and Fusarium moniliforme
    Antoinette De Senna, Amanda Lathrop
    Fermentation.2017; 3(4): 53.     CrossRef
  • Simultaneous fermentative chitinase and β-1,3 glucanase production from Streptomyces philanthi RM-1-1-38 and their antifungal activity against rice sheath blight disease
    Sawai Boukaew, Wanida Petlamul, Wasana Suyotha, Poonsuk Prasertsan
    BioTechnologia.2017; 97(4): 271.     CrossRef
  • Bacillus thuringiensis: a successful insecticide with new environmental features and tidings
    Gholamreza Salehi Jouzani, Elena Valijanian, Reza Sharafi
    Applied Microbiology and Biotechnology.2017; 101(7): 2691.     CrossRef
  • Enhancement of Exochitinase Production by Bacillus licheniformis AT6 Strain and Improvement of N-Acetylglucosamine Production
    Mohamed Amine Aounallah, Imen Ben Slimene-Debez, Kais Djebali, Dorra Gharbi, Majdi Hammami, Sana Azaiez, Ferid Limam, Olfa Tabbene
    Applied Biochemistry and Biotechnology.2017; 181(2): 650.     CrossRef
  • Chitinase from Pseudomonas fluorescens and its insecticidal activity against Helopeltis theivora
    M. Suganthi, P. Senthilkumar, S. Arvinth, K. N. Chandrashekara
    The Journal of General and Applied Microbiology.2017; 63(4): 222.     CrossRef
  • Silver nanoparticles as an antimicrobial agent: A case study on Staphylococcus aureus and Escherichia coli as models for Gram-positive and Gram-negative bacteria
    Eman Zakaria Gomaa
    The Journal of General and Applied Microbiology.2017; 63(1): 36.     CrossRef
  • Optimised production of chitinase from a novel mangrove isolate, Bacillus pumilus MCB-7 using response surface methodology
    K.S. Rishad, Sharrel Rebello, Vinod Kumar Nathan, S. Shabanamol, M.S. Jisha
    Biocatalysis and Agricultural Biotechnology.2016; 5: 143.     CrossRef
  • A new chitinase-D from a plant growth promoting Serratia marcescens GPS5 for enzymatic conversion of chitin
    Papa Rao Vaikuntapu, Samudrala Rambabu, Jogi Madhuprakash, Appa Rao Podile
    Bioresource Technology.2016; 220: 200.     CrossRef
  • Bacillus thuringiensis C25 which is rich in cell wall degrading enzymes efficiently controls lettuce drop caused by Sclerotinia minor
    Anupama Shrestha, Razia Sultana, Jong-Chan Chae, Kangmin Kim, Kui-Jae Lee
    European Journal of Plant Pathology.2015; 142(3): 577.     CrossRef
  • Isolation of a Chitinolytic Bacillus licheniformis S213 Strain Exerting a Biological Control Against Phoma medicaginis Infection
    Imen Ben Slimene, Olfa Tabbene, Dorra Gharbi, Bacem Mnasri, Jean Marie Schmitter, Maria-Camino Urdaci, Ferid Limam
    Applied Biochemistry and Biotechnology.2015; 175(7): 3494.     CrossRef
  • Characterization of regulatory regions involved in the inducible expression of chiB in Bacillus thuringiensis
    Chi-Chu Xie, Jin Shi, Hai-Yun Jia, Peng-Fei Li, Yang Luo, Jun Cai, Yue-Hua Chen
    Archives of Microbiology.2015; 197(1): 53.     CrossRef
  • YvoA and CcpA Repress the Expression of chiB in Bacillus thuringiensis
    Kun Jiang, Li-na Li, Jin-hua Pan, Ting-ting Wang, Yue-hua Chen, Jun Cai, S.-J. Liu
    Applied and Environmental Microbiology.2015; 81(19): 6548.     CrossRef
  • Ecology of Bacillaceae
    Ines Mandic-Mulec, Polonca Stefanic, Jan Dirk van Elsas, Patrick Eichenberger, Adam Driks
    Microbiology Spectrum.2015;[Epub]     CrossRef
  • Chitinase biotechnology: Production, purification, and application
    Yuriy Mihaylov Stoykov, Atanas Ivanov Pavlov, Albert Ivanov Krastanov
    Engineering in Life Sciences.2015; 15(1): 30.     CrossRef
  • Efficient biosynthesis of a chitinase from Halobacterium salinarum expressed in Escherichia coli
    Fatima Moscoso, Myriam Sieira, Alberto Domínguez, Francisco J. Deive, Maria A. Longo, Maria A. Sanromán
    Journal of Chemical Technology & Biotechnology.2014; 89(11): 1653.     CrossRef
  • Potential use and mode of action of the new strainBacillus thuringiensisUM96 for the biological control of the grey mould phytopathogenBotrytis cinerea
    Sofía Martínez-Absalón, Daniel Rojas-Solís, Rocío Hernández-León, Cristina Prieto-Barajas, Ma. del Carmen Orozco-Mosqueda, Juan José Peña-Cabriales, Shohei Sakuda, Eduardo Valencia-Cantero, Gustavo Santoyo
    Biocontrol Science and Technology.2014; 24(12): 1349.     CrossRef
  • Isolation and characterization of an antifungal protein from Bacillus licheniformis HS10
    Zhixin Wang, Yunpeng Wang, Li Zheng, Xiaona Yang, Hongxia Liu, Jianhua Guo
    Biochemical and Biophysical Research Communications.2014; 454(1): 48.     CrossRef
  • Dual silencing of long and short Amblyomma americanum acidic chitinase forms weakens the tick cement cone stability
    Tae K. Kim, Jenny Curran, Albert Mulenga
    Journal of Experimental Biology.2014;[Epub]     CrossRef
  • Partial Purification of Bacterial Chitinase as Biocontrol of Leaf Blight Disease on Oil Palm
    Muhammad Asril, Nisa Rachmania Mubarik, Aris Tri Wahyudi
    Research Journal of Microbiology.2014; 9(6): 265.     CrossRef
  • Characterization and evaluation of Staphylococcus sp. strain LZ16 for the biological control of rice blast caused by Magnaporthe oryzae
    Qin Yu, Zhu Liu, Derun Lin, Wei Zhang, Qun Sun, Jianqing Zhu, Min Lin
    Biological Control.2013; 65(3): 338.     CrossRef
  • Development of an Industrial Microbial System for Chitinolytic Enzymes Production
    F. Moscoso, L. Ferreira, M.A. Fernández de Dios, F.J. Deive, M.A. Longo, M.A. Sanromán
    Industrial & Engineering Chemistry Research.2013; 52(30): 10046.     CrossRef
  • Bacillus thuringiensiscolonises plant roots in a phylogeny-dependent manner
    J. Cristian Vidal-Quist, Hilary J. Rogers, Eshwar Mahenthiralingam, Colin Berry
    FEMS Microbiology Ecology.2013; 86(3): 474.     CrossRef
  • Comparative Genome Analysis of Enterobacter cloacae
    Wing-Yee Liu, Chi-Fat Wong, Karl Ming-Kar Chung, Jing-Wei Jiang, Frederick Chi-Ching Leung, Jingfa Xiao
    PLoS ONE.2013; 8(9): e74487.     CrossRef
  • Antifungal activity of the lipopeptides produced by Bacillus amyloliquefaciens anti-CA against Candida albicans isolated from clinic
    Bo Song, Yan-Jun Rong, Ming-Xin Zhao, Zhen-Ming Chi
    Applied Microbiology and Biotechnology.2013; 97(16): 7141.     CrossRef
Reviews
The Use of the Rare UUA Codon to Define "Expression Space" for Genes Involved in Secondary Metabolism, Development and Environmental Adaptation in Streptomyces
Keith F. Chater , Govind Chandra
J. Microbiol. 2008;46(1):1-11.
DOI: https://doi.org/10.1007/s12275-007-0233-1
  • 360 View
  • 1 Download
  • 110 Crossref
AbstractAbstract PDF
In Streptomyces coelicolor, bldA encodes the only tRNA for a rare leucine codon, UUA. This tRNA is unnecessary for growth, but is required for some aspects of secondary metabolism and morphological development, as revealed by the phenotypes of bldA mutants in diverse streptomycetes. This article is a comprehensive review of out understanding of this unusual situation. Based on information from four sequenced genomes it now appears that, typically, about 2~3% of genes in any one streptomycete contain a TTA codon, most having been acquired through species-specific horizontal gene transfer. Among the few widely conserved TTA-containing genes, mutations in just one, the pleiotropic regulatory gene adpA, give an obvious phenotype: such mutants are defective in aerial growth and sporulation, but vary in the extent of their impairment in secondary metabolism in different streptomycetes. The TTA codon in adpA is largely responsible for the morphological phenotype of a bldA mutant of S. coelicolor. AdpA-dependent targets include several genes involved in the integrated action of extracellular proteases that, at least in some species, are involved in the conversion of primary biomass into spores. The effects of bldA mutations on secondary metabolism are mostly attributable to the presence of TTA codons in pathway-specific genes, particularly in transcriptional activator genes. This is not confined to S. coelicolor-it is true for about half of all known antibiotic biosynthetic gene sets from streptomycetes. Combined microarray and proteomic analysis of liquid (and therefore non-sporulating) S. coelicolor bldA mutant cultures revealed effects of the mutation during rapid growth, during transition phase, and in stationary phase. Some of these effects may be secondary consequences of changes in the pattern of ppGpp accumulation. It is argued that the preferential accumulation of the bldA tRNA under conditions in which growth is significantly constrained has evolved to favour the expression of genes that confer adaptive benefits in intermittently encountered sub-optimal environments. The evolution of this system may have been a secondary consequence of the selective pressure exerted by bacteriophage attack. Some biotechnological implications of bldA phenomenology are considered.

Citations

Citations to this article as recorded by  
  • Regulatory orchestration of FK506 biosynthesis in Streptomyces tsukubaensis NRRL 18488 revealed through systematic analysis
    Namil Lee, Woori Kim, Ji Hun Kim, Yongjae Lee, Soonkyu Hwang, Gahyeon Kim, Hyeseong Kim, Qingyun Dan, Matthias Schmidt, Yeo Joon Yoon, Suhyung Cho, Bernhard Palsson, Jay D. Keasling, Byung-Kwan Cho
    iScience.2025; 28(6): 112698.     CrossRef
  • Research progress on AdpA: a pleiotropic regulator for <?A3B2 pi6?><italic>Streptomyces</italic> antibiotic synthesis
    QingQing TIAN, JiaHan GANG, LiuXi WANG, ChunMei DU
    SCIENTIA SINICA Vitae.2025;[Epub]     CrossRef
  • CRISPR-aided genome engineering for secondary metabolite biosynthesis in Streptomyces
    Yongjae Lee, Soonkyu Hwang, Woori Kim, Ji Hun Kim, Bernhard O Palsson, Byung-Kwan Cho
    Journal of Industrial Microbiology and Biotechnology.2024;[Epub]     CrossRef
  • A new peucemycin derivative and impacts of peuR and bldA on peucemycin biosynthesis in Streptomyces peucetius
    Rubin Thapa Magar, Van Thuy Thi Pham, Purna Bahadur Poudel, Adzemye Fovennso Bridget, Jae Kyung Sohng
    Applied Microbiology and Biotechnology.2024;[Epub]     CrossRef
  • Regulation of virulence mechanisms in plant-pathogenic Streptomyces
    Corrie V. Vincent, Dawn R.D. Bignell
    Canadian Journal of Microbiology.2024; 70(6): 199.     CrossRef
  • Unraveling the Biosynthetic Logic Behind the Production of Ramoplanin and Related Lipodepsipeptide Antibiotics
    Oleksandr Yushchuk, Kseniia Zhukrovska, Elisa Binda, Flavia Marinelli
    Fermentation.2024; 10(11): 544.     CrossRef
  • Promoter engineering of natural product biosynthetic gene clusters in actinomycetes: concepts and applications
    Chang-Hun Ji, Hyun-Woo Je, Hiyoung Kim, Hahk-Soo Kang
    Natural Product Reports.2024; 41(4): 672.     CrossRef
  • Analysis of the cryptic biosynthetic gene cluster encoding the RiPP curacozole reveals a phenylalanine-specific peptide hydroxylase
    Samantha Hollands, Julia Tasch, David J. Simon, Dimah Wassouf, Isobel Barber, Arne Gessner, Andreas Bechthold, David L. Zechel
    Chemical Science.2024; 15(47): 19858.     CrossRef
  • Building a highly efficient Streptomyces super-chassis for secondary metabolite production by reprogramming naturally-evolved multifaceted shifts
    Shiwen Qiu, Bowen Yang, Zilong Li, Shanshan Li, Hao Yan, Zhenguo Xin, Jingfang Liu, Xuejin Zhao, Lixin Zhang, Wensheng Xiang, Weishan Wang
    Metabolic Engineering.2024; 81: 210.     CrossRef
  • A panoramic view of the genomic landscape of the genus Streptomyces
    Marios Nikolaidis, Andrew Hesketh, Nikoletta Frangou, Dimitris Mossialos, Yves Van de Peer, Stephen G. Oliver, Grigorios D. Amoutzias
    Microbial Genomics .2023;[Epub]     CrossRef
  • Deciphering host–pathogen interaction during Streptomyces spp. infestation of potato
    Ihtisham Ul Haq, Zahid Mukhtar, Muhammad Anwar-ul-Haq, Sana Liaqat
    Archives of Microbiology.2023;[Epub]     CrossRef
  • Comparative genomics of the niche-specific plant pathogen Streptomyces ipomoeae reveal novel genome content and organization
    Natasha R. Soares, José C. Huguet-Tapia, Dongli Guan, Christopher A. Clark, Kuei-Ting Yang, Olivia R. Kluchka, Raju S. Thombal, Rendy Kartika, Jonathan H. Badger, Gregg S. Pettis, Isaac Cann
    Applied and Environmental Microbiology.2023;[Epub]     CrossRef
  • Global Effects of the Developmental Regulator BldB in Streptomyces venezuelae
    Marieta M. Avramova, Clare E. M. Stevenson, Govind Chandra, Neil A. Holmes, Matthew J. Bush, Kim C. Findlay, Mark J. Buttner, George O'Toole
    Journal of Bacteriology.2023;[Epub]     CrossRef
  • Streptomyces rare codon UUA: from features associated with 2 adpA related locations to candidate phage regulatory translational bypassing
    Ivan V. Antonov, Sinéad O’Loughlin, Alessandro N. Gorohovski, Patrick B.F. O’Connor, Pavel V. Baranov, John F. Atkins
    RNA Biology.2023; 20(1): 926.     CrossRef
  • Multi-omic characterisation ofStreptomyces hygroscopicusNRRL 30439: detailed assessment of its secondary metabolic potential
    Craig P. Barry, Rosemary Gillane, Gert H. Talbo, Manual Plan, Robin Palfreyman, Andrea K Haber-Stuk, John Power, Lars K Nielsen, Esteban Marcellin
    Molecular Omics.2022; 18(3): 226.     CrossRef
  • System-Wide Analysis of the GATC-Binding Nucleoid-Associated Protein Gbn and Its Impact onStreptomycesDevelopment
    Chao Du, Joost Willemse, Amanda M. Erkelens, Victor J. Carrion, Remus T. Dame, Gilles P. van Wezel, Jeroen Raes
    mSystems.2022;[Epub]     CrossRef
  • AdpA, a developmental regulator, promotes ε-poly-l-lysine biosynthesis in Streptomyces albulus
    Rui Huang, Honglu Liu, Wanwan Zhao, Siqi Wang, Shufang Wang, Jun Cai, Chao Yang
    Microbial Cell Factories.2022;[Epub]     CrossRef
  • WITHDRAWN: Interplay between non-coding RNA transcription, stringent phenotype and antibiotic production in Streptomyces
    Eva Pinatel, Matteo Calcagnile, Adelfia Talà, Fabrizio Damiano, Luisa Siculella, Clelia Peano, Giuseppe Egidio De Benedetto, Antonio Pennetta, Gianluca De Bellis, Pietro Alifano
    Journal of Biotechnology.2022;[Epub]     CrossRef
  • A new bacterial tRNA enhances antibiotic production in Streptomyces by circumventing inefficient wobble base-pairing
    Ximing Chen, Shuyan Li, Binglin Zhang, Haili Sun, Jinxiu Wang, Wei Zhang, Wenbo Meng, Tuo Chen, Paul Dyson, Guangxiu Liu
    Nucleic Acids Research.2022; 50(12): 7084.     CrossRef
  • Reprogramming the Biosynthesis of Precursor Peptide to Create a Selenazole-Containing Nosiheptide Analogue
    Yingzi Tan, Miao Wang, Yijun Chen
    ACS Synthetic Biology.2022; 11(1): 85.     CrossRef
  • Genetic approaches to improve clorobiocin production in Streptomyces roseochromogenes NRRL 3504
    Sofia Melnyk, Anastasia Stepanyshyn, Oleksandr Yushchuk, Michael Mandler, Iryna Ostash, Oksana Koshla, Victor Fedorenko, Daniel Kahne, Bohdan Ostash
    Applied Microbiology and Biotechnology.2022; 106(4): 1543.     CrossRef
  • Biological Functions and Applications of Virus-Related Bacterial Nanoparticles: A Review
    Toshiki Nagakubo
    International Journal of Molecular Sciences.2022; 23(5): 2595.     CrossRef
  • Cryptic specialized metabolites drive Streptomyces exploration and provide a competitive advantage during growth with other microbes
    Evan M. F. Shepherdson, Marie A. Elliot
    Proceedings of the National Academy of Sciences.2022;[Epub]     CrossRef
  • Engineering Bafilomycin High-Producers by Manipulating Regulatory and Biosynthetic Genes in the Marine Bacterium Streptomyces lohii
    Zhong Li, Shuai Li, Lei Du, Xingwang Zhang, Yuanyuan Jiang, Wenhua Liu, Wei Zhang, Shengying Li
    Marine Drugs.2021; 19(1): 29.     CrossRef
  • Systems and synthetic biology to elucidate secondary metabolite biosynthetic gene clusters encoded inStreptomycesgenomes
    Namil Lee, Soonkyu Hwang, Woori Kim, Yongjae Lee, Ji Hun Kim, Suhyung Cho, Hyun Uk Kim, Yeo Joon Yoon, Min-Kyu Oh, Bernhard O. Palsson, Byung-Kwan Cho
    Natural Product Reports.2021; 38(7): 1330.     CrossRef
  • Interplay between Non-Coding RNA Transcription, Stringent/Relaxed Phenotype and Antibiotic Production in Streptomyces ambofaciens
    Eva Pinatel, Matteo Calcagnile, Adelfia Talà, Fabrizio Damiano, Luisa Siculella, Clelia Peano, Giuseppe Egidio De Benedetto, Antonio Pennetta, Gianluca De Bellis, Pietro Alifano
    Antibiotics.2021; 10(8): 947.     CrossRef
  • Transcriptional Regulation of Congocidine (Netropsin) Biosynthesis and Resistance
    Audrey Vingadassalon, Florence Lorieux, Maud Juguet, Alba Noël, Luisa D. F. Santos, Laura Marin Fernandez, Jean-Luc Pernodet, Stéphanie Bury-Moné, Sylvie Lautru, Maia Kivisaar
    Applied and Environmental Microbiology.2021;[Epub]     CrossRef
  • AdpA Positively Regulates Morphological Differentiation and Chloramphenicol Biosynthesis in Streptomyces venezuelae
    Małgorzata Płachetka, Michał Krawiec, Jolanta Zakrzewska-Czerwińska, Marcin Wolański, Jeffrey A. Gralnick
    Microbiology Spectrum.2021;[Epub]     CrossRef
  • The Use of the Rare TTA Codon in Streptomyces Genes: Significance of the Codon Context?
    Serhii Silov, Nestor Zaburannyi, Maria Anisimova, Bohdan Ostash
    Indian Journal of Microbiology.2021; 61(1): 24.     CrossRef
  • Activation of cryptic milbemycin A4 production in Streptomyces sp. BB47 by the introduction of a functional bldA gene
    Nana Matsui, Shizuka Kawakami, Dai Hamamoto, Sayuri Nohara, Reina Sunada, Watanalai Panbangred, Yasuhiro Igarashi, Takuya Nihira, Shigeru Kitani
    The Journal of General and Applied Microbiology.2021; 67(6): 240.     CrossRef
  • The Phosin PptA Plays a Negative Role in the Regulation of Antibiotic Production in Streptomyces lividans
    Noriyasu Shikura, Emmanuelle Darbon, Catherine Esnault, Ariane Deniset-Besseau, Delin Xu, Clara Lejeune, Eric Jacquet, Naima Nhiri, Laila Sago, David Cornu, Sebastiaan Werten, Cécile Martel, Marie-Joelle Virolle
    Antibiotics.2021; 10(3): 325.     CrossRef
  • The Streptomyces filipinensis Gamma-Butyrolactone System Reveals Novel Clues for Understanding the Control of Secondary Metabolism
    Eva G. Barreales, Tamara D. Payero, Ester Jambrina, Jesús F. Aparicio, Rebecca E. Parales
    Applied and Environmental Microbiology.2020;[Epub]     CrossRef
  • Phenazine-1-carboxylic acid-producing Pseudomonas synxantha LBUM223 alters the transcriptome of Streptomyces scabies, the causal agent of potato common scab
    Tanya Arseneault, Roxane Roquigny, Amy Novinscak, Claudia Goyer, Martin Filion
    Physiological and Molecular Plant Pathology.2020; 110: 101480.     CrossRef
  • The Identification and Conservation of Tunicaminyluracil-Related Biosynthetic Gene Clusters in Several Rathayibacter Species Collected From Australia, Africa, Eurasia, and North America
    Matthew A. Tancos, Aaron J. Sechler, Edward W. Davis, Jeff H. Chang, Brenda K. Schroeder, Timothy D. Murray, Elizabeth E. Rogers
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Gene miaA for post‐transcriptional modification of tRNAXXA is important for morphological and metabolic differentiation in Streptomyces
    Oksana Koshla, Oleksandr Yushchuk, Iryna Ostash, Yuriy Dacyuk, Maksym Myronovskyi, Gunilla Jäger, Roderich D. Süssmuth, Andriy Luzhetskyy, Anders Byström, Leif A. Kirsebom, Bohdan Ostash
    Molecular Microbiology.2019; 112(1): 249.     CrossRef
  • Gene ssfg_01967 (miaB) for tRNA modification influences morphogenesis and moenomycin biosynthesis in Streptomyces ghanaensis ATCC14672
    Yuliia Sehin, Oksana Koshla, Yuriy Dacyuk, Ruoxia Zhao, Robert Ross, Maksym Myronovskyi, Patrick A. Limbach, Andriy Luzhetskyy, Suzanne Walker, Victor Fedorenko, Bohdan Ostash
    Microbiology.2019; 165(2): 233.     CrossRef
  • LeuRS can leucylate type I and type II tRNALeus in Streptomyces coelicolor
    Jia-Yi Fan, Qian Huang, Quan-Quan Ji, En-Duo Wang
    Nucleic Acids Research.2019; 47(12): 6369.     CrossRef
  • Genome mining reveals the origin of a bald phenotype and a cryptic nucleocidin gene cluster in Streptomyces asterosporus DSM 41452
    Songya Zhang, Dennis Klementz, Jing Zhu, Roman Makitrynskyy, A.R. Ola Pasternak, Stefan Günther, David L. Zechel, Andreas Bechthold
    Journal of Biotechnology.2019; 292: 23.     CrossRef
  • Genomic Insights into Evolution of AdpA Family Master Regulators of Morphological Differentiation and Secondary Metabolism in Streptomyces
    Mariia Rabyk, Oleksandr Yushchuk, Ihor Rokytskyy, Maria Anisimova, Bohdan Ostash
    Journal of Molecular Evolution.2018; 86(3-4): 204.     CrossRef
  • Global regulator BldA regulates morphological differentiation and lincomycin production in Streptomyces lincolnensis
    Bingbing Hou, Liyuan Tao, Xiaoyu Zhu, Wei Wu, Meijin Guo, Jiang Ye, Haizhen Wu, Huizhan Zhang
    Applied Microbiology and Biotechnology.2018; 102(9): 4101.     CrossRef
  • Genome-guided exploration of metabolic features of Streptomyces peucetius ATCC 27952: past, current, and prospect
    Nguyen Huy Thuan, Dipesh Dhakal, Anaya Raj Pokhrel, Luan Luong Chu, Thi Thuy Van Pham, Anil Shrestha, Jae Kyung Sohng
    Applied Microbiology and Biotechnology.2018; 102(10): 4355.     CrossRef
  • Rational engineering of Streptomyces albus J1074 for the overexpression of secondary metabolite gene clusters
    Dimitris Kallifidas, Guangde Jiang, Yousong Ding, Hendrik Luesch
    Microbial Cell Factories.2018;[Epub]     CrossRef
  • In conditions of over-expression, WblI, a WhiB-like transcriptional regulator, has a positive impact on the weak antibiotic production of Streptomyces lividans TK24
    Lan Yan, Qizhong Zhang, Marie-Joelle Virolle, Delin Xu, Dongsheng Zhou
    PLOS ONE.2017; 12(3): e0174781.     CrossRef
  • Tracking the Subtle Mutations Driving Host Sensing by the Plant Pathogen Streptomyces scabies
    Samuel Jourdan, Isolde M. Francis, Benoit Deflandre, Rosemary Loria, Sébastien Rigali, Karen L. Visick
    mSphere.2017;[Epub]     CrossRef
  • Properties of Streptomyces albus J1074 mutant deficient in tRNALeu UAA gene bldA
    Oksana Koshla, Maria Lopatniuk, Ihor Rokytskyy, Oleksandr Yushchuk, Yuriy Dacyuk, Victor Fedorenko, Andriy Luzhetskyy, Bohdan Ostash
    Archives of Microbiology.2017; 199(8): 1175.     CrossRef
  • Genome Analysis of the Fruiting Body-Forming Myxobacterium Chondromyces crocatus Reveals High Potential for Natural Product Biosynthesis
    Nestor Zaburannyi, Boyke Bunk, Josef Maier, Jörg Overmann, Rolf Müller, C. Vieille
    Applied and Environmental Microbiology.2016; 82(6): 1945.     CrossRef
  • Identification of the mRNA targets of tRNA-specific regulation using genome-wide simulation of translation
    Barbara Gorgoni, Luca Ciandrini, Matthew R. McFarland, M. Carmen Romano, Ian Stansfield
    Nucleic Acids Research.2016; : gkw630.     CrossRef
  • Overexpression of a pathway specific negative regulator enhances production of daunorubicin in bldA deficient Streptomyces peucetius ATCC 27952
    Anaya Raj Pokhrel, Amit Kumar Chaudhary, Hue Thi Nguyen, Dipesh Dhakal, Tuoi Thi Le, Anil Shrestha, Kwangkyoung Liou, Jae Kyung Sohng
    Microbiological Research.2016; 192: 96.     CrossRef
  • Identification and engineering of regulation-related genes toward improved kasugamycin production
    Chenchen Zhu, Qianjin Kang, Linquan Bai, Lin Cheng, Zixin Deng
    Applied Microbiology and Biotechnology.2016; 100(4): 1811.     CrossRef
  • Ribosomal frameshifting and transcriptional slippage: From genetic steganography and cryptography to adventitious use
    John F. Atkins, Gary Loughran, Pramod R. Bhatt, Andrew E. Firth, Pavel V. Baranov
    Nucleic Acids Research.2016; : gkw530.     CrossRef
  • Development of an Unnatural Amino Acid Incorporation System in the Actinobacterial Natural Product Producer Streptomyces venezuelae ATCC 15439
    Jingxuan He, Briana Van Treeck, Han B. Nguyen, Charles E. Melançon
    ACS Synthetic Biology.2016; 5(2): 125.     CrossRef
  • The Rare Codon AGA Is Involved in Regulation of Pyoluteorin Biosynthesis in Pseudomonas protegens Pf-5
    Qing Yan, Benjamin Philmus, Cedar Hesse, Max Kohen, Jeff H. Chang, Joyce E. Loper
    Frontiers in Microbiology.2016;[Epub]     CrossRef
  • Recent advances in understanding Streptomyces
    Keith F. Chater
    F1000Research.2016; 5: 2795.     CrossRef
  • Changing Biosynthetic Profiles by Expressing bldA in Streptomyces Strains
    Arne Gessner, Tanja Heitzler, Songya Zhang, Christine Klaus, Renato Murillo, Hanna Zhao, Stephanie Vanner, David L. Zechel, Andreas Bechthold
    ChemBioChem.2015; 16(15): 2244.     CrossRef
  • Genome Mining of Streptomyces sp. Tü 6176: Characterization of the Nataxazole Biosynthesis Pathway
    Carolina Cano‐Prieto, Raúl García‐Salcedo, Marina Sánchez‐Hidalgo, Alfredo F. Braña, Hans‐Peter Fiedler, Carmen Méndez, José A. Salas, Carlos Olano
    ChemBioChem.2015; 16(10): 1461.     CrossRef
  • Identification of BagI as a positive transcriptional regulator of bagremycin biosynthesis in engineered Streptomyces sp. Tü 4128
    Feng Liu, Dakui Xu, Yuchen Zhang, Yunxia Zhu, Jiang Ye, Huizhan Zhang
    Microbiological Research.2015; 173: 18.     CrossRef
  • Rifampicin-resistance, rpoB polymorphism and RNA polymerase genetic engineering
    Pietro Alifano, Carla Palumbo, Daniela Pasanisi, Adelfia Talà
    Journal of Biotechnology.2015; 202: 60.     CrossRef
  • Augmented genetic decoding: global, local and temporal alterations of decoding processes and codon meaning
    Pavel V. Baranov, John F. Atkins, Martina M. Yordanova
    Nature Reviews Genetics.2015; 16(9): 517.     CrossRef
  • The Gene bldA, a Regulator of Morphological Differentiation and Antibiotic Production in Streptomyces
    Stefanie Hackl, Andreas Bechthold
    Archiv der Pharmazie.2015; 348(7): 455.     CrossRef
  • Genetic and Proteomic Analyses of Pupylation in Streptomyces coelicolor
    Corey L. Compton, Michael S. Fernandopulle, Rohith T. Nagari, Jason K. Sello, W. W. Metcalf
    Journal of Bacteriology.2015; 197(17): 2747.     CrossRef
  • c-di-GMP signalling and the regulation of developmental transitions in streptomycetes
    Matthew J. Bush, Natalia Tschowri, Susan Schlimpert, Klas Flärdh, Mark J. Buttner
    Nature Reviews Microbiology.2015; 13(12): 749.     CrossRef
  • Construction and development of a novel expression system of Streptomyces
    Chengran Guan, Wenjing Cui, Xiaotian He, Xu Hu, Jun Xu, Guocheng Du, Jian Chen, Zhemin Zhou
    Protein Expression and Purification.2015; 113: 17.     CrossRef
  • Identified members of the Streptomyces lividans AdpA regulon involved in differentiation and secondary metabolism
    Aurélie Guyet, Nadia Benaroudj, Caroline Proux, Myriam Gominet, Jean-Yves Coppée, Philippe Mazodier
    BMC Microbiology.2014;[Epub]     CrossRef
  • Thaxtomin A Production and Virulence Are Controlled by Several bld Gene Global Regulators in Streptomyces scabies
    Dawn R. D. Bignell, Isolde M. Francis, Joanna K. Fyans, Rosemary Loria
    Molecular Plant-Microbe Interactions®.2014; 27(8): 875.     CrossRef
  • Developmental biology ofStreptomycesfrom the perspective of 100 actinobacterial genome sequences
    Govind Chandra, Keith F. Chater
    FEMS Microbiology Reviews.2014; 38(3): 345.     CrossRef
  • The gamma-butyrolactone receptors BulR1 and BulR2 of Streptomyces tsukubaensis: tacrolimus (FK506) and butyrolactone synthetases production control
    Zahra Salehi-Najafabadi, Carlos Barreiro, Antonio Rodríguez-García, Anthony Cruz, Gustavo E. López, Juan F. Martín
    Applied Microbiology and Biotechnology.2014; 98(11): 4919.     CrossRef
  • Gene networks regulating secondary metabolism in actinomycetes: Pleiotropic regulators
    M. V. Rabyk, B. O. Ostash, V. O. Fedorenko
    Cytology and Genetics.2014; 48(1): 55.     CrossRef
  • Specificity determinants for the two tRNA substrates of the cyclodipeptide synthase AlbC from Streptomyces noursei
    M. Moutiez, J. Seguin, M. Fonvielle, P. Belin, I. B. Jacques, E. Favry, M. Arthur, M. Gondry
    Nucleic Acids Research.2014; 42(11): 7247.     CrossRef
  • Actinomycetes biosynthetic potential: how to bridge in silico and in vivo?
    Yuriy Rebets, Elke Brötz, Bogdan Tokovenko, Andriy Luzhetskyy
    Journal of Industrial Microbiology and Biotechnology.2014; 41(2): 387.     CrossRef
  • Controlling translation elongation efficiency: tRNA regulation of ribosome flux on the mRNA
    Barbara Gorgoni, Elizabeth Marshall, Matthew R. McFarland, M. Carmen Romano, Ian Stansfield
    Biochemical Society Transactions.2014; 42(1): 160.     CrossRef
  • Collismycin A biosynthesis in Streptomyces sp. CS40 is regulated by iron levels through two pathway-specific regulators
    Natalia M. Vior, Carlos Olano, Ignacio García, Carmen Méndez, José A. Salas
    Microbiology.2014; 160(3): 467.     CrossRef
  • Genes Required for Aerial Growth, Cell Division, and Chromosome Segregation Are Targets of WhiA before Sporulation in Streptomyces venezuelae
    Matthew J. Bush, Maureen J. Bibb, Govind Chandra, Kim C. Findlay, Mark J. Buttner, Yves V. Brun
    mBio.2013;[Epub]     CrossRef
  • Pleiotropic regulatory genes bldA , adpA and absB are implicated in production of phosphoglycolipid antibiotic moenomycin
    Roman Makitrynskyy, Bohdan Ostash, Olga Tsypik, Yuriy Rebets, Emma Doud, Timothy Meredith, Andriy Luzhetskyy, Andreas Bechthold, Suzanne Walker, Victor Fedorenko
    Open Biology.2013; 3(10): 130121.     CrossRef
  • A Microbial Metagenome (Leucobactersp.) inCaenorhabditisWhole Genome Sequences
    Riccardo Percudani
    Bioinformatics and Biology Insights.2013; 7: BBI.S11064.     CrossRef
  • Molecular Regulation of Antibiotic Biosynthesis in Streptomyces
    Gang Liu, Keith F. Chater, Govind Chandra, Guoqing Niu, Huarong Tan
    Microbiology and Molecular Biology Reviews.2013; 77(1): 112.     CrossRef
  • Towards a new science of secondary metabolism
    Arryn Craney, Salman Ahmed, Justin Nodwell
    The Journal of Antibiotics.2013; 66(7): 387.     CrossRef
  • Recent advances in the biosynthesis of penicillins, cephalosporins and clavams and its regulation
    Gulay Ozcengiz, Arnold L. Demain
    Biotechnology Advances.2013; 31(2): 287.     CrossRef
  • 5S Clavam Biosynthesis Is Controlled by an Atypical Two-Component Regulatory System in Streptomyces clavuligerus
    Thomas Kwong, Nathan J. Zelyas, Hui Cai, Kapil Tahlan, Annie Wong, Susan E. Jensen
    Antimicrobial Agents and Chemotherapy.2012; 56(9): 4845.     CrossRef
  • Interspecies modulation of bacterial development through iron competition and siderophore piracy
    Matthew F. Traxler, Mohammad R. Seyedsayamdost, Jon Clardy, Roberto Kolter
    Molecular Microbiology.2012; 86(3): 628.     CrossRef
  • FK506 biosynthesis is regulated by two positive regulatory elements in Streptomyces tsukubaensis
    Dušan Goranovič, Marko Blažič, Vasilka Magdevska, Jaka Horvat, Enej Kuščer, Tomaž Polak, Javier Santos-Aberturas, Miriam Martínez-Castro, Carlos Barreiro, Peter Mrak, Gregor Kopitar, Gregor Kosec, Štefan Fujs, Juan F Martín, Hrvoje Petković
    BMC Microbiology.2012;[Epub]     CrossRef
  • Evaluation of Streptomyces coelicolor A3(2) as a heterologous expression host for the cyanobacterial protein kinase C activator lyngbyatoxin A
    Adam C. Jones, Sabine Ottilie, Alessandra S. Eustáquio, Daniel J. Edwards, Lena Gerwick, Bradley S. Moore, William H. Gerwick
    The FEBS Journal.2012; 279(7): 1243.     CrossRef
  • Signals and regulators that governStreptomycesdevelopment
    Joseph R. McCormick, Klas Flärdh
    FEMS Microbiology Reviews.2012; 36(1): 206.     CrossRef
  • Three pathway-specific regulators control streptolydigin biosynthesis in Streptomyces lydicus
    Cristina Gómez, Carlos Olano, Carmen Méndez, José A. Salas
    Microbiology.2012; 158(10): 2504.     CrossRef
  • Roles of fkbN in Positive Regulation and tcs7 in Negative Regulation of FK506 Biosynthesis in Streptomyces sp. Strain KCTC 11604BP
    SangJoon Mo, Young Ji Yoo, Yeon Hee Ban, Sung-Kwon Lee, Eunji Kim, Joo-Won Suh, Yeo Joon Yoon
    Applied and Environmental Microbiology.2012; 78(7): 2249.     CrossRef
  • Expression of the chaplin and rodlin hydrophobic sheath proteins in Streptomyces venezuelae is controlled by σBldN and a cognate anti‐sigma factor, RsbN
    Maureen J. Bibb, Ágota Domonkos, Govind Chandra, Mark J. Buttner
    Molecular Microbiology.2012; 84(6): 1033.     CrossRef
  • tRNA accumulation and suppression of the bldA phenotype during development in Streptomyces coelicolor
    B. M. Fredrik Pettersson, Leif A. Kirsebom
    Molecular Microbiology.2011; 79(6): 1602.     CrossRef
  • Novel Two-Component Systems Implied in Antibiotic Production in Streptomyces coelicolor
    Ana Yepes, Sergio Rico, Antonio Rodríguez-García, Ramón I. Santamaría, Margarita Díaz, Ching-Hong Yang
    PLoS ONE.2011; 6(5): e19980.     CrossRef
  • The regulation of the secondary metabolism of Streptomyces: new links and experimental advances
    Gilles P. van Wezel, Kenneth J. McDowall
    Natural Product Reports.2011; 28(7): 1311.     CrossRef
  • Strict regulation of morphological differentiation and secondary metabolism by a positive feedback loop between two global regulators AdpA and BldA in Streptomyces griseus
    Akiyoshi Higo, Sueharu Horinouchi, Yasuo Ohnishi
    Molecular Microbiology.2011; 81(6): 1607.     CrossRef
  • The Level of AdpA Directly Affects Expression of Developmental Genes in Streptomyces coelicolor
    Marcin Wolański, Rafał Donczew, Agnieszka Kois-Ostrowska, Paweł Masiewicz, Dagmara Jakimowicz, Jolanta Zakrzewska-Czerwińska
    Journal of Bacteriology.2011; 193(22): 6358.     CrossRef
  • SanG, a transcriptional activator, controls nikkomycin biosynthesis through binding to the sanN–sanO intergenic region in Streptomyces ansochromogenes
    Xihong He, Rui Li, Yuanyuan Pan, Gang Liu, Huarong Tan
    Microbiology .2010; 156(3): 828.     CrossRef
  • Differential proteomic analysis reveals novel links between primary metabolism and antibiotic production in Amycolatopsis balhimycina
    Giuseppe Gallo, Giovanni Renzone, Rosa Alduina, Efthimia Stegmann, Tilmann Weber, Anna Eliasson Lantz, Jette Thykaer, Fabio Sangiorgi, Andrea Scaloni, Anna Maria Puglia
    PROTEOMICS.2010; 10(7): 1336.     CrossRef
  • Adaptation of the Highly Productive T7 Expression System to Streptomyces lividans
    François-Xavier Lussier, François Denis, François Shareck
    Applied and Environmental Microbiology.2010; 76(3): 967.     CrossRef
  • Autoregulation of hpdR and its effect on CDA biosynthesis in Streptomyces coelicolor
    Haihua Yang, Yang An, Linqi Wang, Shuli Zhang, Yue Zhang, Yuqing Tian, Gang Liu, Huarong Tan
    Microbiology .2010; 156(9): 2641.     CrossRef
  • Regulation of the Biosynthesis of the Macrolide Antibiotic Spiramycin in Streptomyces ambofaciens
    Fatma Karray, Emmanuelle Darbon, Hoang Chuong Nguyen, Josette Gagnat, Jean-Luc Pernodet
    Journal of Bacteriology.2010; 192(21): 5813.     CrossRef
  • Moenomycin family antibiotics: chemical synthesis, biosynthesis, and biological activity
    Bohdan Ostash, Suzanne Walker
    Natural Product Reports.2010; 27(11): 1594.     CrossRef
  • Morphological differentiation and clavulanic acid formation are affected in a Streptomyces clavuligerus adpA-deleted mutant
    M. T. Lopez-Garcia, I. Santamarta, P. Liras
    Microbiology.2010; 156(8): 2354.     CrossRef
  • Quantitative Proteome Analysis of Streptomyces coelicolor Nonsporulating Liquid Cultures Demonstrates a Complex Differentiation Process Comparable to That Occurring in Sporulating Solid Cultures
    Angel Manteca, Hye R. Jung, Veit Schwämmle, Ole N. Jensen, Jesus Sanchez
    Journal of Proteome Research.2010; 9(9): 4801.     CrossRef
  • Genetically Engineered Lipopeptide Antibiotics Related to A54145 and Daptomycin with Improved Properties
    Kien T. Nguyen, Xiaowei He, Dylan C. Alexander, Chen Li, Jian-Qiao Gu, Carmela Mascio, Andrew Van Praagh, Larry Mortin, Min Chu, Jared A. Silverman, Paul Brian, Richard H. Baltz
    Antimicrobial Agents and Chemotherapy.2010; 54(4): 1404.     CrossRef
  • Genes essential for morphological development and antibiotic production in Streptomyces coelicolor are targets of BldD during vegetative growth
    Chris D. Den Hengst, Ngat T. Tran, Maureen J. Bibb, Govind Chandra, Brenda K. Leskiw, Mark J. Buttner
    Molecular Microbiology.2010; 78(2): 361.     CrossRef
  • The complex extracellular biology ofStreptomyces
    Keith F. Chater, Sandor Biró, Kye Joon Lee, Tracy Palmer, Hildgund Schrempf
    FEMS Microbiology Reviews.2010; 34(2): 171.     CrossRef
  • Streptomyces scabies 87-22 Contains a Coronafacic Acid-Like Biosynthetic Cluster That Contributes to Plant–Microbe Interactions
    Dawn R. D. Bignell, Ryan F. Seipke, José C. Huguet-Tapia, Alan H. Chambers, Ronald J. Parry, Rosemary Loria
    Molecular Plant-Microbe Interactions®.2010; 23(2): 161.     CrossRef
  • Characterization of γ-Butyrolactone Autoregulatory Signaling Gene Homologs in the Angucyclinone Polyketide WS5995B ProducerStreptomyces acidiscabies
    Frank G. Healy, Kevin P. Eaton, Prajit Limsirichai, Joel F. Aldrich, Alaina K. Plowman, Russell R. King
    Journal of Bacteriology.2009; 191(15): 4786.     CrossRef
  • The pleiotropic regulator AdpA‐L directly controls the pathway‐specific activator of nikkomycin biosynthesis in Streptomyces ansochromogenes
    Yuanyuan Pan, Gang Liu, Haihua Yang, Yuqing Tian, Huarong Tan
    Molecular Microbiology.2009; 72(3): 710.     CrossRef
  • The SmpB-tmRNA Tagging System Plays Important Roles in Streptomyces coelicolor Growth and Development
    Chunzhong Yang, John R. Glover, Christophe Herman
    PLoS ONE.2009; 4(2): e4459.     CrossRef
  • Deciphering Biosynthesis of the RNA Polymerase Inhibitor Streptolydigin and Generation of Glycosylated Derivatives
    Carlos Olano, Cristina Gómez, María Pérez, Martina Palomino, Antonio Pineda-Lucena, Rodrigo J. Carbajo, Alfredo F. Braña, Carmen Méndez, José A. Salas
    Chemistry & Biology.2009; 16(10): 1031.     CrossRef
  • Extracellular signalling, translational control, two repressors and an activator all contribute to the regulation of methylenomycin production inStreptomyces coelicolor
    Sean O'Rourke, Andreas Wietzorrek, Kay Fowler, Christophe Corre, Greg L. Challis, Keith F. Chater
    Molecular Microbiology.2009; 71(3): 763.     CrossRef
  • Evolutionary flux of potentially bldA-dependent Streptomyces genes containing the rare leucine codon TTA
    Govind Chandra, Keith F. Chater
    Antonie van Leeuwenhoek.2008; 94(1): 111.     CrossRef
  • novE and novG act as positive regulators of novobiocin biosynthesis
    Volker Dangel, Alessandra S. Eustáquio, Bertolt Gust, Lutz Heide
    Archives of Microbiology.2008; 190(5): 509.     CrossRef
  • SarA influences the sporulation and secondary metabolism inStreptomyces coelicolorM145
    Xijun Ou, Bo Zhang, Lin Zhang, Kai Dong, Chun Liu, Guoping Zhao, Xiaoming Ding
    Acta Biochimica et Biophysica Sinica.2008; 40(10): 877.     CrossRef
REVIEW] Intestinal microbiota and the immune system in metabolic diseases
Panida Sittipo , Stefani Lobionda , Yun Kyung Lee , Craig L. Maynard
J. Microbiol. 2018;56(3):154-162.   Published online February 28, 2018
DOI: https://doi.org/10.1007/s12275-018-7548-y
  • 433 View
  • 0 Download
  • 109 Crossref
AbstractAbstract PDF
The intestinal microbiota is comprised of millions of microorganisms that reside in the gastrointestinal tract and consistently interact with the host. Host factors such as diet and disease status affect the composition of the microbiota, while the microbiota itself produces metabolites that can further manipulate host physiology. Dysbiosis of the intestinal microbiota has been characterized in patients with certain metabolic diseases, some of which involve damage to the host intestinal epithelial barrier and alterations in the immune system. In this review, we will discuss the consequences of dietdependent bacterial dysbiosis in the gastrointestinal tract, and how the associated interaction with epithelial and immune cells impacts metabolic diseases.

Citations

Citations to this article as recorded by  
  • The gut microbiome, immune modulation, and cognitive decline: insights on the gut-brain axis
    Ruyi Zhang, Ning Ding, Xicui Feng, Wenli Liao
    Frontiers in Immunology.2025;[Epub]     CrossRef
  • Integrated analysis of the microbiome, culturable strains, and substrate microenvironment reveals significant shifts in bacterial community of Angelica sinensis from fresh roots to medicinal slices
    Xiaopeng Guo, Xuee Li, Rong Guo, Shengli Zhang, Ying Sun, Bin Ji, Yinan Peng, Hushan Shang, Yue Wu
    Biologia.2025; 80(4): 1037.     CrossRef
  • Effects of simulated digestion and prebiotics properties of polysaccharides extracted from Imperatae Rhizoma based on different pilot processes
    Mengge Sun, Haotian Huang, Haibao Tang, Jiajie Chen, Wei Chen, Dongsheng Yang
    Frontiers in Microbiology.2025;[Epub]     CrossRef
  • Small Intestine on a Chip Demonstrates Physiologic Mucus Secretion in the Presence of Lacticaseibacillus rhamnosus Biofilm
    Sanat Kumar Dash, Cláudia N. H. Marques, Gretchen J. Mahler
    Biotechnology and Bioengineering.2025; 122(7): 1816.     CrossRef
  • Gut microbiota-derived metabolites and chronic inflammatory diseases
    Alejandra Vargas, Benjamin L. Robinson, Kevin Houston, Ana Rosa Vilela Sangay, Michael Saadeh, Steve D’Souza, David A. Johnson
    Exploration of Medicine.2025;[Epub]     CrossRef
  • Lactobacillus fermentum 166, Derived from Yak Yogurt from Tibetan Areas of Sichuan, Improves High-Fat-Diet-Induced Hyperlipidemia by Modulating Gut Microbiota and Liver- and Gut-Related Pathways
    Shiqi Zhang, Limei Xu, Chenglin Zhu, Jing Li, Yu Fu, Weiming Shuang, Lianhong Chen
    Foods.2025; 14(5): 867.     CrossRef
  • The effects of fermented Astragalus polysaccharides on the growth performance, antioxidant capacity and intestinal health of broilers
    Zhenkun Liu, Huaidan Zhang, Xianxin Chen, Weiwei Yu, Shiyi Li, Lijuan Kang, Songlin Li, Yilong Jiang, Xinhong Zhou
    Frontiers in Veterinary Science.2025;[Epub]     CrossRef
  • Circulating Interleukin-22 Is a Biomarker for Newly Diagnosed Type 2 Diabetes Mellitus and Associated with Hypoglycemic Effect of Sitagliptin
    Peiye Sun, Yuxi Xiao, Yuan Dong, Yixiang Feng, Hongting Zheng, Xiaoyu Liao
    Diabetes, Metabolic Syndrome and Obesity.2025; Volume 18: 703.     CrossRef
  • Research Progress in the Relationship between Intestinal Flora and Diabetes Mellitus
    Yingji Lai, Xianfeng Huang, Hongwei Sun, Qi Hui, Shanshan Hu
    Endocrine, Metabolic & Immune Disorders - Drug Targets.2025; 25(4): 281.     CrossRef
  • Effects of multidrug-resistant bacteria and multi-antibiotic combination on intestinal microbiota in mice
    Jing Ma, Zheng Gong, Meiling Kang, Zhongjing Tian, Liping You, Chengshi Ding
    Frontiers in Microbiology.2025;[Epub]     CrossRef
  • Forging a New Frontier: Antimicrobial Peptides and Nanotechnology Converging to Conquer Gastrointestinal Pathogens
    Christian Shleider Carnero Canales, Cesar Augusto Roque‐Borda, Jessica Ingrid Marquez Cazorla, Renzo Marianito Marquez Cazorla, Uner Josseph Pinto Apaza, Vanderson de Jesus Silva, Laura Maria Duran Gleriani Primo, Maura Jennifer Martínez‐Morales, Rafael M
    Small.2025;[Epub]     CrossRef
  • Vibrio mimicus digests intestinal peritrophin-44 and disrupts hemolymph bacterial balance in crustaceans
    Rui-Geng Niu, Cheng-Ming Yin, Jia-Jun Mai, Jiang-Feng Lan
    Developmental & Comparative Immunology.2025; 167: 105390.     CrossRef
  • The role of intestinal microbiota and its metabolites in the occurrence and intervention of obesity
    Yang Gao, Wenhui Liu, Xue Ma, Min Xue, Yingying Li, Shanshan Bi, Huan Leng
    Frontiers in Microbiology.2025;[Epub]     CrossRef
  • Traditional Chinese herbal formulas modulate inflammatory mediators, antioxidant enzyme levels, and ruminal microbiota composition in postpartum female Yaks
    Yanbin Zhu, Jia Wang, Xiaojuan Zhang, Yangji Cidan, Hongzhuang Wang, Panduo Pubu, Munwar Ali, Kun Li, Wangdui Basang
    Scientific Reports.2025;[Epub]     CrossRef
  • Astragalus polysaccharide slows the dissemination of antibiotic resistance genes and reduces the prevalence of opportunistic pathogens in the fish gut
    Wei Li, Jieyi Zeng, Ningguo Zheng, Chaorong Ge, Yaying Li, Xinli An, Huaiying Yao
    Journal of Environmental Management.2025; 389: 126058.     CrossRef
  • Comparative analysis of gut microbiota in free range and house fed yaks from Linzhou County
    Hongzhuang Wang, Munwar Ali, Yong Zhu, Xiaoying Chen, Dongyang Lu, Yang Liu, Kun Li, Chengfu Zhang
    Scientific Reports.2025;[Epub]     CrossRef
  • Gut microbiota and tuberculosis
    Yanhua Liu, Ling Yang, Maryam Meskini, Anjana Goel, Monique Opperman, Sagar Singh Shyamal, Ajay Manaithiya, Meng Xiao, Ruizi Ni, Yajing An, Mingming Zhang, Yuan Tian, Shuang Zhou, Zhaoyang Ye, Li Zhuang, Linsheng Li, Istuti Saraswat, Ankita Kar, Syed Luqm
    iMeta.2025;[Epub]     CrossRef
  • Emerging therapy targets to modulate microbiome-mediated effects evident in cardiovascular disease
    Dorothea Katharina Hoffelner, Tim Hendrikx
    Frontiers in Cardiovascular Medicine.2025;[Epub]     CrossRef
  • Differential analysis of serum immunology and gut microbiota in patients with gastrointestinal diseases
    Huan Zhu Chen, Yu Yang Zeng, Guo Xiong Cai, Wei Dan Gu, YaLi Yang
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • Effects of forages on the microbiota of crossed sheep on cold Plateau
    Yue Ren, Renzeng Ciwang, Khalid Mehmood, Kun Li
    Animal Biotechnology.2024;[Epub]     CrossRef
  • Gut Microbiota and Tryptophan Metabolism in Pathogenesis of Ischemic Stroke: A Potential Role for Food Homologous Plants
    Lei Wang, Na Qin, Liuliu Shi, Rujuan Liu, Ting Zhu
    Molecular Nutrition & Food Research.2024;[Epub]     CrossRef
  • High-Salt Diet and Intestinal Microbiota: Influence on Cardiovascular Disease and Inflammatory Bowel Disease
    Xueyang Wang, Fuyuan Lang, Dan Liu
    Biology.2024; 13(9): 674.     CrossRef
  • The immunoregulatory role of gut microbiota in the incidence, progression, and therapy of breast cancer
    Kaiyang Xue, Jiawei Li, Ruijie Huang
    Frontiers in Cellular and Infection Microbiology.2024;[Epub]     CrossRef
  • Effect of Gegen Qinlian Decoction on the regulation of gut microbiota and metabolites in type II diabetic rats
    Jinyao Xu, Zhenkai Zou, Xuanyi Li, Xiangjun Sun, Xufeng Wang, Feng Qin, Abulikemu Abulizi, Qian Chen, Zhigang Pan, Hexiao Shen, Yongling Lv, Ruicheng Yan
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • Antibiotic exposure and risk of overweight/obesity in children: a biomonitoring-based study from eastern Jiangsu, China
    Huamin Sun, Jianping Huang, Yijing Zhou, Xinying Guo, Man Jiao, Xingchen Zhu, Weiwei Tan, Weibing Zhang
    Frontiers in Public Health.2024;[Epub]     CrossRef
  • Advances in gut–brain organ chips
    Yu Zhang, Si‐Ming Lu, Jian‐Jian Zhuang, Li‐Guo Liang
    Cell Proliferation.2024;[Epub]     CrossRef
  • Anaerolentibacter hominis gen. nov. sp. nov., Diplocloster hominis sp. nov. and Pilosibacter fragilis gen. nov. sp. nov., isolated from human faeces
    Yang Yan, Qing-hua Zhao, Chang Xu, Rui-qi Wei, He Jiang, Shuang-jiang Liu
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Liquid-liquid separation in gut immunity
    Zhaoyang Wang, Lili Zhou, Xiaolan Zhong, Yiguo Jiang, Zhentao Zhang, Wanglin Li
    Frontiers in Immunology.2024;[Epub]     CrossRef
  • Shared signaling pathways and targeted therapy by natural bioactive compounds for obesity and type 2 diabetes
    Shuhua Tian, Haizhen Zhao, Haizhao Song
    Critical Reviews in Food Science and Nutrition.2024; 64(15): 5039.     CrossRef
  • Carbon metabolism in the regulation of macrophage functions
    Zhending Gan, Muyang Zhao, Yaoyao Xia, Yuqi Yan, Wenkai Ren
    Trends in Endocrinology & Metabolism.2024; 35(1): 62.     CrossRef
  • Simulated space environmental factors of weightlessness, noise and low atmospheric pressure differentially affect the diurnal rhythm and the gut microbiome
    Xihui Gan, Jianwei Zhao, Silin Li, Guanghan Kan, Yin Zhang, Bo Wang, Peng Zhang, Xiaohong Ma, Hongni Tian, Meimei Liao, Dapeng Ju, Shuihong Xu, Xiaoping Chen, Jinhu Guo
    Life Sciences in Space Research.2024; 40: 115.     CrossRef
  • Influence of Varied Environment Conditions on the Gut Microbiota of Yaks
    Yanbin Zhu, Jiayi Tian, Yangji Cidan, Hongzhuang Wang, Kun Li, Wangdui Basang
    Animals.2024; 14(11): 1570.     CrossRef
  • Association between intestinal microflora and obesity
    Maryana SAVYTSKA, Marko KOZYK, Kateryna STRUBCHEVSKA, Kateryna YOSYPENKO, Tetyana FALALYEYEVA, Nazarii KOBYLIAK, Luigi BOCCUTO, Rinaldo PELLICANO, Sharmila FAGOONEE, Emidio SCARPELLINI, Ludovico ABENAVOLI
    Minerva Gastroenterology.2024;[Epub]     CrossRef
  • A study on the association between gut microbiota, inflammation, and type 2 diabetes
    Nannan Liu, Xuehua Yan, Bohan Lv, Yanxiang Wu, Xuehong Hu, Chunyan Zheng, Siyu Tao, Ruxue Deng, Jinfang Dou, Binfang Zeng, Guangjian Jiang
    Applied Microbiology and Biotechnology.2024;[Epub]     CrossRef
  • Healthy Diets and Lifestyles in the World: Mediterranean and Blue Zone People Live Longer. Special Focus on Gut Microbiota and Some Food Components
    Luigi Santacroce, Lucrezia Bottalico, Ioannis Alexandros Charitos, Kastriot Haxhirexha, Skender Topi, Emilio Jirillo
    Endocrine, Metabolic & Immune Disorders - Drug Targets.2024; 24(15): 1774.     CrossRef
  • Comparative Analysis of Microbiota in Jiani Yaks with Different Rib Structures
    Yangji Cidan, Sijia Lu, Hongzhuang Wang, Jia Wang, Munwar Ali, Dalia Fouad, Farid S. Ataya, Yanbin Zhu, Wangdui Basang, Kun Li
    Life.2024; 14(11): 1458.     CrossRef
  • Gut Microbiota-Immune System Interactions in Health and Neurodegenerative Diseases: Insights into Molecular Mechanisms and Therapeutic Applications
    Rengasamy Balakrishnan, Shin-Il Kang, Ji-Yeon Lee, Yang-Kook Rho, Byoung-Kook Kim, Dong-Kug Choi
    Aging and disease.2024;[Epub]     CrossRef
  • The influence of Akkermansia muciniphila on intestinal barrier function
    Chunyan Mo, Xiran Lou, Jinfang Xue, Zhuange Shi, Yifang Zhao, Fuping Wang, Guobing Chen
    Gut Pathogens.2024;[Epub]     CrossRef
  • Global research landscape of Peutz-Jeghers syndrome and successful endoscopic management of intestinal intussusception in patients with recurrent laparotomies
    Qi Sun, Xiao-Ying Wang, Guang-Jin Guo, Lei Wang, Li-Min Meng, Yun-Fei Guo, Tao Sun, Shou-Bin Ning
    World Journal of Gastrointestinal Surgery.2024; 16(8): 2702.     CrossRef
  • The causal relationship between gut microbiota and alopecia areata: a Mendelian randomization analysis
    Dezhao Bi, Jin Tong Tey, Dan Yao, Yutian Cao, Minyu Qian, Jianxin Shi, Shun Guo
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • Intestinal microbiota protects against methylmercury-induced neurotoxicity
    Tao Ke, André Rajoo, Alexey A. Tinkov, Anatoly V. Skalny, Yousef Tizabi, Joao B. T. Rocha, Aaron B. Bowman, Michael Aschner
    BioMetals.2024; 37(3): 561.     CrossRef
  • Vitexin-rhamnoside encapsulated with zein-pectin nanoparticles relieved high-fat diet induced lipid metabolism disorders in mice by altering the gut microbiota
    Xin Huang, Xiaopei Hu, Suhong Li, Tuoping Li
    International Journal of Biological Macromolecules.2024; 264: 130704.     CrossRef
  • Extracellular Vesicles Derived from Lipopolysaccharide-Pretreated Periodontal Ligament Stem Cells Ameliorate Inflammatory Responses in Experimental Colitis via the PI3K/AKT Signaling Pathway
    Shuai Tang, Wenyu Feng, Zekun Li, Xinjuan Liu, Tong Yang, Fulan Wei, Gang Ding
    International Journal of Nanomedicine.2024; Volume 19: 11997.     CrossRef
  • The digestive system under microgravity environment: changes, mechanisms and the prospects of the future
    Priming Sun, Xiaopei Gao, Dan Wei, Jun Ge, Xiangling Deng, Hongyang Chen, Heming Yang, Junfeng Gao, Jianwu Yang
    Gastroenterology & Endoscopy.2024;[Epub]     CrossRef
  • Visceral adiposity in postmenopausal women is associated with a pro-inflammatory gut microbiome and immunogenic metabolic endotoxemia
    Mohamed Gaber, Adam S. Wilson, Amy E. Millen, Kathleen M. Hovey, Michael J. LaMonte, Jean Wactawski-Wende, Heather M. Ochs-Balcom, Katherine L. Cook
    Microbiome.2024;[Epub]     CrossRef
  • Fecal Microbiota Transplantation: Indications, Methods, and Challenges
    Jee Young Lee, Yehwon Kim, Jiyoun Kim, Jiyeun Kate Kim
    Journal of Microbiology.2024; 62(12): 1057.     CrossRef
  • Exploring the effects of astragalus polysaccharide food supplementation on growth performance, immunity, antioxidant capacity, and intestinal microflora in Chinese mitten crabs
    Xueyan Shi, Chao Wu, Hui Ma, Jinsong Liu, Chunsheng Fu, Ruoyu Zhou, Ying Jiang, Ruiqiang Zhang
    Aquaculture Reports.2024; 34: 101908.     CrossRef
  • A Metabolite Perspective on the Involvement of the Gut Microbiota in Type 2 Diabetes
    Yifeng Fu, Siying Li, Yunhua Xiao, Gang Liu, Jun Fang
    International Journal of Molecular Sciences.2023; 24(19): 14991.     CrossRef
  • Antioxidant, antihyperglycemic, and antihyperlipidemic properties of Chimonanthus salicifolius S. Y. Hu leaves in experimental animals: modulation of thioredoxin and glutathione systems, renal water reabsorption, and gut microbiota
    Ruixia Dong, Junjie Pan, Guangshan Zhao, Qiuyan Zhao, Shiqiong Wang, Ning Li, Lianjun Song, Xianqing Huang, Shuxing Miao, Junhui Ying, Fangying Wu, Dongxu Wang, Kejun Cheng, Daniel Granato, Qiuyan Ban
    Frontiers in Nutrition.2023;[Epub]     CrossRef
  • Influence of changes in the human intestinal microbiota on slowing the wound process in overweight persons
    Ye. P. Sukhoparova, I. E. Khrustaleva, Ye. V. Zinoviev
    Issues of Reconstructive and Plastic Surgery.2023; 26(1): 6.     CrossRef
  • Astragalus polysaccharide attenuates bleomycin-induced pulmonary fibrosis by inhibiting TLR4/ NF-κB signaling pathway and regulating gut microbiota
    Yi Wei, Ming Qi, Chao Liu, Lujia Li
    European Journal of Pharmacology.2023; 944: 175594.     CrossRef
  • Proanthocyanidins: Impact on Gut Microbiota and Intestinal Action Mechanisms in the Prevention and Treatment of Metabolic Syndrome
    Rocío Redondo-Castillejo, Alba Garcimartín, Marina Hernández-Martín, María Elvira López-Oliva, Aránzazu Bocanegra, Adrián Macho-González, Sara Bastida, Juana Benedí, Francisco J. Sánchez-Muniz
    International Journal of Molecular Sciences.2023; 24(6): 5369.     CrossRef
  • Prediction of the Complicated Wound Process in Overweight Patients Depending on the Composition of the Intestinal Microbiota
    Elena Petrovna Suhoparova, Evgeny Vladimirovich Zinoviev, Irina Eduardovna Khrustaleva, Ekaterina Sergeevna Kniazeva
    Journal of Experimental and Clinical Surgery.2023; 16(1): 10.     CrossRef
  • Berberine is a potential alternative for metformin with good regulatory effect on lipids in treating metabolic diseases
    Hui-Hui Guo, Hao-Ran Shen, Lu-Lu Wang, Zhi-Gang Luo, Jin-Lan Zhang, Hong-Juan Zhang, Tian-Le Gao, Yan-Xing Han, Jian-Dong Jiang
    Biomedicine & Pharmacotherapy.2023; 163: 114754.     CrossRef
  • Natural polysaccharides protect against diet-induced obesity by improving lipid metabolism and regulating the immune system
    Chao Tang, Yuxin Wang, Dan Chen, Man Zhang, Jingguo Xu, Chen Xu, Jun Liu, Juan Kan, Changhai Jin
    Food Research International.2023; 172: 113192.     CrossRef
  • Paraprobiotic Lacticaseibacillus rhamnosus Protects Intestinal Damage in an Experimental Murine Model of Mucositis
    Luísa Martins Trindade, Lícia Torres, Isabel David Matos, Vivian Correia Miranda, Luís Cláudio Lima de Jesus, Gregório Cavalcante, Jonathan Júnio de Souza Oliveira, Geovanni Dantas Cassali, Pamela Mancha-Agresti, Vasco Ariston de Carvalho Azevedo, Tatiani
    Probiotics and Antimicrobial Proteins.2023; 15(2): 338.     CrossRef
  • The Role of Dietary Fibre in Enteral Nutrition in Sepsis Prevention and Therapy: A Narrative Review
    Valentina V. Huwiler, Melanie Scalise, Katja A. Schönenberger, Stefan Mühlebach, Zeno Stanga, Maria L. Balmer
    Nutrients.2023; 15(11): 2489.     CrossRef
  • Optical imaging of the small intestine immune compartment across scales
    Arielle Louise Planchette, Cédric Schmidt, Olivier Burri, Mercedes Gomez de Agüero, Aleksandra Radenovic, Alessio Mylonas, Jérôme Extermann
    Communications Biology.2023;[Epub]     CrossRef
  • Gut microbiome plays a vital role in post-stroke injury repair by mediating neuroinflammation
    Airu Huang, Ling Ji, Yamei Li, Yufeng Li, Qian Yu
    International Immunopharmacology.2023; 118: 110126.     CrossRef
  • The Local Microbiome in Esophageal Cancer and Treatment Response: A Review of Emerging Data and Future Directions
    Abhishek Pandey, Christopher H. Lieu, Sunnie S. Kim
    Cancers.2023; 15(14): 3562.     CrossRef
  • Influence of symbiotic bacteria on the susceptibility of Plagiodera versicolora to Beauveria bassiana infection
    Mei Liu, Jinli Ding, Min Lu
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • The function of gut microbiota in immune-related neurological disorders: a review
    Panida Sittipo, Jaeyoon Choi, Soojin Lee, Yun Kyung Lee
    Journal of Neuroinflammation.2022;[Epub]     CrossRef
  • Dynamics of gut microbiota during pregnancy in women with TPOAb-positive subclinical hypothyroidism: a prospective cohort study
    Min Wu, Cheng Chi, Yuxi Yang, Shan Guo, Tianhe Li, Muqing Gu, Tingting Zhang, Huimin Gao, Ruixia Liu, Chenghong Yin
    BMC Pregnancy and Childbirth.2022;[Epub]     CrossRef
  • Gut and Vaginal Microbiomes in PCOS: Implications for Women’s Health
    Yuanyuan Gu, Guannan Zhou, Fangyue Zhou, Yao Li, Qiongwei Wu, Hongyu He, Yi Zhang, Chengbin Ma, Jingxin Ding, Keqin Hua
    Frontiers in Endocrinology.2022;[Epub]     CrossRef
  • Polydatin, A Glycoside of Resveratrol, Is Better Than Resveratrol in Alleviating Non-alcoholic Fatty Liver Disease in Mice Fed a High-Fructose Diet
    Guangshan Zhao, Lian Yang, Wenshen Zhong, Yuze Hu, Yu Tan, Zhe Ren, Qiuyan Ban, Chung S. Yang, Yifei Wang, Zhiping Wang
    Frontiers in Nutrition.2022;[Epub]     CrossRef
  • Vitamin D impacts on the intestinal health, immune status and metabolism in turbot (Scophthalmus maximus L.)
    Rui Shao, Jiayu Liu, Yawen Lan, Xinmeng Liao, Jinjin Zhang, Weiqi Xu, Kangsen Mai, Qinghui Ai, Min Wan
    British Journal of Nutrition.2022; 128(11): 2083.     CrossRef
  • Positive fecal immunochemical test results are associated with non-colorectal cancer mortality
    Yoon Suk Jung, Jinhee Lee, Chang Mo Moon
    The Korean Journal of Internal Medicine.2022; 37(2): 313.     CrossRef
  • Lactobacillus reuteri MJM60668 Prevent Progression of Non-Alcoholic Fatty Liver Disease through Anti-Adipogenesis and Anti-Inflammatory Pathway
    Pia Werlinger, Huong Thi Nguyen, Mingkun Gu, Joo-Hyung Cho, Jinhua Cheng, Joo-Won Suh
    Microorganisms.2022; 10(11): 2203.     CrossRef
  • Pro-inflammatory effects of silver nanoparticles in the intestine
    Adelaide Sousa, Tracey D. Bradshaw, Daniela Ribeiro, Eduarda Fernandes, Marisa Freitas
    Archives of Toxicology.2022; 96(6): 1551.     CrossRef
  • Intestinal Flora: A Potential New Regulator of Cardiovascular Disease
    Yifei Zou, Xianjing Song, Ning Liu, Wei Sun, Bin Liu
    Aging and disease.2022; 13(3): 753.     CrossRef
  • Effects of dietary glyceryl monolaurate supplementation on growth performance, non-specific immunity, antioxidant status and intestinal microflora of Chinese mitten crabs
    Chunsheng Fu, Zhenchuan Cui, Xueyan Shi, Jinsong Liu, Ying Jiang, Ruiqiang Zhang
    Fish & Shellfish Immunology.2022; 125: 65.     CrossRef
  • Scorias spongiosa Polysaccharides Promote the Antioxidant and Anti-Inflammatory Capacity and Its Effect on Intestinal Microbiota in Mice
    Yingyin Xu, Zhiyuan Zhang, Huiyu Feng, Jie Tang, Weihong Peng, Ying Chen, Jie Zhou, Yong Wang
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Study of Correlation between Intestinal Microbiota and Traditional Chinese Medicine Syndrome of Patients with Colon Cancer
    Lu-Yao Tuo, Zhi-Rui Zhang, Hong Xin, Xu Chu, Wei Xu, Huiying Fu
    Evidence-Based Complementary and Alternative Medicine.2022; 2022: 1.     CrossRef
  • Pathogenomics of Streptococcus ilei sp. nov., a newly identified pathogen ubiquitous in human microbiome
    Dong-Wook Hyun, Jae-Yun Lee, Min-Soo Kim, Na-Ri Shin, Tae Woong Whon, Kyung Hyun Kim, Pil Soo Kim, Euon Jung Tak, Mi-Ja Jung, June Young Lee, Hyun Sik Kim, Woorim Kang, Hojun Sung, Che Ok Jeon, Jin-Woo Bae
    Journal of Microbiology.2021; 59(8): 792.     CrossRef
  • Gut-derived Shewanella induces the differentially expressed proteins in leukocytes of Lampetra japonica
    Yingying Li, Wenying Zhang, Yihua Zhao, Ting Zhu, Qingwei Li
    Journal of Proteomics.2021; 236: 104123.     CrossRef
  • Vaccarin enhances intestinal barrier function in type 2 diabetic mice
    Jiang-nan Sun, Xiao-yi Yu, Bao Hou, Min Ai, Meng-ting Qi, Xin-yu Ma, Ming-jie Cai, Min Gao, Wei-wei Cai, Lu-lu Ni, Fei Xu, Yue-tao Zhou, Li-ying Qiu
    European Journal of Pharmacology.2021; 908: 174375.     CrossRef
  • Is early life adversity a trigger towards inflammageing?
    Myriam P. Merz, Jonathan D. Turner
    Experimental Gerontology.2021; 150: 111377.     CrossRef
  • Small Intestinal Bacterial Overgrowth in Subclinical Hypothyroidism of Pregnant Women
    Biao Wang, Yajuan Xu, Xiaofeng Hou, Jingjing Li, Yanjun Cai, Yingqi Hao, Qian Ouyang, Bo Wu, Zongzong Sun, Miao Zhang, Yanjie Ban
    Frontiers in Endocrinology.2021;[Epub]     CrossRef
  • Bacterial translocation in patients undergoing major gastrointestinal surgery and its role in postoperative sepsis
    Christos Doudakmanis, Konstantinos Bouliaris, Christina Kolla, Matthaios Efthimiou, Georgios D Koukoulis
    World Journal of Gastrointestinal Pathophysiology.2021; 12(6): 106.     CrossRef
  • Therapeutic potential of human umbilical cord mesenchymal stem cells on aortic atherosclerotic plaque in a high-fat diet rabbit model
    Yanhong Li, Guiying Shi, Yunlin Han, Haiquan Shang, Huiwu Li, Wei Liang, Wenjie Zhao, Lin Bai, Chuan Qin
    Stem Cell Research & Therapy.2021;[Epub]     CrossRef
  • Gut microbiome and human health under the space environment
    R. Siddiqui, N. Akbar, N.A. Khan
    Journal of Applied Microbiology.2021; 130(1): 14.     CrossRef
  • Exploration of the Characteristics of Intestinal Microbiota and Metabolomics in Different Rat Models of Mongolian Medicine
    Riao Dao, Dongxing Wu, Huan Wang, Habur Jin, Li Li, Xiquan Fu, Chula Sa, Eerdunchaolu, Nguyen Phuoc Long
    Evidence-Based Complementary and Alternative Medicine.2021; 2021: 1.     CrossRef
  • Protective and ameliorating effects of probiotics against diet-induced obesity: A review
    Chao Tang, Liangyu Kong, Mengyuan Shan, Zhaoxin Lu, Yingjian Lu
    Food Research International.2021; 147: 110490.     CrossRef
  • The Role of Polyphenols in Regulation of Heat Shock Proteins and Gut Microbiota in Weaning Stress
    Tarique Hussain, Jing Wang, Ghulam Murtaza, Elsayed Metwally, Huansheng Yang, Muhammad Saleem Kalhoro, Dildar Hussain Kalhoro, Baban Ali Rahu, Bie Tan, Raja Ghazanfar Ali Sahito, Muhammad Ismail Chughtai, Yulong Yin, Ammad Ahmad Farooqi
    Oxidative Medicine and Cellular Longevity.2021;[Epub]     CrossRef
  • The Gut Microbial-Derived Metabolite Trimethylamine N-Oxide and Atrial Fibrillation: Relationships, Mechanisms, and Therapeutic Strategies
    Rui Huang, Li Yan, Yuhua Lei
    Clinical Interventions in Aging.2021; Volume 16: 1975.     CrossRef
  • Effects of α-glyceryl monolaurate on growth, immune function, volatile fatty acids, and gut microbiota in broiler chickens
    Junhong Lan, Guangyong Chen, Gungtian Cao, Jianing Tang, Qing Li, Bing Zhang, Caimei Yang
    Poultry Science.2021; 100(3): 100875.     CrossRef
  • miR‑133a‑3p regulates the proliferation and apoptosis of intestinal epithelial cells by modulating the expression of TAGLN2
    Xiaoxi Tian, Lihong Li, Guoqiang Fu, Jianyu Wang, Qianfeng  He, Cuicui Zhang, Bingrui Qin, Jiahui Wang
    Experimental and Therapeutic Medicine.2021;[Epub]     CrossRef
  • Description of Ornithinimicrobium ciconiae sp. nov., and Ornithinimicrobium avium sp. nov., isolated from the faeces of the endangered and near-threatened birds
    So-Yeon Lee, Hojun Sung, Pil Soo Kim, Hyun Sik Kim, Jae-Yun Lee, June-Young Lee, Yun-Seok Jeong, Euon Jung Tak, Jeong Eun Han, Dong-Wook Hyun, Jin-Woo Bae
    Journal of Microbiology.2021; 59(11): 978.     CrossRef
  • Overview of the microbiota in the gut-liver axis in viral B and C hepatitis
    Maria Adriana Neag, Andrei Otto Mitre, Adrian Catinean, Anca Dana Buzoianu
    World Journal of Gastroenterology.2021; 27(43): 7446.     CrossRef
  • Mutual interaction of microbiota and host immunity during health and diseases
    Di Wu, Yinlian Zhang, Suwei Dong, Chao Zhong
    Biophysics Reports.2021; 7(4): 326.     CrossRef
  • Phlorizin ameliorates obesity-associated endotoxemia and insulin resistance in high-fat diet-fed mice by targeting the gut microbiota and intestinal barrier integrity
    Xiao-Yu Zhang, Jiang Chen, Kang Yi, Ling Peng, Jie Xie, Xun Gou, Tong Peng, Lin Tang
    Gut Microbes.2020; 12(1): 1842990.     CrossRef
  • Adhesion and anti-inflammatory potential ofLactobacillus rhamnosusGG in a sea buckthorn based beverage matrix
    Srijita Sireswar, Sutapa Biswas, Gargi Dey
    Food & Function.2020; 11(3): 2555.     CrossRef
  • Understanding the Heterogeneity of Obesity and the Relationship to the Brain-Gut Axis
    Tony K. W. Hung, Tien S. Dong, Zixi Chen, David Elashoff, Janet S. Sinsheimer, Jonathan P. Jacobs, Venu Lagishetty, Priten Vora, Jean Stains, Emeran A. Mayer, Arpana Gupta
    Nutrients.2020; 12(12): 3701.     CrossRef
  • Changes in Intestinal Microbiota Are Associated with Islet Function in a Mouse Model of Dietary Vitamin A Deficiency
    Yunting Zhou, Junming Zhou, Yumin Zhang, Jun Tang, Bo Sun, Wei Xu, Xiaohang Wang, Yang Chen, Zilin Sun
    Journal of Diabetes Research.2020; 2020: 1.     CrossRef
  • Potential role of ovomucin and its peptides in modulation of intestinal health: A review
    Aobai Tu, Xue Zhao, Yuanyuan Shan, Xin Lü
    International Journal of Biological Macromolecules.2020; 162: 385.     CrossRef
  • High-fat-diet–induced modulations of leptin signaling and gastric microbiota drive precancerous lesions in the stomach
    Seiya Arita, Kyoko Inagaki-Ohara
    Nutrition.2019; 67-68: 110556.     CrossRef
  • “Candida AlbicansInteractions With The Host: Crossing The Intestinal Epithelial Barrier”
    Louise Basmaciyan, Fabienne Bon, Tracy Paradis, Pierre Lapaquette, Frédéric Dalle
    Tissue Barriers.2019; 7(2): 1612661.     CrossRef
  • Intestinal microbiota contributes to altered glucose metabolism in simulated microgravity mouse model
    Yifan Wang, Weijia Zhao, Junxiu Shi, Jiachi Wang, Jie Hao, Xuewen Pang, Xiaojun Huang, Xiaoping Chen, Yongzhi Li, Rong Jin, Qing Ge
    The FASEB Journal.2019; 33(9): 10140.     CrossRef
  • Microglia immunometabolism: From metabolic disorders to single cell metabolism
    Rosa C. Paolicelli, Stefano Angiari
    Seminars in Cell & Developmental Biology.2019; 94: 129.     CrossRef
  • Lactobacillus reuteri improves gut barrier function and affects diurnal variation of the gut microbiota in mice fed a high-fat diet
    Shuangqi Li, Ce Qi, Hualing Zhu, Renqiang Yu, Chunliang Xie, Yuande Peng, Shou-Wei Yin, Jianhui Fan, Suqing Zhao, Jin Sun
    Food & Function.2019; 10(8): 4705.     CrossRef
  • Gut Microbiota and Obesity: A Role for Probiotics
    Ludovico Abenavoli, Emidio Scarpellini, Carmela Colica, Luigi Boccuto, Bahare Salehi, Javad Sharifi-Rad, Vincenzo Aiello, Barbara Romano, Antonino De Lorenzo, Angelo A. Izzo, Raffaele Capasso
    Nutrients.2019; 11(11): 2690.     CrossRef
  • Microbial Metabolites Determine Host Health and the Status of Some Diseases
    Panida Sittipo, Jae-won Shim, Yun Lee
    International Journal of Molecular Sciences.2019; 20(21): 5296.     CrossRef
  • Dietary Fat-Accelerating Leptin Signaling Promotes Protumorigenic Gastric Environment in Mice
    Seiya Arita, Takumi Ogawa, Yuta Murakami, Yuta Kinoshita, Masaharu Okazaki, Kyoko Inagaki-Ohara
    Nutrients.2019; 11(9): 2127.     CrossRef
  • Health‐promoting effects of dietary polysaccharide extracted from Dendrobium aphyllum on mice colon, including microbiota and immune modulation
    Huifan Liu, Hui Wu, Qin Wang
    International Journal of Food Science & Technology.2019; 54(5): 1684.     CrossRef
  • The Role of Gut Microbiota in Intestinal Inflammation with Respect to Diet and Extrinsic Stressors
    Stefani Lobionda, Panida Sittipo, Hyog Young Kwon, Yun Kyung Lee
    Microorganisms.2019; 7(8): 271.     CrossRef
  • The Protective Role of Bacteroides fragilis in a Murine Model of Colitis-Associated Colorectal Cancer
    Yun Kyung Lee, Parpi Mehrabian, Silva Boyajian, Wei-Li Wu, Jane Selicha, Steven Vonderfecht, Sarkis K. Mazmanian, Julia Oh
    mSphere.2018;[Epub]     CrossRef
  • Prevalence of Atopy following Mass Drug Administration with Albendazole: A Study in School Children on Flores Island, Indonesia
    Steven L. Staal, Sarika K.L. Hogendoorn, Sophie A. Voets, Rebecca C. Tepper, Mirte Veenstra, Ivo I. de Vos, Koen C. van Son, Jari K. Gool, Antonia C. Paramitha, Kevin Aristyo, Ardy Wildan, Chici Pratiwi, Ronald van Ree, Maria Yazdanbakhsh, Taniawati Supal
    International Archives of Allergy and Immunology.2018; 177(3): 192.     CrossRef
  • Gut microbiomes and their metabolites shape human and animal health
    Woojun Park
    Journal of Microbiology.2018; 56(3): 151.     CrossRef
  • Toll-Like Receptor 2-Mediated Suppression of Colorectal Cancer Pathogenesis by Polysaccharide A From Bacteroides fragilis
    Panida Sittipo, Stefani Lobionda, Kyungchul Choi, Ita Novita Sari, Hyog Young Kwon, Yun Kyung Lee
    Frontiers in Microbiology.2018;[Epub]     CrossRef
MINIREVIEW] Indole: a signaling molecule or a mere metabolic byproduct that alters bacterial physiology at a high concentration?
Jisun Kim , Woojun Park
J. Microbiol. 2015;53(7):421-428.   Published online June 27, 2015
DOI: https://doi.org/10.1007/s12275-015-5273-3
  • 481 View
  • 0 Download
  • 107 Crossref
AbstractAbstract
Indole is an organic compound that is widespread in microbial communities inhabiting diverse habitats, like the soil environment and human intestines. Measurement of indole production is a traditional method for the identification of microbial species. Escherichia coli can produce millimolar concentrations of indole in the stationary growth phase under nutrient-rich conditions. Indole has received considerable attention because of its remarkable effects on various biological functions of the microbial communities, for example, biofilm formation, motility, virulence, plasmid stability, and antibiotic resistance. Indole may function as an intercellular signaling molecule, like a quorum-sensing signal. Nevertheless, a receptor system for indole and the function of this compound in coordinated behavior of a microbial population (which are requirements for a true signaling molecule) have not yet been confirmed. Recent findings suggest that a long-known quorum-sensing regulator, E. coli’s SdiA, cannot recognize indole and that this compound may simply cause membrane disruption and energy reduction, which can lead to various changes in bacterial physiology including unstable folding of a quorum-sensing regulator. Indole appears to be responsible for acquisition of antibiotic resistance via the formation of persister cells and activation of an exporter. This review highlights and summarizes the current knowledge about indole as a multitrophic molecule among bacteria, together with recently identified new avenues of research.

Citations

Citations to this article as recorded by  
  • A UHPLC-QE-MS-based metabolomics approach for the evaluation of fermented lipase by an engineered Escherichia coli
    Jun Zhang, Ying Zhang, Wen Luo, Zhiyuan Wang, Pengmei Lv, Zhongming Wang
    Preparative Biochemistry & Biotechnology.2025; 55(4): 457.     CrossRef
  • Metabolic byproduct utilization and the evolution of mutually beneficial cooperation in Escherichia coli
    Nan Ye, Beibei Hou, Jianxiao Song, Derek W Dunn, Zhanshan (Sam) Ma, Rui-Wu Wang, Lutz Fromhage, Hélène Morlon
    Evolution.2025; 79(5): 779.     CrossRef
  • Modulation of virulence and metabolic profiles in Klebsiella pneumoniae under indole-mediated stress response
    Xueyao Fang, Yanhui Chen, Longhua Hu, Shumin Gu, Junqi Zhu, Yaping Hang, Xingwei Cao, Yanping Xiao, Hong Luo, Chuwen Zhao, Lianhua Xiao, Qiaoshi Zhong
    Frontiers in Cellular and Infection Microbiology.2025;[Epub]     CrossRef
  • Indole derivatives display antimicrobial and antibiofilm effects against extensively drug-resistant Acinetobacter baumannii
    Junwei Li, Lulin Xie, Fei Lin, Baodong Ling, Brian Conlon
    Microbiology Spectrum.2025;[Epub]     CrossRef
  • Cross-talk between signal transduction systems and metabolic networks in antibiotic resistance and tolerance
    Shuji Gao, Baobao Liu, Shuo Yuan, Yingying Quan, Shenao Song, Wenjie Jin, Yuxin Wang, Yang Wang
    International Journal of Antimicrobial Agents.2025; 65(5): 107479.     CrossRef
  • The role of host plants in driving pathogen susceptibility in insects through chemicals, immune responses and microbiota
    Ehsan Sanaei, Jacobus C. de Roode
    Biological Reviews.2025; 100(3): 1347.     CrossRef
  • Indole-mediated reconfiguration of soil microbial consortia in response to microplastic pollution
    Tongyi Yang, Ruiqian Yuan, Xinjue Zou, Miaomiao Dai, Xiaona Dong, Haifeng Chen, Zechong Guo, Huazhe Jiao, Yixuan Yang
    Journal of Environmental Chemical Engineering.2025; 13(2): 115961.     CrossRef
  • A Methyl-Accepting Chemotaxis Protein MCP-5685 Associated with Indole Synthesis in Pantoea ananatis YJ76 Influences its Plant Growth-Promoting Potential and Adaptability to Stress Conditions
    Haotian Zhang, Xinyi Zhou, Xueying Wang, Jing Zheng, Yongjun Feng
    Current Microbiology.2025;[Epub]     CrossRef
  • Core gut microbiota in rabbit: opportunities to strengthen the intestinal barrier
    Sylvie Combes, Laurent Cauquil, Mathilde Rumeau, Charlotte Paës, Géraldine Pascal, Cláudia M. Vicente, Martin Beaumont, Christelle Knudsen
    World Rabbit Science.2025; 33(2): 103.     CrossRef
  • Indole modulates lipoteichoic acid-induced inflammatory response in duck intestinal epithelial cells
    Wei Yan, Aiwen Zhu, Bingqian Zhong, Qiwei Chen
    Microbial Pathogenesis.2025; 209: 108030.     CrossRef
  • Integrative multi-omics analysis uncovers tumor-immune-gut axis influencing immunotherapy outcomes in ovarian cancer
    Spencer R. Rosario, Mark D. Long, Shanmuga Chilakapati, Eduardo Cortes Gomez, Sebastiano Battaglia, Prashant K. Singh, Jianmin Wang, Katy Wang, Kristopher Attwood, Suzanne M. Hess, AJ Robert McGray, Kunle Odunsi, Brahm H. Segal, Gyorgy Paragh, Song Liu, J
    Nature Communications.2024;[Epub]     CrossRef
  • Integration of metagenome and metabolome analysis reveals the correlation of gut microbiota, oxidative stress, and inflammation in Coilia nasus under air exposure stress and salinity mitigation
    Yuqian Liu, Jun Gao, Zhijuan Nie, Jiayu Wang, Yi Sun, Gangchun Xu
    Comparative Biochemistry and Physiology Part D: Genomics and Proteomics.2024; 49: 101175.     CrossRef
  • Auxin-mediated regulation of susceptibility to toxic metabolites, c-di-GMP levels, and phage infection in the rhizobacterium Serratia plymuthica
    Miriam Rico-Jiménez, Zulema Udaondo, Tino Krell, Miguel A. Matilla, Gilles P. van Wezel
    mSystems.2024;[Epub]     CrossRef
  • Indole May Help the Horizontal Transmission of Antibiotic Resistance Genes in E. coli Under Subinhibitory Concentrations of Cefotaxime Stress
    Weiqi Dong, Panpan Du, Ruisen Huang, Shuoyan Lv, Hong Chen, Songlei Guan, Sushil Nagar
    Cellular Microbiology.2024;[Epub]     CrossRef
  • Exogenous indole modulates several CpxRA-mediated virulence-related parameters of Edwardsiella piscicida in vitro
    Yin Gou, Qingjian Fang, Hanjie Gu, Aijun Tian, Jun Li, Yan Wang, Yonghua Hu
    Marine Life Science & Technology.2024; 6(4): 665.     CrossRef
  • Multi-wavelength Fluorescence Monitoring of Faecal Contamination in Waters: A Laboratory-based Quantification
    Kane L. Offenbaume, Edoardo Bertone, Dechao Chen, Qin Li, Helen Stratton, Rodney A. Stewart
    Environmental Processes.2024;[Epub]     CrossRef
  • Indole signaling enhances biofilm formation and quorum sensing in sequencing biofilm batch reactors
    Weize Wu, Jiawei Jing, Zhuo Chen, Xinyu Guo, Yuanyuan Qu
    Journal of Environmental Chemical Engineering.2024; 12(3): 112494.     CrossRef
  • Unraveling the Dynamics of Host–Microbiota Indole Metabolism: An Investigation of Indole, Indolin-2-one, Isatin, and 3-Hydroxyindolin-2-one
    Arnas Kunevičius, Mikas Sadauskas, Julija Raudytė, Rolandas Meškys, Aurelijus Burokas
    Molecules.2024; 29(5): 993.     CrossRef
  • Filters of automobile air conditioning systems as in-car source of exposure to infections and toxic moulds
    Małgorzata Gołofit-Szymczak, Angelina Wójcik-Fatla, Agata Stobnicka-Kupiec, Rafał L. Górny
    Environmental Science and Pollution Research.2023; 30(49): 108188.     CrossRef
  • Efflux pumps and microbial biofilm formation
    Mahdyeh Neghabi Hajiagha, Hossein Samadi Kafil
    Infection, Genetics and Evolution.2023; 112: 105459.     CrossRef
  • Indole inhibited the expression of csrA gene in Escherichia coli
    Jing Zheng, Guocai Zuo, Zhiguo Zhou, Zhenxia Shi, Huiying Guo, Zemin Sun, Yongjun Feng
    The Journal of General and Applied Microbiology.2023; 69(5): 239.     CrossRef
  • The Synthesis and Biological Evaluation of 2-(1H-Indol-3-yl)quinazolin-4(3H)-One Derivatives
    Elena Y. Mendogralo, Larisa Y. Nesterova, Ekaterina R. Nasibullina, Roman O. Shcherbakov, Alexander G. Tkachenko, Roman Y. Sidorov, Maxim A. Sukonnikov, Dmitry A. Skvortsov, Maxim G. Uchuskin
    Molecules.2023; 28(14): 5348.     CrossRef
  • Interbacterial Chemical Communication‐Triggered Nascent Proteomics
    Weibing Liu, Qi Tang, Liying Meng, Shufan Hu, De‐en Sun, Shan Li, Peng Dai, Xing Chen
    Angewandte Chemie.2023;[Epub]     CrossRef
  • The determination of the biological function of bacterial pink pigment and Fusarium chlamydosporum on alfalfa (Medicago sativa L.)
    Rong Huang, Hong Zhang, Haiyan Chen, Linxin He, Xiaoni Liu, Zhenfen Zhang
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Quorum sensing architecture network in Escherichia coli virulence and pathogenesis
    Celia Mayer, Anabela Borges, Saskia-Camille Flament-Simon, Manuel Simões
    FEMS Microbiology Reviews.2023;[Epub]     CrossRef
  • Stable isotope-assisted metabolite profiling reveals new insights into L-tryptophan chemotrophic metabolism of Rubrivivax benzoatilyticus
    Shabbir Ahmad, Mujahid Mohammed, Lakshmi Prasuna Mekala, Rai Anusha, Chintalapati Sasikala, Chintalapati Venkata Ramana
    World Journal of Microbiology and Biotechnology.2023;[Epub]     CrossRef
  • The recognition, control, and stress tolerance of bacterial persister cells
    Yoshimitsu Masuda
    Nippon Shokuhin Kagaku Kogaku Kaishi.2023; 70(8): 311.     CrossRef
  • Pseudomonas aeruginosa Resists Phage Infection via Eavesdropping on Indole Signaling
    Guanhua Xuan, Qin Dou, Jiuna Kong, Hong Lin, Jingxue Wang, Ayush Kumar
    Microbiology Spectrum.2023;[Epub]     CrossRef
  • Interbacterial Chemical Communication‐Triggered Nascent Proteomics
    Weibing Liu, Qi Tang, Liying Meng, Shufan Hu, De‐en Sun, Shan Li, Peng Dai, Xing Chen
    Angewandte Chemie International Edition.2023;[Epub]     CrossRef
  • A response regulator controls Acinetobacter baumannii virulence by acting as an indole receptor
    Binbin Cui, Quan Guo, Xia Li, Shihao Song, Mingfang Wang, Gerun Wang, Aixin Yan, Jianuan Zhou, Yinyue Deng, Marenda Wilson-Pham
    PNAS Nexus.2023;[Epub]     CrossRef
  • Characterization of the IAA-Producing and -Degrading Pseudomonas Strains Regulating Growth of the Common Duckweed (Lemna minor L.)
    Tatjana Popržen, Ivan Nikolić, Dijana Krstić-Milošević, Branka Uzelac, Milana Trifunović-Momčilov, Marija Marković, Olga Radulović
    International Journal of Molecular Sciences.2023; 24(24): 17207.     CrossRef
  • Metagenomic analysis reveals indole signaling effect on microbial community in sequencing batch reactors: Quorum sensing inhibition and antibiotic resistance enrichment
    Dai Chunxiao, Fang Ma, Weize Wu, Shuzhen Li, Jing Yang, Zhuo Chen, Shengyang Lian, Yuanyuan Qu
    Environmental Research.2023; 229: 115897.     CrossRef
  • Proteomic analysis reveals the adaptation of Vibrio splendidus to an iron deprivation condition
    Huirong Yang, Huimin Song, Jinxia Zhang, Weisheng Li, Qingxi Han, Weiwei Zhang
    Applied Microbiology and Biotechnology.2023; 107(7-8): 2533.     CrossRef
  • Bacterial quorum sensing orchestrates longitudinal interactions to shape microbiota assembly
    Ying Su, Ming-ying Xu, Ying Cui, Run-zhi Chen, Li-xiang Xie, Jing-xiang Zhang, Yong-qiu Chen, Tao Ding
    Microbiome.2023;[Epub]     CrossRef
  • Synthetic bacterial therapies for intestinal diseases based on quorum-sensing circuits
    Zhuoce Dang, Mengxue Gao, Lina Wang, Jiahao Wu, Yufei Guo, Zhixin Zhu, He Huang, Guangbo Kang
    Biotechnology Advances.2023; 65: 108142.     CrossRef
  • Gram-negative bacteria resist antimicrobial agents by a DzrR-mediated envelope stress response
    Zhibin Liang, Qiqi Lin, Qingwei Wang, Luhao Huang, Huidi Liu, Zurong Shi, Zining Cui, Xiaofan Zhou, Yong-Gui Gao, Jianuan Zhou, Lian-Hui Zhang, Yizhen Deng
    BMC Biology.2023;[Epub]     CrossRef
  • Production of indole and hydrogen sulfide by the oxygen-tolerant mutant strain Clostridium sp. Aeroto-AUH-JLC108 contributes to form a hypoxic microenvironment
    Yu-Xia Liu, Shi-Juan Dou, Meng Li, Xiu-Ling Wang
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Contribution of quorum sensing to virulence and antibiotic resistance in zoonotic bacteria
    Qingying Fan, Jing Zuo, Haikun Wang, Daniel Grenier, Li Yi, Yang Wang
    Biotechnology Advances.2022; 59: 107965.     CrossRef
  • Quorum Sensing Orchestrates Antibiotic Drug Resistance, Biofilm Formation, and Motility in Escherichia coli and Quorum Quenching Activities of Plant-derived Natural Products: A Review
    Kevin Smith Puno Cabuhat, Llewelyn Sotto Moron-Espiritu
    Journal of Pure and Applied Microbiology.2022; 16(3): 1538.     CrossRef
  • Bacterial survivors: evaluating the mechanisms of antibiotic persistence
    Xiaoyi Shi, Ashraf Zarkan
    Microbiology .2022;[Epub]     CrossRef
  • Characteristics of Bacterial Persister and Its Control
    Yoshimitsu MASUDA
    KAGAKU TO SEIBUTSU.2022; 60(5): 232.     CrossRef
  • Quorum Sensing: A New Perspective to Reveal the Interaction Between Gut Microbiota and Host
    Lei Yang, Tian-jie Yuan, Yue Wan, Wen-wen Li, Chen Liu, Shu Jiang, Jin-ao Duan
    Future Microbiology.2022; 17(4): 293.     CrossRef
  • Targeted and non-targeted analysis of young-of-year smallmouth bass using comprehensive two-dimensional gas chromatography coupled with time-of-flight mass spectrometry
    Paige Teehan, Megan K. Schall, Vicki S. Blazer, Frank L. Dorman
    Science of The Total Environment.2022; 806: 150378.     CrossRef
  • Ribosome Hibernation: Molecular Strategy of Bacterial Survival (Review)
    E. A. Khaova, N. M. Kashevarova, A. G. Tkachenko
    Applied Biochemistry and Microbiology.2022; 58(3): 213.     CrossRef
  • Indigo dyeing from Isatis tinctoria L.: From medieval to modern use
    Julia Mocquard, Anne-Cécile Le Lamer, Paul-Louis Fabre, Céline Mathieu, Clément Chastrette, Adrien Vitrai, Virginie Vandenbossche
    Dyes and Pigments.2022; 207: 110675.     CrossRef
  • Gut Microbiota-Derived Indole-3-Carboxylate Influences Mucosal Integrity and Immunity Through the Activation of the Aryl Hydrocarbon Receptors and Nutrient Transporters in Broiler Chickens Challenged With Eimeria maxima
    Inkyung Park, Hyoyoun Nam, Doyun Goo, Samiru S. Wickramasuriya, Noah Zimmerman, Alexandra H. Smith, Thomas G. Rehberger, Hyun S. Lillehoj
    Frontiers in Immunology.2022;[Epub]     CrossRef
  • Investigation of indole biodegradation by Cupriavidus sp. strain IDO with emphases on downstream biotransformation and indigo production
    Chunxiao Dai, Fang Ma, Qiao Ma, Jing Yang, Yan Li, Bingyu Yang, Yuanyuan Qu
    Environmental Science and Pollution Research.2022; 29(6): 8369.     CrossRef
  • Production of Indole and Indole-Related Compounds by the Intestinal Microbiota and Consequences for the Host: The Good, the Bad, and the Ugly
    Naouel Tennoune, Mireille Andriamihaja, François Blachier
    Microorganisms.2022; 10(5): 930.     CrossRef
  • Multidrug‐Resistant Biofilm, Quorum Sensing, Quorum Quenching, and Antibacterial Activities of Indole Derivatives as Potential Eradication Approaches
    Ayodele T. Odularu, Anthony J. Afolayan, Alexander P. Sadimenko, Peter A. Ajibade, Johannes Z. Mbese, Maria Bayliak
    BioMed Research International.2022;[Epub]     CrossRef
  • Indole Facilitates Antimicrobial Uptake in Bacteria
    Tong Wu, Michael J. Wilhelm, Yujie Li, Jianqiang Ma, Hai-Lung Dai
    ACS Infectious Diseases.2022; 8(6): 1124.     CrossRef
  • Mechanisms of Inhibition of Quorum Sensing as an Alternative for the Control of E. coli and Salmonella
    Esmeralda Escobar-Muciño, Margarita M. P. Arenas-Hernández, M. Lorena Luna-Guevara
    Microorganisms.2022; 10(5): 884.     CrossRef
  • Role of alarmone (p)ppGpp in the regulation of indole formation depending on glucose content in Escherichia coli
    N. M. Kashevarova, A. V. Akhova, E. A. Khaova, A. G. Tkachenko
    Acta Biomedica Scientifica.2022; 7(3): 162.     CrossRef
  • Bacterial Long-Range Warfare: Aerial Killing of Legionella pneumophila by Pseudomonas fluorescens
    Marie-Hélène Corre, Anne Mercier, Mathilde Bouteiller, Alix Khalil, Christophe Ginevra, Ségolène Depayras, Charly Dupont, Meg Rouxel, Mathias Gallique, Laettitia Grac, Sophie Jarraud, David Giron, Annabelle Merieau, Jean-Marc Berjeaud, Julien Verdon, Joan
    Microbiology Spectrum.2021;[Epub]     CrossRef
  • Anti-biofilm ability of garlic extract on Pantoea agglomerans and application to biosand filter
    Seul Jin, Ji Hun Park, Woong-Suk Yang, Jae-Yong Lee, Cher-Won Hwang
    Desalination and Water Treatment.2021; 228: 84.     CrossRef
  • A high‐throughput genetically directed protein crosslinking analysis reveals the physiological relevance of the ATP synthase ‘inserted’ state
    Yang Liu, Jiayu Yu, Mengyuan Wang, Qingfang Zeng, Xinmiao Fu, Zengyi Chang
    The FEBS Journal.2021; 288(9): 2989.     CrossRef
  • The Microbiota and the Gut–Brain Axis in Controlling Food Intake and Energy Homeostasis
    Marina Romaní-Pérez, Clara Bullich-Vilarrubias, Inmaculada López-Almela, Rebeca Liébana-García, Marta Olivares, Yolanda Sanz
    International Journal of Molecular Sciences.2021; 22(11): 5830.     CrossRef
  • The Effects of Indole on Intracellular Polyamine Content and Antibiotic Susceptibility of Escherichia coli
    L. Y. Nesterova, A. V. Akhova, A. G. Tkachenko
    Moscow University Biological Sciences Bulletin.2021; 76(4): 196.     CrossRef
  • Potential of Herbaspirillum and Azospirillum Consortium to Promote Growth of Perennial Ryegrass under Water Deficit
    Sandra Cortés-Patiño, Christian Vargas, Fagua Álvarez-Flórez, Ruth Bonilla, German Estrada-Bonilla
    Microorganisms.2021; 9(1): 91.     CrossRef
  • New Insights Into Gut-Bacteria-Derived Indole and Its Derivatives in Intestinal and Liver Diseases
    Xiaojing Li, Binbin Zhang, Yiyang Hu, Yu Zhao
    Frontiers in Pharmacology.2021;[Epub]     CrossRef
  • The cytidine repressor regulates the survival of Pantoea agglomerans YS19 under oxidative stress and sulfur starvation conditions
    Jiajia Yu, Mengqi Jia, Yongjun Feng
    The Journal of General and Applied Microbiology.2021; 67(2): 59.     CrossRef
  • The classification of bacterial survival strategies in the presence of antimicrobials
    Igor V. Chebotar’, Marina A. Emelyanova, Julia A. Bocharova, Nikolay A. Mayansky, Elena E. Kopantseva, Vladimir M. Mikhailovich
    Microbial Pathogenesis.2021; 155: 104901.     CrossRef
  • Role of Toxin-Antitoxin-Regulated Persister Population and Indole in Bacterial Heat Tolerance
    Yoshimitsu Masuda, Erika Sakamoto, Ken-ichi Honjoh, Takahisa Miyamoto, Danilo Ercolini
    Applied and Environmental Microbiology.2020;[Epub]     CrossRef
  • Bioconversion of Biologically Active Indole Derivatives with Indole-3-Acetic Acid-Degrading Enzymes from Caballeronia glathei DSM50014
    Mikas Sadauskas, Roberta Statkevičiūtė, Justas Vaitekūnas, Rolandas Meškys
    Biomolecules.2020; 10(4): 663.     CrossRef
  • Antibiofilm and Antivirulence Properties of Indoles Against Serratia marcescens
    Sivasamy Sethupathy, Ezhaveni Sathiyamoorthi, Yong-Guy Kim, Jin-Hyung Lee, Jintae Lee
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Local and Universal Action: The Paradoxes of Indole Signalling in Bacteria
    Ashraf Zarkan, Junyan Liu, Marta Matuszewska, Hannah Gaimster, David K. Summers
    Trends in Microbiology.2020; 28(7): 566.     CrossRef
  • Experimental investigation into indole production using passaging of E. coli and B. subtilis along with unstructured modeling and parameter estimation using dynamic optimization: An integrated framework
    Ranjana Singh, Surbhi Sharma, Venkatesh V. Kareenhalli, Lopamudra Giri, Kishalay Mitra
    Biochemical Engineering Journal.2020; 163: 107743.     CrossRef
  • Genome Insights of the Plant-Growth Promoting Bacterium Cronobacter muytjensii JZ38 With Volatile-Mediated Antagonistic Activity Against Phytophthora infestans
    Abdul Aziz Eida, Salim Bougouffa, Floriane L’Haridon, Intikhab Alam, Laure Weisskopf, Vladimir B. Bajic, Maged M. Saad, Heribert Hirt
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Rich Repertoire of Quorum Sensing Protein Coding Sequences in CPR and DPANN Associated with Interspecies and Interkingdom Communication
    Charles Bernard, Romain Lannes, Yanyan Li, Éric Bapteste, Philippe Lopez, Robert G. Beiko
    mSystems.2020;[Epub]     CrossRef
  • Modified QuEChERS extraction for the analysis of young-of-year smallmouth bass using GC × GC-TOFMS
    Paige Teehan, Megan K. Schall, Vicki S. Blazer, Beate Gruber, Frank L. Dorman
    Analytical Methods.2020; 12(29): 3697.     CrossRef
  • Indole Pulse Signalling Regulates the Cytoplasmic pH of E. coli in a Memory-Like Manner
    Ashraf Zarkan, Santiago Caño-Muñiz, Jinbo Zhu, Kareem Al Nahas, Jehangir Cama, Ulrich F. Keyser, David K. Summers
    Scientific Reports.2019;[Epub]     CrossRef
  • Indole Inhibits ToxR Regulon Expression in Vibrio cholerae
    Mondraya F. Howard, X. Renee Bina, James E. Bina, Shelley M. Payne
    Infection and Immunity.2019;[Epub]     CrossRef
  • Surface-enhanced Raman scattering (SERS) imaging of bioactive metabolites in mixed bacterial populations
    Sarah De Marchi, Gustavo Bodelón, Lorena Vázquez-Iglesias, Luis M. Liz-Marzán, Jorge Pérez-Juste, Isabel Pastoriza-Santos
    Applied Materials Today.2019; 14: 207.     CrossRef
  • Differential Susceptibility of Catheter Biomaterials to Biofilm-Associated Infections and Their Remedy by Drug-Encapsulated Eudragit RL100 Nanoparticles
    Vivek Kumar Pandey, Kumar Rohit Srivastava, Gufran Ajmal, Vijay Kumar Thakur, Vijai Kumar Gupta, Siddh Nath Upadhyay, Pradeep Kumar Mishra
    International Journal of Molecular Sciences.2019; 20(20): 5110.     CrossRef
  • Profiles of volatile indole emitted by Escherichia coli based on CDI-MS
    Qiaoshi Zhong, Feng Cheng, Juchao Liang, Xiaozhong Wang, Yanhui Chen, Xueyao Fang, Longhua Hu, Yaping Hang
    Scientific Reports.2019;[Epub]     CrossRef
  • Can Herbivore-Induced Volatiles Protect Plants by Increasing the Herbivores’ Susceptibility to Natural Pathogens?
    Laila Gasmi, María Martínez-Solís, Ada Frattini, Meng Ye, María Carmen Collado, Ted C. J. Turlings, Matthias Erb, Salvador Herrero, Alfons J. M. Stams
    Applied and Environmental Microbiology.2019;[Epub]     CrossRef
  • Indigoid dyes by group E monooxygenases: mechanism and biocatalysis
    Thomas Heine, Carolin Großmann, Sarah Hofmann, Dirk Tischler
    Biological Chemistry.2019; 400(7): 939.     CrossRef
  • Efficient colonization of the endophytes Herbaspirillum huttiense RCA24 and Enterobacter cloacae RCA25 influences the physiological parameters of Oryza sativa L. cv. Baldo rice
    Anna Andreozzi, Pilar Prieto, Jesús Mercado‐Blanco, Stefano Monaco, Elisa Zampieri, Silvia Romano, Gianpiero Valè, Roberto Defez, Carmen Bianco
    Environmental Microbiology.2019; 21(9): 3489.     CrossRef
  • Reprioritization of biofilm metabolism is associated with nutrient adaptation and long-term survival of Haemophilus influenzae
    Alistair Harrison, Rachael L. Hardison, Rachel M. Wallace, James Fitch, Derek R. Heimlich, Meghan O’ Bryan, Laura Dubois, Lisa St. John-Williams, Robert P. Sebra, Peter White, M. Arthur Moseley, J. Will Thompson, Sheryl S. Justice, Kevin M. Mason
    npj Biofilms and Microbiomes.2019;[Epub]     CrossRef
  • Necrobiome framework for bridging decomposition ecology of autotrophically and heterotrophically derived organic matter
    M. Eric Benbow, Philip S. Barton, Michael D. Ulyshen, James C. Beasley, Travis L. DeVault, Michael S. Strickland, Jeffery K. Tomberlin, Heather R. Jordan, Jennifer L. Pechal
    Ecological Monographs.2019;[Epub]     CrossRef
  • Biodegradation characteristics and genomic functional analysis of indole‐degrading bacterial strain Acinetobacter sp. JW
    Xuwang Zhang, Jiawei Jing, Lizhi Zhang, Zhaojian Song, Hao Zhou, Minghuo Wu, Yuanyuan Qu, Lifen Liu
    Journal of Chemical Technology & Biotechnology.2019; 94(4): 1114.     CrossRef
  • Synthesis of 1H-3-{4-[(3-Dimethylaminopropyl)aminomethyl]phenyl}-2-phenylindole and Evaluation of Its Antiprotozoal Activity
    Jean Guillon, Clotilde Boudot, Anita Cohen, Solène Savrimoutou, Sandra Rubio, Vittoria Milano, Mathieu Marchivie, Nadine Azas, Catherine Mullié, Pascal Sonnet, Bertrand Courtioux
    Molbank.2019; 2019(2): M1060.     CrossRef
  • Enantioselective α-Aminophosphonate Functionalization of Indole Ring through an Organocatalyzed Friedel–Crafts Reaction
    Aitor Maestro, Edorta Martinez de Marigorta, Francisco Palacios, Javier Vicario
    The Journal of Organic Chemistry.2019; 84(2): 1094.     CrossRef
  • Pantoea agglomeransYS19 poly(A) polymerase I gene possesses the indole-sensing sequence in the promoter region
    Jing Zheng, Qi Liu, Yifan Xia, Lijuan Bai, Yongjun Feng
    FEMS Microbiology Letters.2019;[Epub]     CrossRef
  • Phylogenetically diverse endophytic bacteria from desert plants induce transcriptional changes of tissue-specific ion transporters and salinity stress in Arabidopsis thaliana
    Abdul Aziz Eida, Hanin S. Alzubaidy, Axel de Zélicourt, Lukáš Synek, Wiam Alsharif, Feras F. Lafi, Heribert Hirt, Maged M. Saad
    Plant Science.2019; 280: 228.     CrossRef
  • The Two-Component System ZraPSR Is a Novel ESR that Contributes to Intrinsic Antibiotic Tolerance in Escherichia coli
    Kévin Rome, Céline Borde, Raleb Taher, Julien Cayron, Christian Lesterlin, Erwan Gueguen, Eve De Rosny, Agnès Rodrigue
    Journal of Molecular Biology.2018; 430(24): 4971.     CrossRef
  • N-dodecanoyl-homoserine lactone influences the levels of thiol and proteins related to oxidation-reduction process in Salmonella
    Felipe Alves de Almeida, Deisy Guimarães Carneiro, Tiago Antônio de Oliveira Mendes, Edvaldo Barros, Uelinton Manoel Pinto, Leandro Licursi de Oliveira, Maria Cristina Dantas Vanetti, Luis Caetano Martha Antunes
    PLOS ONE.2018; 13(10): e0204673.     CrossRef
  • Regulation of Escherichia coli Biofilm Formation (Review)
    J. A. Markova, E. V. Anganova, A. L. Turskaya, V. A. Bybin, E. D. Savilov
    Applied Biochemistry and Microbiology.2018; 54(1): 1.     CrossRef
  • Formate Promotes Shigella Intercellular Spread and Virulence Gene Expression
    Benjamin J. Koestler, Carolyn R. Fisher, Shelley M. Payne, Bonnie Bassler
    mBio.2018;[Epub]     CrossRef
  • Gut microbiota and transportation stress response affected by tryptophan supplementation in broiler chickens
    Alhassan U. Bello, Zulkifli Idrus, Goh Yong Meng, Elmutaz Atta Awad, Abdoreza Soleimani Farjam
    Italian Journal of Animal Science.2018; 17(1): 107.     CrossRef
  • Indole-Induced Activities of β-Lactamase and Efflux Pump Confer Ampicillin Resistance in Pseudomonas putida KT2440
    Jisun Kim, Bora Shin, Chulwoo Park, Woojun Park
    Frontiers in Microbiology.2017;[Epub]     CrossRef
  • Electrochemical reverse engineering: A systems-level tool to probe the redox-based molecular communication of biology
    Jinyang Li, Yi Liu, Eunkyoung Kim, John C. March, William E. Bentley, Gregory F. Payne
    Free Radical Biology and Medicine.2017; 105: 110.     CrossRef
  • Assessments of iodoindoles and abamectin as inducers of methuosis in pinewood nematode, Bursaphelenchus xylophilus
    Satish Kumar Rajasekharan, Jin-Hyung Lee, Vinothkannan Ravichandran, Jintae Lee
    Scientific Reports.2017;[Epub]     CrossRef
  • Expanding the Chemical Repertoire of the Endophyte Streptomyces albospinus RLe7 Reveals Amphotericin B as an Inducer of a Fungal Phenotype
    Fernanda Oliveira Chagas, Andrés Mauricio Caraballo-Rodríguez, Pieter C. Dorrestein, Mônica Tallarico Pupo
    Journal of Natural Products.2017; 80(5): 1302.     CrossRef
  • Lateral gene transfer of p‐cresol‐ and indole‐producing enzymes from environmental bacteria to Mastigamoeba balamuthi
    Eva Nývltová, Robert Šut'ák, Vojtěch Žárský, Karel Harant, Ivan Hrdý, Jan Tachezy
    Environmental Microbiology.2017; 19(3): 1091.     CrossRef
  • Indole at low concentration helps exponentially growing Escherichia coli survive at high temperature
    Junyan Liu, David Summers, Finbarr Hayes
    PLOS ONE.2017; 12(12): e0188853.     CrossRef
  • Antibiofilm agents: A new perspective for antimicrobial strategy
    Xi-Hui Li, Joon-Hee Lee
    Journal of Microbiology.2017; 55(10): 753.     CrossRef
  • Metabonomics of ageing – Towards understanding metabolism of a long and healthy life
    Francois-Pierre J. Martin, Ivan Montoliu, Martin Kussmann
    Mechanisms of Ageing and Development.2017; 165: 171.     CrossRef
  • An indole‐deficient Escherichia coli strain improves screening of cytochromes P450 for biotechnological applications
    Simone Brixius‐Anderko, Frank Hannemann, Michael Ringle, Yogan Khatri, Rita Bernhardt
    Biotechnology and Applied Biochemistry.2017; 64(3): 315.     CrossRef
  • Disarming the enemy: targeting bacterial toxins with small molecules
    Daniel Walker, Alejandro Huerta-Uribe, Andrew J. Roe
    Emerging Topics in Life Sciences.2017; 1(1): 31.     CrossRef
  • Mechanisms of bacterial persistence during stress and antibiotic exposure
    Alexander Harms, Etienne Maisonneuve, Kenn Gerdes
    Science.2016;[Epub]     CrossRef
  • Cascade Reactions of Nitrones and Allenes for the Synthesis of Indole Derivatives
    Laura L. Anderson, Michelle A. Kroc, Tyler W. Reidl, Jongwoo Son
    The Journal of Organic Chemistry.2016; 81(20): 9521.     CrossRef
  • Intrinsic relative nucleophilicity of indoles
    Eduardo Chamorro, Mario Duque-Noreña, Mar Ríos-Gutiérrez, Luis R. Domingo, Patricia Pérez
    Theoretical Chemistry Accounts.2016;[Epub]     CrossRef
  • Gut Bacteria and Hydrogen Sulfide: The New Old Players in Circulatory System Homeostasis
    Lenka Tomasova, Piotr Konopelski, Marcin Ufnal
    Molecules.2016; 21(11): 1558.     CrossRef
  • Products of gut-microbial tryptophan metabolism inhibit the steroid hormone-synthesizing cytochrome P450 11A1
    A. Mosa, A. Gerber, J. Neunzig, Rita Bernhardt
    Endocrine.2016; 53(2): 610.     CrossRef
  • Biofilm dispersion in Pseudomonas aeruginosa
    Soo-Kyoung Kim, Joon-Hee Lee
    Journal of Microbiology.2016; 54(2): 71.     CrossRef
  • Xenobiotic Receptor-Mediated Regulation of Intestinal Barrier Function and Innate Immunity
    Harmit S. Ranhotra, Kyle L. Flannigan, Martina Brave, Subhajit Mukherjee, Dana J. Lukin, Simon A. Hirota, Sridhar Mani
    Nuclear Receptor Research.2016;[Epub]     CrossRef
  • Is Fluorescence Valid to Monitor Removal of Protein Bound Uremic Solutes in Dialysis?
    Jürgen Arund, Merike Luman, Fredrik Uhlin, Risto Tanner, Ivo Fridolin, Sabato D'Auria
    PLOS ONE.2016; 11(5): e0156541.     CrossRef
Research Support, Non-U.S. Gov'ts
Host Species as a Strong Determinant of the Intestinal Microbiota of Fish Larvae
Xuemei Li , Yuhe Yu , Weisong Feng , Qingyun Yan , Yingchun Gong
J. Microbiol. 2012;50(1):29-37.   Published online February 27, 2012
DOI: https://doi.org/10.1007/s12275-012-1340-1
  • 380 View
  • 0 Download
  • 104 Crossref
AbstractAbstract PDF
We investigated the influence of host species on intestinal microbiota by comparing the gut bacterial community structure of four cohabitating freshwater fish larvae, silver carp, grass carp, bighead carp, and blunt snout bream, using denaturing gradient gel electrophoresis (DGGE) of the amplified 16S and 18S rRNA genes. Similarity clustering indicated that the intestinal microbiota derived from these four fish species could be divided into four groups based on 16S rRNA gene similarity, whereas the eukaryotic 18S rRNA genes showed no distinct groups. The water sample from the shared environment contained microbiota of an independent group as indicated by both 16S and 18S rRNA genes segments. The bacterial community structures were visualized using rank-abundance plots fitted with linear regression models.
Results
showed that the intestinal bacterial evenness was significantly different between species (P<0.05) and between species and the water sample (P<0.01). Thirty-five relatively dominant bands in DGGE patterns were sequenced and grouped into five major taxa: Proteobacteria (26), Actinobacteria (5), Bacteroidetes (1), Firmicutes (2), and Cyanobacterial (1). Six eukaryotes were detected by sequencing 18S rRNA genes segments. The present study suggests that the intestines of the four fish larvae, although reared in the same environment, contained distinct bacterial populations, while intestinal eukaryotic microorganisms were almost identical.

Citations

Citations to this article as recorded by  
  • Comparative metagenomics of tropical reef fishes show conserved core gut functions across hosts and diets with diet-related functional gene enrichments
    Derek G. Wu, Cassandra R. Harris, Katie M. Kalis, Malique Bowen, Jennifer F. Biddle, Ibrahim F. Farag, Knut Rudi
    Applied and Environmental Microbiology.2025;[Epub]     CrossRef
  • Intestinal Microeukaryotes in Fish: A Concise Review of an Underexplored Component of the Microbiota
    Jesús Salvador Olivier Guirado-Flores, Estefanía Garibay-Valdez, Diana Medina-Félix, Francisco Vargas-Albores, Luis Rafael Martínez-Córdova, Yuniel Mendez-Martínez, Marcel Martínez-Porchas
    Microbiology Research.2025; 16(7): 158.     CrossRef
  • Gut Microbial Composition of Cyprinella lutrensis (Red Shiner) and Notropis stramineus (Sand Shiner): Insights from Wild Fish Populations
    Krista Starr, Federica Montesanto, Esther Perisho, Nirosh Aluthge, Mark Pegg, Samodha C. Fernando
    Microbial Ecology.2024;[Epub]     CrossRef
  • Ginger polysaccharide alleviates the effects of acute exposure to carbonate in crucian carp (Carassius auratus) by regulating immunity, intestinal microbiota, and intestinal metabolism
    Xianwei Meng, Liang Luo, Zhigang Zhao, Shihui Wang, Rui Zhang, Kun Guo
    Ecotoxicology and Environmental Safety.2024; 273: 116127.     CrossRef
  • Identification of the regulatory roles of water qualities on the spatio-temporal dynamics of microbiota communities in the water and fish guts in the Heilongjiang River
    Hongyu Jin, Lei Li, Wanqiao Lu, Zepeng Zhang, Yue Xing, Di Wu
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • Microbiomes of Tilapia Culture Systems: Composition, Affecting Factors, and Future Perspectives
    Jonabel Huavas, Jasmine Heyse, Ruben Props, Jérôme Delamare-Deboutteville, Colin Shelley, Christyn Bailey
    Aquaculture Research.2024;[Epub]     CrossRef
  • Regulation of lipid metabolism by gut microbiota in aquatic animals
    Shangong Wu, Meijing Pan, Ziye Zan, Ivan Jakovlić, Weishan Zhao, Hong Zou, Einar Ringø, Guitang Wang
    Reviews in Aquaculture.2024; 16(1): 34.     CrossRef
  • High-altitude Adaptation of Xizang Plateau Frogs, <italic>Nanorana parkeri</italic> from a Perspective of the Gut Microbiome
    Xuejing ZHANG, Yonggang NIU, Shengkang MEN, Xiaolong TANG, Kenneth B. STOREY, Qiang CHEN
    Asian Herpetological Research.2024; 15(4): 214.     CrossRef
  • Effects of salinity stress on the growth performance, health status, and intestinal microbiota of juvenile Micropterus salmoides
    Shukui Sun, Cuiping Gong, Chaoyue Deng, Haoran Yu, Da Zheng, Lei Wang, Junlong Sun, Feibiao Song, Jian Luo
    Aquaculture.2023; 576: 739888.     CrossRef
  • Responses of the gastrointestinal microbiota to the protein metabolism of pond-cultured Japanese flounder (Paralichthys olivaceus)
    Yan Jiang, Jun Wang, Lin Lin, Yongjiang Xu, Aijun Cui, Kaijie Wang, Xuezhou Liu, Bin Wang
    Frontiers in Marine Science.2023;[Epub]     CrossRef
  • Effects of plant-based proteins and handling stress on intestinal mucus microbiota in rainbow trout
    Marvin Suhr, Finn-Thorbjörn Fichtner-Grabowski, Henrike Seibel, Corinna Bang, Andre Franke, Carsten Schulz, Stéphanie C. Hornburg
    Scientific Reports.2023;[Epub]     CrossRef
  • Gut microbiota, host genetics and phenotypes in aquatic animals: A review
    Quanxin Gao, Peimin Liu, Yang Li, Dawei Song, Wei Long, Zefeng Wang, Shaokui Yi, Linhua Jiang
    Aquaculture Reports.2023; 31: 101648.     CrossRef
  • Povidone iodine exposure alters the immune response and microbiota of the gill and skin in koi carp, Cyprinus carpio
    R. Zhang, G.T. Wu, J.Y. Zhu, X.W. Wang, L.L. Liu, H.J. Li, H. Zhu
    Aquaculture.2023; 563: 738926.     CrossRef
  • Gut microbiota of an Amazonian fish in a heterogeneous riverscape: integrating genotype, environment, and parasitic infections
    Nicolas Leroux, Francois-Etienne Sylvain, Aleicia Holland, Adalberto Luis Val, Nicolas Derome, John M. Chaston, Mikhail Solovyev
    Microbiology Spectrum.2023;[Epub]     CrossRef
  • Trophic level and proteobacteria abundance drive antibiotic resistance levels in fish from coastal New England
    Benjamin J. Korry, Peter Belenky
    Animal Microbiome.2023;[Epub]     CrossRef
  • Gut microbiota changes in Hexagrammos otakii during development and association with diets based on metagenomics sequencing
    Ying Fan, Youhong Wang, Li Li, Xiaolu Wang, Xiaoqing Yu, La Xu, Shuxian Wang, Fawen Hu, Chunlei Gai, Jing Diao, Haibin Ye, Fusheng Hou, Xintian Liu
    Aquaculture Reports.2023; 33: 101881.     CrossRef
  • Partial Substitution of Fish Meal with Soy Protein Concentrate on Growth, Liver Health, Intestinal Morphology, and Microbiota in Juvenile Large Yellow Croaker (Larimichthys crocea)
    Xuexi Wang, Hongjie Luo, Dejuan Wang, Yunzong Zheng, Wenbo Zhu, Weini Zhang, Zhengbang Chen, Xinhua Chen, Jianchun Shao, Yanjiao Zhang
    Aquaculture Nutrition.2023; 2023: 1.     CrossRef
  • Characterization of Host-Associated Microbiota and Isolation of Antagonistic Bacteria from Greater Amberjack (Seriola dumerili, Risso, 1810) Larvae
    Vasiliki Paralika, Fotini Kokou, Stelios Karapanagiotis, Pavlos Makridis
    Microorganisms.2023; 11(8): 1889.     CrossRef
  • The Active Microbiota of the Eggs and the Nauplii of the Pacific Blue Shrimp Litopenaeus stylirostris Partially Shaped by a Potential Vertical Transmission
    Carolane Giraud, Nolwenn Callac, Viviane Boulo, Jean-Sébastien Lam, Dominique Pham, Nazha Selmaoui-Folcher, Nelly Wabete
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Supplementing artemisinin positively influences growth, antioxidant capacity, immune response, gut health and disease resistance against Vibrio parahaemolyticus in Litopenaeus vannamei fed cottonseed protein concentrate meal diets
    Hongyu Liu, Guofeng Chen, Lixian Li, Zhixuan Lin, Beiping Tan, Xiaohui Dong, Qihui Yang, Shuyan Chi, Shuang Zhang, Xiaoqiu Zhou
    Fish & Shellfish Immunology.2022; 131: 105.     CrossRef
  • Does Exposure of Broodstock to Dietary Soybean Meal Affect Its Utilization in the Offspring of Zebrafish (Danio rerio)?
    Karolina Kwasek, Samuel Patula, Michal Wojno, Frank Oliaro, Chrissy Cabay, Lee J. Pinnell
    Animals.2022; 12(12): 1475.     CrossRef
  • Characterization and Dynamics of the Gut Microbiota in Rice Fishes at Different Developmental Stages in Rice-Fish Coculture Systems
    Ling Tao, Jie Chai, Hongyi Liu, Wenhao Huang, Yan Zou, Mengling Wu, Buqing Peng, Qiong Wang, Keyi Tang
    Microorganisms.2022; 10(12): 2373.     CrossRef
  • Dietary supplementation with microalgae enhances the zebrafish growth performance by modulating immune status and gut microbiota
    Ke Ma, Siwei Chen, Yue Wu, Yiting Ma, Haochen Qiao, Jianhua Fan, Haizhen Wu
    Applied Microbiology and Biotechnology.2022; 106(2): 773.     CrossRef
  • Potential Role of Gastrointestinal Microbiota in Growth Regulation of Yellowtail Kingfish Seriola lalandi in Different Stocking Densities
    Yan Jiang, Chaoyong Yu, Yongjiang Xu, Xuezhou Liu, Aijun Cui, Bin Wang, Heting Zhou
    Fishes.2022; 7(4): 154.     CrossRef
  • Starvation and refeeding influence the growth, biochemical index, intestinal microbiota, and transcriptomic profiles of golden pompano Trachinotus ovatus (Linnaeus 1758)
    Bo Liu, Hua-Yang Guo, Bao-Suo Liu, Nan Zhang, Jing-Wen Yang, Liang Guo, Shi-Gui Jiang, Dian-Chang Zhang
    Frontiers in Marine Science.2022;[Epub]     CrossRef
  • Comparative analysis of the gut microbiota in bighead carp under different culture patterns
    Mingkun Luo, Rui An, Jianjun Fu, Shunpeng Wan, Wenbin Zhu, Lanmei Wang, Zaijie Dong
    Journal of Applied Microbiology.2022; 132(2): 1357.     CrossRef
  • Northern pike (Esox lucius) young‐of‐year gut microbiota and associations with wetland nursery water microbial communities in the St. Lawrence River
    Benjamin D. Gallo, John M. Farrell, Brian F. Leydet
    Aquaculture, Fish and Fisheries.2022; 2(5): 384.     CrossRef
  • Gut microbiota differs between two cold-climate lizards distributed in thermally different regions
    Jun-Qiong Chen, Lu-Wen Zhang, Ru-Meng Zhao, Hai-Xia Wu, Long-Hui Lin, Peng Li, Hong Li, Yan-Fu Qu, Xiang Ji
    BMC Ecology and Evolution.2022;[Epub]     CrossRef
  • Bacteriome Structure, Function, and Probiotics in Fish Larviculture: The Good, the Bad, and the Gaps
    Nuno Borges, Tina Keller-Costa, Gracinda M.M. Sanches-Fernandes, António Louvado, Newton C.M. Gomes, Rodrigo Costa
    Annual Review of Animal Biosciences.2021; 9(1): 423.     CrossRef
  • Comparative analysis of bacterial communities of water and intestines of silver carp (Hypophthalmichthys molitrix) and bighead carp (H. nobilis) reared in aquaculture pond systems
    Liu-Jiang Meng, Yuan Zhang, Xin-Xin Li, Jun-Heng Liu, Bin Wen, Jian-Zhong Gao, Zai-Zhong Chen
    Aquaculture.2021; 534: 736334.     CrossRef
  • Food intake and its effect on the species and abundance of intestinal flora in colorectal cancer and healthy individuals
    Weitao Shen, Jiayu Sun, Zhiyang Li, Fen Yao, Kaihuang Lin, Xiaoyang Jiao
    The Korean Journal of Internal Medicine.2021; 36(3): 568.     CrossRef
  • Opportunities for microbiome research to enhance farmed freshwater fish quality and production
    Lara Parata, Jesmond Sammut, Suhelen Egan
    Reviews in Aquaculture.2021; 13(4): 2027.     CrossRef
  • A systematic review of advances in intestinal microflora of fish
    Chang Liu, Li-Ping Zhao, Yan-Qin Shen
    Fish Physiology and Biochemistry.2021; 47(6): 2041.     CrossRef
  • Gut Microbiota of Five Sympatrically Farmed Marine Fish Species in the Aegean Sea
    Eleni Nikouli, Alexandra Meziti, Evangelia Smeti, Efthimia Antonopoulou, Eleni Mente, Konstantinos Ar. Kormas
    Microbial Ecology.2021; 81(2): 460.     CrossRef
  • Physiological parameters and gut microbiome associated with different dietary lipid levels in hybrid yellow catfish (Tachysurus fulvidraco♀× Pseudobagrus vachellii♂)
    Haojun Zhu, Jun Qiang, Jie He, Yifan Tao, Jingwen Bao, Pao Xu
    Comparative Biochemistry and Physiology Part D: Genomics and Proteomics.2021; 37: 100777.     CrossRef
  • Host development overwhelms environmental dispersal in governing the ecological succession of zebrafish gut microbiota
    Fanshu Xiao, Wengen Zhu, Yuhe Yu, Zhili He, Bo Wu, Cheng Wang, Longfei Shu, Xinghao Li, Huaqun Yin, Jianjun Wang, Philippe Juneau, Xiafei Zheng, Yongjie Wu, Juan Li, Xiaojuan Chen, Dongwei Hou, Zhijian Huang, Jianguo He, Guohuan Xu, Liwei Xie, Jie Huang,
    npj Biofilms and Microbiomes.2021;[Epub]     CrossRef
  • NextGen molecular barcoding of larval grouper diet in an extensive green-water pond system
    Lachlan Peter Dennis, Kelli Anderson, Matthew Wylie, Vu Van In, Josephine Nocillado, Abigail Elizur
    Aquaculture.2021; 531: 735971.     CrossRef
  • Veteriner Sahada Güncel Mikrobiyota Kavramı
    Emre KÜLLÜK, Duygu DALGIN
    Etlik Veteriner Mikrobiyoloji Dergisi.2021; 32(1): 77.     CrossRef
  • Dynamic changes in microbial community structure in farming pond water and their effect on the intestinal microbial community profile in juvenile common carp (Cyprinus carpio L.)
    Xiaojun Jing, Shengyan Su, Chengfeng Zhang, Jian Zhu, Yiran Hou, Zhixun Li, Xingli Yang, Xiaolin Zhou, Xugang He, Brian Pelekelo Munganga, Yongkai Tang, Pao Xu
    Genomics.2021; 113(4): 2547.     CrossRef
  • Co-modulation of Liver Genes and Intestinal Microbiome of Largemouth Bass Larvae (Micropterus salmoides) During Weaning
    Liulan Zhao, Kuo He, Jie Luo, Junlong Sun, Lei Liao, Xiaohong Tang, Qiao Liu, Song Yang
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Use of next generation sequencing to compare simple habitat and species level differences in the gut microbiota of an invasive and native freshwater fish species
    Benjamin D. Gallo, John M. Farrell, Brian Leydet
    PeerJ.2020; 8: e10237.     CrossRef
  • Host-derived Probiotics for Finfish Aquaculture
    C M A Caipang, I Suharman, A L Avillanosa, V T Bargoyo
    IOP Conference Series: Earth and Environmental Science.2020; 430(1): 012026.     CrossRef
  • Physiological and gut microbiome changes associated with low dietary protein level in genetically improved farmed tilapia (GIFT,Oreochromis niloticus) determined by 16S rRNA sequence analysis
    Hao‐jun Zhu, Jun Qiang, Yi‐fan Tao, Tlou Kevin Ngoepe, Jing‐wen Bao, De‐ju Chen, Pao Xu
    MicrobiologyOpen.2020;[Epub]     CrossRef
  • Variations and Potential Factors of Gut Prokaryotic Microbiome During Spawning Migration in Coilia nasus
    Cong-ping Ying, Min Jiang, Lei You, Jin-hao Tan, Yan-ping Yang, Yin-ping Wang, Kai Liu
    Current Microbiology.2020; 77(10): 2802.     CrossRef
  • Fish Gut Microbiome: A Primer to an Emerging Discipline in the Fisheries Sciences
    Benjamin D Gallo, John M Farrell, Brian F Leydet
    Fisheries.2020; 45(5): 271.     CrossRef
  • Differences in the gut microbiota between Cercopithecinae and Colobinae in captivity
    Zongjin Huan, Yongfang Yao, Jianqiu Yu, Hongwei Chen, Meirong Li, Chaojun Yang, Bo Zhao, Qingyong Ni, Mingwang Zhang, Meng Xie, Huailiang Xu
    Journal of Microbiology.2020; 58(5): 367.     CrossRef
  • Comparative analysis of gut microbiota diversity in endangered, economical, and common freshwater mussels using 16S rRNA gene sequencing
    Xiongjun Liu, Yanling Cao, Shan Ouyang, Xiaoping Wu
    Ecology and Evolution.2020; 10(21): 12015.     CrossRef
  • Microbiota characteristics in Sebastes schlegelii intestine in early life stages
    Yan Jiang, Xuezhou Liu, Yongjiang Xu, Bao Shi, Bin Wang
    Journal of Oceanology and Limnology.2020; 38(1): 275.     CrossRef
  • Intestinal microbial profiling of grass carp (Ctenopharyngodon idellus) challenged with Aeromonas hydrophila
    Lei Zhou, Jian-fu Wei, Ke-tao Lin, Lian Gan, Jun-jie Wang, Ji-jia Sun, Xiao-peng Xu, Li Liu, Xian-de Huang
    Aquaculture.2020; 524: 735292.     CrossRef
  • Metagenomic Shotgun Analyses Reveal Complex Patterns of Intra- and Interspecific Variation in the Intestinal Microbiomes of Codfishes
    Even Sannes Riiser, Thomas H. A. Haverkamp, Srinidhi Varadharajan, Ørnulf Borgan, Kjetill S. Jakobsen, Sissel Jentoft, Bastiaan Star, Christopher A. Elkins
    Applied and Environmental Microbiology.2020;[Epub]     CrossRef
  • Spatiotemporal successions of shrimp gut microbial colonization: high consistency despite distinct species pool
    Jinbo Xiong, Lixia Xuan, Weina Yu, Jinyong Zhu, Qiongfen Qiu, Jiong Chen
    Environmental Microbiology.2019; 21(4): 1383.     CrossRef
  • Intestinal microbiota of salmonids and its changes upon introduction of soy proteins to fish feed
    Svetlana V. Kononova, Dmitry V. Zinchenko, Tatyana A. Muranova, Nataliya A. Belova, Anatoly I. Miroshnikov
    Aquaculture International.2019; 27(2): 475.     CrossRef
  • Shotgun metagenomics offers novel insights into taxonomic compositions, metabolic pathways and antibiotic resistance genes in fish gut microbiome
    Anuj Tyagi, Balwinder Singh, Naveen K. Billekallu Thammegowda, Niraj K. Singh
    Archives of Microbiology.2019; 201(3): 295.     CrossRef
  • Host selectively contributes to shaping intestinal microbiota of carnivorous and omnivorous fish
    Kristian Daly, Jennifer Kelly, Andrew W. Moran, Robert Bristow, Iain S. Young, Andrew R. Cossins, David Bravo, Soraya P. Shirazi-Beechey
    The Journal of General and Applied Microbiology.2019; 65(3): 129.     CrossRef
  • Succession of embryonic and the intestinal bacterial communities of Atlantic salmon (Salmo salar) reveals stage‐specific microbial signatures
    Jep Lokesh, Viswanath Kiron, Detmer Sipkema, Jorge M.O. Fernandes, Truls Moum
    MicrobiologyOpen.2019;[Epub]     CrossRef
  • Gut Microbiota and Energy Homeostasis in Fish
    Robyn Lisa Butt, Helene Volkoff
    Frontiers in Endocrinology.2019;[Epub]     CrossRef
  • Algae and Clay Water Additives Differentially Impact Survival and Microbial Community Structure in Sablefish (Anoplopoma fimbria) Rearing Tanks
    Melissa L. Pierce, Jonathan S. F. Lee, Emily Dodd, Rachel S. Poretsky
    Frontiers in Marine Science.2019;[Epub]     CrossRef
  • The effect of diet on the structure of gut bacterial community of sympatric pair of whitefishes (Coregonus lavaretus): one story more
    Mikhail M. Solovyev, Elena N. Kashinskaya, Nickolai A. Bochkarev, Karl B. Andree, Evgeniy Simonov
    PeerJ.2019; 7: e8005.     CrossRef
  • Comparison of the gut microbiota of Rana amurensis and Rana dybowskii under natural winter fasting conditions
    Qing Tong, Xiao-peng Du, Zong-fu Hu, Li-yong Cui, Jia Bie, Qian-zhen Zhang, Jian-hua Xiao, Yu Lin, Hong-bin Wang
    FEMS Microbiology Letters.2019;[Epub]     CrossRef
  • Screening of intestinal peristalsis-promoting probiotics based on a zebrafish model
    Youyou Lu, Junxue Zhang, Huaxi Yi, Zhe Zhang, Lanwei Zhang
    Food & Function.2019; 10(4): 2075.     CrossRef
  • Reduced fishmeal allowance with constant protein input for juvenile channel catfish Ictalurus punctatus
    Guang-Zhen Jiang, Zhuo-Qin Li, Hong-Yan Tian, Er-Teng Jia, Chao Xu, Wen-Bin Liu
    Aquaculture Nutrition.2019; 25(1): 154.     CrossRef
  • Intestinal Microbiota in Large Yellow Croaker, Larimichthys crocea, at Different Ages
    Na Wei, Chengcheng Wang, Shijun Xiao, Weiqing Huang, Mao Lin, Qingpi Yan, Ying Ma
    Journal of the World Aquaculture Society.2018; 49(1): 256.     CrossRef
  • Assessment of gut microbiota in different developmental stages of Malaysian Mahseer (Tor tambroides)
    Mohamad Zaimin Mohd Nosi, Sharifah Noor Emilia Syed Jamil Fadaak, Muhd Danish Daniel Muhammad, Shumpei Iehata
    Aquaculture Research.2018; 49(9): 2977.     CrossRef
  • Comparison of Channel Catfish and Blue Catfish Gut Microbiota Assemblages Shows Minimal Effects of Host Genetics on Microbial Structure and Inferred Function
    Jacob W. Bledsoe, Geoffrey C. Waldbieser, Kelly S. Swanson, Brian C. Peterson, Brian C. Small
    Frontiers in Microbiology.2018;[Epub]     CrossRef
  • Characterization of the gut microbiota in early life stages of pikeperch Sander lucioperca
    T. Dulski, Z. Zakęś, S. Ciesielski
    Journal of Fish Biology.2018; 92(1): 94.     CrossRef
  • Thermal processing of food reduces gut microbiota diversity of the host and triggers adaptation of the microbiota: evidence from two vertebrates
    Zhimin Zhang, Dapeng Li
    Microbiome.2018;[Epub]     CrossRef
  • Fish Gut Microbiome: Current Approaches and Future Perspectives
    Chandni Talwar, Shekhar Nagar, Rup Lal, Ram Krishan Negi
    Indian Journal of Microbiology.2018; 58(4): 397.     CrossRef
  • Progress in fish gastrointestinal microbiota research
    An R. Wang, Chao Ran, Einar Ringø, Zhi G. Zhou
    Reviews in Aquaculture.2018; 10(3): 626.     CrossRef
  • Intestinal microbiome and its potential functions in bighead carp (Aristichthys nobilis) under different feeding strategies
    Xuemei Li, Yongjiu Zhu, Einar Ringø, Xuge Wang, Jinling Gong, Deguo Yang
    PeerJ.2018; 6: e6000.     CrossRef
  • The variation profile of intestinal microbiota in blunt snout bream (Megalobrama amblycephala) during feeding habit transition
    Jin Wei, Xianwu Guo, Han Liu, Yuanyuan Chen, Weimin Wang
    BMC Microbiology.2018;[Epub]     CrossRef
  • Comparative analysis on microbial community associated with different gastrointestinal regions of wild northern snakehead Channa argus Cantor, 1842
    Shuyan Miao, Chenze Zhao, Jinyu Zhu, Mingzhu Pan
    Journal of Oceanology and Limnology.2018; 36(2): 450.     CrossRef
  • How Can We Define “Optimal Microbiota?”: A Comparative Review of Structure and Functions of Microbiota of Animals, Fish, and Plants in Agriculture
    Wakako Ikeda-Ohtsubo, Sylvia Brugman, Craig H. Warden, Johanna M. J. Rebel, Gert Folkerts, Corné M. J. Pieterse
    Frontiers in Nutrition.2018;[Epub]     CrossRef
  • Intestinal microbiota of healthy and unhealthy Atlantic salmon Salmo salar L. in a recirculating aquaculture system
    Chun Wang, Guoxiang Sun, Shuangshuang Li, Xian Li, Ying Liu
    Journal of Oceanology and Limnology.2018; 36(2): 414.     CrossRef
  • Age-Related Variations in Intestinal Microflora of Free-Range and Caged Hens
    Yizhe Cui, Qiuju Wang, Shengjun Liu, Rui Sun, Yaqiang Zhou, Yue Li
    Frontiers in Microbiology.2017;[Epub]     CrossRef
  • Changes in the gut microbiome of the Chinese mitten crab (Eriocheir sinensis) in response to White spot syndrome virus (WSSV) infection
    Z F Ding, M J Cao, X S Zhu, G H Xu, R L Wang
    Journal of Fish Diseases.2017; 40(11): 1561.     CrossRef
  • Comparative profiling of microbial community of three economically important fishes reared in sea cages under tropical offshore environment
    M.K. Rasheeda, Vijaya Raghavan Rangamaran, Senthilkumar Srinivasan, Sendhil Kumar Ramaiah, Rajaprabhu Gunasekaran, Santhanakumar Jaypal, Dharani Gopal, Kirubagaran Ramalingam
    Marine Genomics.2017; 34: 57.     CrossRef
  • High Spatial and Temporal Variations of Microbial Community along the Southern Catfish Gastrointestinal Tract: Insights into Dynamic Food Digestion
    Zhimin Zhang, Dapeng Li, Mohamed M. Refaey, Weitong Xu
    Frontiers in Microbiology.2017;[Epub]     CrossRef
  • Habitat and indigenous gut microbes contribute to the plasticity of gut microbiome in oriental river prawn during rapid environmental change
    Cheng-Yu Chen, Po-Cheng Chen, Francis Cheng-Hsuan Weng, Grace Tzun-Wen Shaw, Daryi Wang, Sanjay B Jadhao
    PLOS ONE.2017; 12(7): e0181427.     CrossRef
  • Multi-Omics Analysis Reveals a Correlation between the Host Phylogeny, Gut Microbiota and Metabolite Profiles in Cyprinid Fishes
    Tongtong Li, Meng Long, Huan Li, François-Joël Gatesoupe, Xujie Zhang, Qianqian Zhang, Dongyue Feng, Aihua Li
    Frontiers in Microbiology.2017;[Epub]     CrossRef
  • Coupling metagenomics with cultivation to select host-specific probiotic micro-organisms for subtropical aquaculture
    J. Cui, M. Xiao, M. Liu, Z. Wang, F. Liu, L. Guo, H. Meng, H. Zhang, J. Yang, D. Deng, S. Huang, Y. Ma, C. Liu
    Journal of Applied Microbiology.2017; 123(5): 1274.     CrossRef
  • Composition of Gut Microbiota in the Gibel Carp (Carassius auratus gibelio) Varies with Host Development
    Xinghao Li, Li Zhou, Yuhe Yu, Jiajia Ni, Wenjie Xu, Qingyun Yan
    Microbial Ecology.2017; 74(1): 239.     CrossRef
  • DNA extraction protocols may influence biodiversity detected in the intestinal microbiome: a case study from wild Prussian carp,Carassius gibelio
    Elena N. Kashinskaya, Karl B. Andree, Evgeniy P. Simonov, Mikhail M. Solovyev, Julian Marchesi
    FEMS Microbiology Ecology.2017; 93(2): fiw240.     CrossRef
  • A review of intestinal microbes in grass carpCtenopharyngodon idellus(Valenciennes)
    Ngoc Tuan Tran, Gui-Tang Wang, Shan-Gong Wu
    Aquaculture Research.2017; 48(7): 3287.     CrossRef
  • Standardizing the microbiota of fish used in research
    I N Vatsos
    Laboratory Animals.2017; 51(4): 353.     CrossRef
  • The gut microbiome and degradation enzyme activity of wild freshwater fishes influenced by their trophic levels
    Han Liu, Xianwu Guo, Ravi Gooneratne, Ruifang Lai, Cong Zeng, Fanbin Zhan, Weimin Wang
    Scientific Reports.2016;[Epub]     CrossRef
  • Effects of host genetics and environment on egg‐associated microbiotas in brown trout (Salmo trutta)
    Laetitia G. E. Wilkins, Luca Fumagalli, Claus Wedekind
    Molecular Ecology.2016; 25(19): 4930.     CrossRef
  • Ontogenetic Characterization of the Intestinal Microbiota of Channel Catfish through 16S rRNA Gene Sequencing Reveals Insights on Temporal Shifts and the Influence of Environmental Microbes
    Jacob W. Bledsoe, Brian C. Peterson, Kelly S. Swanson, Brian C. Small, John F. Rawls
    PLOS ONE.2016; 11(11): e0166379.     CrossRef
  • The influence of weight and gender on intestinal bacterial community of wild largemouth bronze gudgeon (Coreius guichenoti, 1874)
    Xuemei Li, Qingyun Yan, Einar Ringø, Xingbing Wu, Yongfeng He, Deguo Yang
    BMC Microbiology.2016;[Epub]     CrossRef
  • Environmental filtering decreases with fish development for the assembly of gut microbiota
    Qingyun Yan, Jinjin Li, Yuhe Yu, Jianjun Wang, Zhili He, Joy D. Van Nostrand, Megan L. Kempher, Liyou Wu, Yaping Wang, Lanjie Liao, Xinghao Li, Shu Wu, Jiajia Ni, Chun Wang, Jizhong Zhou
    Environmental Microbiology.2016; 18(12): 4739.     CrossRef
  • A new view of the fish gut microbiome: Advances from next-generation sequencing
    Mahdi Ghanbari, Wolfgang Kneifel, Konrad J. Domig
    Aquaculture.2015; 448: 464.     CrossRef
  • Analysis of Rhizosphere Soil Bacterial Communities on Seonginbong, Ulleungdo Island
    Yoon-Jong Nam, Hyeokjun Yoon, Hyun Kim, Jong-Guk Kim
    Journal of Life Science.2015; 25(3): 323.     CrossRef
  • Community Structure of Skin Microbiome of Gulf Killifish, Fundulus grandis, Is Driven by Seasonality and Not Exposure to Oiled Sediments in a Louisiana Salt Marsh
    Andrea M. Larsen, Stephen A. Bullard, Matthew Womble, Covadonga R. Arias
    Microbial Ecology.2015; 70(2): 534.     CrossRef
  • Gut Microbiota Dynamics during Dietary Shift in Eastern African Cichlid Fishes
    Laura Baldo, Joan Lluís Riera, Ave Tooming-Klunderud, M. Mar Albà, Walter Salzburger, Diego Fontaneto
    PLOS ONE.2015; 10(5): e0127462.     CrossRef
  • Selection in the host structures the microbiota associated with developing cod larvae (Gadus morhua)
    Ingrid Bakke, Eivind Coward, Tom Andersen, Olav Vadstein
    Environmental Microbiology.2015; 17(10): 3914.     CrossRef
  • Comparative Analysis of the Intestinal Bacterial Communities in Different Species of Carp by Pyrosequencing
    Tongtong Li, Meng Long, François-Joël Gatesoupe, Qianqian Zhang, Aihua Li, Xiaoning Gong
    Microbial Ecology.2015; 69(1): 25.     CrossRef
  • Effects of Host Phylogeny and Habitats on Gut Microbiomes of Oriental River Prawn (Macrobrachium nipponense)
    Tzong-Der Tzeng, Yueh-Yang Pao, Po-Cheng Chen, Francis Cheng-Hsuan Weng, Wen Dar Jean, Daryi Wang, Gaofeng Qiu
    PLOS ONE.2015; 10(7): e0132860.     CrossRef
  • Sorption and degradation of triclosan in sediments and its effect on microbes
    Xiaolong Huang, Chenxi Wu, Hongjuan Hu, Yuhe Yu, Jiantong Liu
    Ecotoxicology and Environmental Safety.2015; 116: 76.     CrossRef
  • Intestinal bacterial community structure differs between healthy and inflamed intestines in Atlantic salmon (Salmo salar L.)
    Felipe E. Reveco, Margareth Øverland, Odd H. Romarheim, Liv T. Mydland
    Aquaculture.2014; 420-421: 262.     CrossRef
  • The Colonization Dynamics of the Gut Microbiota in Tilapia Larvae
    Christos Giatsis, Detmer Sipkema, Hauke Smidt, Johan Verreth, Marc Verdegem, Pikul Jiravanichpaisal
    PLoS ONE.2014; 9(7): e103641.     CrossRef
  • Do the intestinal microbiotas differ between paddlefish (Polyodon spathala ) and bighead carp (Aristichthys nobilis ) reared in the same pond?
    X.M. Li, Y.J. Zhu, Q.Y. Yan, E. Ringø, D.G. Yang
    Journal of Applied Microbiology.2014; 117(5): 1245.     CrossRef
  • Comparative study on gastrointestinal microbiota of eight fish species with different feeding habits
    J. Li, J. Ni, J. Li, C. Wang, X. Li, S. Wu, T. Zhang, Y. Yu, Q. Yan
    Journal of Applied Microbiology.2014; 117(6): 1750.     CrossRef
  • Probiotics in aquaculture: a current assessment
    Tania Pérez‐Sánchez, Imanol Ruiz‐Zarzuela, Ignacio de Blas, José L. Balcázar
    Reviews in Aquaculture.2014; 6(3): 133.     CrossRef
  • Gut Microbiota Contributes to the Growth of Fast-Growing Transgenic Common Carp (Cyprinus carpio L.)
    Xuemei Li, Qingyun Yan, Shouqi Xie, Wei Hu, Yuhe Yu, Zihua Hu, Kostas Bourtzis
    PLoS ONE.2013; 8(5): e64577.     CrossRef
  • Bacterial Diversity in the Guts of Sea Cucumbers (Apostichopus japonicus) and Shrimps (Litopenaeus vannamei) Investigated with Tag-Encoded 454 Pyrosequencing of 16S rRNA Genes
    Eun Soo Noh, Young-Sam Kim, Dong-Hyun Kim, Kyoung-Ho Kim
    The Korean Journal of Microbiology.2013; 49(3): 237.     CrossRef
The Ecology of Vibrio vulnificus, Vibrio cholerae, and Vibrio parahaemolyticus in North Carolina Estuaries
Karen Dyer Blackwell , James D. Oliver
J. Microbiol. 2008;46(2):146-153.   Published online June 11, 2008
DOI: https://doi.org/10.1007/s12275-007-0216-2
  • 273 View
  • 0 Download
  • 104 Crossref
AbstractAbstract PDF
While numerous studies have characterized the distribution and/or ecology of various pathogenic Vibrio spp., here we have simultaneously examined several estuarine sites for Vibrio vulnificus, V. cholerae, and V. parahaemolyticus. For a one year period, waters and sediment were monitored for the presence of these <br>three pathogens at six different sites on the east coast of North Carolina in the United States. All three pathogens, identified using colony hybridization and PCR methods, occurred in these estuarine environments, although V. cholerae occurred only infrequently and at very low levels. Seventeen chemical, physical, and biological parameters were investigated, including salinity, water temperature, turbidity, dissolved oxygen, levels of various inorganic nutrients and dissolved organic carbon, as well as total vibrios, total coliforms, and E. coli. We found each of the Vibrio spp. in water and sediment to correlate to several of these environmental measurements, with water temperature and total Vibrio levels correlating highly (P<0.0001) with occurrence of the three pathogens. Thus, these two parameters may represent simple assays for characterizing the potential public health hazard of estuarine waters.

Citations

Citations to this article as recorded by  
  • Macroalgae host pathogenic Vibrio spp. in a temperate estuary
    Alexandra H. Geisser, Abigail K. Scro, Roxanna Smolowitz, Robinson W. Fulweiler
    Frontiers in Marine Science.2025;[Epub]     CrossRef
  • Culturable Plastisphere from the 75° N Subarctic Transect as a Potential Vector of Pathogens and Antibiotic-Resistant Bacteria
    Gabriella Caruso, Maria Papale, Alessandro Ciro Rappazzo, Maurizio Azzaro
    Journal of Marine Science and Engineering.2025; 13(3): 448.     CrossRef
  • Alginate poly and oligosaccharide (AOS) from Sargassum sp. as immunostimulant in gnotobiotic artemia challenge tests and antibacterial diffusion disc assay against pathogenic Vibrio parahaemolyticus
    Ervia Yudiati, Nuril Azhar, Muhammad Janib Achmad, Sunaryo Sunaryo, Adi Susanto, Bambang Yulianto, Rabia O. Alghazeer, Wafa S. Alansari, Ghalia Shamlan
    Main Group Chemistry.2025; 24(3): 137.     CrossRef
  • Antibiotic Resistance in Vibrio parahaemolyticus: Mechanisms, Dissemination, and Global Public Health Challenges—A Comprehensive Review
    Yingpeng Li, Gongshi Lin, Theerakamol Pengsakul, Qingpi Yan, Lixing Huang
    Reviews in Aquaculture.2025;[Epub]     CrossRef
  • Non-toxigenic Vibrio cholerae – just another cause of vibriosis or a potential new pandemic?
    George Sebastian Gherlan, Dragos Stefan Lazar , Simin Aysel Florescu
    Archive of Clinical Cases.2025; 12(1): 5.     CrossRef
  • Ecological Health and Freshwater Pathogen Using eDNA Metabarcoding: A Preliminary Assessment for Environmental Surveillance Development in Malaysia
    Jiao Yang, Subha Bhassu, Ghazanfer Ali, Thenmoli Govindasamy, Muhamad Afiq Aziz, Arutchelvan Rajamanikam
    Microorganisms.2025; 13(9): 2055.     CrossRef
  • Warmer Oceans Will Increase Abundance of Human Pathogens on Seaweeds
    Sidney Wilson, Mahasweta Saha
    Phycology.2025; 5(3): 38.     CrossRef
  • Machine learning to predict the relationship between Vibrio spp. concentrations in seawater and oysters and prevalent environmental conditions
    Shuyi Feng, Shraddha Karanth, Esam Almuhaideb, Salina Parveen, Abani K. Pradhan
    Food Research International.2024; 188: 114464.     CrossRef
  • Control of Vibrio vulnificus proliferation in the Baltic Sea through eutrophication and algal bloom management
    David J. Riedinger, Victor Fernández-Juárez, Luis F. Delgado, Theodor Sperlea, Christiane Hassenrück, Daniel P. R. Herlemann, Christian Pansch, Marija Kataržytė, Florian Bruck, Alwin Ahrens, Marcin Rakowski, Kasia Piwosz, Angela Stevenson, Thorsten B. H.
    Communications Earth & Environment.2024;[Epub]     CrossRef
  • Isolation of Vibrio cholerae and Vibrio vulnificus from Estuarine Waters, and Genotyping of V. vulnificus Isolates Using Loop-Mediated Isothermal Amplification
    Shin-ichi Miyoshi, Megumi Kurata, Riho Hirose, Masaya Yoshikawa, Yong Liang, Yosuke Yamagishi, Tamaki Mizuno
    Microorganisms.2024; 12(5): 877.     CrossRef
  • Environmental Drivers of the Divergence of Harveyi Clade Pathogens with Distinctive Virulence Gene Profiles
    Andrei L. Barkovskii, Cameron Brown
    Microorganisms.2024; 12(11): 2234.     CrossRef
  • Public health aspects of Vibrio spp. related to the consumption of seafood in the EU
    Konstantinos Koutsoumanis, Ana Allende, Avelino Alvarez‐Ordóñez, Declan Bolton, Sara Bover‐Cid, Marianne Chemaly, Alessandra De Cesare, Lieve Herman, Friederike Hilbert, Roland Lindqvist, Maarten Nauta, Romolo Nonno, Luisa Peixe, Giuseppe Ru, Marion Simmo
    EFSA Journal.2024;[Epub]     CrossRef
  • Prevalence of Vibrio parahaemolyticus, Vibrio cholerae, and Vibrio alginolyticus in a White-leg Shrimp (Litopenaeus vannamei) Farm in Sarawak
    Dalene Lesen, Elexson Nillian, Dayang Najwa Awang Baki, Tunung Robin
    Pertanika Journal of Science and Technology.2024; 32(5): 2233.     CrossRef
  • Water pollution influencing contamination of Vibrio bacteria in the coastal aquaculture area of Chanthaburi and Trat Provinces
    Jakkapan Potipat, Chawanrat Somnuek, Sutthinee Mekprayoon
    Journal of Applied Research on Science and Technology (JARST).2024;[Epub]     CrossRef
  • Temperature, sediment resuspension, and salinity drive the prevalence of Vibrio vulnificus in the coastal Baltic Sea
    Víctor Fernández-Juárez, David J. Riedinger, Joao Bosco Gusmao, Luis Fernando Delgado-Zambrano, Guillem Coll-García, Vasiliki Papazachariou, Daniel P. R. Herlemann, Christian Pansch, Anders F. Andersson, Matthias Labrenz, Lasse Riemann, Stephen J. Giovann
    mBio.2024;[Epub]     CrossRef
  • Tracking Vibrio : population dynamics and ecology of Vibrio parahaemolyticus and V. vulnificus in an Alabama estuary
    Blair H. Morrison, Jessica L. Jones, Brian Dzwonkowski, Jeffrey W. Krause, Allison Veach
    Microbiology Spectrum.2024;[Epub]     CrossRef
  • Physiological adaptation and gut microbiota changes of orange mud crab Scylla olivacea in response to increased temperature condition
    Yang Ling, Peng Xu, Nor Afiqah-Aleng, Sairatul Dahlianis Ishak, Youji Wang, Alexander Chong Shu-Chien, Yeong Yik Sung, Rusydi Rozaimi, Hon Jung Liew, Hanafiah Fazhan, Khor Waiho
    Aquatic Sciences.2024;[Epub]     CrossRef
  • Optimum environmental conditions controlling prevalence of vibrio parahaemolyticus in marine environment
    Peyman Namadi, Zhiqiang Deng
    Marine Environmental Research.2023; 183: 105828.     CrossRef
  • Tools to Enumerate and Predict Distribution Patterns of Environmental Vibrio vulnificus and Vibrio parahaemolyticus
    Lisa A. Waidner, Trupti V. Potdukhe
    Microorganisms.2023; 11(10): 2502.     CrossRef
  • First Steps towards a near Real-Time Modelling System of Vibrio vulnificus in the Baltic Sea
    Eike M. Schütt, Marie A. J. Hundsdörfer, Avril J. E. von Hoyningen-Huene, Xaver Lange, Agnes Koschmider, Natascha Oppelt
    International Journal of Environmental Research and Public Health.2023; 20(8): 5543.     CrossRef
  • Widespread human waste pollution in surface waters observed throughout the urbanized, coastal communities of Lee County, Florida, USA
    Kevin N. Tyre, Rachel A. Brewton, Lisa B. Kreiger, Brian E. Lapointe
    Science of The Total Environment.2023; 879: 162716.     CrossRef
  • Vertical dynamics of free-living and particle-associated vibrio communities in the eastern tropical Indian Ocean
    Shaodong Zhu, Xiaolei Wang, Wenbin Zhao, Yulin Zhang, Derui Song, Haojin Cheng, Xiao-Hua Zhang
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Environmental Drivers of Vibrio cholerae Abundances in Mobile Bay, Alabama
    Elizabeth Leard, Ruth H. Carmichael, Alice C. Ortmann, Jessica L. Jones, Salina Parveen
    Microbiology Spectrum.2023;[Epub]     CrossRef
  • Non-serogroup O1/O139 agglutinable Vibrio cholerae: a phylogenetically and genealogically neglected yet emerging potential pathogen of clinical relevance
    Bright E. Igere, Anthony I. Okoh, Uchechukwu U. Nwodo
    Archives of Microbiology.2022;[Epub]     CrossRef
  • The effect of off-bottom versus on-bottom oyster culture on total and pathogenic Vibrio spp. abundances in oyster tissue, water and sediment samples
    Abigail K. Scro, James Westphalen, Hauke L. Kite-Powell, John W. Brawley, Roxanna M. Smolowitz
    International Journal of Food Microbiology.2022; 379: 109870.     CrossRef
  • Latitudinal Dynamics of Vibrio along the Eastern Coastline of Australia
    Nathan L. R. Williams, Nachshon Siboni, William L. King, Varunan Balaraju, Anna Bramucci, Justin R. Seymour
    Water.2022; 14(16): 2510.     CrossRef
  • Effects of tumbling, refrigeration, and resubmersion on Vibrio parahaemolyticus and V. vulnificus levels in North Carolina cultured oysters (C. virginica)
    Victoria L. Pruente, Jessica L. Jones, Madison D. McGough, William C. Walton
    Aquaculture.2022; 546: 737343.     CrossRef
  • Dynamic Subspecies Population Structure of Vibrio cholerae in Dhaka, Bangladesh
    Tania Nasreen, Mohammad Tarequl Islam, Kevin Y. H. Liang, Fatema-Tuz Johura, Paul C. Kirchberger, Eric Hill, Marzia Sultana, Rebecca J. Case, Munirul Alam, Yann F. Boucher
    Microbial Ecology.2022; 84(3): 730.     CrossRef
  • A Novel Cooperative Metallo-β-Lactamase Fold Metallohydrolase from Pathogen Vibrio vulnificus Exhibits β-Lactam Antibiotic-Degrading Activities
    Wen-Jung Lu, Pang-Hung Hsu, Hong-Ting Victor Lin
    Antimicrobial Agents and Chemotherapy.2021;[Epub]     CrossRef
  • Viable Putative Vibrio vulnificus and parahaemolyticus in the Pensacola and Perdido Bays: Water Column, Sediments, and Invertebrate Biofilms
    Trupti V. Potdukhe, Jane M. Caffrey, Mackenzie J. Rothfus, Carrie E. Daniel, Michael E. Swords, Barbara B. Albrecht, Wade H. Jeffrey, Lisa A. Waidner
    Frontiers in Marine Science.2021;[Epub]     CrossRef
  • The Effect of Visible Light on Cell Envelope Subproteome during Vibrio harveyi Survival at 20 °C in Seawater
    Maite Orruño, Claudia Parada, Vladimir R. Kaberdin, Inés Arana
    Microorganisms.2021; 9(3): 594.     CrossRef
  • Occurrence and dynamics of potentially pathogenic vibrios in the wet-dry tropics of northern Australia
    Anna Padovan, Nachshon Siboni, Mirjam Kaestli, William L. King, Justin R. Seymour, Karen Gibb
    Marine Environmental Research.2021; 169: 105405.     CrossRef
  • Environmental parameters associated with incidence and transmission of pathogenic Vibrio spp.
    Kyle D. Brumfield, Moiz Usmani, Kristine M. Chen, Mayank Gangwar, Antarpreet S. Jutla, Anwar Huq, Rita R. Colwell
    Environmental Microbiology.2021; 23(12): 7314.     CrossRef
  • Improved isolation and detection of toxigenic Vibrio parahaemolyticus from coastal water in Saudi Arabia using immunomagnetic enrichment
    Mariam Almejhim, Mohammed Aljeldah, Nasreldin Elhadi
    PeerJ.2021; 9: e12402.     CrossRef
  • The Seasonal Microbial Ecology of Plankton and Plankton-Associated Vibrio parahaemolyticus in the Northeast United States
    Meghan A. Hartwick, Audrey Berenson, Cheryl A. Whistler, Elena N. Naumova, Stephen H. Jones, Edward G. Dudley
    Applied and Environmental Microbiology.2021;[Epub]     CrossRef
  • Experimental evaluation of survival of Vibrio parahaemolyticus in fertilized cold‐water sediment
    B. Collin, B. Hernroth
    Journal of Applied Microbiology.2020; 129(1): 75.     CrossRef
  • Vertical variation in Vibrio community composition in Sansha Yongle Blue Hole and its ability to degrade macromolecules
    Bei Li, Jiwen Liu, Shun Zhou, Liang Fu, Peng Yao, Lin Chen, Zuosheng Yang, Xiaolei Wang, Xiao-Hua Zhang
    Marine Life Science & Technology.2020; 2(1): 60.     CrossRef
  • Dynamic stock model for analysing semi‐intensive production of whiteleg shrimpLitopenaeus(Penaeus)vannameiaffected by the acute hepatopancreatic necrosis disease: Assessment of disease severity indicators and relationships with pond water quality paramete
    Nallely Estrada‐Perez, Javier M. J. Ruiz‐Velazco, Francisco J. Magallon‐Barajas, Angel I. Campa‐Cordova, Alfredo Hernández‐Llamas
    Aquaculture Research.2020; 51(1): 242.     CrossRef
  • Patterns and drivers of Vibrio isolates phylogenetic diversity in the Beibu Gulf, China
    Xing Chen, Hong Du, Si Chen, Xiaoli Li, Huaxian Zhao, Qiangsheng Xu, Jinli Tang, Gonglingxia Jiang, Shuqi Zou, Ke Dong, Jonathan M. Adams, Nan Li, Chengjian Jiang
    Journal of Microbiology.2020; 58(12): 998.     CrossRef
  • Hydroxyapatite powder cake filtration reduces false positives associated with halophilic bacteria when evaluating Escherichia coli in seawater using Colilert-18
    Hiroaki Tsuchioka, Shinji Izumiyama, Takuro Endo, Takaomi Wada, Hiroyuki Harada, Atsushi Hashimoto
    Journal of Microbiological Methods.2019; 159: 69.     CrossRef
  • The risk assessment of Vibrio parahaemolyticus in raw oysters in Taiwan under the seasonal variations, time horizons, and climate scenarios
    Nodali Ndraha, Hsin-I Hsiao
    Food Control.2019; 102: 188.     CrossRef
  • Investigating the virulence genes and antibiotic susceptibility patterns of Vibrio cholerae O1 in environmental and clinical isolates in Accra, Ghana
    David Abana, Elizabeth Gyamfi, Magdalene Dogbe, Grace Opoku, David Opare, Gifty Boateng, Lydia Mosi
    BMC Infectious Diseases.2019;[Epub]     CrossRef
  • Modeling the Potential of Submarine Groundwater Discharge to Facilitate Growth of Vibrio cholerae Bacteria
    Felix Vollberg, Marc Walther, Astrid Gärdes, Nils Moosdorf
    Hydrology.2019; 6(2): 39.     CrossRef
  • Forecasting Seasonal Vibrio parahaemolyticus Concentrations in New England Shellfish
    Meghan A. Hartwick, Erin A. Urquhart, Cheryl A. Whistler, Vaughn S. Cooper, Elena N. Naumova, Stephen H. Jones
    International Journal of Environmental Research and Public Health.2019; 16(22): 4341.     CrossRef
  • Ability of Vibrio vulnificus isolated from fish of the Lagoa dos Patos estuary in south Brazil to form biofilms after sublethal stress and bacterial resistance to antibiotics and sanitizers
    Débora Rodrigues Silveira, Janaina Viana da Rosa, Kauana Kaefer, Luiz Gustavo Bach, Amanda de Oliveira Barbosa, Cláudio Dias Timm
    International Journal of Food Microbiology.2019; 303: 19.     CrossRef
  • Decadal monitoring reveals an increase in Vibrio spp. concentrations in the Neuse River Estuary, North Carolina, USA
    Brett Froelich, Raul Gonzalez, Denene Blackwood, Kellen Lauer, Rachel Noble, Iddya Karunasagar
    PLOS ONE.2019; 14(4): e0215254.     CrossRef
  • Spatiotemporal Dynamics of Vibrio cholerae in Turbid Alkaline Lakes as Determined by Quantitative PCR
    Rupert Bliem, Georg Reischer, Rita Linke, Andreas Farnleitner, Alexander Kirschner, Eric V. Stabb
    Applied and Environmental Microbiology.2018;[Epub]     CrossRef
  • Effects of temperature and salinity on prevalence and intensity of infection of blue crabs, Callinectes sapidus, by Vibrio cholerae, V. parahaemolyticus, and V. vulnificus in Louisiana
    Timothy J. Sullivan, Joseph E. Neigel
    Journal of Invertebrate Pathology.2018; 151: 82.     CrossRef
  • Environmental Calcium Initiates a Feed-Forward Signaling Circuit That Regulates Biofilm Formation and Rugosity in Vibrio vulnificus
    Daniel M. Chodur, Patrick Coulter, Jacob Isaacs, Meng Pu, Nico Fernandez, Chris M. Waters, Dean A. Rowe-Magnus, Matthew R. Parsek
    mBio.2018;[Epub]     CrossRef
  • Potential impacts of hypoxia and a warming ocean on oyster microbiomes
    Bushra Khan, Sandra M. Clinton, Timothy J. Hamp, James D. Oliver, Amy H. Ringwood
    Marine Environmental Research.2018; 139: 27.     CrossRef
  • blaNDM-1-producing Vibrio parahaemolyticus and V. vulnificus isolated from recreational beaches in Lagos, Nigeria
    Abolade A. Oyelade, Olawale Olufemi Adelowo, Obasola Ezekiel Fagade
    Environmental Science and Pollution Research.2018; 25(33): 33538.     CrossRef
  • Isolation, molecular characterization, and antibiotic resistance patterns of Vibrio parahaemolyticus isolated from coastal water in the Eastern Province of Saudi Arabia
    Lubna Ghenem, Nasreldin Elhadi
    Journal of Water and Health.2018; 16(1): 57.     CrossRef
  • Vibrio Ecology in the Neuse River Estuary, North Carolina, Characterized by Next-Generation Amplicon Sequencing of the Gene Encoding Heat Shock Protein 60 ( hsp60 )
    Kelsey J. Jesser, Rachel T. Noble, Christopher A. Elkins
    Applied and Environmental Microbiology.2018;[Epub]     CrossRef
  • The ability of algal organic matter and surface runoff to promote the abundance of pathogenic and non-pathogenic strains of Vibrio parahaemolyticus in Long Island Sound, USA
    Jake D. Thickman, Christopher J. Gobler, Adelaide Almeida
    PLOS ONE.2017; 12(10): e0185994.     CrossRef
  • Deep-sequencing of the bacterial microbiota in commercial-scale recirculating and semi-closed aquaculture systems for Atlantic salmon post-smolt production
    Ida Rud, Jelena Kolarevic, Astrid Buran Holan, Ingunn Berget, Sara Calabrese, Bendik Fyhn Terjesen
    Aquacultural Engineering.2017; 78: 50.     CrossRef
  • Elucidation of the tidal influence on bacterial populations in a monsoon influenced estuary through simultaneous observations
    Lidita Khandeparker, Ranjith Eswaran, Laxman Gardade, Nishanth Kuchi, Kaushal Mapari, Sneha D. Naik, Arga Chandrashekar Anil
    Environmental Monitoring and Assessment.2017;[Epub]     CrossRef
  • Spatiotemporal Dynamics of Total Viable Vibrio spp. in a NW Mediterranean Coastal Area
    Léa Girard, Sébastien Peuchet, Pierre Servais, Annabelle Henry, Nadine Charni-Ben-Tabassi, Julia Baudart
    Microbes and environments.2017; 32(3): 210.     CrossRef
  • Environmental Determinants of Vibrio parahaemolyticus in the Chesapeake Bay
    Benjamin J. K. Davis, John M. Jacobs, Meghan F. Davis, Kellogg J. Schwab, Angelo DePaola, Frank C. Curriero, Donald W. Schaffner
    Applied and Environmental Microbiology.2017;[Epub]     CrossRef
  • Vibrio parahaemolyticusandVibrio vulnificusin South America: water, seafood and human infections
    S.M. Raszl, B.A. Froelich, C.R.W. Vieira, A.D. Blackwood, R.T. Noble
    Journal of Applied Microbiology.2016; 121(5): 1201.     CrossRef
  • Spatiotemporal Dynamics of Vibrio spp. within the Sydney Harbour Estuary
    Nachshon Siboni, Varunan Balaraju, Richard Carney, Maurizio Labbate, Justin R. Seymour
    Frontiers in Microbiology.2016;[Epub]     CrossRef
  • Detection and Quantification of Vibrio cholerae, Vibrio parahaemolyticus, and Vibrio vulnificus in Coastal Waters of Guinea-Bissau (West Africa)
    Ana Machado, Adriano A. Bordalo
    EcoHealth.2016; 13(2): 339.     CrossRef
  • The Biology of Vibrio vulnificus
    James D. Oliver, Michael Sadowsky
    Microbiology Spectrum.2015;[Epub]     CrossRef
  • Influence of Environmental Factors onVibriospp. in Coastal Ecosystems
    Crystal N. Johnson, Michael Sadowsky
    Microbiology Spectrum.2015;[Epub]     CrossRef
  • Environmental parameters influence on the dynamics of total and pathogenic Vibrio parahaemolyticus densities in Crassostrea virginica harvested from Mexico’s Gulf coast
    Karla M. López-Hernández, Violeta T. Pardío-Sedas, Leonardo Lizárraga-Partida, José de J. Williams, David Martínez-Herrera, Argel Flores-Primo, Roxana Uscanga-Serrano, Karla Rendón-Castro
    Marine Pollution Bulletin.2015; 91(1): 317.     CrossRef
  • Rapid Proliferation of Vibrio parahaemolyticus, Vibrio vulnificus, and Vibrio cholerae during Freshwater Flash Floods in French Mediterranean Coastal Lagoons
    Kevin Esteves, Dominique Hervio-Heath, Thomas Mosser, Claire Rodier, Marie-George Tournoud, Estelle Jumas-Bilak, Rita R. Colwell, Patrick Monfort, K. E. Wommack
    Applied and Environmental Microbiology.2015; 81(21): 7600.     CrossRef
  • Community-Level and Species-Specific Associations between Phytoplankton and Particle-Associated Vibrio Species in Delaware's Inland Bays
    Christopher R. Main, Lauren R. Salvitti, Edward B. Whereat, Kathryn J. Coyne, C. R. Lovell
    Applied and Environmental Microbiology.2015; 81(17): 5703.     CrossRef
  • Occurrence of Vibrio parahaemolyticus, Vibrio cholerae, and Vibrio vulnificus in the Aquacultural Environments of Taiwan
    Yao Hsien Tey, Koa-Jen Jong, Shin-Yuan Fen, Hin-Chung Wong
    Journal of Food Protection.2015; 78(5): 969.     CrossRef
  • Environmental influences on the seasonal distribution ofVibrio parahaemolyticusin the Pacific Northwest of the USA
    Rohinee N. Paranjpye, William B. Nilsson, Martin Liermann, Elizabeth D. Hilborn, Barbara J. George, Quanlin Li, Brian D. Bill, Vera L. Trainer, Mark S. Strom, Paul A. Sandifer, Gary King
    FEMS Microbiology Ecology.2015; 91(12): fiv121.     CrossRef
  • Host-Like Carbohydrates Promote Bloodstream Survival of Vibrio vulnificusIn Vivo
    Jean-Bernard Lubin, Warren G. Lewis, Nicole M. Gilbert, Cory M. Weimer, Salvador Almagro-Moreno, E. Fidelma Boyd, Amanda L. Lewis, A. J. Bäumler
    Infection and Immunity.2015; 83(8): 3126.     CrossRef
  • Sediment and Vegetation as Reservoirs of Vibrio vulnificus in the Tampa Bay Estuary and Gulf of Mexico
    Eva Chase, Suzanne Young, Valerie J. Harwood, K. E. Wommack
    Applied and Environmental Microbiology.2015; 81(7): 2489.     CrossRef
  • Dynamics of Vibrio cholerae abundance in Austrian saline lakes, assessed with quantitative solid‐phase cytometry
    Sonja Schauer, Stefan Jakwerth, Rupert Bliem, Julia Baudart, Philippe Lebaron, Steliana Huhulescu, Michael Kundi, Alois Herzig, Andreas H. Farnleitner, Regina Sommer, Alexander Kirschner
    Environmental Microbiology.2015; 17(11): 4366.     CrossRef
  • Snapshot of Vibrio parahaemolyticus densities in open and closed shellfish beds in Coastal South Carolina and Mississippi
    J. Gooch Moore, A. Ruple, K. Ballenger-Bass, S. Bell, P. L. Pennington, G. I. Scott
    Environmental Monitoring and Assessment.2014; 186(11): 7949.     CrossRef
  • Multipurpose assessment for the quantification of Vibrio spp. and total bacteria in fish and seawater using multiplex real‐time polymerase chain reaction
    Ji Yeun Kim, Jung‐Lim Lee
    Journal of the Science of Food and Agriculture.2014; 94(13): 2807.     CrossRef
  • Interspecific Quorum Sensing Mediates the Resuscitation of Viable but Nonculturable Vibrios
    Mesrop Ayrapetyan, Tiffany C. Williams, James D. Oliver, M. W. Griffiths
    Applied and Environmental Microbiology.2014; 80(8): 2478.     CrossRef
  • In-house validation of novel multiplex real-time PCR gene combination for the simultaneous detection of the main human pathogenic vibrios (Vibrio cholerae, Vibrio parahaemolyticus, and Vibrio vulnificus)
    Alejandro Garrido-Maestu, María-José Chapela, Elvira Peñaranda, Juan M. Vieites, Ana G. Cabado
    Food Control.2014; 37: 371.     CrossRef
  • Sequence and expression divergence of an ancient duplication of the chaperonin groESEL operon in Vibrio species
    Nityananda Chowdhury, Joseph J. Kingston, W. Brian Whitaker, Megan R. Carpenter, Analuisa Cohen, E. Fidelma Boyd
    Microbiology .2014; 160(9): 1953.     CrossRef
  • Defining the Niche of Vibrio parahaemolyticus During Pre- and Post-Monsoon Seasons in the Coastal Arabian Sea
    A.-S. Rehnstam-Holm, V. Atnur, A. Godhe
    Microbial Ecology.2014; 67(1): 57.     CrossRef
  • Quantification of Vibrio vulnificus in an Estuarine Environment: a Multi-Year Analysis Using QPCR
    Jennifer J. Wetz, A. Denene Blackwood, J. Stephen Fries, Zachary F. Williams, Rachel T. Noble
    Estuaries and Coasts.2014; 37(2): 421.     CrossRef
  • Survival ofVibrio vulnificusGenotypes in Male and Female Serum, and Production of Siderophores in Human Serum and Seawater
    Hye-young Kim, Mesrop Ayrapetyan, James D. Oliver
    Foodborne Pathogens and Disease.2014; 11(2): 119.     CrossRef
  • The role of wetland microinvertebrates in spreading human diseases
    Sucharit Basu Neogi, Shinji Yamasaki, Munirul Alam, Rubén José Lara
    Wetlands Ecology and Management.2014; 22(5): 469.     CrossRef
  • Seasonal Dynamics of Prokaryotic Abundance and Activities in Relation to Environmental Parameters in a Transitional Aquatic Ecosystem (Cape Peloro, Italy)
    R. Zaccone, M. Azzaro, F. Azzaro, A. Bergamasco, G. Caruso, M. Leonardi, R. La Ferla, G. Maimone, M. Mancuso, L. S. Monticelli, F. Raffa, E. Crisafi
    Microbial Ecology.2014; 67(1): 45.     CrossRef
  • Occurrence of Vibrio vulnificus and Toxigenic Vibrioparahaemolyticus on Sea Catfishes from Galveston Bay, Texas
    Leslie Baumeister, Mona E. Hochman, John R. Schwarz, Robin Brinkmeyer
    Journal of Food Protection.2014; 77(10): 1784.     CrossRef
  • Detection and differentiation of Vibrio vulnificus and V. sinaloensis in water and oysters of a Gulf of Mexico estuary
    Christopher Staley, Eva Chase, Valerie J. Harwood
    Environmental Microbiology.2013; 15(2): 623.     CrossRef
  • Multiplex Real-time Polymerase Chain Reaction Assays for Simultaneous Detection of Vibrio cholerae, Vibrio parahaemolyticus, and Vibrio vulnificus
    Jie Yeun Park, Semi Jeon, Jun Young Kim, Misun Park, Seonghan Kim
    Osong Public Health and Research Perspectives.2013; 4(3): 133.     CrossRef
  • Quantification of Vibrio parahaemolyticus, Vibrio vulnificus and Vibrio cholerae in French Mediterranean coastal lagoons
    Franck Cantet, Dominique Hervio-Heath, Audrey Caro, Cécile Le Mennec, Caroline Monteil, Catherine Quéméré, Anne Jolivet-Gougeon, Rita R. Colwell, Patrick Monfort
    Research in Microbiology.2013; 164(8): 867.     CrossRef
  • Multi-drug resistant toxigenic Vibrio cholerae O1 is persistent in water sources in New Bell-Douala, Cameroon
    Jane-Francis Tatah Kihla Akoachere, Thomas Njinuwoh Masalla, Henry Akum Njom
    BMC Infectious Diseases.2013;[Epub]     CrossRef
  • Quantitative Microbial Risk Assessment of Pathogenic Vibrios in Marine Recreational Waters of Southern California
    Gregory Dickinson, Keah-ying Lim, Sunny C. Jiang
    Applied and Environmental Microbiology.2013; 79(1): 294.     CrossRef
  • Temporal and Spatial Distribution Patterns of Potentially Pathogenic Vibrio spp. at Recreational Beaches of the German North Sea
    Simone I. Böer, Ernst-August Heinemeyer, Katrin Luden, René Erler, Gunnar Gerdts, Frank Janssen, Nicole Brennholt
    Microbial Ecology.2013; 65(4): 1052.     CrossRef
  • Development of a Real-Time Resistance Measurement for Vibrio parahaemolyticus Detection by the Lecithin-Dependent Hemolysin Gene
    Guiming Xiang, Xiaoyun Pu, Dongneng Jiang, Linlin Liu, Chang Liu, Xiaobo Liu, Richard C. Willson
    PLoS ONE.2013; 8(8): e72342.     CrossRef
  • Sialic Acid Catabolism and Transport Gene Clusters Are Lineage Specific in Vibrio vulnificus
    Jean-Bernard Lubin, Joseph J. Kingston, Nityananda Chowdhury, E. Fidelma Boyd
    Applied and Environmental Microbiology.2012; 78(9): 3407.     CrossRef
  • Characteristics of a sharp decrease in Vibrio parahaemolyticus infections and seafood contamination in Japan
    Yukiko Hara-Kudo, Shihoko Saito, Kayoko Ohtsuka, Shogo Yamasaki, Shunsuke Yahiro, Tomohiro Nishio, Yoshito Iwade, Yoshimitsu Otomo, Hirotaka Konuma, Hiroyuki Tanaka, Hiroshi Nakagawa, Kanji Sugiyama, Yoshiko Sugita-Konishi, Susumu Kumagai
    International Journal of Food Microbiology.2012; 157(1): 95.     CrossRef
  • Prevalence and Population Structure of Vibrio vulnificus on Fishes from the Northern Gulf of Mexico
    Zhen Tao, Andrea M. Larsen, Stephen A. Bullard, Anita C. Wright, Covadonga R. Arias
    Applied and Environmental Microbiology.2012; 78(21): 7611.     CrossRef
  • Year round patchiness of Vibrio vulnificus within a temperate Texas bay
    S.L.M. Franco, G.J. Swenson, R.A. Long
    Journal of Applied Microbiology.2012; 112(3): 593.     CrossRef
  • Apparent Loss of Vibrio vulnificus from North Carolina Oysters Coincides with a Drought-Induced Increase in Salinity
    Brett A. Froelich, Tiffany C. Williams, Rachel T. Noble, James D. Oliver
    Applied and Environmental Microbiology.2012; 78(11): 3885.     CrossRef
  • Ecology of Vibrio parahaemolyticus and Vibrio vulnificus in the Coastal and Estuarine Waters of Louisiana, Maryland, Mississippi, and Washington (United States)
    Crystal N. Johnson, John C. Bowers, Kimberly J. Griffitt, Vanessa Molina, Rachel W. Clostio, Shaofeng Pei, Edward Laws, Rohinee N. Paranjpye, Mark S. Strom, Arlene Chen, Nur A. Hasan, Anwar Huq, Nicholas F. Noriea, D. Jay Grimes, Rita R. Colwell
    Applied and Environmental Microbiology.2012; 78(20): 7249.     CrossRef
  • Occurrence of Vibrio parahaemolyticus and Vibrio alginolyticus in the German Bight over a seasonal cycle
    Sonja Oberbeckmann, Antje Wichels, Karen H. Wiltshire, Gunnar Gerdts
    Antonie van Leeuwenhoek.2011; 100(2): 291.     CrossRef
  • Temporal and Spatial Variability in Culturable Pathogenic Vibrio spp. in Lake Pontchartrain, Louisiana, following Hurricanes Katrina and Rita
    Olivia D. Nigro, Aixin Hou, Gayatri Vithanage, Roger S. Fujioka, Grieg F. Steward
    Applied and Environmental Microbiology.2011; 77(15): 5384.     CrossRef
  • Presence of Bacteroidales as a Predictor of Pathogens in Surface Waters of the Central California Coast
    Alexander Schriewer, Woutrina A. Miller, Barbara A. Byrne, Melissa A. Miller, Stori Oates, Patricia A. Conrad, Dane Hardin, Hsuan-Hui Yang, Nadira Chouicha, Ann Melli, Dave Jessup, Clare Dominik, Stefan Wuertz
    Applied and Environmental Microbiology.2010; 76(17): 5802.     CrossRef
  • Quantification and distribution of vibrio species in water from an estuary in Ceará-Brazil impacted by shrimp farming
    Renata A Costa, Giselle C Silva, Jackson R. O Peixoto, Gustavo H. F Vieira, Regine H. S. F Vieira
    Brazilian Journal of Oceanography.2010; 58(3): 183.     CrossRef
  • Ecology of pathogenic and non‐pathogenic Vibrio parahaemolyticus on the French Atlantic coast. Effects of temperature, salinity, turbidity and chlorophyll a
    Deter Julie, Lozach Solen, Véron Antoine, Chollet Jaufrey, Derrien Annick, Hervio‐Heath Dominique
    Environmental Microbiology.2010; 12(4): 929.     CrossRef
  • Putative virulence factors identified inVibrio vulnificusstrains isolated from oysters and seawater in Mexico
    Elsa I. Quiñones-Ramírez, Ivan Natividad Bonifacio, Miguel Betancourt-Rule, Florina Ramirez-Vives, Carlos Vázquez-Salinas
    International Journal of Environmental Health Research.2010; 20(6): 395.     CrossRef
  • Chlorophyll a might structure a community of potentially pathogenic culturable Vibrionaceae. Insights from a one‐year study of water and mussels surveyed on the French Atlantic coast
    J. Deter, S. Lozach, A. Derrien, A. Véron, J. Chollet, D. Hervio‐Heath
    Environmental Microbiology Reports.2010; 2(1): 185.     CrossRef
  • Benthic ecology of Vibrio spp. and pathogenic Vibrio species in a coastal Mediterranean environment (La Spezia Gulf, Italy)
    Luigi Vezzulli, Elisabetta Pezzati, Mariapaola Moreno, Mauro Fabiano, Luigi Pane, Carla Pruzzo
    Microbial Ecology.2009; 58(4): 808.     CrossRef
  • Rapid enumeration ofEscherichia coliin marine bathing waters: potential interference of nontarget bacteria
    J. Baudart, P. Servais, H. De Paoli, A. Henry, P. Lebaron
    Journal of Applied Microbiology.2009; 107(6): 2054.     CrossRef
Acinetobacter baumannii Outer Membrane Protein A Modulates the Biogenesis of Outer Membrane Vesicles
Dong Chan Moon , Chul Hee Choi , Jung Hwa Lee , Chi-Won Choi , Hye-Yeon Kim , Jeong Soon Park , Seung Il Kim , Je Chul Lee
J. Microbiol. 2012;50(1):155-160.   Published online February 27, 2012
DOI: https://doi.org/10.1007/s12275-012-1589-4
  • 435 View
  • 0 Download
  • 103 Crossref
AbstractAbstract PDF
Acinetobacter baumannii secretes outer membrane vesicles (OMVs) during both in vitro and in vivo growth, but the biogenesis mechanism by which A. baumannii produces OMVs remains undefined. Outer membrane protein A of A. baumannii (AbOmpA) is a major protein in the outer membrane and the C-terminus of AbOmpA interacts with diaminopimelate of peptidoglycan. This study investigated the role of AbOmpA in the biogenesis of A. baumannii OMVs. Quantitative and qualitative approaches were used to analyze OMV biogenesis in A. baumannii ATCC 19606T and an isogenic ΔAbOmpA mutant. OMV production was significantly increased in the ΔAbOmpA mutant compared to wild-type bacteria as demonstrated by quantitation of proteins and lipopolysaccharides (LPS) packaged in OMVs. LPS profiles prepared from OMVs from wild-type bacteria and the ΔAbOmpA mutant had identical patterns, but proteomic analysis showed different protein constituents in OMVs from wild-type bacteria compared to the ΔAbOmpA mutant. In conclusion, AbOmpA influences OMV biogenesis by controlling OMV production and protein composition.

Citations

Citations to this article as recorded by  
  • Brucella suis ΔmapB outer membrane vesicles as an acellular vaccine against systemic and mucosal B. suis infection
    Florencia Muñoz González, Magali G. Bialer, Maria L. Cerutti, Silvia M. Estein, Lila Y. Ramis, Pablo C. Baldi, Ángeles Zorreguieta, Mariana C. Ferrero
    Frontiers in Immunology.2025;[Epub]     CrossRef
  • Exploring the Multifaceted Genus Acinetobacter: the Facts, the Concerns and the Oppoptunities the Dualistic Geuns Acinetobacter
    Tsvetana Muleshkova, Inga Bazukyan, Konstantinos Papadimitriou, Velitchka Gotcheva, Angel Angelov, Svetoslav G. Dimov
    Journal of Microbiology and Biotechnology.2025;[Epub]     CrossRef
  • Engineering bacterial membrane vesicles: A new paradigm in biomedical innovation
    Xiao Xu, Limei Xu, Caining Wen, Yuanmin Zhang, Jiang Xia, Yujie Liang
    Coordination Chemistry Reviews.2025; 543: 216895.     CrossRef
  • AbOmpA in Acinetobacter baumannii: exploring virulence mechanisms of outer membrane-integrated and outer membrane vesicle-associated AbOmpA and developing anti-infective agents targeting AbOmpA
    Man Hwan Oh, Md Minarul Islam, Nayeong Kim, Chul Hee Choi, Minsang Shin, Woo Shik Shin, Je Chul Lee
    Journal of Biomedical Science.2025;[Epub]     CrossRef
  • Engineered bacterial extracellular vesicles for gastrointestinal diseases
    Xinke Nie, Qiqiong Li, Ying He, Yushan Xu, Shanfeng Qiao, Xingdong Wang, Fan Meng, Junhua Xie, Shaoping Nie
    Journal of Controlled Release.2025; 385: 113972.     CrossRef
  • Cas3 of type I-Fa CRISPR-Cas system upregulates bacterial biofilm formation and virulence in Acinetobacter baumannii
    Tingting Guo, Jie Yang, Na Zhou, Xiaoli Sun, Changchao Huan, Tao Lin, Guangyu Bao, Jian Hu, Guocai Li
    Communications Biology.2025;[Epub]     CrossRef
  • Signaling in Acinetobacter baumannii: Quorum sensing and nucleotide second messengers
    Binbin Cui, Ganjin Peng, Liu-En Wang, Yinyue Deng
    Computational and Structural Biotechnology Journal.2025; 27: 2168.     CrossRef
  • Engineered Membrane Vesicle Production via oprF or oprI Deletion Has Distinct Phenotypic Effects in Pseudomonas putida
    Rebecca A. Wilkes, Tarryn E. Miller, Jacob Waldbauer, Nanqing Zhou, Lichun Zhang, Beth N. DiBiase, Neha P. Kamat, Ludmilla Aristilde, Gregg T. Beckham, Allison Z. Werner
    ACS Synthetic Biology.2025; 14(7): 2739.     CrossRef
  • Engineered Bacterial Extracellular Vesicles: Developments, Challenges, and Opportunities
    Qiqiong Li, Xinyang Chen, Junhua Xie, Shaoping Nie
    Engineering.2025;[Epub]     CrossRef
  • Bacterial outer membrane vesicles: a novel target in mediating bacterial infection and host immune responses
    Beiliang Miao, Jiatong Han, Yuru Jiang, Li Yu, Yingjun Liu, Fangyuan Du, Xinyu Zhu, Xuezhong Gong, Zhengsheng Li, Zeliang Chen, Shiwei Liu
    World Journal of Microbiology and Biotechnology.2025;[Epub]     CrossRef
  • The lipoprotein biosynthesis pathway: key to OXA-mediated carbapenem resistance in Acinetobacter baumannii
    Jorgelina Morán-Barrio, Lucía Giacone, Luciano Brambilla, Carolina Fabbri, Alejandro M. Viale, Alessandra Carattoli
    Antimicrobial Agents and Chemotherapy.2025;[Epub]     CrossRef
  • The aryl hydrocarbon receptor and FOS mediate cytotoxicity induced by Acinetobacter baumannii
    Chun Kew, Cristian Prieto-Garcia, Anshu Bhattacharya, Manuela Tietgen, Craig R. MacNair, Lindsey A. Carfrae, João Mello-Vieira, Stephan Klatt, Yi-Lin Cheng, Rajeshwari Rathore, Elise Gradhand, Ingrid Fleming, Man-Wah Tan, Stephan Göttig, Volkhard A. J. Ke
    Nature Communications.2024;[Epub]     CrossRef
  • Pathogenicity and virulence of Acinetobacter baumannii : Factors contributing to the fitness in healthcare settings and the infected host
    Massimiliano Lucidi, Daniela Visaggio, Antonella Migliaccio, Giulia Capecchi, Paolo Visca, Francesco Imperi, Raffaele Zarrilli
    Virulence.2024;[Epub]     CrossRef
  • Pan-Genome Plasticity and Virulence Factors: A Natural Treasure Trove for Acinetobacter baumannii
    Theodoros Karampatakis, Katerina Tsergouli, Payam Behzadi
    Antibiotics.2024; 13(3): 257.     CrossRef
  • Characterization and immunological effect of outer membrane vesicles from Pasteurella multocida on macrophages
    Jiaying Sun, Yee Huang, Xuefeng Li, Xiangfei Xu, Xuemei Cui, Fangjiao Hao, Quanan Ji, Chun Chen, Guolian Bao, Yan Liu
    Applied Microbiology and Biotechnology.2024;[Epub]     CrossRef
  • An in-depth exploration of the multifaceted roles of EVs in the context of pathogenic single-cell microorganisms
    Anna Sophia Feix, Emily Z. Tabaie, Aarshi N. Singh, Nathan J. Wittenberg, Emma H. Wilson, Anja Joachim, Melissa Bruckner Lodoen
    Microbiology and Molecular Biology Reviews.2024;[Epub]     CrossRef
  • Antimicrobial Resistance in Acinetobacter baumannii: A Challenge to Clinical Settings
    Shilpa Sharma, Amandeep Kaur, Renuka Bajaj, Kanwardeep Singh, Sarika Sharma, Sandeep Sharma
    Molecular Genetics, Microbiology and Virology.2024; 39(3): 219.     CrossRef
  • Outer membrane vesicles from genetically engineered Salmonella enterica serovar Typhimurium presenting Helicobacter pylori antigens UreB and CagA induce protection against Helicobact
    Qiong Liu, Yinpan Shang, Lu Shen, Xiaomin Yu, Yanli Cao, Lingbing Zeng, Hanchi Zhang, Zirong Rao, Yi Li, Ziwei Tao, Zhili Liu, Xiaotian Huang
    Virulence.2024;[Epub]     CrossRef
  • The role of extracellular vesicles in pyroptosis-mediated infectious and non-infectious diseases
    Cai-Hua Zhang, Ding-Ci Lu, Ying Liu, Lingzhi Wang, Gautam Sethi, Zhaowu Ma
    International Immunopharmacology.2024; 138: 112633.     CrossRef
  • Loss of Lipooligosaccharide Synthesis in Acinetobacter baumannii Produces Changes in Outer Membrane Vesicle Protein Content
    Beatriz Cano-Castaño, Andrés Corral-Lugo, Eva Gato, María C. Terrón, Antonio J. Martín-Galiano, Javier Sotillo, Astrid Pérez, Michael J. McConnell
    International Journal of Molecular Sciences.2024; 25(17): 9272.     CrossRef
  • The Role of Bacterial Extracellular Vesicles in the Immune Response to Pathogens, and Therapeutic Opportunities
    Eliud S. Peregrino, Jessica Castañeda-Casimiro, Luis Vázquez-Flores, Sergio Estrada-Parra, Carlos Wong-Baeza, Jeanet Serafín-López, Isabel Wong-Baeza
    International Journal of Molecular Sciences.2024; 25(11): 6210.     CrossRef
  • A genetic engineering strategy to enhance outer membrane vesicle-mediated extracellular electron transfer of Geobacter sulfurreducens
    Yanlun Fang, Guiqin Yang, Xian Wu, Canfen Lin, Baoli Qin, Li Zhuang
    Biosensors and Bioelectronics.2024; 250: 116068.     CrossRef
  • Bacterial extracellular vesicles: Emerging nanoplatforms for biomedical applications
    Sangiliyandi Gurunathan, Jin-Hoi Kim
    Microbial Pathogenesis.2023; 183: 106308.     CrossRef
  • Outer Membrane Vesicles from Acinetobacter baumannii: Biogenesis, Functions, and Vaccine Application
    Zheqi Weng, Ning Yang, Shujun Shi, Zining Xu, Zixu Chen, Chen Liang, Xiuwei Zhang, Xingran Du
    Vaccines.2023; 12(1): 49.     CrossRef
  • Non-typeable Haemophilus influenzae major outer membrane protein P5 contributes to bacterial membrane stability, and affects the membrane protein composition crucial for interactions with the human host
    Yu-Ching Su, Mahendar Kadari, Megan L. Straw, Martina Janoušková, Sandra Jonsson, Oskar Thofte, Farshid Jalalvand, Erika Matuschek, Linda Sandblad, Ákos Végvári, Roman A. Zubarev, Kristian Riesbeck
    Frontiers in Cellular and Infection Microbiology.2023;[Epub]     CrossRef
  • Acinetobacter baumannii in the critically ill: complex infections get complicated
    Ilaria Cavallo, Alessandra Oliva, Rebecca Pages, Francesca Sivori, Mauro Truglio, Giorgia Fabrizio, Martina Pasqua, Fulvia Pimpinelli, Enea Gino Di Domenico
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Outer Membrane Porins Contribute to Antimicrobial Resistance in Gram-Negative Bacteria
    Gang Zhou, Qian Wang, Yingsi Wang, Xia Wen, Hong Peng, Ruqun Peng, Qingshan Shi, Xiaobao Xie, Liangqiu Li
    Microorganisms.2023; 11(7): 1690.     CrossRef
  • Deciphering the virulence factors, regulation, and immune response to Acinetobacter baumannii infection
    Afreen Shadan, Avik Pathak, Ying Ma, Ranjana Pathania, Rajnish Prakash Singh
    Frontiers in Cellular and Infection Microbiology.2023;[Epub]     CrossRef
  • Bacterial outer membrane vesicles provide an alternative pathway for trafficking of Escherichia coli O157 type III secreted effectors to epithelial cells
    Natalie Sirisaengtaksin, Eloise J. O'Donoghue, Sara Jabbari, Andrew J. Roe, Anne Marie Krachler, Craig D. Ellermeier
    mSphere.2023;[Epub]     CrossRef
  • Microbiota and plant-derived vesicles that serve as therapeutic agents and delivery carriers to regulate metabolic syndrome
    Guanting Niu, Tunyu Jian, Yanan Gai, Jian Chen
    Advanced Drug Delivery Reviews.2023; 196: 114774.     CrossRef
  • Bacterial extracellular vesicles and their interplay with the immune system
    Etienne Doré, Eric Boilard
    Pharmacology & Therapeutics.2023; 247: 108443.     CrossRef
  • An Explorative Review on Advanced Approaches to Overcome Bacterial Resistance by Curbing Bacterial Biofilm Formation
    F Mohamad, Raghad R Alzahrani, Ahlam Alsaadi, Bahauddeen M Alrfaei, Alaa Eldeen B Yassin, Manal M Alkhulaifi, Majed Halwani
    Infection and Drug Resistance.2023; Volume 16: 19.     CrossRef
  • The Two Faces of Bacterial Membrane Vesicles: Pathophysiological Roles and Therapeutic Opportunities
    Himadri B. Thapa, Stephan P. Ebenberger, Stefan Schild
    Antibiotics.2023; 12(6): 1045.     CrossRef
  • Bacterial outer membrane vesicles in cancer: Biogenesis, pathogenesis, and clinical application
    Deming Li, Lisi Zhu, Yuxiao Wang, Xiangyu Zhou, Yan Li
    Biomedicine & Pharmacotherapy.2023; 165: 115120.     CrossRef
  • Bacterial Outer Membrane Vesicles Promote Lung Inflammatory Responses and Macrophage Activation via Multi-Signaling Pathways
    Sunhyo Ryu, Kareemah Ni, Chenghao Wang, Ayyanar Sivanantham, Jonathan M. Carnino, Hong-Long Ji, Yang Jin
    Biomedicines.2023; 11(2): 568.     CrossRef
  • Vaccine development to control the rising scourge of antibiotic-resistant Acinetobacter baumannii: a systematic review
    Ravinder Singh, Neena Capalash, Prince Sharma
    3 Biotech.2022;[Epub]     CrossRef
  • Advances of bacteria-based delivery systems for modulating tumor microenvironment
    Shuping Li, Hua Yue, Shuang Wang, Xin Li, Xiaojun Wang, Peilin Guo, Guanghui Ma, Wei Wei
    Advanced Drug Delivery Reviews.2022; 188: 114444.     CrossRef
  • Engineered bacterial membrane vesicles are promising carriers for vaccine design and tumor immunotherapy
    Qiong Long, Peng Zheng, Xiao Zheng, Weiran Li, Liangqun Hua, Zhongqian Yang, Weiwei Huang, Yanbing Ma
    Advanced Drug Delivery Reviews.2022; 186: 114321.     CrossRef
  • Outer Membrane Vesicles of Acinetobacter baumannii DS002 Are Selectively Enriched with TonB-Dependent Transporters and Play a Key Role in Iron Acquisition
    Ganeshwari Dhurve, Ashok Kumar Madikonda, Medicharla Venkata Jagannadham, Dayananda Siddavattam, Ayush Kumar
    Microbiology Spectrum.2022;[Epub]     CrossRef
  • Peptidoglycan Recycling Promotes Outer Membrane Integrity and Carbapenem Tolerance in Acinetobacter baumannii
    Nowrosh Islam, Misha I. Kazi, Katie N. Kang, Jacob Biboy, Joe Gray, Feroz Ahmed, Richard D. Schargel, Cara C. Boutte, Tobias Dörr, Waldemar Vollmer, Joseph M. Boll, Vanessa Sperandio
    mBio.2022;[Epub]     CrossRef
  • Outer Membrane Vesicles: Biogenesis, Functions, and Issues
    Rokas Juodeikis, Simon R. Carding
    Microbiology and Molecular Biology Reviews.2022;[Epub]     CrossRef
  • Thioredoxin-mediated alteration of protein content and cytotoxicity of Acinetobacter baumannii outer membrane vesicles
    Swathi Shrihari, Holly C May, Jieh-Juen Yu, Sara B Papp, James P Chambers, M Neal Guentzel, Bernard P Arulanandam
    Experimental Biology and Medicine.2022; 247(3): 282.     CrossRef
  • Raman Microspectroscopy Imaging Analysis of Extracellular Vesicles Biogenesis by Filamentous Fungus Penicilium chrysogenum
    Ashok Zachariah Samuel, Shumpei Horii, Takuji Nakashima, Naoko Shibata, Masahiro Ando, Haruko Takeyama
    Advanced Biology.2022;[Epub]     CrossRef
  • The Discovery of the Role of Outer Membrane Vesicles against Bacteria
    Sofia Combo, Sérgio Mendes, Kaare Magne Nielsen, Gabriela Jorge da Silva, Sara Domingues
    Biomedicines.2022; 10(10): 2399.     CrossRef
  • Enhancement of Acinetobacter baumannii biofilm growth by cephem antibiotics via enrichment of protein and extracellular DNA in the biofilm matrices
    Kaoru Yamabe, Yukio Arakawa, Masaki Shoji, Katsushiro Miyamoto, Takahiro Tsuchiya, Katsuhiko Minoura, Yukihiro Akeda, Kazunori Tomono, Mitsuko Onda
    Journal of Applied Microbiology.2022; 133(3): 2002.     CrossRef
  • The role of Zur-regulated lipoprotein A in bacterial morphology, antimicrobial susceptibility, and production of outer membrane vesicles in Acinetobacter baumannii
    Nayeong Kim, Hyo Jeong Kim, Man Hwan Oh, Se Yeon Kim, Mi Hyun Kim, Joo Hee Son, Seung Il Kim, Minsang Shin, Yoo Chul Lee, Je Chul Lee
    BMC Microbiology.2021;[Epub]     CrossRef
  • Host immunity and cellular responses to bacterial outer membrane vesicles
    Varnesh Tiku, Man-Wah Tan
    Trends in Immunology.2021; 42(11): 1024.     CrossRef
  • Outer membrane vesicles mediated horizontal transfer of an aerobic denitrification gene between Escherichia coli
    Weichuan Qiao, Lianjie Wang, Yang Luo, Jiahui Miao
    Biodegradation.2021; 32(4): 435.     CrossRef
  • Comparative Analysis of Outer Membrane Vesicle Isolation Methods With an Escherichia coli tolA Mutant Reveals a Hypervesiculating Phenotype With Outer-Inner Membrane Vesicle Content
    Shelby L. Reimer, Daniel R. Beniac, Shannon L. Hiebert, Timothy F. Booth, Patrick M. Chong, Garrett R. Westmacott, George G. Zhanel, Denice C. Bay
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Engineered Remolding and Application of Bacterial Membrane Vesicles
    Li Qiao, Yifan Rao, Keting Zhu, Xiancai Rao, Renjie Zhou
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Inhibition of Virulence Factors and Biofilm Formation ofAcinetobacter Baumanniiby Naturally-derived and Synthetic Drugs
    Nilushi Indika Bamunuarachchi, Fazlurrahman Khan, Young-Mog Kim
    Current Drug Targets.2021; 22(7): 734.     CrossRef
  • Gut Microbiota Extracellular Vesicles as Signaling Molecules Mediating Host-Microbiota Communications
    Salma Sultan, Walid Mottawea, JuDong Yeo, Riadh Hammami
    International Journal of Molecular Sciences.2021; 22(23): 13166.     CrossRef
  • Mycobacterium tuberculosis extracellular vesicles: exploitation for vaccine technology and diagnostic methods
    Roghayeh Mohammadzadeh, Kiarash Ghazvini, Hadi Farsiani, Saman Soleimanpour
    Critical Reviews in Microbiology.2021; 47(1): 13.     CrossRef
  • Methoxy‐Substituted Hydroxychalcone Reduces Biofilm Production, Adhesion and Surface Motility of Acinetobacter baumannii by Inhibiting ompA Gene Expression
    Dušan Ušjak, Miroslav Dinić, Katarina Novović, Branka Ivković, Nenad Filipović, Magdalena Stevanović, Marina T. Milenković
    Chemistry & Biodiversity.2021;[Epub]     CrossRef
  • New Provisional Function of OmpA from Acinetobacter sp. Strain SA01 Based on Environmental Challenges
    Shahab Shahryari, Mahbubeh Talaee, Kamahldin Haghbeen, Lorenz Adrian, Hojatollah Vali, Hossein Shahbani Zahiri, Kambiz Akbari Noghabi, Jack A. Gilbert
    mSystems.2021;[Epub]     CrossRef
  • The extracellular vesicle generation paradox: a bacterial point of view
    Hannah M McMillan, Meta J Kuehn
    The EMBO Journal.2021;[Epub]     CrossRef
  • Bacteria- and host-derived extracellular vesicles – two sides of the same coin?
    Jeffrey S. Schorey, Yong Cheng, William R. McManus
    Journal of Cell Science.2021;[Epub]     CrossRef
  • INSIGHTS INTO THE VIRULENCE FACTORS OF ACINETOBACTER BAUMANNII AND THEIR ROLES IN PERSISTENCE AND INFECTIOUS PROCESS
    Al Shaikhli Nawfal Haitham, Irina Gheorghe, Andreea Gheorghe
    Romanian Archives of Microbiology and Immunology.2021; 80(2): 141.     CrossRef
  • Screening of small molecules attenuating biofilm formation of Acinetobacter baumannii by inhibition of ompA promoter activity
    Seok Hyeon Na, Hyejin Jeon, Man Hwan Oh, Yoo Jeong Kim, Je Chul Lee
    Journal of Microbiology.2021; 59(9): 871.     CrossRef
  • Membrane Vesicle Production as a Bacterial Defense Against Stress
    Negar Mozaheb, Marie-Paule Mingeot-Leclercq
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Extracellular Vesicles: An Overlooked Secretion System in Cyanobacteria
    Steeve Lima, Jorge Matinha-Cardoso, Paula Tamagnini, Paulo Oliveira
    Life.2020; 10(8): 129.     CrossRef
  • The Outer Membrane Proteins OmpA, CarO, and OprD of Acinetobacter baumannii Confer a Two-Pronged Defense in Facilitating Its Success as a Potent Human Pathogen
    Siva R. Uppalapati, Abhiroop Sett, Ranjana Pathania
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Microevolution in the major outer membrane protein OmpA of Acinetobacter baumannii
    Alejandro M. Viale, Benjamin A. Evans
    Microbial Genomics .2020;[Epub]     CrossRef
  • Small RNAs in Outer Membrane Vesicles and Their Function in Host-Microbe Interactions
    Sara Ahmadi Badi, Stefania Paola Bruno, Arfa Moshiri, Samira Tarashi, Seyed Davar Siadat, Andrea Masotti
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Engineered Bacterial Outer Membrane Vesicles as Multifunctional Delivery Platforms
    Ruizhen Li, Qiong Liu
    Frontiers in Materials.2020;[Epub]     CrossRef
  • Outer Membrane Lipid Secretion and the Innate Immune Response to Gram-Negative Bacteria
    Nicole P. Giordano, Melina B. Cian, Zachary D. Dalebroux, Anthony R. Richardson
    Infection and Immunity.2020;[Epub]     CrossRef
  • The Role of Bacterial Membrane Vesicles in the Dissemination of Antibiotic Resistance and as Promising Carriers for Therapeutic Agent Delivery
    Md Jalal Uddin, Jirapat Dawan, Gibeom Jeon, Tao Yu, Xinlong He, Juhee Ahn
    Microorganisms.2020; 8(5): 670.     CrossRef
  • The Mutation of Conservative Asp268 Residue in the Peptidoglycan-Associated Domain of the OmpA Protein Affects Multiple Acinetobacter baumannii Virulence Characteristics
    Jūratė Skerniškytė, Emilija Karazijaitė, Julien Deschamps, Renatas Krasauskas, Romain Briandet, Edita Sužiedėlienė
    Molecules.2019; 24(10): 1972.     CrossRef
  • Role of OmpA1 and OmpA2 in Aggregatibacter actinomycetemcomitans and Aggregatibacter aphrophilus serum resistance
    Mark Lindholm, Kyaw Min Aung, Sun Nyunt Wai, Jan Oscarsson
    Journal of Oral Microbiology.2019; 11(1): 1536192.     CrossRef
  • Studies on the mechanism of multidrug resistance of Acinetobacter baumannii by proteomic analysis of the outer membrane vesicles of the bacterium
    Bina Agarwal, Raman Karthikeyan, P. Gayathri, B. RameshBabu, G. Ahmed, M. V. Jagannadham
    Journal of Proteins and Proteomics.2019; 10(1): 1.     CrossRef
  • Toll-Like Receptors 2 and 4 Modulate Pulmonary Inflammation and Host Factors Mediated by Outer Membrane Vesicles Derived from Acinetobacter baumannii
    Chad R. Marion, Jaewook Lee, Lokesh Sharma, Kyong-Su Park, Changjin Lee, Wei Liu, Pei Liu, Jingjing Feng, Yong Song Gho, Charles S. Dela Cruz, Vincent B. Young
    Infection and Immunity.2019;[Epub]     CrossRef
  • The sensor kinase BfmS controls production of outer membrane vesicles in Acinetobacter baumannii
    Se Yeon Kim, Mi Hyun Kim, Seung Il Kim, Joo Hee Son, Shukho Kim, Yoo Chul Lee, Minsang Shin, Man Hwan Oh, Je Chul Lee
    BMC Microbiology.2019;[Epub]     CrossRef
  • The Mechanisms of Disease Caused by Acinetobacter baumannii
    Faye C. Morris, Carina Dexter, Xenia Kostoulias, Muhammad Ikhtear Uddin, Anton Y. Peleg
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Human pleural fluid triggers global changes in the transcriptional landscape of Acinetobacter baumannii as an adaptive response to stress
    Jasmine Martinez, Jennifer S. Fernandez, Christine Liu, Amparo Hoard, Anthony Mendoza, Jun Nakanouchi, Nyah Rodman, Robert Courville, Marisel R. Tuttobene, Carolina Lopez, Lisandro J. Gonzalez, Parvin Shahrestani, Krisztina M. Papp-Wallace, Alejandro J. V
    Scientific Reports.2019;[Epub]     CrossRef
  • Synergistic activity of an OmpA inhibitor and colistin against colistin-resistant Acinetobacter baumannii: mechanistic analysis and in vivo efficacy
    Raquel Parra-Millán, Xavier Vila-Farrés, Rafael Ayerbe-Algaba, Monica Varese, Viviana Sánchez-Encinales, Nuría Bayó, María Eugenia Pachón-Ibáñez, Meritxell Teixidó, Jordi Vila, Jerónimo Pachón, Ernest Giralt, Younes Smani
    Journal of Antimicrobial Chemotherapy.2018;[Epub]     CrossRef
  • Acinetobacter : an emerging pathogen with a versatile secretome
    Noha M. Elhosseiny, Ahmed S. Attia
    Emerging Microbes & Infections.2018; 7(1): 1.     CrossRef
  • Gram-negative bacterial membrane vesicle release in response to the host-environment: different threats, same trick?
    Charlotte Volgers, Paul H. M. Savelkoul, Frank R. M. Stassen
    Critical Reviews in Microbiology.2018; 44(3): 258.     CrossRef
  • Versatile effects of bacterium-released membrane vesicles on mammalian cells and infectious/inflammatory diseases
    You-jiang Yu, Xiao-hong Wang, Guo-Chang Fan
    Acta Pharmacologica Sinica.2018; 39(4): 514.     CrossRef
  • Tug of war betweenAcinetobacter baumanniiand host immune responses
    Fei-Ju Li, Lora Starrs, Gaetan Burgio
    Pathogens and Disease.2018;[Epub]     CrossRef
  • Outer Membrane Vesicles (OMVs) of Gram-negative Bacteria: A Perspective Update
    Arif Tasleem Jan
    Frontiers in Microbiology.2017;[Epub]     CrossRef
  • The Secrets of Acinetobacter Secretion
    Brent S. Weber, Rachel L. Kinsella, Christian M. Harding, Mario F. Feldman
    Trends in Microbiology.2017; 25(7): 532.     CrossRef
  • Biology of Acinetobacter baumannii: Pathogenesis, Antibiotic Resistance Mechanisms, and Prospective Treatment Options
    Chang-Ro Lee, Jung Hun Lee, Moonhee Park, Kwang Seung Park, Il Kwon Bae, Young Bae Kim, Chang-Jun Cha, Byeong Chul Jeong, Sang Hee Lee
    Frontiers in Cellular and Infection Microbiology.2017;[Epub]     CrossRef
  • LPS Remodeling Triggers Formation of Outer Membrane Vesicles in Salmonella
    Wael Elhenawy, Michael Bording-Jorgensen, Ezequiel Valguarnera, M. Florencia Haurat, Eytan Wine, Mario F. Feldman, John J. Mekalanos
    mBio.2016;[Epub]     CrossRef
  • Pangenome and immuno-proteomics analysis of Acinetobacter baumannii strains revealed the core peptide vaccine targets
    Afreenish Hassan, Anam Naz, Ayesha Obaid, Rehan Zafar Paracha, Kanwal Naz, Faryal Mehwish Awan, Syed Aun Muhmmad, Hussnain Ahmed Janjua, Jamil Ahmad, Amjad Ali
    BMC Genomics.2016;[Epub]     CrossRef
  • Proteomic profiling of Gram‐negative bacterial outer membrane vesicles: Current perspectives
    Jaewook Lee, Oh Youn Kim, Yong Song Gho
    PROTEOMICS – Clinical Applications.2016; 10(9-10): 897.     CrossRef
  • Outer membrane Protein A plays a role in pathogenesis ofAcinetobacter nosocomialis
    Sang Woo Kim, Man Hwan Oh, So Hyun Jun, Hyejin Jeon, Seung Il Kim, Kwangho Kim, Yoo Chul Lee, Je Chul Lee
    Virulence.2016; 7(4): 413.     CrossRef
  • Bacterial membrane vesicles: Biogenesis, immune regulation and pathogenesis
    Rishi D. Pathirana, Maria Kaparakis-Liaskos
    Cellular Microbiology.2016; 18(11): 1518.     CrossRef
  • Membrane Vesicles Released by a hypervesiculating Escherichia coli Nissle 1917 tolR Mutant Are Highly Heterogeneous and Show Reduced Capacity for Epithelial Cell Interaction and Entry
    Carla Pérez-Cruz, María-Alexandra Cañas, Rosa Giménez, Josefa Badia, Elena Mercade, Laura Baldomà, Laura Aguilera, Maria Kaparakis-Liaskos
    PLOS ONE.2016; 11(12): e0169186.     CrossRef
  • Outer membrane vesicles of Lysobacter sp. XL1: biogenesis, functions, and applied prospects
    Irina V. Kudryakova, Nina A. Shishkova, Natalia V. Vasilyeva
    Applied Microbiology and Biotechnology.2016; 100(11): 4791.     CrossRef
  • Immunization with a 22-kDa outer membrane protein elicits protective immunity to multidrug-resistant Acinetobacter baumannii
    Weiwei Huang, Yufeng Yao, Shijie Wang, Ye Xia, Xu Yang, Qiong Long, Wenjia Sun, Cunbao Liu, Yang Li, Xiaojie Chu, Hongmei Bai, Yueting Yao, Yanbing Ma
    Scientific Reports.2016;[Epub]     CrossRef
  • Bacterial outer membrane vesicles: New insights and applications
    Deepak Anand, Arunima Chaudhuri
    Molecular Membrane Biology.2016; 33(6-8): 125.     CrossRef
  • Pathogenic Acinetobacter: from the Cell Surface to Infinity and Beyond
    Brent S. Weber, Christian M. Harding, Mario F. Feldman, W. Margolin
    Journal of Bacteriology.2016; 198(6): 880.     CrossRef
  • Biogenesis ofLysobactersp. XL1 vesicles
    Irina V. Kudryakova, Natalia E. Suzina, Natalia V. Vasilyeva, Klaus Hantke
    FEMS Microbiology Letters.2015; 362(18): fnv137.     CrossRef
  • Roles of bacterial membrane vesicles
    Eric Daniel Avila-Calderón, Minerva Georgina Araiza-Villanueva, Juan Carlos Cancino-Diaz, Edgar Oliver López-Villegas, Nammalwar Sriranganathan, Stephen M. Boyle, Araceli Contreras-Rodríguez
    Archives of Microbiology.2015; 197(1): 1.     CrossRef
  • Outer-membrane vesicles from Gram-negative bacteria: biogenesis and functions
    Carmen Schwechheimer, Meta J. Kuehn
    Nature Reviews Microbiology.2015; 13(10): 605.     CrossRef
  • OmpA Binding Mediates the Effect of Antimicrobial Peptide LL-37 on Acinetobacter baumannii
    Ming-Feng Lin, Pei-Wen Tsai, Jeng-Yi Chen, Yun-You Lin, Chung-Yu Lan, Surajit Bhattacharjya
    PLOS ONE.2015; 10(10): e0141107.     CrossRef
  • Bacterial outer membrane nanovesicles: Structure, biogenesis, functions, and application in biotechnology and medicine (Review)
    K. A. Lusta
    Applied Biochemistry and Microbiology.2015; 51(5): 485.     CrossRef
  • Outer membrane vesicles as platform vaccine technology
    Leo van der Pol, Michiel Stork, Peter van der Ley
    Biotechnology Journal.2015; 10(11): 1689.     CrossRef
  • Modulation of bacterial outer membrane vesicle production by envelope structure and content
    Carmen Schwechheimer, Adam Kulp, Meta J Kuehn
    BMC Microbiology.2014;[Epub]     CrossRef
  • Gene Transfer Potential of Outer Membrane Vesicles of Acinetobacter baylyi and Effects of Stress on Vesiculation
    Shweta Fulsundar, Klaus Harms, Gøril E. Flaten, Pål J. Johnsen, Balu Ananda Chopade, Kaare M. Nielsen, M. Kivisaar
    Applied and Environmental Microbiology.2014; 80(11): 3469.     CrossRef
  • Acinetobacter baumannii Outer Membrane Vesicles Elicit a Potent Innate Immune Response via Membrane Proteins
    So Hyun Jun, Jung Hwa Lee, Bo Ra Kim, Seung Il Kim, Tae In Park, Je Chul Lee, Yoo Chul Lee, Özlem Yilmaz
    PLoS ONE.2013; 8(8): e71751.     CrossRef
  • Molecular paleontology and complexity in the last eukaryotic common ancestor
    V. Lila Koumandou, Bill Wickstead, Michael L. Ginger, Mark van der Giezen, Joel B. Dacks, Mark C. Field
    Critical Reviews in Biochemistry and Molecular Biology.2013; 48(4): 373.     CrossRef
  • Host-microbe interactions that shape the pathogenesis ofAcinetobacter baumanniiinfection
    Brittany L. Mortensen, Eric P. Skaar
    Cellular Microbiology.2012; 14(9): 1336.     CrossRef
Journal Article
Effects of Lactobacillus gasseri BNR17 on Body Weight and Adipose Tissue Mass in Diet-Induced Overweight Rats
Ji-Hee Kang , Sung-Il Yun , Han-Oh Park
J. Microbiol. 2010;48(5):712-714.   Published online November 3, 2010
DOI: https://doi.org/10.1007/s12275-010-0363-8
  • 1,516 View
  • 3 Download
  • 98 Crossref
AbstractAbstract PDF
We investigated the weight-gain suppressive effect of Lactobacillus gasseri BNR17 isolated from human breast milk. Rats were fed a high-carbohydrate diet and administered BNR17 (BNR17 group) twice daily for twelve weeks. Changes were observed in body weight and white adipose tissue mass. The percent increase in body weight (P=0.0331) and fat pad mass (P<0.01) was significantly lower in the BNR17 group, and the FER was moderately lower (P=0.0769). These data suggest that BNR17 can prevent diet-induced overweight and may become an alternative method for treating weight problems and obesity.

Citations

Citations to this article as recorded by  
  • Effect of Bacillus subtilis BS-Z15 metabolite mycosubtilin on body weight gain in mice
    Jun Yang, Jing-Jing Zhao, Jun-Qi Yue, Ming-Yue Ma, Huan Liu, Jia-Yi Chen, Xi-Yuan Cao, Hao-Ran Li, He-Ping Zhao, Yi Yang, Hui-Xin Zhao
    Frontiers in Microbiomes.2024;[Epub]     CrossRef
  • Unraveling the Puzzle: Health Benefits of Probiotics—A Comprehensive Review
    Sabiha Gul, Emanuele Durante-Mangoni
    Journal of Clinical Medicine.2024; 13(5): 1436.     CrossRef
  • Lactobacillus gasseri BNR17 Ameliorates Dexamethasone-Induced Muscle Loss in BALB/c Mice and C2C12 Myotubes
    Hyeon-Yeong Lee, Jongkyu Lee, Hyemi Lim, Hye-Young Kim, Yeon-Su Koo, Ji-Su Lim, Yoosik Yoon
    Journal of Medicinal Food.2024; 27(5): 385.     CrossRef
  • Anti-Obesity Effect of Lactobacillus acidophilus DS0079 (YBS1) by Inhibition of Adipocyte Differentiation through Regulation of p38 MAPK/PPARγ Signaling
    Youri Lee, Navid Iqbal, Mi-Hwa Lee, Doo-Sang Park, Yong-Sik Kim
    Journal of Microbiology and Biotechnology.2024; 34(5): 1073.     CrossRef
  • Exploration of Antidiabetic, Cholesterol-Lowering, and Anticancer Upshot of Probiotic Bacterium Pediococcus pentosaceus OBK05 Strain of Buttermilk
    Kiran Kumar Bhukya, Bhima Bhukya
    Probiotics and Antimicrobial Proteins.2023; 15(6): 1484.     CrossRef
  • Effects of Lactobacillus acidophilus administration to anorexigenic neuropeptides and some biochemical parameters on rats fed with a high-fat diet
    Berna Çayli, Gülay Çiftci, Alper Çiftci, Sadık Savaşan
    Prostaglandins & Other Lipid Mediators.2023; 166: 106729.     CrossRef
  • Triangulating nutrigenomics, metabolomics and microbiomics toward personalized nutrition and healthy living
    George Lagoumintzis, George P. Patrinos
    Human Genomics.2023;[Epub]     CrossRef
  • Effects of Bacillus subtilis BS-Z15 on Intestinal Microbiota Structure and Body Weight Gain in Mice
    Jun Yang, Huan-Chen Ning, Qi Zhang, Jun-Qi Yue, Xi-Yuan Cao, Jin-Yu Li, Ling Liu, He-Ping Zhao, Hui-Xin Zhao
    Probiotics and Antimicrobial Proteins.2023; 15(3): 706.     CrossRef
  • Amelioration of Type 2 Diabetes Using Four Strains of Lactobacillus Probiotics: Effects on Gut Microbiota Reconstitution-Mediated Regulation of Glucose Homeostasis, Inflammation, and Oxidative Stress in Mice
    Hainan Song, Hui Xue, Zeng Zhang, Jun Wang, Ao Li, Jiachao Zhang, Pengfei Luo, Meng Zhan, Xiaoli Zhou, Lihao Chen, Yajing Fang
    Journal of Agricultural and Food Chemistry.2023; 71(51): 20801.     CrossRef
  • The Neurobiology of Eating Behavior in Obesity: Mechanisms and Therapeutic Targets: A Report from the 23rd Annual Harvard Nutrition Obesity Symposium
    Imen Becetti, Esther L Bwenyi, Ivan E de Araujo, Jamy Ard, John F Cryan, Ismaa Sadaf Farooqi, Carrie R Ferrario, Marci E Gluck, Laura M Holsen, Paul J Kenny, Elizabeth A Lawson, Bradford B Lowell, Ellen A Schur, Takara L Stanley, Ali Tavakkoli, Steven K G
    The American Journal of Clinical Nutrition.2023; 118(1): 314.     CrossRef
  • Identification of food and nutrient components as predictors of Lactobacillus colonization
    Sharon C. Thompson, Amanda L. Ford, Elijah J. Moothedan, Lauren S. Stafford, Timothy J. Garrett, Wendy J. Dahl, Ana Conesa, Claudio F. Gonzalez, Graciela L. Lorca
    Frontiers in Nutrition.2023;[Epub]     CrossRef
  • Milk Fermented with Pediococcus acidilactici Strain BE Improves High Blood Glucose Levels and Pancreatic Beta-Cell Function in Diabetic Rats
    Widodo Widodo, Hanna Respati Putri Kusumaningrum, Hevi Wihadmadyatami, Anggi Lukman Wicaksana
    Food Science of Animal Resources.2023; 43(1): 170.     CrossRef
  • Effects of synbiotic supplementation on anthropometric indices and body composition in overweight or obese children and adolescents: a randomized, double-blind, placebo-controlled clinical trial
    Mohammad Amin Atazadegan, Motahar Heidari-Beni, Mohammad Hassan Entezari, Fariborz Sharifianjazi, Roya Kelishadi
    World Journal of Pediatrics.2023; 19(4): 356.     CrossRef
  • The effect of probiotic and synbiotic supplementation on appetite-regulating hormones and desire to eat: A systematic review and meta-analysis of clinical trials
    Morvarid Noormohammadi, Zeinab Ghorbani, Ulrike Löber, Marjan Mahdavi-Roshan, Theda U.P. Bartolomaeus, Asma Kazemi, Nargeskhatoon Shoaibinobarian, Sofia K. Forslund
    Pharmacological Research.2023; 187: 106614.     CrossRef
  • The fecal microbiota from children with autism impact gut metabolism and learning and memory abilities of honeybees
    Yiyuan Li, Yan Zhang, Xi Luo, Yujie Meng, Zhaopeng Zhong, Hao Zheng, Yunsheng Yang
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Microbiota: A potential orchestrator of antidiabetic therapy
    Bingyao Liu, Linlin Zhang, Hang Yang, Hongting Zheng, Xiaoyu Liao
    Frontiers in Endocrinology.2023;[Epub]     CrossRef
  • Combined effects of yacon flour and probiotic yogurt on the metabolic parameters and inflammatory and insulin signaling proteins in high‐fat‐diet‐induced obese mice
    Juciane de Abreu Ribeiro Pereira, Maria de Fátima Píccolo Barcelos, Eduardo Valério Villas Boas, Roberta Hilsdorf Píccoli, Janina de Sales Guilarducci, Rafaela Corrêa Pereira, José Rodrigo Pauli, Eric Batista Ferreira, Michel Cardoso de Angelis‐Pereira, D
    Journal of the Science of Food and Agriculture.2022; 102(15): 7293.     CrossRef
  • Evaluating the Nutritional and Immune Potentiating Characteristics of Unfermented and Fermented Turmeric Camel Milk in Cyclophosphamide-Induced Immunosuppression in Rats
    Thamer Aljutaily
    Antioxidants.2022; 11(4): 792.     CrossRef
  • Lactobacillus rhamnosus Strain LRH05 Intervention Ameliorated Body Weight Gain and Adipose Inflammation via Modulating the Gut Microbiota in High‐Fat Diet‐Induced Obese Mice
    Yung‐Tsung Chen, Shiou‐Yun Chiou, Ai‐Hua Hsu, Yu‐Chun Lin, Jin‐Seng Lin
    Molecular Nutrition & Food Research.2022;[Epub]     CrossRef
  • Effects of Synbiotic Preparation Containing Lactobacillus gasseri BNR17 on Body Fat in Obese Dogs: A Pilot Study
    Han-Joon Lee, Jae Hyoung Cho, Woo-Jae Cho, Seong-Ho Gang, Seung-Hwan Park, Bong-Jun Jung, Hyeun Bum Kim, Kun Ho Song
    Animals.2022; 12(5): 642.     CrossRef
  • Application of machine learning tools: Potential and useful approach for the prediction of type 2 diabetes mellitus based on the gut microbiome profile
    Xiaochun Ge, Aimin Zhang, Lihui Li, Qitian Sun, Jianqiu He, Yu Wu, Rundong Tan, Yingxia Pan, Jiangman Zhao, Yue Xu, Hui Tang, Yu Gao
    Experimental and Therapeutic Medicine.2022;[Epub]     CrossRef
  • Molecular Study of Lactobacilli Species in Patients with Type 2 Diabetes Mellitus
    Amr Mohamed El-Sabbagh, Maysaa El Sayed Zaki, Mohamad Mohsen Motawea, Nashwa M. Alkasaby
    The Open Microbiology Journal.2022;[Epub]     CrossRef
  • Effect of Intermittent Fasting, Probiotic-Fermented Camel Milk, and Probiotic-Fermented Camel Milk Incorporating Sukkari Date on Diet-Induced Obesity in Rats
    Thamer Aljutaily, Medhat Rehan, Mahmoud M. A. Moustafa, Hassan Barakat
    Fermentation.2022; 8(11): 619.     CrossRef
  • Personalized nutrition, microbiota, and metabolism: A triad for eudaimonia
    Muhammad Hassan Sarfraz, Aqsa Shahid, Samra Asghar, Bilal Aslam, Usman Ali Ashfaq, Hammad Raza, Miguel A. Prieto, Jesus Simal-Gandara, Francisco J. Barba, Muhammad Shahid Riaz Rajoka, Mohsin Khurshid, Abdulqadir J. Nashwan
    Frontiers in Molecular Biosciences.2022;[Epub]     CrossRef
  • Antibiotic Followed by a Potential Probiotic Increases Brown Adipose Tissue, Reduces Biometric Measurements, and Changes Intestinal Microbiota Phyla in Obesity
    Mariana de Moura e Dias, Sandra Aparecida dos Reis Louzano, Lisiane Lopes da Conceição, Rayssa da Conceição Fernandes, Tiago Antônio de Oliveira Mendes, Solange Silveira Pereira, Leandro Licursi de Oliveira, Maria do Carmo Gouveia Peluzio
    Probiotics and Antimicrobial Proteins.2021; 13(6): 1621.     CrossRef
  • AB-Kefir Reduced Body Weight and Ameliorated Inflammation in Adipose Tissue of Obese Mice Fed a High-Fat Diet, but Not a High-Sucrose Diet
    Yung-Tsung Chen, Ai-Hua Hsu, Shiou-Yun Chiou, Yu-Chun Lin, Jin-Seng Lin
    Nutrients.2021; 13(7): 2182.     CrossRef
  • Enterococcus faecium R0026 Combined with Bacillus subtilis R0179 Prevent Obesity-Associated Hyperlipidemia and Modulate Gut Microbiota in C57BL/6 Mice
    Jinli Huang, Juan Huang, Tianyi Yin, Huiyun Lv, Pengyu Zhang, Huajun Li
    Journal of Microbiology and Biotechnology.2021; 31(2): 181.     CrossRef
  • Targeting the Gut Microbiota for Remediating Obesity and Related Metabolic Disorders
    Botao Wang, Linlin Wang, Haojue Wang, Hongyan Dai, Xianyi Lu, Yuan-kun Lee, Zhennan Gu, Jianxin Zhao, Hao Zhang, Wei Chen, Gang Wang
    The Journal of Nutrition.2021; 151(7): 1703.     CrossRef
  • Obesity as the 21st Century's major disease: The role of probiotics and prebiotics in prevention and treatment
    Michał Włodarczyk, Katarzyna Śliżewska
    Food Bioscience.2021; 42: 101115.     CrossRef
  • Effects of 60-Day Saccharomyces boulardii and Superoxide Dismutase Supplementation on Body Composition, Hunger Sensation, Pro/Antioxidant Ratio, Inflammation and Hormonal Lipo-Metabolic Biomarkers in Obese Adults: A Double-Blind, Placebo-Controlled Trial
    Mariangela Rondanelli, Niccolò Miraglia, Pietro Putignano, Ignazio Castagliuolo, Paola Brun, Stefano Dall’Acqua, Gabriella Peroni, Milena Anna Faliva, Maurizio Naso, Mara Nichetti, Vittoria Infantino, Simone Perna
    Nutrients.2021; 13(8): 2512.     CrossRef
  • Therapeutic and Improving Function of Lactobacilli in the Prevention and Treatment of Cardiovascular-Related Diseases: A Novel Perspective From Gut Microbiota
    Xin Zhao, Xinqin Zhong, Xiao Liu, Xiaoying Wang, Xiumei Gao
    Frontiers in Nutrition.2021;[Epub]     CrossRef
  • Nutritional and Health Potential of Probiotics: A Review
    Muhammad Modassar Ali Nawaz Ranjha, Bakhtawar Shafique, Maria Batool, Przemysław Łukasz Kowalczewski, Qayyum Shehzad, Muhammad Usman, Muhammad Faisal Manzoor, Syeda Mahvish Zahra, Shazia Yaqub, Rana Muhammad Aadil
    Applied Sciences.2021; 11(23): 11204.     CrossRef
  • Lactobacillus fermentum MCC2759 and MCC2760 Alleviate Inflammation and Intestinal Function in High-Fat Diet-Fed and Streptozotocin-Induced Diabetic Rats
    Ann Catherine Archer, Serva Peddha Muthukumar, Prakash Motiram Halami
    Probiotics and Antimicrobial Proteins.2021; 13(4): 1068.     CrossRef
  • Anti-obesity effects of α-amylase inhibitor enriched-extract from white common beans (Phaseolus vulgaris L.) associated with the modulation of gut microbiota composition in high-fat diet-induced obese rats
    Zhenxing Shi, Yingying Zhu, Cong Teng, Yang Yao, Guixing Ren, Aurore Richel
    Food & Function.2020; 11(2): 1624.     CrossRef
  • Cholesterol homeostasis associated with probiotic supplementation in vivo
    P.S. Lim, C.F. Loke, Y.W. Ho, H.Y. Tan
    Journal of Applied Microbiology.2020; 129(5): 1374.     CrossRef
  • Evaluation of Microbiota and Weight Alterations After the Administration of Tetracycline and Lactobacillus gasseri in Rats
    Fernando S. Olimpio, Fernando Sa Del Fiol, Renata Lima, Karina S. Rosa, Guilherme A. Roque, Cintia V. Santos, John Piletz
    Current Microbiology.2020; 77(9): 2449.     CrossRef
  • The probioticL. caseiLC-XCAL™ improves metabolic health in a diet-induced obesity mouse model without altering the microbiome
    Calum J. Walsh, Selena Healy, Paul W. O’Toole, Eileen F. Murphy, Paul D. Cotter
    Gut Microbes.2020; 12(1): 1747330.     CrossRef
  • Microbiota Changes Due to Grape Seed Extract Diet Improved Intestinal Homeostasis and Decreased Fatness in Parental Broiler Hens
    Jeremy Grandhaye, Veronique Douard, Ana Rodriguez-Mateos, Yifan Xu, Alex Cheok, Antonella Riva, Rodrigo Guabiraba, Olivier Zemb, Catherine Philippe, Magali Monnoye, Christophe Staub, Eric Venturi, Alix Barbe, Christelle Ramé, Joelle Dupont, Pascal Froment
    Microorganisms.2020; 8(8): 1141.     CrossRef
  • Enterococcus hirae WEHI01 isolated from a healthy Chinese infant ameliorates the symptoms of type 2 diabetes by elevating the abundance of Lactobacillales in rats
    Min Wei, Enyu Gu, Jie Luo, Zhihong Zhang, Di Xu, Xueying Tao, Nagendra P. Shah, Hua Wei
    Journal of Dairy Science.2020; 103(4): 2969.     CrossRef
  • Probiotic characteristics of Lactobacillus plantarum E680 and its effect on Hypercholesterolemic mice
    Zhi-yao Zheng, Fei-Wei Cao, Wei-jun Wang, Jing Yu, Chen Chen, Bo Chen, Jian-xin Liu, Jenni Firrman, John Renye, Da-xi Ren
    BMC Microbiology.2020;[Epub]     CrossRef
  • Light at night affects gut microbial community and negatively impacts host physiology in diurnal animals: Evidence from captive zebra finches
    Indu Malik, Twinkle Batra, Subhajit Das, Vinod Kumar
    Microbiological Research.2020; 241: 126597.     CrossRef
  • Physiological Characteristics and Anti-Obesity Effect of Milk Fermented by Lactobacillus plantarum KI134
    Seulki Kim, Sang-Dong Lim
    Journal of Dairy Science and Biotechnology.2020; 38(4): 207.     CrossRef
  • Probiotics: How Effective Are They in the Fight against Obesity?
    Kiran Mazloom, Imran Siddiqi, Mihai Covasa
    Nutrients.2019; 11(2): 258.     CrossRef
  • Probiotics supplementation for the obesity management; A systematic review of animal studies and clinical trials
    Hanieh-Sadat Ejtahed, Pooneh Angoorani, Ahmad-Reza Soroush, Rasha Atlasi, Shirin Hasani-Ranjbar, Amir M. Mortazavian, Bagher Larijani
    Journal of Functional Foods.2019; 52: 228.     CrossRef
  • Gut Microbiota and Antipsychotics Induced Metabolic Alteration
    Dong-Yu Kan, Su-Juan Li, Chen-Chen Liu, Ren-Rong Wu
    Global Clinical and Translational Research.2019; : 131.     CrossRef
  • Amelioration of obesity-related characteristics by a probiotic formulation in a high-fat diet-induced obese rat model
    Joo-Hyun Shin, Myung Hee Nam, Hyerim Lee, Joong-Su Lee, Hojun Kim, Myung-Jun Chung, Jae-Gu Seo
    European Journal of Nutrition.2018; 57(6): 2081.     CrossRef
  • Lactobacillus gasseri BNR17 Supplementation Reduces the Visceral Fat Accumulation and Waist Circumference in Obese Adults: A Randomized, Double-Blind, Placebo-Controlled Trial
    Joohee Kim, Jae Moon Yun, Mi Kyung Kim, Oran Kwon, Belong Cho
    Journal of Medicinal Food.2018; 21(5): 454.     CrossRef
  • Effect of Lactobacillus gasseri BNR17 on irritable bowel syndrome: a randomized, double-blind, placebo-controlled, dose-finding trial
    Ji Yeon Kim, Yeo Jin Park, Hyo Jin Lee, Min Young Park, Oran Kwon
    Food Science and Biotechnology.2018; 27(3): 853.     CrossRef
  • Effects of Synbiotics on Anthropometric Indices of Obesity in Children
    Hamid Reza Kianifar, Hamid Ahanchian, Mohammad Safarian, Asma Javid, Alireza Farsad-Naeimi, Seyed Ali Jafari, Mohammad Ali kiani, Monireh Dahri
    Topics in Clinical Nutrition.2018; 33(2): 118.     CrossRef
  • A double blind, placebo-controlled, randomized clinical trial that breast milk derived-Lactobacillus gasseri BNR17 mitigated diarrhea-dominant irritable bowel syndrome
    Suk Pyo Shin, Yoon Mi Choi, Won Hee Kim, Sung Pyo Hong, Jong-Min Park, Joohee Kim, Oran Kwon, Eun Hyun Lee, Ki Baik Hahm
    Journal of Clinical Biochemistry and Nutrition.2018; 62(2): 179.     CrossRef
  • Dose-Dependent Effects of Multispecies Probiotic Supplementation on the Lipopolysaccharide (LPS) Level and Cardiometabolic Profile in Obese Postmenopausal Women: A 12-Week Randomized Clinical Trial
    Monika Szulińska, Igor Łoniewski, Saskia Van Hemert, Magdalena Sobieska, Paweł Bogdański
    Nutrients.2018; 10(6): 773.     CrossRef
  • Microbiome in connection with metabolic syndrome and the therapeutic potential of its influencing
    Miriam Tutková, Jana Rudá-Kučerová
    Česká a slovenská farmacie.2018; 67(2): 71.     CrossRef
  • Exercise and Dietary Factors Affecting the Microbiota: Current Knowledge and Future Perspectives
    Flor Elisa Morales Marroquín
    Journal of Nutritional Health & Food Engineering.2017;[Epub]     CrossRef
  • Can probiotics modulate human disease by impacting intestinal barrier function?
    Peter A. Bron, Michiel Kleerebezem, Robert-Jan Brummer, Patrice D. Cani, Annick Mercenier, Thomas T. MacDonald, Clara L. Garcia-Ródenas, Jerry M. Wells
    British Journal of Nutrition.2017; 117(1): 93.     CrossRef
  • Changes in weight and body fat after use of tetracycline and Lactobacillus gasseri in rats
    Jorge José Marciano, Fernando de Sá Del Fiol, Alessandra Cristina Marciano Tardelli Ferreira, Maria Cláudia Marques, Luciane Lopes Santana
    Brazilian Journal of Pharmaceutical Sciences.2017;[Epub]     CrossRef
  • Screening for lactic acid bacteria in traditional fermented Tibetan yak milk and evaluating their probiotic and cholesterol-lowering potentials in rats fed a high-cholesterol diet
    Wurong Ding, Chao Shi, Ming Chen, Jianwei Zhou, Ruijun Long, Xusheng Guo
    Journal of Functional Foods.2017; 32: 324.     CrossRef
  • Effects of Acarbose on the Gut Microbiota of Prediabetic Patients: A Randomized, Double-blind, Controlled Crossover Trial
    Xiuying Zhang, Zhiwei Fang, Chunfang Zhang, Huihua Xia, Zhuye Jie, Xueyao Han, Yingli Chen, Linong Ji
    Diabetes Therapy.2017; 8(2): 293.     CrossRef
  • Obesity and microbiota: an example of an intricate relationship
    Sabrina Duranti, Chiara Ferrario, Douwe van Sinderen, Marco Ventura, Francesca Turroni
    Genes & Nutrition.2017;[Epub]     CrossRef
  • The ameliorative effects of probiotic Lactobacillus fermentum strain RS-2 on alloxan induced diabetic rats
    Narendra Kumar, Sudhir Kumar Tomar, Kiran Thakur, Ashish Kumar Singh
    Journal of Functional Foods.2017; 28: 275.     CrossRef
  • Effect of Lactobacillus on body weight and body fat in overweight subjects: a systematic review of randomized controlled clinical trials
    L Crovesy, M Ostrowski, D M T P Ferreira, E L Rosado, M Soares-Mota
    International Journal of Obesity.2017; 41(11): 1607.     CrossRef
  • Anti-obesity Effect of Yogurt Fermented by Lactobacillus plantarum Q180 in Diet-induced Obese Rats
    Sun-Young Park, Ki-Seung Seong, Sang-Dong Lim
    Korean Journal for Food Science of Animal Resources.2016; 36(1): 77.     CrossRef
  • ProbioticLactobacillus gasseriSBT2055 improves glucose tolerance and reduces body weight gain in rats by stimulating energy expenditure
    Bungo Shirouchi, Koji Nagao, Minami Umegatani, Aya Shiraishi, Yukiko Morita, Shunichi Kai, Teruyoshi Yanagita, Akihiro Ogawa, Yukio Kadooka, Masao Sato
    British Journal of Nutrition.2016; 116(3): 451.     CrossRef
  • Dietary Keratan Sulfate from Shark Cartilage Modulates Gut Microbiota and Increases the Abundance of Lactobacillus spp.
    Qingsen Shang, Qinying Li, Meifang Zhang, Guanrui Song, Jingjing Shi, Hao Jiang, Chao Cai, Jiejie Hao, Guoyun Li, Guangli Yu
    Marine Drugs.2016; 14(12): 224.     CrossRef
  • Probiotics for the control of obesity – Its effect on weight change
    Ana Lídia Rouxinol-Dias, Ana Raquel Pinto, Catarina Janeiro, Daniel Rodrigues, Marta Moreira, João Dias, Pedro Pereira
    Porto Biomedical Journal.2016; 1(1): 12.     CrossRef
  • The gut microbiome in cardio-metabolic health
    Tue H Hansen, Rikke J Gøbel, Torben Hansen, Oluf Pedersen
    Genome Medicine.2015;[Epub]     CrossRef
  • Probiotic supplementation attenuates increases in body mass and fat mass during high‐fat diet in healthy young adults
    Kristin L. Osterberg, Nabil E. Boutagy, Ryan P. McMillan, Joseph R. Stevens, Madlyn I. Frisard, John W. Kavanaugh, Brenda M. Davy, Kevin P. Davy, Matthew W. Hulver
    Obesity.2015; 23(12): 2364.     CrossRef
  • Functional foods as potential therapeutic options for metabolic syndrome
    L. Brown, H. Poudyal, S. K. Panchal
    Obesity Reviews.2015; 16(11): 914.     CrossRef
  • Influence of Lactobacillus brevis 15 and Lactobacillus plantarum 13 on blood glucose and body weight in rats after high-fructose diet
    M. Yakovlieva, T. Tacheva, S. Mihaylova, R. Tropcheva, K. Trifonova, A. Toleкova, S. Danova, T. Vlaykova
    Beneficial Microbes.2015; 6(4): 505.     CrossRef
  • A natural solution for obesity: Bioactives for the prevention and treatment of weight gain. A review
    Cristina Torres-Fuentes, Harriët Schellekens, Timothy G. Dinan, John F. Cryan
    Nutritional Neuroscience.2015; 18(2): 49.     CrossRef
  • Hypoglycaemic effect of galactooligosaccharides in alloxan-induced diabetic rats
    Vikas Sangwan, Sudhir K Tomar, Babar Ali, Ram R B Singh, Ashish K Singh
    Journal of Dairy Research.2015; 82(1): 70.     CrossRef
  • The art of targeting gut microbiota for tackling human obesity
    Marisol Aguirre, Koen Venema
    Genes & Nutrition.2015;[Epub]     CrossRef
  • Probiotics: a proactive approach to health. A symposium report
    Linda V. Thomas, Kaori Suzuki, Jia Zhao
    British Journal of Nutrition.2015; 114(S1): S1.     CrossRef
  • Lactobacillus plantarum NCU116 improves liver function, oxidative stress and lipid metabolism in rats with high fat diet induced non-alcoholic fatty liver disease
    Chuan Li, Shao-Ping Nie, Ke-Xue Zhu, Qiao Ding, Chang Li, Tao Xiong, Ming-Yong Xie
    Food Funct..2014; 5(12): 3216.     CrossRef
  • Effects of Probiotic Yogurt on Fat Distribution and Gene Expression of Proinflammatory Factors in Peripheral Blood Mononuclear Cells in Overweight and Obese People with or without Weight-Loss Diet
    Mitra Zarrati, Eisa Salehi, Keramat Nourijelyani, Vahid Mofid, Mohammad Javad Hossein Zadeh, Forouzan Najafi, Zahra Ghaflati, Katayoon Bidad, Maryam Chamari, Mehrdad Karimi, Farzad Shidfar
    Journal of the American College of Nutrition.2014; 33(6): 417.     CrossRef
  • Obesity as a Consequence of Gut Bacteria and Diet Interactions
    Katerina Kotzampassi, Evangelos J. Giamarellos-Bourboulis, George Stavrou
    ISRN Obesity.2014; 2014: 1.     CrossRef
  • Evaluation of immune response, microbiota, and blood markers after probiotic bacteria administration in obese mice induced by a high-fat diet
    Ivanna Novotny Núñez, Carolina Maldonado Galdeano, Alejandra de Moreno de LeBlanc, Gabriela Perdigón
    Nutrition.2014; 30(11-12): 1423.     CrossRef
  • Survival ofBifidobacterium longumand its effect on physicochemical properties and sensorial attributes of white brined cheese
    Oguz Gursoy, Ramazan Gokce, Ahmet Hilmi Con, Ozer Kinik
    International Journal of Food Sciences and Nutrition.2014; 65(7): 816.     CrossRef
  • Combined effects of oligofructose and Bifidobacterium animalis on gut microbiota and glycemia in obese rats
    Marc R. Bomhof, Dolan C. Saha, Danielle T. Reid, Heather A. Paul, Raylene A. Reimer
    Obesity.2014; 22(3): 763.     CrossRef
  • Probiotic Microbes Sustain Youthful Serum Testosterone Levels and Testicular Size in Aging Mice
    Theofilos Poutahidis, Alex Springer, Tatiana Levkovich, Peimin Qi, Bernard J. Varian, Jessica R. Lakritz, Yassin M. Ibrahim, Antonis Chatzigiagkos, Eric J. Alm, Susan E. Erdman, Stefan Schlatt
    PLoS ONE.2014; 9(1): e84877.     CrossRef
  • Exercise induction of gut microbiota modifications in obese, non-obese and hypertensive rats
    Bernardo A Petriz, Alinne P Castro, Jeeser A Almeida, Clarissa PC Gomes, Gabriel R Fernandes, Ricardo H Kruger, Rinaldo W Pereira, Octavio L Franco
    BMC Genomics.2014;[Epub]     CrossRef
  • Modulation of the Gut Microbiota by Nutrients with Prebiotic and Probiotic Properties
    Céline Druart, Maud Alligier, Nuria Salazar, Audrey M. Neyrinck, Nathalie M. Delzenne
    Advances in Nutrition.2014; 5(5): 624S.     CrossRef
  • Gastrointestinal metabolic surgery for the treatment of type 2 diabetes mellitus
    Eng-Hong Pok
    World Journal of Gastroenterology.2014; 20(39): 14315.     CrossRef
  • Childhood Obesity: A Role for Gut Microbiota?
    Marina Sanchez, Shirin Panahi, Angelo Tremblay
    International Journal of Environmental Research and Public Health.2014; 12(1): 162.     CrossRef
  • Nutrition, the gut microbiome and the metabolic syndrome
    Petia Kovatcheva-Datchary, Tulika Arora
    Best Practice & Research Clinical Gastroenterology.2013; 27(1): 59.     CrossRef
  • Interactions between gut microbiota, food and the obese host
    Teresa Requena, Paul Cotter, Danit R. Shahar, Charlotte R. Kleiveland, M. Carmen Martínez-Cuesta, Carmen Peláez, Tor Lea
    Trends in Food Science & Technology.2013; 34(1): 44.     CrossRef
  • Anti-obesity activity of Lactobacillus fermented soy milk products
    Bao-Hong Lee, Yi-Hsuan Lo, Tzu-Ming Pan
    Journal of Functional Foods.2013; 5(2): 905.     CrossRef
  • Species and strain specificity of Lactobacillus probiotics effect on weight regulation
    Matthieu Million, Didier Raoult
    Microbial Pathogenesis.2013; 55: 52.     CrossRef
  • Supplementation of Lactobacillus curvatus HY7601 and Lactobacillus plantarum KY1032 in Diet-Induced Obese Mice Is Associated with Gut Microbial Changes and Reduction in Obesity
    Do-Young Park, Young-Tae Ahn, Se-Hoon Park, Chul-Sung Huh, Sae-Rom Yoo, Rina Yu, Mi-Kyung Sung, Robin A. McGregor, Myung-Sook Choi, Yolanda Sanz
    PLoS ONE.2013; 8(3): e59470.     CrossRef
  • Anti-Obesity Effect of Lactobacillus gasseri BNR17 in High-Sucrose Diet-Induced Obese Mice
    Ji-Hee Kang, Sung-Il Yun, Mi-Hee Park, Jun-Hong Park, So-Young Jeong, Han-Oh Park, Kathrin Maedler
    PLoS ONE.2013; 8(1): e54617.     CrossRef
  • Probiotics: Interaction with gut microbiome and antiobesity potential
    Tulika Arora, Satvinder Singh, Raj Kumar Sharma
    Nutrition.2013; 29(4): 591.     CrossRef
  • Effect ofLactobacillus gasseriBNR17 on Overweight and Obese Adults: A Randomized, Double-Blind Clinical Trial
    Seung-Pil Jung, Keun-Mi Lee, Ji-Hee Kang, Sung-Il Yun, Han-Oh Park, Yong Moon, Jong-Yeon Kim
    Korean Journal of Family Medicine.2013; 34(2): 80.     CrossRef
  • Microbial Reprogramming Inhibits Western Diet-Associated Obesity
    Theofilos Poutahidis, Markus Kleinewietfeld, Christopher Smillie, Tatiana Levkovich, Alison Perrotta, Siddheshvar Bhela, Bernard J. Varian, Yassin M. Ibrahim, Jessica R. Lakritz, Sean M. Kearney, Antonis Chatzigiagkos, David A. Hafler, Eric J. Alm, Susan
    PLoS ONE.2013; 8(7): e68596.     CrossRef
  • Assessment of probiotic and sensory properties of dahi and yoghurt prepared using bulk freeze-dried cultures in buffalo milk
    Sistla Venkata Naga Vijayendra, Ramesh Chander Gupta
    Annals of Microbiology.2012; 62(3): 939.     CrossRef
  • The therapeutic potential of manipulating gut microbiota in obesity and type 2 diabetes mellitus
    R. S. Kootte, A. Vrieze, F. Holleman, G. M. Dallinga‐Thie, E. G. Zoetendal, W. M. de Vos, A. K. Groen, J. B. L. Hoekstra, E. S. Stroes, M. Nieuwdorp
    Diabetes, Obesity and Metabolism.2012; 14(2): 112.     CrossRef
  • Effects of Gut Microbes on Nutrient Absorption and Energy Regulation
    Rosa Krajmalnik‐Brown, Zehra‐Esra Ilhan, Dae‐Wook Kang, John K. DiBaise
    Nutrition in Clinical Practice.2012; 27(2): 201.     CrossRef
  • Potent effects of, and mechanisms for, modification of crosstalk between macrophages and adipocytes by lactobacilli
    Kenji Miyazawa, Fang He, Kazutoyo Yoda, Masaru Hiramatsu
    Microbiology and Immunology.2012; 56(12): 847.     CrossRef
  • Probiotics, their health benefits and applications for developing healthier foods: a review
    Ravinder Nagpal, Ashwani Kumar, Manoj Kumar, Pradip V. Behare, Shalini Jain, Hariom Yadav
    FEMS Microbiology Letters.2012; 334(1): 1.     CrossRef
  • Effects of two Lactobacillus strains on lipid metabolism and intestinal microflora in rats fed a high-cholesterol diet
    Ning Xie, Yi Cui, Ya-Ni Yin, Xin Zhao, Jun-Wen Yang, Zheng-Gen Wang, Nian Fu, Yong Tang, Xue-Hong Wang, Xiao-Wei Liu, Chun-Lian Wang, Fang-Gen Lu
    BMC Complementary and Alternative Medicine.2011;[Epub]     CrossRef
Reviews
REVIEW] Dinoflagellates, Diatoms, and Their Viruses
Keizo Nagasaki
J. Microbiol. 2008;46(3):235-243.   Published online July 5, 2008
DOI: https://doi.org/10.1007/s12275-008-0098-y
  • 253 View
  • 0 Download
  • 96 Crossref
AbstractAbstract PDF
Since the first discovery of the very high virus abundance in marine environments, a number of researchers were fascinated with the world of “marine viruses”, which had previously been mostly overlooked in studies on marine ecosystems. In the present paper, the possible role of viruses infecting marine eukaryotic microalgae is enlightened, especially summarizing the most up-to-the-minute information of marine viruses infecting bloom-forming dinoflagellates and diatoms. To author’s knowledge, ~40 viruses infecting marine eukaryotic algae have been isolated and characterized to different extents. Among them, a double-stranded DNA (dsDNA) virus “HcV” and a single-stranded RNA (ssRNA) virus “HcRNAV” are the only dinoflagellate-infecting (lytic) viruses that were made into culture; their hosts are a bivalve-killing dinoflagellate Heterocapsa circularisquama. In this article, ecological relationship between H. circularisquama and its viruses is focused. On the other hand, several diatom-infecting viruses were recently isolated and partially characterized; among them, one is infectious to a pen-shaped bloom-forming diatom species Rhizosolenia setigera; some viruses are infectious to genus Chaetoceros which is one of the most abundant and diverse diatom group. Although the ecological relationships between diatoms and their viruses have not been sufficiently elucidated, viral infection is considered to be one of the significant factors affecting dynamics of diatoms in nature. Besides, both the dinoflagellate-infecting viruses and diatom-infecting viruses are so unique from the viewpoint of virus taxonomy; they are remarkably different from any other viruses ever reported. Studies on these viruses lead to an idea that ocean may be a treasury of novel viruses equipped with fascinating functions and ecological roles.

Citations

Citations to this article as recorded by  
  • Correlation with viruses enhances network complexity and stability of co-occurrence prokaryotes across the oceans
    Bo Wang, Yantao Liang, Kaiyue Lian, Chuyu Zhang, Meiaoxue Han, Min Wang, Hongbing Shao, Andrew McMinn, Hualong Wang, Neha Sachdeva
    mSystems.2025;[Epub]     CrossRef
  • Temperature-induced changes in the relevance of viral lysis and microzooplankton grazing of Antarctic phytoplankton indicates future alterations in seasonal carbon flow
    Tristan E G Biggs, Gonçalo J Piedade, Ella M Wesdorp, Michael P Meredith, Claire Evans, Corina P D Brussaard
    FEMS Microbiology Ecology.2025;[Epub]     CrossRef
  • Diverse ssRNA viruses associated with Karenia brevis harmful algal blooms in southwest Florida
    Shen Jean Lim, Alexandra Rogers, Karyna Rosario, Makenzie Kerr, Matt Garrett, Julie Koester, Katherine Hubbard, Mya Breitbart, Xiyang Dong
    mSphere.2025;[Epub]     CrossRef
  • Making Waves: Emphasizing Integrated Research on Harmful Algal Blooms Over Single-Species Laboratory Studies
    Boling Li, Xiaokai Zhang, Hans W. Paerl, Boris Tefsen, Mona Wells
    Water Research.2025; : 124051.     CrossRef
  • Antarctica's hidden mycoviral treasures in fungi isolated from mosses: A first genomic approach
    Steffany V. A. Nobre, Guilherme A. K. de Andrade, Geferson F. Metz, Fabíola Lucini, Margéli P. de Albuquerque, Filipe de C. Victória
    Journal of Basic Microbiology.2024;[Epub]     CrossRef
  • Multifaceted Dinoflagellates and the Marine Model Prorocentrum cordatum
    Jana Kalvelage, Ralf Rabus
    Microbial Physiology.2024; 34(1): 197.     CrossRef
  • Molecular identification of Halomonas AZ07 and its multifunctional enzymatic activities to degrade Pyropia yezoensis under high-temperature condition
    Aurang Zeb, Yasmin Khan, Hongyan He, Dongren Zhang, Songdong Shen
    Molecular Biology Reports.2024;[Epub]     CrossRef
  • Discovery of novel and known viruses associated with toxigenic and non-toxigenic bloom forming diatoms from the Northern Adriatic Sea
    Timotej Turk Dermastia, Denis Kutnjak, Ion Gutierrez-Aguirre, Corina P.D. Brussaard, Katarina Bačnik
    Harmful Algae.2024; 139: 102737.     CrossRef
  • Biodiversity of microorganisms in the Baltic Sea: the power of novel methods in the identification of marine microbes
    Hanna Mazur-Marzec, Anders F Andersson, Agata Błaszczyk, Przemysław Dąbek, Ewa Górecka, Michał Grabski, Katarzyna Jankowska, Agata Jurczak-Kurek, Anna K Kaczorowska, Tadeusz Kaczorowski, Bengt Karlson, Marija Kataržytė, Justyna Kobos, Ewa Kotlarska, Beata
    FEMS Microbiology Reviews.2024;[Epub]     CrossRef
  • A decade of dinoflagellate genomics illuminating an enigmatic eukaryote cell
    Senjie Lin
    BMC Genomics.2024;[Epub]     CrossRef
  • Temperature modulates dominance of a superinfecting Arctic virus in its unicellular algal host
    Claudia Meyer, Victoria L N Jackson, Keith Harrison, Ioanna Fouskari, Henk Bolhuis, Yael A Artzy-Randrup, Jef Huisman, Adam Monier, Corina P D Brussaard
    The ISME Journal.2024;[Epub]     CrossRef
  • Active viral infection during blooms of a dinoflagellate indicates dinoflagellate-viral co-adaptation
    Jingtian Wang, Ling Li, Senjie Lin, John R. Spear
    Applied and Environmental Microbiology.2023;[Epub]     CrossRef
  • Metavirome-assembled genome sequence of a new aquatic RNA virus expands the genus Locarnavirus
    Fangxin Lu, Shuang Wu, Yimin Ni, Yongxin Yu, Songzhe Fu, Yongjie Wang
    Archives of Virology.2023;[Epub]     CrossRef
  • Filamentous virus-like particles are present in coral dinoflagellates across genera and ocean basins
    Lauren I Howe-Kerr, Anna M Knochel, Matthew D Meyer, Jordan A Sims, Carly E Karrick, Carsten G B Grupstra, Alex J Veglia, Andrew R Thurber, Rebecca L Vega Thurber, Adrienne M S Correa
    The ISME Journal.2023; 17(12): 2389.     CrossRef
  • Morphological and molecular examination of the ciliate family Lagynusidae (Protista, Ciliophora, Prostomatea) with descriptions of two new genera and two new species from China
    Limin Jiang, Congcong Wang, Saleh A. Al-Farraj, Hunter N. Hines, Xiaozhong Hu
    Marine Life Science & Technology.2023; 5(2): 178.     CrossRef
  • Harmful cyanobacteria-diatom/dinoflagellate blooms and their cyanotoxins in freshwaters: A nonnegligible chronic health and ecological hazard
    Yanyan Zhang, Joann K. Whalen, Chen Cai, Kun Shan, Hongxu Zhou
    Water Research.2023; 233: 119807.     CrossRef
  • Cryptic and abundant marine viruses at the evolutionary origins of Earth’s RNA virome
    Ahmed A. Zayed, James M. Wainaina, Guillermo Dominguez-Huerta, Eric Pelletier, Jiarong Guo, Mohamed Mohssen, Funing Tian, Akbar Adjie Pratama, Benjamin Bolduc, Olivier Zablocki, Dylan Cronin, Lindsey Solden, Erwan Delage, Adriana Alberti, Jean-Marc Aury,
    Science.2022; 376(6589): 156.     CrossRef
  • Freshwater macrophytes harbor viruses representing all five major phyla of the RNA viral kingdom Orthornavirae
    Karyna Rosario, Noémi Van Bogaert, Natalia B. López-Figueroa, Haris Paliogiannis, Mason Kerr, Mya Breitbart
    PeerJ.2022; 10: e13875.     CrossRef
  • Ecological Importance of Viral Lysis as a Loss Factor of Phytoplankton in the Amundsen Sea
    Charlotte Eich, Tristan E. G. Biggs, Willem H. van de Poll, Mathijs van Manen, Hung-An Tian, Jinyoung Jung, Youngju Lee, Rob Middag, Corina P. D. Brussaard
    Microorganisms.2022; 10(10): 1967.     CrossRef
  • Viruses of Rhodophyta: lack of cultures and genomic resources pose a threat to the growing red algal aquaculture industry
    L. Felipe Benites, Cícero Alves-Lima
    Applied Phycology.2022; 3(1): 285.     CrossRef
  • Nitrogen and Iron Availability Drive Metabolic Remodeling and Natural Selection of Diverse Phytoplankton during Experimental Upwelling
    B. C. Kolody, S. R. Smith, L. Zeigler Allen, J. P. McCrow, A. Moustafa, D. Shi, B. M. Hopkinson, F. M. M. Morel, B. B. Ward, A. E. Allen, Hans C. Bernstein
    mSystems.2022;[Epub]     CrossRef
  • Seasonal and decadal variations in absorption properties of phytoplankton and non-algal particulate matter in three oceanic regimes of the Northwest Atlantic
    Emmanuel Devred, Tim Perry, Philippe Massicotte
    Frontiers in Marine Science.2022;[Epub]     CrossRef
  • Highly diverse flavobacterial phages isolated from North Sea spring blooms
    Nina Bartlau, Antje Wichels, Georg Krohne, Evelien M Adriaenssens, Anneke Heins, Bernhard M Fuchs, Rudolf Amann, Cristina Moraru
    The ISME Journal.2022; 16(2): 555.     CrossRef
  • Harmful algal blooms and environmentally friendly control strategies in Japan
    Ichiro Imai, Nobuharu Inaba, Keigo Yamamoto
    Fisheries Science.2021; 87(4): 437.     CrossRef
  • Over-expression and Host-specific Algicidal Effect of Virus-like Particles from Capsid Gene of HcRNAV34 Virus Infecting against a Harmful alga, Heterocapsa circularisquama
    Sun Il Seo, Jae Won Ryu, Si Wouk Kim
    KSBB Journal.2021; 36(4): 285.     CrossRef
  • Viral lysis modifies seasonal phytoplankton dynamics and carbon flow in the Southern Ocean
    Tristan E G Biggs, Jef Huisman, Corina P D Brussaard
    The ISME Journal.2021; 15(12): 3615.     CrossRef
  • Comparative Genomics and Environmental Distribution of Large dsDNA Viruses in the Family Asfarviridae
    Sangita Karki, Mohammad Moniruzzaman, Frank O. Aylward
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Phytoplankton dynamics and bloom formation in the oligotrophic Eastern Mediterranean: Field studies in the Aegean, Levantine and Ionian seas
    I. Varkitzi, S. Psarra, G. Assimakopoulou, A. Pavlidou, E. Krasakopoulou, D. Velaoras, E. Papathanassiou, K. Pagou
    Deep Sea Research Part II: Topical Studies in Oceanography.2020; 171: 104662.     CrossRef
  • Minireview: The role of viruses in marine photosynthetic biofilms
    Andrew McMinn, Yantao Liang, Min Wang
    Marine Life Science & Technology.2020; 2(3): 203.     CrossRef
  • Doubling of the known set of RNA viruses by metagenomic analysis of an aquatic virome
    Yuri I. Wolf, Sukrit Silas, Yongjie Wang, Shuang Wu, Michael Bocek, Darius Kazlauskas, Mart Krupovic, Andrew Fire, Valerian V. Dolja, Eugene V. Koonin
    Nature Microbiology.2020; 5(10): 1262.     CrossRef
  • Viruses of fungi and oomycetes in the soil environment
    Suvi Sutela, Anna Poimala, Eeva J Vainio
    FEMS Microbiology Ecology.2019;[Epub]     CrossRef
  • Chloroviruses
    James L. Van Etten, Irina V. Agarkova, David D. Dunigan
    Viruses.2019; 12(1): 20.     CrossRef
  • Can diatom girdle band pores act as a hydrodynamic viral defense mechanism?
    J. W. Herringer, D. Lester, G. E. Dorrington, G. Rosengarten
    Journal of Biological Physics.2019; 45(2): 213.     CrossRef
  • A critical review on control methods for harmful algal blooms
    Juan J. Gallardo‐Rodríguez, Allisson Astuya‐Villalón, Alejandra Llanos‐Rivera, Veronica Avello‐Fontalba, Viviana Ulloa‐Jofré
    Reviews in Aquaculture.2019; 11(3): 661.     CrossRef
  • Diel transcriptional response of a California Current plankton microbiome to light, low iron, and enduring viral infection
    B C Kolody, J P McCrow, L Zeigler Allen, F O Aylward, K M Fontanez, A Moustafa, M Moniruzzaman, F P Chavez, C A Scholin, E E Allen, A Z Worden, E F Delong, A E Allen
    The ISME Journal.2019; 13(11): 2817.     CrossRef
  • Elucidating Viral Communities During a Phytoplankton Bloom on the West Antarctic Peninsula
    Tomás Alarcón-Schumacher, Sergio Guajardo-Leiva, Josefa Antón, Beatriz Díez
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Silicon limitation facilitates virus infection and mortality of marine diatoms
    Chana F. Kranzler, Jeffrey W. Krause, Mark A. Brzezinski, Bethanie R. Edwards, William P. Biggs, Michael Maniscalco, John P. McCrow, Benjamin A. S. Van Mooy, Kay D. Bidle, Andrew E. Allen, Kimberlee Thamatrakoln
    Nature Microbiology.2019; 4(11): 1790.     CrossRef
  • Visualization of a Dinoflagellate-Infecting Virus HcDNAV and Its Infection Process
    Yoshihito Takano, Yuji Tomaru, Keizo Nagasaki
    Viruses.2018; 10(10): 554.     CrossRef
  • Microbial Community Structure and Associations During a Marine Dinoflagellate Bloom
    Jin Zhou, Mindy L. Richlen, Taylor R. Sehein, David M. Kulis, Donald M. Anderson, Zhonghua Cai
    Frontiers in Microbiology.2018;[Epub]     CrossRef
  • Viruses of Eukaryotic Algae: Diversity, Methods for Detection, and Future Directions
    Samantha R. Coy, Eric R. Gann, Helena L. Pound, Steven M. Short, Steven W. Wilhelm
    Viruses.2018; 10(9): 487.     CrossRef
  • Influence of diatom diversity on the ocean biological carbon pump
    Paul Tréguer, Chris Bowler, Brivaela Moriceau, Stephanie Dutkiewicz, Marion Gehlen, Olivier Aumont, Lucie Bittner, Richard Dugdale, Zoe Finkel, Daniele Iudicone, Oliver Jahn, Lionel Guidi, Marine Lasbleiz, Karine Leblanc, Marina Levy, Philippe Pondaven
    Nature Geoscience.2018; 11(1): 27.     CrossRef
  • Communities of Phytoplankton Viruses across the Transition Zone of the St. Lawrence Estuary
    Myriam Labbé, Frédéric Raymond, Alice Lévesque, Mary Thaler, Vani Mohit, Martyne Audet, Jacques Corbeil, Alexander Culley
    Viruses.2018; 10(12): 672.     CrossRef
  • Viruses on the menu: The appendicularianOikopleura dioicaefficiently removes viruses from seawater
    Janice Lawrence, Joachim Töpper, Elżbieta Petelenz‐Kurdziel, Gunnar Bratbak, Aud Larsen, Eric Thompson, Christofer Troedsson, Jessica Louise Ray
    Limnology and Oceanography.2018;[Epub]     CrossRef
  • Diversity, evolutionary contribution and ecological roles of aquatic viruses
    Qi-Ya Zhang, Jian-Fang Gui
    Science China Life Sciences.2018; 61(12): 1486.     CrossRef
  • Viral assemblage variation in an Arctic shelf seafloor
    TT Nguyen, EM Robertsen, B Landfald
    Aquatic Microbial Ecology.2017; 78(3): 135.     CrossRef
  • The Baltic Sea Virome: Diversity and Transcriptional Activity of DNA and RNA Viruses
    Lisa Zeigler Allen, John P. McCrow, Karolina Ininbergs, Christopher L. Dupont, Jonathan H. Badger, Jeffery M. Hoffman, Martin Ekman, Andrew E. Allen, Birgitta Bergman, J. Craig Venter, Joshua Weitz
    mSystems.2017;[Epub]     CrossRef
  • A Pelagic Microbiome (Viruses to Protists) from a Small Cup of Seawater
    Flavia Flaviani, Declan Schroeder, Cecilia Balestreri, Joanna Schroeder, Karen Moore, Konrad Paszkiewicz, Maya Pfaff, Edward Rybicki
    Viruses.2017; 9(3): 47.     CrossRef
  • The Response of Heterotrophic Prokaryote and Viral Communities to Labile Organic Carbon Inputs Is Controlled by the Predator Food Chain Structure
    Ruth-Anne Sandaa, Bernadette Pree, Aud Larsen, Selina Våge, Birte Töpper, Joachim Töpper, Runar Thyrhaug, Tron Thingstad
    Viruses.2017; 9(9): 238.     CrossRef
  • Seasonal Dynamics of Haptophytes and dsDNA Algal Viruses Suggest Complex Virus-Host Relationship
    Torill Johannessen, Aud Larsen, Gunnar Bratbak, António Pagarete, Bente Edvardsen, Elianne Egge, Ruth-Anne Sandaa
    Viruses.2017; 9(4): 84.     CrossRef
  • Evolutionary history of ssDNA bacilladnaviruses features horizontal acquisition of the capsid gene from ssRNA nodaviruses
    Darius Kazlauskas, Anisha Dayaram, Simona Kraberger, Sharyn Goldstien, Arvind Varsani, Mart Krupovic
    Virology.2017; 504: 114.     CrossRef
  • Chain response of microbial loop to the decay of a diatom bloom in the East China Sea
    Linnan Wu, Shiquan Lin, Lingfeng Huang, Jiachang Lu, Wenzhao Chen, Weidong Guo, Wuchang Zhang, Tian Xiao, Jun Sun
    Deep Sea Research Part II: Topical Studies in Oceanography.2016; 124: 109.     CrossRef
  • Characterisation of algicidal bacterial exometabolites against the lipid-accumulating diatom Skeletonema sp.
    Hui Wang, Lisa Butt, Paul Rooks, Farid Khan, Michael J. Allen, Sohail T. Ali
    Algal Research.2016; 13: 1.     CrossRef
  • Selective growth promotion of bloom-forming raphidophyte Heterosigma akashiwo by a marine bacterial strain
    Aiko Higashi, Yoshiko Fujitani, Natsuko Nakayama, Akio Tani, Shoko Ueki
    Harmful Algae.2016; 60: 150.     CrossRef
  • A capsidless ssRNA virus hosted by an unrelated dsRNA virus
    Rui Zhang, Sakae Hisano, Akio Tani, Hideki Kondo, Satoko Kanematsu, Nobuhiro Suzuki
    Nature Microbiology.2016;[Epub]     CrossRef
  • Metagenomic characterization of viral communities in corals: mining biological signal from methodological noise
    Elisha M. Wood‐Charlson, Karen D. Weynberg, Curtis A. Suttle, Simon Roux, Madeleine J. H. van Oppen
    Environmental Microbiology.2015; 17(10): 3440.     CrossRef
  • Algicidal microorganisms and secreted algicides: New tools to induce microalgal cell disruption
    Marie Demuez, Cristina González-Fernández, Mercedes Ballesteros
    Biotechnology Advances.2015; 33(8): 1615.     CrossRef
  • Isolation and Physiological Characterization of a Novel Algicidal Virus Infecting the Marine Diatom Skeletonema costatum
    JinJoo Kim, Chang-Hoon Kim, Seok-Hyun Youn, Tae-Jin Choi
    The Plant Pathology Journal.2015; 31(2): 186.     CrossRef
  • Viral Impact on Prokaryotic and Microalgal Activities in the Microphytobenthic Biofilm of an Intertidal Mudflat (French Atlantic Coast)
    Hélène Montanié, Margot G. De Crignis, Johann Lavaud
    Frontiers in Microbiology.2015;[Epub]     CrossRef
  • Construction of target‐specific virus‐like particles for the delivery of algicidal compounds to harmful algae
    Beom Sik Kang, Chi‐Yong Eom, Wonduck Kim, Pyoung il Kim, Sun Yi Ju, Jaewon Ryu, Gui Hwan Han, Jeong‐Il Oh, Hoon Cho, Seung Ho Baek, Gueeda Kim, Minju Kim, Jaekyung Hyun, EonSeon Jin, Si Wouk Kim
    Environmental Microbiology.2015; 17(4): 1463.     CrossRef
  • Ecological Dynamics of Two Distinct Viruses Infecting Marine Eukaryotic Decomposer Thraustochytrids (Labyrinthulomycetes, Stramenopiles)
    Yoshitake Takao, Yuji Tomaru, Keizo Nagasaki, Daiske Honda, Arga Chandrashekar Anil
    PLOS ONE.2015; 10(7): e0133395.     CrossRef
  • Comparative metagenomic analyses reveal viral-induced shifts of host metabolism towards nucleotide biosynthesis
    Hagay Enav, Yael Mandel-Gutfreund, Oded Béjà
    Microbiome.2014;[Epub]     CrossRef
  • Seasonal variations in PCR‐DGGE fingerprinted viruses infecting phytoplankton in large and deep peri‐alpine lakes
    X. Zhong, F. Rimet, S. Jacquet
    Ecological Research.2014; 29(2): 271.     CrossRef
  • Contrasting diversity of phycodnavirus signature genes in two large and deep western European lakes
    Xu Zhong, Stéphan Jacquet
    Environmental Microbiology.2014; 16(3): 759.     CrossRef
  • Unique nucleocytoplasmic dsDNA and +ssRNA viruses are associated with the dinoflagellate endosymbionts of corals
    Adrienne M S Correa, Rory M Welsh, Rebecca L Vega Thurber
    The ISME Journal.2013; 7(1): 13.     CrossRef
  • Genomic Makeup of the Marine Flavobacterium Nonlabens (Donghaeana) dokdonensis and Identification of a Novel Class of Rhodopsins
    Soon-Kyeong Kwon, Byung Kwon Kim, Ju Yeon Song, Min-Jung Kwak, Choong Hoon Lee, Jung-Hoon Yoon, Tae Kwang Oh, Jihyun F. Kim
    Genome Biology and Evolution.2013; 5(1): 187.     CrossRef
  • Characterization ofTrichodesmium-associated viral communities in the eastern Gulf of Mexico
    Julia M. Brown, Brenna A. LaBarre, Ian Hewson
    FEMS Microbiology Ecology.2013; 84(3): 603.     CrossRef
  • The Perils of Pathogen Discovery: Origin of a Novel Parvovirus-Like Hybrid Genome Traced to Nucleic Acid Extraction Spin Columns
    Samia N. Naccache, Alexander L. Greninger, Deanna Lee, Lark L. Coffey, Tung Phan, Annie Rein-Weston, Andrew Aronsohn, John Hackett, Eric L. Delwart, Charles Y. Chiu
    Journal of Virology.2013; 87(22): 11966.     CrossRef
  • Diurnal variations in bacterial and viral production in Cochin estuary, India
    Ammini Parvathi, Vijayan Jasna, Keshavan C. Haridevi, Sebastian Jina, Murali Greeshma, Jacob Breezy, Maheswari Nair
    Environmental Monitoring and Assessment.2013; 185(10): 8077.     CrossRef
  • Evaluation of higher plant virus resistance genes in the green alga, Chlorella variabilis NC64A, during the early phase of infection with Paramecium bursaria chlorella virus-1
    Janet M. Rowe, David D. Dunigan, Guillaume Blanc, James R. Gurnon, Yuannan Xia, James L. Van Etten
    Virology.2013; 442(2): 101.     CrossRef
  • Initial risk assessment of genetically modified (GM) microalgae for commodity-scale biofuel cultivation
    William J. Henley, R. Wayne Litaker, Lucie Novoveská, Clifford S. Duke, Hector D. Quemada, Richard T. Sayre
    Algal Research.2013; 2(1): 66.     CrossRef
  • Exploring nucleo-cytoplasmic large DNA viruses in Tara Oceans microbial metagenomes
    Pascal Hingamp, Nigel Grimsley, Silvia G Acinas, Camille Clerissi, Lucie Subirana, Julie Poulain, Isabel Ferrera, Hugo Sarmento, Emilie Villar, Gipsi Lima-Mendez, Karoline Faust, Shinichi Sunagawa, Jean-Michel Claverie, Hervé Moreau, Yves Desdevises, Peer
    The ISME Journal.2013; 7(9): 1678.     CrossRef
  • Dozens of Toxin-Related Genes Are Expressed in a Nontoxic Strain of the Dinoflagellate Heterocapsa circularisquama
    Tovah Salcedo, Ravi J. Upadhyay, Keizo Nagasaki, Debashish Bhattacharya
    Molecular Biology and Evolution.2012; 29(6): 1503.     CrossRef
  • Benefits of live phytoplankton, Chlorella vulgaris, as a biocontrol agent against fish pathogen Vibrio anguillarum
    Emilia Noor Sharifah, Mitsuru Eguchi
    Fisheries Science.2012; 78(2): 367.     CrossRef
  • Expression and self-assembly of Heterocapsa circularisquama RNA virus-like particles synthesized in Pichia pastoris
    YuanZheng Wu, Wonduck Kim, Si-Wouk Kim, Chi-Yong Eom, HeTong Yang, Hyun-Jae Shin
    Chinese Science Bulletin.2012; 57(25): 3288.     CrossRef
  • Marine Viruses: Truth or Dare
    Mya Breitbart
    Annual Review of Marine Science.2012; 4(1): 425.     CrossRef
  • Isolation and Physiological Characterization of a New Algicidal Virus Infecting the Harmful Dinoflagellate Heterocapsa pygmaea
    JinJoo Kim, Chang-Hoon Kim, Yoshihito Takano, In-Kwon Jang, Si Wouk Kim, Tae-Jin Choi
    The Plant Pathology Journal.2012; 28(4): 433.     CrossRef
  • Smaller Fleas: Viruses of Microorganisms
    Paul Hyman, Stephen T. Abedon
    Scientifica.2012; 2012: 1.     CrossRef
  • The ecology of viruses that infect eukaryotic algae
    Steven M. Short
    Environmental Microbiology.2012; 14(9): 2253.     CrossRef
  • Chloroviruses: not your everyday plant virus
    James L. Van Etten, David D. Dunigan
    Trends in Plant Science.2012; 17(1): 1.     CrossRef
  • Ecological roles of the parasitic phytomyxids (plasmodiophorids) in marine ecosystems - a review
    Sigrid Neuhauser, Martin Kirchmair, Frank H. Gleason
    Marine and Freshwater Research.2011; 62(4): 365.     CrossRef
  • Harmful algal blooms (HABs), dissolved organic matter (DOM), and planktonic microbial community dynamics at a near-shore and a harbour station influenced by upwelling (SW Iberian Peninsula)
    Sofia Loureiro, Albert Reñé, Esther Garcés, Jordi Camp, Dolors Vaqué
    Journal of Sea Research.2011; 65(4): 401.     CrossRef
  • Viruses of reef-building scleractinian corals
    Rebecca L. Vega Thurber, Adrienne M.S. Correa
    Journal of Experimental Marine Biology and Ecology.2011; 408(1-2): 102.     CrossRef
  • Giant viruses in the environment: their origins and evolution
    Takashi Yamada
    Current Opinion in Virology.2011; 1(1): 58.     CrossRef
  • Viruses in aquatic ecosystems: important advancements of the last 20 years and prospects for the future in the field of microbial oceanography and limnology
    Stéphan Jacquet, Takeshi Miki, Rachel Noble, Peter Peduzzi, Steven Wilhelm
    Advances in Oceanography and Limnology.2010; 1(1): 97.     CrossRef
  • Production and utilization of organic matter in different P-availability conditions: A mesocosm experiment in the Northern Adriatic Sea
    Chiara Larato, Mauro Celussi, Damiano Virgilio, Ana Karuza, Claus Falconi, Cinzia De Vittor, Paola Del Negro, Serena Fonda Umani
    Journal of Experimental Marine Biology and Ecology.2010; 391(1-2): 131.     CrossRef
  • DNA Viruses: The Really Big Ones (Giruses)
    James L. Van Etten, Leslie C. Lane, David D. Dunigan
    Annual Review of Microbiology.2010; 64(1): 83.     CrossRef
  • Oceanographic and Biogeochemical Insights from Diatom Genomes
    Chris Bowler, Assaf Vardi, Andrew E. Allen
    Annual Review of Marine Science.2010; 2(1): 333.     CrossRef
  • Algal diseases: spotlight on a black box
    Claire M.M. Gachon, Télesphore Sime-Ngando, Martina Strittmatter, Aurélie Chambouvet, Gwang Hoon Kim
    Trends in Plant Science.2010; 15(11): 633.     CrossRef
  • Application of real-time PCR assay for detection and quantification of bloom-forming diatom Chaetoceros tenuissimus Meunier
    Kensuke Toyoda, Keizo Nagasaki, Yuji Tomaru
    Plankton and Benthos Research.2010; 5(2): 56.     CrossRef
  • Horizontal gene transfer of an entire metabolic pathway between a eukaryotic alga and its DNA virus
    Adam Monier, António Pagarete, Colomban de Vargas, Michael J. Allen, Betsy Read, Jean-Michel Claverie, Hiroyuki Ogata
    Genome Research.2009; 19(8): 1441.     CrossRef
  • Remarkable sequence similarity between the dinoflagellate-infecting marine girus and the terrestrial pathogen African swine fever virus
    Hiroyuki Ogata, Kensuke Toyoda, Yuji Tomaru, Natsuko Nakayama, Yoko Shirai, Jean-Michel Claverie, Keizo Nagasaki
    Virology Journal.2009;[Epub]     CrossRef
  • Recent progress in protist virology - molecular ecology, taxomony, molecular evolution
    Keizo NAGASAKI, Yuji TOMARU
    Uirusu.2009; 59(1): 31.     CrossRef
  • RNA viruses in the sea
    Andrew S. Lang, Matthew L. Rise, Alexander I. Culley, Grieg F. Steward
    FEMS Microbiology Reviews.2009; 33(2): 295.     CrossRef
  • Seasonal variations of microbial abundances and virus- versus flagellate-induced mortality of picoplankton in three peri-alpine lakes
    S. Personnic, I. Domaizon, T. Sime-Ngando, S. Jacquet
    Journal of Plankton Research.2009; 31(10): 1161.     CrossRef
  • Characterization of the Chaetoceros salsugineum nuclear inclusion virus coat protein gene
    Yunjung Park, Sang-Eun Jung, Yuji Tomaru, Woobong Choi, Yoonhee Kim, Hiroyuki Mizumoto, Keizo Nagasaki, Tae-Jin Choi
    Virus Research.2009; 142(1-2): 127.     CrossRef
  • How to Infect a Mimivirus
    Hiroyuki Ogata, Jean-Michel Claverie
    Science.2008; 321(5894): 1305.     CrossRef
MINIREVIEW] Biofilm dispersion in Pseudomonas aeruginosa
Soo-Kyoung Kim , Joon-Hee Lee
J. Microbiol. 2016;54(2):71-85.   Published online February 2, 2016
DOI: https://doi.org/10.1007/s12275-016-5528-7
  • 378 View
  • 0 Download
  • 94 Crossref
AbstractAbstract PDF
In recent decades, many researchers have written numerous articles about microbial biofilms. Biofilm is a complex community of microorganisms and an example of bacterial group behavior. Biofilm is usually considered a sessile mode of life derived from the attached growth of microbes to surfaces, and most biofilms are embedded in self-produced extracellular matrix composed of extracellular polymeric substances (EPSs), such as polysaccharides, extracellular DNAs (eDNA), and proteins. Dispersal, a mode of biofilm detachment indicates active mechanisms that cause individual cells to separate from the biofilm and return to planktonic life. Since biofilm cells are cemented and surrounded by EPSs, dispersal is not simple to do and many researchers are now paying more attention to this active detachment process. Unlike other modes of biofilm detachment such as erosion or sloughing, which are generally considered passive processes, dispersal occurs as a result of complex spatial differentiation and molecular events in biofilm cells in response to various environmental cues, and there are many biological reasons that force bacterial cells to disperse from the biofilms. In this review, we mainly focus on the spatial differentiation of biofilm that is a prerequisite for dispersal, as well as environmental cues and molecular events related to the biofilm dispersal. More specifically, we discuss the dispersal-related phenomena and mechanisms observed in Pseudomonas aeruginosa, an important opportunistic human pathogen and representative model organism for biofilm study.

Citations

Citations to this article as recorded by  
  • Overview of the effects and mechanisms of NO and its donors on biofilms
    Yanan Tian, Xiaojing Tian, Teng Li, Wenhang Wang
    Critical Reviews in Food Science and Nutrition.2025; 65(4): 647.     CrossRef
  • Anti-Virulence Efficacy of Chinese Dragon’s Blood Against Pseudomonas aeruginosa Isolated from Wound Infections
    Yingjie Shen, Zengyue Gu, Yujie Li, Hanmeng Zhou, Shengzhe Zhu, Lingtao Sheng, Xinhua Qiang, Xiangkuo Zheng
    Infection and Drug Resistance.2025; Volume 18: 3157.     CrossRef
  • Hostile Environments: Modifying Surfaces to Block Microbial Adhesion and Biofilm Formation
    Derek Wilkinson, Libuše Váchová, Zdena Palková
    Biomolecules.2025; 15(6): 754.     CrossRef
  • Biofilm Dispersal in Bacillus velezensis FZB42 Is Regulated by the Second Messenger c-di-GMP
    Meiyu Zhang, Shanyou Wu, Peng Chen, Lin Shao, Zizhu Shen, Yinjuan Zhao
    Microorganisms.2025; 13(4): 896.     CrossRef
  • CAM/TMA-DPH as a promising alternative to SYTO9/PI for cell viability assessment in bacterial biofilms
    Tinatini Tchatchiashvili, Mateusz Jundzill, Mike Marquet, Kamran A. Mirza, Mathias W. Pletz, Oliwia Makarewicz, Lara Thieme
    Frontiers in Cellular and Infection Microbiology.2025;[Epub]     CrossRef
  • Anti-Biofilm Agents to Overcome Pseudomonas aeruginosa Antibiotic Resistance
    Marie Hanot, Elodie Lohou, Pascal Sonnet
    Pharmaceuticals.2025; 18(1): 92.     CrossRef
  • Growth and Rhamnolipid Production Performance of Pseudomonas aeruginosa on Crude Biomass Carbohydrates and Bioenhancer-Based Growth Media
    Rajat Sharma, Buddhi P. Lamsal
    Applied Sciences.2025; 15(5): 2531.     CrossRef
  • Infecciones respiratorias bacterianas en niños con traqueostomía
    Miguel García-Boyano, Cristina Calvo, Luis Escosa García
    Revista Latinoamericana de Infectología Pediátrica.2025; 38(2): 46.     CrossRef
  • Quorum Sensing Inhibition by Sponge-Associated Bacillus Species: Suppressing Pseudomonas aeruginosa Virulence Factors
    Carrie Shelouise Jacobs, Ryan Naicker, Hafizah Yousuf Chenia
    Antibiotics.2025; 14(10): 1035.     CrossRef
  • Effects of various physicochemical parameters on the Biofilm formation and Pyocyanin production in Pseudomonas aeruginosa PA14
    Sautrik Bhattacharya, Aravind Venkatasubramanian, Ananya Chatterjee, Partha Pratim Datta
    Biotechnology Letters.2025;[Epub]     CrossRef
  • Accumulated temperature dictates the regional structural variation of prokaryotic periphyton at soil-water interface in paddy fields
    Pengfei Sun, Kunkun Fan, Yuji Jiang, Haiyan Chu, Yin Chen, Yonghong Wu
    Water Research.2024; 265: 122259.     CrossRef
  • Imbalanced intracellular nutrient stoichiometries drive the regional structural variation of microeukaryotic communities in paddy fields
    Pengfei Sun, Eleonora Silvano, Yin Chen, Yonghong Wu
    ISME Communications.2024;[Epub]     CrossRef
  • New Alpiniamide‐Type Polyketide with Antibiofilm Activities from the Marine‐Derived Streptomyces sp. ZS‐A65
    Fanqi Pu, Jiebin Fang, Wenshuo Li, Bin Zhang, Xinyi Hong, Lei Xu, Xihui Li, Yongjun Jiang
    Chemistry & Biodiversity.2024;[Epub]     CrossRef
  • In vitro inhibition of Pseudomonas aeruginosa PAO1 biofilm formation by DZ2002 through regulation of extracellular DNA and alginate production
    Jiaze Dai, Wenying Luo, Fei Hu, Si Li
    Frontiers in Cellular and Infection Microbiology.2024;[Epub]     CrossRef
  • A bacterial sense of touch: T4P retraction motor as a means of surface sensing by Pseudomonas aeruginosa PA14
    C. J. Geiger, G. C. L. Wong, G. A. O'Toole, Michael Y. Galperin
    Journal of Bacteriology.2024;[Epub]     CrossRef
  • Micro-biophysical interactions at bacterium-mineral interfaces determine potassium dissolution
    Miao Han, Xiaoyan Zhu, Chujin Ruan, Hanqing Wu, Guowei Chen, Kun Zhu, Ying Liu, Gang Wang
    Environmental Technology & Innovation.2024; 33: 103524.     CrossRef
  • Decoding the influence of low temperature on biofilm development: The hidden roles of c-di-GMP
    Yu-Ting Lin, Yong-Chao Wang, Yi-Mei Xue, Zhen Tong, Guan-Yu Jiang, Xu-Rui Hu, John C. Crittenden, Can Wang
    Science of The Total Environment.2024; 927: 172376.     CrossRef
  • Screening and functional characterization of isocitrate lyase AceA in the biofilm formation of Vibrio alginolyticus
    Weibo Shi, Ya Li, Weiwei Zhang, Jennifer F. Biddle
    Applied and Environmental Microbiology.2024;[Epub]     CrossRef
  • Acinetobacter baumannii as an oro-dental pathogen: a red alert!!
    A. S. Smiline GIRIJA
    Journal of Applied Oral Science.2024;[Epub]     CrossRef
  • Vitamin D and vitamin K1 as novel inhibitors of biofilm in Gram-negative bacteria
    Lekaa L. Lutfi, Mona I. Shaaban, Soha Lotfy Elshaer
    BMC Microbiology.2024;[Epub]     CrossRef
  • The effect of antibacterial peptide ε-Polylysine against Pseudomonas aeruginosa biofilm in marine environment
    Siwei Wu, Quantong Jiang, Dongzhu Lu, Xiaofan Zhai, Jizhou Duan, Baorong Hou
    npj Materials Degradation.2024;[Epub]     CrossRef
  • Determination of biofilm formation, antibiotic susceptibility profiles and quorum sensing mediated virulence factors in ceftazidime resistant Pseudomonas aeruginosa
    Ceren Başkan, Tuba Yıldırım, Melek Bilgin, Hülya Sivas
    Biologia.2023; 78(10): 2881.     CrossRef
  • Pharmacological Characters and Toxicity Evaluation of Coumarin Derivative LP4C as Lead Compound against Biofilm Formation of Pseudomonas aeruginosa
    Moxi Yu, Jiajia Xin, Yongsheng Liu, Yamiao Chen, Hui Zhao, Yaoyao Li, Yachen Hou, Min Jia, Bin Wang, Mingkai Li
    Molecules.2023; 28(7): 3138.     CrossRef
  • Respiratory culture organism isolation and test characteristics in children with tracheostomies with and without acute respiratory infection
    Rebecca Steuart, Guillermo B. Ale, Abigail Woolums, Nicole Xia, Dan Benscoter, Christopher J. Russell, Samir S. Shah, Joanna Thomson
    Pediatric Pulmonology.2023; 58(5): 1481.     CrossRef
  • Exopolysaccharide produced by Lactiplantibacillus plantarum Y12 exhibits inhibitory effect on the Shigella flexneri genes expression related to biofilm formation
    Yinglong Song, Mengying Sun, Guangqing Mu, Yanfeng Tuo
    International Journal of Biological Macromolecules.2023; 253: 127048.     CrossRef
  • Migration of rare and abundant species, assembly mechanisms, and ecological networks of microbiomes in drinking water treatment plants: Effects of different treatment processes
    Wenjun Sun, Zibo Jing
    Journal of Hazardous Materials.2023; 457: 131726.     CrossRef
  • Antimicrobial Activity of Identified Ubiquitin-40S Ribosomal Protein S27a (RPS27A), Ubiquitin-like Protein Fubi, and Ribosomal Protein (S30FAU) in the Starry Flounder (Platichthys stellatus)
    Ha-Jeong Son, Gyoungsik Kang, Won-Sik Woo, Kyung-Ho Kim, Min-Young Sohn, Jong-Won Park, Dain Lee, Chan-Il Park
    Fishes.2023; 8(4): 187.     CrossRef
  • Microbiological patterns of bacterial infections in tracheostomized children: Reducing uncertainty in continuous care
    Miguel García‐Boyano, Francisco José Climent Alcalá, Aroa Rodríguez Alonso, Marta García Fernández de Villalta, Oihane Zubiaur Alonso, Ignacio Rabanal Retolaza, Inmaculada Quiles Melero, Cristina Calvo, Luis Escosa García
    Pediatric Pulmonology.2023; 58(12): 3507.     CrossRef
  • Compounds That Have an Anti-Biofilm Effect against Common Bacteria at Very Low Concentrations and Their Antibiotic Combination Effect
    Hyeon-Ji Hwang, Dan-dan Li, Jieun Lee, Min Kyung Kang, Hyung Ryong Moon, Joon-Hee Lee
    Antibiotics.2023; 12(5): 853.     CrossRef
  • Research Progress of Staphylococcus aureus Biofilm
    良 薛
    Advances in Clinical Medicine.2023; 13(05): 7729.     CrossRef
  • Inhibitory effect of resveratrol on swimming motility and adhesion ability against Salmonella enterica serovar Typhimurium infection
    Fei Lou, Kunli Wang, Yunfeng Hou, Xiaolei Shang, Fayin Tang
    Microbial Pathogenesis.2023; 184: 106323.     CrossRef
  • An unanticipated discovery of novel naphthalimidopropanediols as potential broad-spectrum antibacterial members
    Peng-Li Zhang, Mouna Hind Laiche, Yan-Liang Li, Wei-Wei Gao, Jian-Mei Lin, Cheng-He Zhou
    European Journal of Medicinal Chemistry.2022; 241: 114657.     CrossRef
  • Treatment of Pseudomonas aeruginosa infectious biofilms: Challenges and strategies
    Rui Yin, Juanli Cheng, Jingyao Wang, Panxin Li, Jinshui Lin
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • In vitro virulence activity of Pseudomonas aeruginosa, enhanced by either Acinetobacter baumannii or Enterococcus faecium through the polymicrobial interactions
    Ghazale Laliany, Saeid Amel Jamehdar, Ali Makhdoumi
    Archives of Microbiology.2022;[Epub]     CrossRef
  • In vitro visualization and quantitative characterization of Pseudomonas aeruginosa biofilm growth dynamics on polyether ether ketone
    Carole S. L. Spake, Ellis M. Berns, Lori Sahakian, Adrian Turcu, Ahsia Clayton, Jillian Glasser, Caitlin Barrett, Douglas Barber, Valentin Antoci, Christopher T. Born, Dioscaris R. Garcia
    Journal of Orthopaedic Research.2022; 40(10): 2448.     CrossRef
  • Infecciones en úlceras de pie diabético: diagnóstico, microbiológico y tratamiento
    Lucila Gómez, Carlos Tejeda Perez, Cesar Palacio Peñaloza, Angie Tavera Medina, Nayarith Maldonado Ramírez, Alfonso Bettin Martínez, Carlos Beltrán Sanchez
    Revista Ciencias Biomédicas.2022; 11(1): 50.     CrossRef
  • Geographic imprint and ecological functions of the abiotic component of periphytic biofilms
    Pengfei Sun, Yingyao Liu, Rui Sun, Yonghong Wu, Jan Dolfing
    iMeta.2022;[Epub]     CrossRef
  • The Chemical Structure Properties and Promoting Biofilm Activity of Exopolysaccharide Produced by Shigella flexneri
    Yinglong Song, Fenglian Ma, Mengying Sun, Guangqing Mu, Yanfeng Tuo
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Synthesis and Biological Evaluation of 3-(Pyridine-3-yl)-2-Oxazolidinone Derivatives as Antibacterial Agents
    Bo Jin, Tong Wang, Jia-yi Chen, Xiao-qing Liu, Yi-xin Zhang, Xiu-ying Zhang, Zun-lai Sheng, Hong-Liang Yang
    Frontiers in Chemistry.2022;[Epub]     CrossRef
  • Involvement of the Actinobacillus pleuropneumoniae ompW Gene in Confrontation of Environmental Pressure
    Xiabing Chen, Zhiyong Shao, Lijun Wu, Bin He, Wenhai Yang, Jie Chen, Erguang Jin, Qi Huang, Liancheng Lei, Jiajia Xu, Haotian Li, Hui Zhang, Yun Wan, Wu Liu, Rui Zhou
    Frontiers in Veterinary Science.2022;[Epub]     CrossRef
  • Potential spoilage of extended shelf-life (ESL) milk by Bacillus subtilis and Bacillus velezensis
    James A. Elegbeleye, Elna M. Buys
    LWT.2022; 153: 112487.     CrossRef
  • Periphytic biofilms function as a double‐edged sword influencing nitrogen cycling in paddy fields
    Pengfei Sun, Yin Chen, Junzhuo Liu, Ying Xu, Lei Zhou, Yonghong Wu
    Environmental Microbiology.2022; 24(12): 6279.     CrossRef
  • Anthranilate Acts as a Signal to Modulate Biofilm Formation, Virulence, and Antibiotic Tolerance of Pseudomonas aeruginosa and Surrounding Bacteria
    Hyeon-Ji Hwang, Xi-Hui Li, Soo-Kyoung Kim, Joon-Hee Lee, Cezar M. Khursigara
    Microbiology Spectrum.2022;[Epub]     CrossRef
  • Coexistence of antibiotic resistance genes, fecal bacteria, and potential pathogens in anthropogenically impacted water
    Xiang-Long Zhao, Zhao Qi, Hao Huang, Jian Tu, Xiang-Jun Song, Ke-Zong Qi, Ying Shao
    Environmental Science and Pollution Research.2022; 29(31): 46977.     CrossRef
  • Pharmaceutical strategies for the treatment of bacterial biofilms in chronic wounds
    Karan Razdan, Jorge Garcia-Lara, V.R. Sinha, Kamalinder K. Singh
    Drug Discovery Today.2022; 27(8): 2137.     CrossRef
  • Biofilm Maintenance as an Active Process: Evidence that Biofilms Work Hard to Stay Put
    Stefan Katharios-Lanwermeyer, G. A. O’Toole, Michael Y. Galperin
    Journal of Bacteriology.2022;[Epub]     CrossRef
  • Prevention and Eradication of Biofilm by Dendrimers: A Possibility Still Little Explored
    Silvana Alfei, Debora Caviglia
    Pharmaceutics.2022; 14(10): 2016.     CrossRef
  • Periphytic biofilms accumulate manganese, intercepting its emigration from paddy soil
    Pengfei Sun, Mengning Gao, Rui Sun, Yonghong Wu, Jan Dolfing
    Journal of Hazardous Materials.2021; 411: 125172.     CrossRef
  • Transcriptome Analysis of Pseudomonas aeruginosa Biofilm Following the Exposure to Malaysian Stingless Bee Honey
    Nesrin Seder, Mohd Hilmi Abu Bakar, Walid Salem Abu Rayyan
    Advances and Applications in Bioinformatics and Chemistry.2021; Volume 14: 1.     CrossRef
  • Antipathogenic Compounds That Are Effective at Very Low Concentrations and Have Both Antibiofilm and Antivirulence Effects against Pseudomonas aeruginosa
    Hyeon-Ji Hwang, Heejeong Choi, Sojeong Hong, Hyung Ryong Moon, Joon-Hee Lee, Amanda G. Oglesby
    Microbiology Spectrum.2021;[Epub]     CrossRef
  • Agent Based Models of Polymicrobial Biofilms and the Microbiome—A Review
    Sherli Koshy-Chenthittayil, Linda Archambault, Dhananjai Senthilkumar, Reinhard Laubenbacher, Pedro Mendes, Anna Dongari-Bagtzoglou
    Microorganisms.2021; 9(2): 417.     CrossRef
  • Microbial biofilm ecology, in silico study of quorum sensing receptor-ligand interactions and biofilm mediated bioremediation
    Biji Balan, Amit S. Dhaulaniya, Diksha A. Varma, Kushneet K. Sodhi, Mohit Kumar, Manisha Tiwari, Dileep Kumar Singh
    Archives of Microbiology.2021; 203(1): 13.     CrossRef
  • Characterization of Binary Biofilms of Listeria monocytogenes and Lactobacillus and Their Response to Chlorine Treatment
    Magdalena A. Olszewska, Francisco Diez-Gonzalez
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Relevance of Biofilm Models in Periodontal Research: From Static to Dynamic Systems
    María Carmen Sánchez, Andrea Alonso-Español, Honorato Ribeiro-Vidal, Bettina Alonso, David Herrera, Mariano Sanz
    Microorganisms.2021; 9(2): 428.     CrossRef
  • Comparison of techniques for counting prokaryotes in marine planktonic and biofilm samples
    Vanessa Ochi Agostini, Letícia Terres Rodrigues, Alexandre José Macedo, Erik Muxagata
    Scientia Marina.2021; 85(3): 211.     CrossRef
  • Real-time monitoring of Pseudomonas aeruginosa biofilm growth dynamics and persister cells’ eradication
    Miglė Žiemytė, Miguel Carda-Diéguez, Juan C. Rodríguez-Díaz, Maria P. Ventero, Alex Mira, María D. Ferrer
    Emerging Microbes & Infections.2021; 10(1): 2062.     CrossRef
  • The serine protease HtrA plays a key role in heat-induced dispersal of pneumococcal biofilms
    Yashuan Chao, Caroline Bergenfelz, Renhua Sun, Xiao Han, Adnane Achour, Anders P. Hakansson
    Scientific Reports.2020;[Epub]     CrossRef
  • Further understanding of Pseudomonas aeruginosa’s ability to horizontally acquire virulence: possible intervention strategies
    James Redfern, Mark C. Enright
    Expert Review of Anti-infective Therapy.2020; 18(6): 539.     CrossRef
  • Coordinated regulation of anthranilate metabolism and bacterial virulence by the GntR family regulator MpaR in Pseudomonas aeruginosa
    Tietao Wang, Yihang Qi, Zhihan Wang, Jingru Zhao, Linxuan Ji, Jun Li, Zhao Cai, Liang Yang, Min Wu, Haihua Liang
    Molecular Microbiology.2020; 114(5): 857.     CrossRef
  • Biofilm and Quorum sensing mediated pathogenicity in Pseudomonas aeruginosa
    Kathirvel Brindhadevi, Felix LewisOscar, Eleftherios Mylonakis, Sabarathinam Shanmugam, Tikendra Nath Verma, Arivalagan Pugazhendhi
    Process Biochemistry.2020; 96: 49.     CrossRef
  • Thermoregulation of Pseudomonas aeruginosa Biofilm Formation
    Suran Kim, Xi-Hui Li, Hyeon-Ji Hwang, Joon-Hee Lee, Danilo Ercolini
    Applied and Environmental Microbiology.2020;[Epub]     CrossRef
  • Inhibitors of Antibiotic Resistance Mechanisms: Clinical Applications and Future Perspectives
    Barbara Parrino, Daniela Carbone, Girolamo Cirrincione, Patrizia Diana, Stella Cascioferro
    Future Medicinal Chemistry.2020; 12(5): 357.     CrossRef
  • Microbial Biosurfactants in Cosmetic and Personal Skincare Pharmaceutical Formulations
    Simms A. Adu, Patrick J. Naughton, Roger Marchant, Ibrahim M. Banat
    Pharmaceutics.2020; 12(11): 1099.     CrossRef
  • Novel eradication methods for Staphylococcus aureus biofilm in poultry farms and abattoirs using disinfectants loaded onto silver and copper nanoparticles
    Mona M. Elsayed, Fatma A. Elgohary, Amira I. Zakaria, Rasha M. Elkenany, Ayman Y. EL-Khateeb
    Environmental Science and Pollution Research.2020; 27(24): 30716.     CrossRef
  • Oxidative stress under low oxygen conditions triggers hyperflagellation and motility in the Antarctic bacterium Pseudomonas extremaustralis
    Esmeralda C. Solar Venero, Martiniano M. Ricardi, María Gomez-Lozano, Søren Molin, Paula M. Tribelli, Nancy I. López
    Extremophiles.2019; 23(5): 587.     CrossRef
  • Synthesis and characterization of chitosan oligosaccharide-capped gold nanoparticles as an effective antibiofilm drug against the Pseudomonas aeruginosa PAO1
    Fazlurrahman Khan, Jang-Won Lee, Panchanathan Manivasagan, Dung Thuy Nguyen Pham, Junghwan Oh, Young-Mog Kim
    Microbial Pathogenesis.2019; 135: 103623.     CrossRef
  • Physico-chemical characterization of caesium and strontium using fluorescent intensity of bacteria in a microfluidic platform
    Changhyun Roh, Thi Toan Nguyen, Jae-Jin Shim, Chankyu Kang
    Royal Society Open Science.2019; 6(5): 182069.     CrossRef
  • Perspectives towards antibiotic resistance: from molecules to population
    Joon-Hee Lee
    Journal of Microbiology.2019; 57(3): 181.     CrossRef
  • Theaflavin-3,3′-Digallate Suppresses Biofilm Formation, Acid Production, and Acid Tolerance in Streptococcus mutans by Targeting Virulence Factors
    Sa Wang, Yuan Wang, Ying Wang, Zhuhui Duan, Zongxin Ling, Wenzhi Wu, Suman Tong, Huiming Wang, Shuli Deng
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Rhamnolipid-involved antibiotics combinations improve the eradication of Helicobacter pylori biofilm in vitro: A comparison with conventional triple therapy
    Xiaonan Chen, Pengyu Li, Yuanna Shen, Yiqing Zou, Gang Yuan, Haiyan Hu
    Microbial Pathogenesis.2019; 131: 112.     CrossRef
  • Biofilm Disruption Utilizing α/β Chimeric Polypeptide Molecular Brushes
    Si Zhang, Xi-Mian Xiao, Fan Qi, Peng-Cheng Ma, Wei-Wei Zhang, Cheng-Zhi Dai, Dan-Feng Zhang, Run-Hui Liu
    Chinese Journal of Polymer Science.2019; 37(11): 1105.     CrossRef
  • Circular pellicles formed by Pseudomonas alkylphenolica KL28 are a sophisticated architecture principally designed by matrix substance
    Myeong Mi Song, Yaligara Veeranagouda, Munkhtsatsral Ganzorig, Kyoung Lee
    Journal of Microbiology.2018; 56(11): 790.     CrossRef
  • Recent perspectives on the molecular basis of biofilm formation by Pseudomonas aeruginosa and approaches for treatment and biofilm dispersal
    Sinosh Skariyachan, Vaishnavi Sneha Sridhar, Swathi Packirisamy, Supreetha Toplar Kumargowda, Sneha Basavaraj Challapilli
    Folia Microbiologica.2018; 63(4): 413.     CrossRef
  • Pseudomonas aeruginosaBiofilms: Host Response and Clinical Implications in Lung Infections
    Nicholas M. Maurice, Brahmchetna Bedi, Ruxana T. Sadikot
    American Journal of Respiratory Cell and Molecular Biology.2018; 58(4): 428.     CrossRef
  • Antibiofilm effect of biofilm-dispersing agents on clinical isolates of Pseudomonas aeruginosa with various biofilm structures
    Soo-Kyoung Kim, Xi-Hui Li, Hyeon-Ji Hwang, Joon-Hee Lee
    Journal of Microbiology.2018; 56(12): 902.     CrossRef
  • Molecules and Mechanisms Underlying the Antimicrobial Activity of Escapin, anl-Amino Acid Oxidase from the Ink of Sea Hares
    Charles D. Derby, Eric S. Gilbert, Phang C. Tai
    The Biological Bulletin.2018; 235(1): 52.     CrossRef
  • PAMDB: a comprehensive Pseudomonas aeruginosa metabolome database
    Weiliang Huang, Luke K Brewer, Jace W Jones, Angela T Nguyen, Ana Marcu, David S Wishart, Amanda G Oglesby-Sherrouse, Maureen A Kane, Angela Wilks
    Nucleic Acids Research.2018; 46(D1): D575.     CrossRef
  • Interdependence between iron acquisition and biofilm formation in Pseudomonas aeruginosa
    Donghoon Kang, Natalia V. Kirienko
    Journal of Microbiology.2018; 56(7): 449.     CrossRef
  • Sensitizing bacterial cells to antibiotics by shape recovery triggered biofilm dispersion
    Sang Won Lee, Huan Gu, James Bryan Kilberg, Dacheng Ren
    Acta Biomaterialia.2018; 81: 93.     CrossRef
  • Controlling of microbial biofilms formation: Anti- and probiofilm agents
    V. K. Plakunov, S. V. Mart’yanov, N. A. Teteneva, M. V. Zhurina
    Microbiology.2017; 86(4): 423.     CrossRef
  • Effect of bacterial components of mixed culture supernatants of planktonic and biofilm Pseudomonas aeruginosa with commensal Escherichia coli on the neutrophil response in vitro
    Irina L Maslennikova, Marina V Kuznetsova, Irina V Nekrasova, Sergei V Shirshev
    Pathogens and Disease.2017;[Epub]     CrossRef
  • Mutation of the cyclic di-GMP phosphodiesterase gene in Burkholderia lata SK875 attenuates virulence and enhances biofilm formation
    Hae-In Jung, Yun-Jung Kim, Yun-Jung Lee, Hee-Soo Lee, Jung-Kee Lee, Soo-Ki Kim
    Journal of Microbiology.2017; 55(10): 800.     CrossRef
  • Relative susceptibility of airway organisms to antimicrobial effects of nitric oxide
    Alan D. Workman, Ryan M. Carey, Michael A. Kohanski, David W. Kennedy, James N. Palmer, Nithin D. Adappa, Noam A. Cohen
    International Forum of Allergy & Rhinology.2017; 7(8): 770.     CrossRef
  • Mechanisms and Regulation of Extracellular DNA Release and Its Biological Roles in Microbial Communities
    Alejandra L. Ibáñez de Aldecoa, Olga Zafra, José E. González-Pastor
    Frontiers in Microbiology.2017;[Epub]     CrossRef
  • Biofilm dispersal: multiple elaborate strategies for dissemination of bacteria with unique properties
    Cyril Guilhen, Christiane Forestier, Damien Balestrino
    Molecular Microbiology.2017; 105(2): 188.     CrossRef
  • Phage “delay” towards enhancing bacterial escape from biofilms: a more comprehensive way of viewing resistance to bacteriophages
    Stephen T. Abedon
    AIMS Microbiology.2017; 3(2): 186.     CrossRef
  • Antibiofilm agents: A new perspective for antimicrobial strategy
    Xi-Hui Li, Joon-Hee Lee
    Journal of Microbiology.2017; 55(10): 753.     CrossRef
  • The Social Life of Aeromonas through Biofilm and Quorum Sensing Systems
    Emilie Talagrand-Reboul, Estelle Jumas-Bilak, Brigitte Lamy
    Frontiers in Microbiology.2017;[Epub]     CrossRef
  • Synthetic biology engineering of biofilms as nanomaterials factories
    Peter Q. Nguyen
    Biochemical Society Transactions.2017; 45(3): 585.     CrossRef
  • Anti-biofilm effects of anthranilate on a broad range of bacteria
    Xi-Hui Li, Soo-Kyoung Kim, Joon-Hee Lee
    Scientific Reports.2017;[Epub]     CrossRef
  • Rhamnolipids Mediate an Interspecies Biofilm Dispersal Signaling Pathway
    Arunima Bhattacharjee, Tyler D. Nusca, Allon I. Hochbaum
    ACS Chemical Biology.2016; 11(11): 3068.     CrossRef
  • Human upper airway epithelium produces nitric oxide in response to Staphylococcus epidermidis
    Ryan M. Carey, Bei Chen, Nithin D. Adappa, James N. Palmer, David W. Kennedy, Robert J. Lee, Noam A. Cohen
    International Forum of Allergy & Rhinology.2016; 6(12): 1238.     CrossRef
  • N‐acetylcysteine eradicates Pseudomonas aeruginosa biofilms in bone cement
    Mehmet Emin Onger, Hasan Gocer, Dilek Emir, Suleyman Kaplan
    Scanning.2016; 38(6): 766.     CrossRef
  • Plasticity of Candida albicans Biofilms
    David R. Soll, Karla J. Daniels
    Microbiology and Molecular Biology Reviews.2016; 80(3): 565.     CrossRef
[MINIREVIEW] Interdependence between iron acquisition and biofilm formation in Pseudomonas aeruginosa
Donghoon Kang , Natalia V. Kirienko
J. Microbiol. 2018;56(7):449-457.   Published online June 14, 2018
DOI: https://doi.org/10.1007/s12275-018-8114-3
  • 402 View
  • 1 Download
  • 93 Crossref
AbstractAbstract PDF
Bacterial biofilms remain a persistent threat to human healthcare due to their role in the development of antimicrobial resistance. To combat multi-drug resistant pathogens, it is crucial to enhance our understanding of not only the regulation of biofilm formation, but also its contribution to bacterial virulence. Iron acquisition lies at the crux of these two subjects. In this review, we discuss the role of iron acquisition in biofilm formation and how hosts impede this mechanism to defend against pathogens. We also discuss recent findings that suggest that biofilm formation can also have the reciprocal effect, influencing siderophore production and iron sequestration.

Citations

Citations to this article as recorded by  
  • Understanding gallium oxyhydroxide surface for improving titanium-based biomaterial applications
    Harigovind Nandhakumar, Adithyakrishnan Kapparath, Ansheed Raheem, Praveenkumar Kesavan, Arunima Rajan, Kateřina Skotnicová, Geetha Manivasagam, Balakrishnan Shankar, Jithin Vishnu
    Colloids and Surfaces A: Physicochemical and Engineering Aspects.2026; 728: 138689.     CrossRef
  • Anti-motilities and anti-biofilm effects of Ageratum conyzoides L. methanol extract
    Eli Compaoré, Moussa Compaoré, Vincent Ouédraogo, Ablassé Rouamba, Alimata Bancé, Mignini R. Dofini, Martin Kiendrebeogo
    Journal of Medicinal Plants for Economic Development.2025;[Epub]     CrossRef
  • γ Irradiation Alters the Staphylococcus aureus Proteome and Enhances Pathogenicity
    Jingjing Liu, Xinghua Jin, Jingxin Zhu, Jundong Feng, Jian Zhao, Yixuan Wang, Quan Wang, Xiaofeng Song
    Journal of Proteome Research.2025; 24(3): 1373.     CrossRef
  • An astrobiological perspective on microbial biofilms: their importance for habitability and production of detectable and lasting biosignatures
    Sarah Gonzalez-Henao, Matthew O. Schrenk, Betül Kaçar
    Applied and Environmental Microbiology.2025;[Epub]     CrossRef
  • Inhibitory Effects of Nisin and Gallium (III) Nitrate Hydrate on Planktonic and Adhered Cells and Implications for the Viable but Non-Culturable State
    Valeria Poscente, Luciana Di Gregorio, Roberta Bernini, Annamaria Bevivino
    Microorganisms.2025; 13(2): 276.     CrossRef
  • Hemolytic Streptococcus agalactiae isolation and identification from the Southern Mediterranean Sea and effect on growth- and biofilm-forming ability under stressful environment
    Imen Laadouze, Noussaiha Salhi, Ibtissem Khouja, Emna Grami, Kathleen Sullivan Sealey, Neila Saidi
    Euro-Mediterranean Journal for Environmental Integration.2025; 10(5): 4133.     CrossRef
  • Feature-Based Molecular Networking Guided Characterization of Clonocoprogen Siderophores with Anti-Pseudomonas aeruginosa Activity in Nematodes through Immune Up-Regulating Effects
    Guoliang Zhu, Weize Yuan, Kun Wang, Huimin Wu, Kangjie Lv, Xinye Wang, Alex Tuffour, Biao Ren, Jingyu Zhang, Chenglin Jiang, Yi Jiang, Tom Hsiang, Peter Shen Yu, Frederick M Ausubel, Lixin Zhang, Huanqin Dai, Xueting Liu
    ACS Chemical Biology.2025; 20(7): 1450.     CrossRef
  • Modern approaches to the treatment of infections caused by Pseudomonas aeruginosa with multiple antimicrobial resistance. What a practicing physician should know
    Natalia Yu. Epifanova
    Supportive Therapy in Oncology.2025; 2(2): 44.     CrossRef
  • Neutrophil membrane-encapsulated nanosonosensitizer with ultrasound-reinforced ferroptosis in Pseudomonas aeruginosa pneumonia
    Chunhong Du, Shuai Wang, Yijie Cheng, Jie Li, Yufei Zhang, Zhuohao Li, Baolin Zhu, Zhongming Wu, Xinge Zhang, Lingyi Zhou
    Journal of Nanobiotechnology.2025;[Epub]     CrossRef
  • Corrosion of AISI 1030 mild steel is influenced by bacteria type, oxygen availability, and biofilm formation under controlled laboratory conditions
    Phuong Nguyen Tran, Agnes A Michalczyk, Rainier A Catubig, Jess Glasson, Jhonatan Soto Puelles, Mahdi Ghorbani, Anthony E Somers, Maria Forsyth, Margaret Leigh Ackland
    Journal of Applied Microbiology.2025;[Epub]     CrossRef
  • The DOPA Scaffold: Tracing Catechol Chemistry from Prebiotic Earth to Cognitive Agency
    Amal Alachkar
    Progress in Biophysics and Molecular Biology.2025;[Epub]     CrossRef
  • Metal chelation as an antibacterial strategy for Pseudomonas aeruginosa and Acinetobacter baumannii
    Martina M. Golden, Amelia C. Heppe, Cassandra L. Zaremba, William M. Wuest
    RSC Chemical Biology.2024; 5(11): 1083.     CrossRef
  • Iron transport pathways in the human malaria parasite Plasmodium falciparum revealed by RNA-sequencing
    Juliane Wunderlich, Vadim Kotov, Lasse Votborg-Novél, Christina Ntalla, Maria Geffken, Sven Peine, Silvia Portugal, Jan Strauss
    Frontiers in Cellular and Infection Microbiology.2024;[Epub]     CrossRef
  • Taxonomic and functional characterization of biofilms from a photovoltaic panel reveals high genetic and metabolic complexity of the communities
    Viviane Faria Morais Jotta, Glen Jasper Yupanqui García, Paula Luize Camargos Fonseca, Angela de Mello Ferreira, Vasco Azevedo, Bertram Brenig, Aristóteles Góes-Neto, Fernanda Badotti
    Journal of Applied Microbiology.2024;[Epub]     CrossRef
  • Global transcriptome analysis of Pseudomonas aeruginosa NT06 response to potassium chloride, sodium lactate, sodium citrate, and microaerophilic conditions in a fish ecosystem
    Natalia Tomaś, Kamila Myszka, Łukasz Wolko, Wojciech Juzwa
    FEMS Microbiology Letters.2024;[Epub]     CrossRef
  • Compassionate use of cefiderocol in a complex case of extensively drug-resistant Acinetobacter baumannii fracture-related infection: a comprehensive approach and multidisciplinary management
    Flavia Petrucci, Beatrice Perciballi, Marco Rivano Capparuccia, Giancarlo Iaiani, Federico Lo Torto, Diego Ribuffo, Stefano Gumina, Daniele De Meo
    Infection.2024; 52(6): 2487.     CrossRef
  • Ultrafiltration (UF) and biological oxygen-dosed activated carbon (BODAC) filtration to prevent fouling of reversed osmosis (RO) membranes: A mass balance analysis
    Sara Ribeiro Pinela, Amanda Larasati, Roel J.W. Meulepas, Maria Cristina Gagliano, Robbert Kleerebezem, Harry Bruning, Huub H.M. Rijnaarts
    Journal of Water Process Engineering.2024; 57: 104648.     CrossRef
  • Deferiprone-Gallium-Protoporphyrin Chitogel Decreases Pseudomonas aeruginosa Biofilm Infection without Impairing Wound Healing
    Tahlia L. Kennewell, Hanif Haidari, Suzanne Mashtoub, Gordon S. Howarth, Catherine Bennett, Clare M. Cooksley, Peter John Wormald, Allison J. Cowin, Sarah Vreugde, Zlatko Kopecki
    Materials.2024; 17(4): 793.     CrossRef
  • Antimicrobial activity of iron-depriving pyoverdines against human opportunistic pathogens
    Vera Vollenweider, Karoline Rehm, Clara Chepkirui, Manuela Pérez-Berlanga, Magdalini Polymenidou, Jörn Piel, Laurent Bigler, Rolf Kümmerli
    eLife.2024;[Epub]     CrossRef
  • Influence of carbonyl cyanide m-chlorophenyl hydrazone on biofilm dynamics, protease, and siderophore production by Burkholderia pseudomallei
    Glaucia Morgana de Melo Guedes, Crister José Ocadaque, Bruno Rocha Amando, Alyne Soares Freitas, Vinicius Carvalho Pereira, Rossana de Aguiar Cordeiro, Silviane Praciano Bandeira, Pedro Filho Noronha Souza, Marcos Fábio Gadelha Rocha, José Júlio Costa Sid
    Biofouling.2024; 40(8): 514.     CrossRef
  • Siderophores: A Case Study in Translational Chemical Biology
    Andrew R. LeBlanc, William M. Wuest
    Biochemistry.2024; 63(15): 1877.     CrossRef
  • Pseudomonas aeruginosa kills Staphylococcus aureus in a polyphosphate-dependent manner
    Ritika Shah, Julius Kwesi Narh, Magdalena Urlaub, Olivia Jankiewicz, Colton Johnson, Barry Livingston, Jan-Ulrik Dahl, Craig D. Ellermeier
    mSphere.2024;[Epub]     CrossRef
  • Deferiprone and Gallium-Protoporphyrin Chitogel as an antimicrobial treatment: Preclinical studies demonstrating antimicrobial activity for S. aureus infected cutaneous wounds
    T.L. Kennewell, H. Haidari, S. Mashtoub, G.S. Howarth, P.J. Wormald, A.J. Cowin, S. Vreugde, Z. Kopecki
    International Journal of Biological Macromolecules.2024; 276: 133874.     CrossRef
  • In vitro lung epithelial cell model reveals novel roles for Pseudomonas aeruginosa siderophores
    Donghoon Kang, Qi Xu, Natalia V. Kirienko, Giordano Rampioni
    Microbiology Spectrum.2024;[Epub]     CrossRef
  • In vitro effect of the iron chelator deferiprone on the antimicrobial susceptibility and biofilms of Burkholderia pseudomallei
    Glaucia Morgana de Melo Guedes, Késia Veras Costa Ribeiro, Emanuela Silva de Araújo, Vinícius Carvalho Pereira, Ana Carla de Castro Freitas Soares, Alyne Soares Freitas, Rossana de Aguiar Cordeiro, José Júlio Costa Sidrim, Marcos Fábio Gadelha Rocha, Débo
    Biofouling.2023; 39(2): 135.     CrossRef
  • Gallium-enabled bactericidal medicine
    Yong Liu, Fei Yang, Zixin Pan, Zhenzhen Fu, Xiaoli Jiang, Zhenping Cao, Juanjuan Li, Hao Wang
    Materials Today.2023; 67: 548.     CrossRef
  • Study on the inhibitory effect of quercetin combined with gentamicin on the formation of Pseudomonas aeruginosa and its bioenvelope
    Shuangyan Luo, Xinyun Kang, Xiaofeng Luo, Caixia Li, Guiqin Wang
    Microbial Pathogenesis.2023; 182: 106274.     CrossRef
  • Antibiofilm activity of promethazine, deferiprone, and Manuka honey in an ex vivo wound model
    Gláucia Morgana de Melo Guedes, Alyne Soares Freitas, Rodrigo Machado Pinheiro, Vinicius Carvalho Pereira, Carliane Melo Alves Melgarejo, Emanuela Silva de Araujo, Késia Veras Costa Ribeiro, Silviane Praciano Bandeira, Rossana de Aguiar Cordeiro, Marcos F
    Letters in Applied Microbiology.2023;[Epub]     CrossRef
  • Absence of proline-peptide transporter YjiY in Salmonella Typhimurium leads to secretion of factors which inhibits intra-species biofilm formation
    Kasturi Chandra, Abhilash Vijay Nair, Ritika Chatterjee, Prerana Muralidhara, Anmol Singh, Sathisha Kamanna, Utpal S. Tatu, Dipshikha Chakravortty
    Microbiological Research.2023; 273: 127411.     CrossRef
  • Study on pyoverdine and biofilm production with detection of LasR gene in MDR Pseudomonas aeruginosa
    Esraa H. Hamza, Ashraf M. El-Shawadfy, Ayman A. Allam, Wesam A. Hassanein
    Saudi Journal of Biological Sciences.2023; 30(1): 103492.     CrossRef
  • Mobilization of iron stored in bacterioferritin, a new target for perturbing iron homeostasis and developing antibacterial and antibiofilm molecules
    Mario Rivera
    Journal of Inorganic Biochemistry.2023; 247: 112306.     CrossRef
  • Novel marine metalloprotease—new approaches for inhibition of biofilm formation of Stenotrophomonas maltophilia
    Marie Kristin Peters, Yekaterina Astafyeva, Yuchen Han, Jascha F. H. Macdonald, Daniela Indenbirken, Jacqueline Nakel, Sanamjeet Virdi, Guido Westhoff, Wolfgang R. Streit, Ines Krohn
    Applied Microbiology and Biotechnology.2023; 107(23): 7119.     CrossRef
  • Legionella pneumophila Rhizoferrin Promotes Bacterial Biofilm Formation and Growth within Amoebae and Macrophages
    Alberto E. Lopez, Lubov S. Grigoryeva, Armando Barajas, Nicholas P. Cianciotto, Craig R. Roy
    Infection and Immunity.2023;[Epub]     CrossRef
  • The action of phytochemicals in biofilm control
    Ariana S. C. Gonçalves, Miguel M. Leitão, Manuel Simões, Anabela Borges
    Natural Product Reports.2023; 40(3): 595.     CrossRef
  • Virulence-associated genes and antimicrobial resistance patterns in bacteria isolated from pregnant and nonpregnant women with urinary tract infections: the risk of neonatal sepsis
    Uriel A. Angulo-Zamudio, Hector Flores-Villaseñor, Nidia Leon-Sicairos, Dina Zazueta-Armenta, Francisco A. Martínez-Villa, Gabriela Tapia-Pastrana, Jorge Angulo-Rocha, Joel Murillo-Llanes, Mario Francisco Barajas-Olivas, Adrian Canizalez-Roman
    Canadian Journal of Microbiology.2023; 69(12): 488.     CrossRef
  • Insight into the Global Negative Regulation of Iron Scavenger 7-HT Biosynthesis by the SigW/RsiW System in Pseudomonas donghuensis HYS
    Shiyu Teng, Tingting Wu, Donghao Gao, Siyi Wu, Yaqian Xiao, Yan Long, Zhixiong Xie
    International Journal of Molecular Sciences.2023; 24(2): 1184.     CrossRef
  • Host-microbe interactions in chronic rhinosinusitis biofilms and models for investigation
    Emily J. Vanderpool, Kendra P. Rumbaugh
    Biofilm.2023; 6: 100160.     CrossRef
  • Mechanisms of iron homeostasis in Pseudomonas aeruginosa and emerging therapeutics directed to disrupt this vital process
    Ana Sánchez‐Jiménez, Francisco J. Marcos‐Torres, María A. Llamas
    Microbial Biotechnology.2023; 16(7): 1475.     CrossRef
  • Host cell responses against the pseudomonal biofilm: A continued tale of host-pathogen interactions
    Sathish Sankar, Pitchaipillai Sankar Ganesh, Suganya Subramaniam, Esaki M Shankar, Monal Yuwanati, Rajakumar Govindasamy, Muthu Thiruvengadam
    Microbial Pathogenesis.2023; 174: 105940.     CrossRef
  • Development of Gallium(III) as an Antimicrobial Drug Targeting Pathophysiologic Iron Metabolism of Human Pathogens
    Zachary W. Scott, Seoung-ryoung Choi, Bradley E. Britigan, Prabagaran Narayanasamy
    ACS Infectious Diseases.2023; 9(4): 716.     CrossRef
  • Functionalized Amphiphilic Block Copolymers and Complex Emulsions for Selective Sensing of Dissolved Metals at Liquid–Liquid Interfaces
    Tyler J. Durkin, Baishali Barua, Jamie J. Holmstrom, Vasiliki Karanikola, Suchol Savagatrup
    Langmuir.2023; 39(36): 12845.     CrossRef
  • Characterisation of Ferritin–Lymphocyte Ratio in COVID-19
    Alexander Liu, Robert Hammond, Kenneth Chan, Chukwugozie Chukwuenweniwe, Rebecca Johnson, Duaa Khair, Eleanor Duck, Oluwaseun Olubodun, Kristian Barwick, Winston Banya, James Stirrup, Peter D. Donnelly, Juan Carlos Kaski, Anthony R. M. Coates
    Biomedicines.2023; 11(10): 2819.     CrossRef
  • Pseudomonas aeruginosa responds to altered membrane phospholipid composition by adjusting the production of two-component systems, proteases and iron uptake proteins
    Muttalip Caliskan, Gereon Poschmann, Mirja Gudzuhn, Daniel Waldera-Lupa, Rebecka Molitor, Christoph Heinrich Strunk, Wolfgang R. Streit, Karl-Erich Jaeger, Kai Stühler, Filip Kovacic
    Biochimica et Biophysica Acta (BBA) - Molecular and Cell Biology of Lipids.2023; 1868(6): 159317.     CrossRef
  • Biofilm formation in xenobiotic-degrading microorganisms
    Pankaj Bhatt, Kalpana Bhatt, Yaohua Huang, Jiayi Li, Siyi Wu, Shaohua Chen
    Critical Reviews in Biotechnology.2023; 43(8): 1129.     CrossRef
  • Pathogenesis of the Pseudomonas aeruginosa Biofilm: A Review
    Felipe Francisco Tuon, Leticia Ramos Dantas, Paula Hansen Suss, Victoria Stadler Tasca Ribeiro
    Pathogens.2022; 11(3): 300.     CrossRef
  • Molecular Technology for the Detection of Pyoviridine Gene in Pseudomonas aeruginosa Isolated from Burn Cases
    Eman Nassir Hussan AL-Jesmany, Oruba Khalid Abbas, Basima QASIM Hasan AlSaadi
    Mustansiriya Medical Journal.2022; 21(1): 23.     CrossRef
  • Heme cross-feeding can augment Staphylococcus aureus and Enterococcus faecalis dual species biofilms
    Jun-Hong Ch’ng, Mugil Muthu, Kelvin K L Chong, Jun Jie Wong, Casandra A Z Tan, Zachary J S Koh, Daniel Lopez, Artur Matysik, Zeus J Nair, Timothy Barkham, Yulan Wang, Kimberly A Kline
    The ISME Journal.2022; 16(8): 2015.     CrossRef
  • Human lactoferrin from breast milk: characterization by HPLC and its in vitro antibiofilm performance
    Karina Jeanette Parra-Saavedra, Adriana Macaria Macias-Lamas, Jorge Manuel Silva-Jara, Josué Raymundo Solís-Pacheco, Pablo César Ortiz-Lazareno, Blanca Rosa Aguilar-Uscanga
    Journal of Food Science and Technology.2022; 59(12): 4907.     CrossRef
  • Elucidation of Iron(III) Bioleaching Properties of Gram-Positive Bacteria
    Hao Jing, Zhao Liu, Jun Chen, Chun Loong Ho
    ACS Omega.2022; 7(42): 37212.     CrossRef
  • Proteomic and Transcriptomic Analyses Indicate Reduced Biofilm-Forming Abilities in Cefiderocol-Resistant Klebsiella pneumoniae
    Jinfeng Bao, Lu Xie, Yating Ma, Ran An, Bing Gu, Chengbin Wang
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Zeolite-supported biofilms as inoculants for the treatment of MCPA-polluted soil and sand by bioaugmentation: A microcosm study
    Nataliia Gorodylova, Alain Seron, Karine Michel, Catherine Joulian, Fabian Delorme, Coralie Soulier, Sophie Bresch, Catherine Garreau, Fabien Giovannelli, Caroline Michel
    Applied Soil Ecology.2022; 180: 104614.     CrossRef
  • Bacterial Siderophores: Structure, Functions, and Role in the Pathogenesis of Infections
    D. A. Kuznetsova, V. A. Rykova, O. N. Podladchikova
    Problems of Particularly Dangerous Infections.2022; (3): 14.     CrossRef
  • Harnessing microbial iron chelators to develop innovative therapeutic agents
    Marta Ribeiro, Cátia A. Sousa, Manuel Simões
    Journal of Advanced Research.2022; 39: 89.     CrossRef
  • Understanding the Potential and Risk of Bacterial Siderophores in Cancer
    Valentina Pita-Grisanti, Kaylin Chasser, Trevor Sobol, Zobeida Cruz-Monserrate
    Frontiers in Oncology.2022;[Epub]     CrossRef
  • Overexpression of pdeR promotes biofilm formation of Paracoccus denitrificans by promoting ATP production and iron acquisition
    Na Wang, Jie Gao, Shujie Xiao, Guoqiang Zhuang
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Impact of Fe2+ and Shear Stress on the Development and Mesoscopic Structure of Biofilms—A Bacillus subtilis Case Study
    Luisa Gierl, Harald Horn, Michael Wagner
    Microorganisms.2022; 10(11): 2234.     CrossRef
  • Clinical Efficacy and In Vitro Drug Sensitivity Test Results of Azithromycin Combined With Other Antimicrobial Therapies in the Treatment of MDR P. aeruginosa Ventilator-Associated Pneumonia
    Yuqin Huang, Wenguo Wang, Qiang Huang, Zhengyan Wang, Zhuanzhuan Xu, Chaochao Tu, Dongli Wan, Miaobo He, Xiaoyi Yang, Huaqiang Xu, Hanqin Wang, Ying Zhao, Mingli Tu, Quan Zhou
    Frontiers in Pharmacology.2022;[Epub]     CrossRef
  • Advancement of Gallium and Gallium-Based Compounds as Antimicrobial Agents
    Fupeng Li, Fengxiang Liu, Kai Huang, Shengbing Yang
    Frontiers in Bioengineering and Biotechnology.2022;[Epub]     CrossRef
  • Genomic characterization of denitrifying methylotrophic Pseudomonas aeruginosa strain AAK/M5 isolated from municipal solid waste landfill soil
    Ashish Kumar Singh, Rakesh Kumar Gupta, Hemant J. Purohit, Anshuman Arun Khardenavis
    World Journal of Microbiology and Biotechnology.2022;[Epub]     CrossRef
  • Pyoverdine Inhibitors and Gallium Nitrate Synergistically Affect Pseudomonas aeruginosa
    Donghoon Kang, Alexey V. Revtovich, Alexander E. Deyanov, Natalia V. Kirienko, Patricia A. Bradford
    mSphere.2021;[Epub]     CrossRef
  • Pseudomonas aeruginosa: An Audacious Pathogen with an Adaptable Arsenal of Virulence Factors
    Irene Jurado-Martín, Maite Sainz-Mejías, Siobhán McClean
    International Journal of Molecular Sciences.2021; 22(6): 3128.     CrossRef
  • Role of Tris-CaEDTA as an adjuvant with nebulised tobramycin in cystic fibrosis patients with Pseudomonas aeruginosa lung infections: A randomised controlled trial
    Ramaa Puvvadi, Helga Mikkelsen, Lucy McCahon, Samantha Grogan, William Ditcham, David W. Reid, Iain Lamont, Stephen M. Stick, Barry Clements
    Journal of Cystic Fibrosis.2021; 20(2): 316.     CrossRef
  • Transcriptional profiling of Pseudomonas aeruginosa PAO1 in response to anti‐biofilm and anti‐infection agent exopolysaccharide EPS273
    Z. Wu, R. Zheng, J. Zhang, S. Wu
    Journal of Applied Microbiology.2021; 130(1): 265.     CrossRef
  • Wolf in Sheep’s Clothing: Clostridioides difficile Biofilm as a Reservoir for Recurrent Infections
    Jazmin Meza-Torres, Emile Auria, Bruno Dupuy, Yannick D. N. Tremblay
    Microorganisms.2021; 9(9): 1922.     CrossRef
  • Variability of the structure of winter microbial communities in Chelyabinsk lakes
    S. V. Andreeva, Y. Y. Filippova, E. V. Devyatova, D. Y. Nokhrin
    Biosystems Diversity.2021; 29(4): 311.     CrossRef
  • The cystic fibrosis lung microenvironment alters antibiotic activity: causes and effects
    Sara Van den Bossche, Emma De Broe, Tom Coenye, Eva Van Braeckel, Aurélie Crabbé
    European Respiratory Review.2021; 30(161): 210055.     CrossRef
  • Virulent and multidrug‐resistant Klebsiella pneumoniae from clinical samples in Balochistan
    Sareeen Fatima, Faiza Liaqat, Ali Akbar, Muhammad Sahfee, Abdul Samad, Muhammad Anwar, Shazia Iqbal, Shabir Ahmad Khan, Haleema Sadia, Gul Makai, Anila Bahadur, Wajeeha Naeem, Adnan Khan
    International Wound Journal.2021; 18(4): 510.     CrossRef
  • Cefiderocol Retains Antibiofilm Activity in Multidrug-Resistant Gram-Negative Pathogens
    Christine A. Pybus, Christina Felder-Scott, Victor Obuekwe, David E. Greenberg
    Antimicrobial Agents and Chemotherapy.2021;[Epub]     CrossRef
  • Let-7b-5p in vesicles secreted by human airway cells reduces biofilm formation and increases antibiotic sensitivity of P. aeruginosa
    Katja Koeppen, Amanda Nymon, Roxanna Barnaby, Laura Bashor, Zhongyou Li, Thomas H. Hampton, Amanda E. Liefeld, Fred W. Kolling, Ian S. LaCroix, Scott A. Gerber, Deborah A. Hogan, Swetha Kasetty, Carey D. Nadell, Bruce A. Stanton
    Proceedings of the National Academy of Sciences.2021;[Epub]     CrossRef
  • High-Throughput Approaches for the Identification of Pseudomonas aeruginosa Antivirulents
    Donghoon Kang, Liyang Zhang, Natalia V. Kirienko, Danielle A. Garsin
    mBio.2021;[Epub]     CrossRef
  • Antimicrobial activity of harzianic acid against Staphylococcus pseudintermedius
    Anna De Filippis, Francesca Paola Nocera, Simona Tafuri, Francesca Ciani, Alessia Staropoli, Ernesto Comite, Assunta Bottiglieri, Laura Gioia, Matteo Lorito, Sheridan Lois Woo, Francesco Vinale, Luisa De Martino
    Natural Product Research.2021; 35(23): 5440.     CrossRef
  • Ex situ model of biofilm‐associated wounds: providing a host‐like environment for the study of Staphylococcus aureus and Pseudomonas aeruginosa biofilms
    G.M.M. Guedes, A.S.P. Santos‐Filho, W.F.M. Regis, C.J. Ocadaque, B.R. Amando, J.J.C. Sidrim, R.S.N. Brilhante, R.A. Cordeiro, S.P. Bandeira, M.F.G. Rocha, D.S.C.M. Castelo‐Branco
    Journal of Applied Microbiology.2021; 131(3): 1487.     CrossRef
  • Iron Chelation in Local Infection
    Cassidy Scott, Gaurav Arora, Kayle Dickson, Christian Lehmann
    Molecules.2021; 26(1): 189.     CrossRef
  • The Adc regulon mediates zinc homeostasis in Streptococcus mutans
    Yangyang Pan, Yang Chen, Jiamin Chen, Qizhao Ma, Tao Gong, Shuxing Yu, Qiong Zhang, Jing Zou, Yuqing Li
    Molecular Oral Microbiology.2021; 36(5): 278.     CrossRef
  • Small Molecule Inhibitors of the Bacterioferritin (BfrB)–Ferredoxin (Bfd) Complex Kill Biofilm-Embedded Pseudomonas aeruginosa Cells
    Anabel Soldano, Huili Yao, Achala N. D. Punchi Hewage, Kevin Meraz, Joel K. Annor-Gyamfi, Richard A. Bunce, Kevin P. Battaile, Scott Lovell, Mario Rivera
    ACS Infectious Diseases.2021; 7(1): 123.     CrossRef
  • Recent Evidence for Multifactorial Biofilm Regulation by Heme Sensor Proteins NosP and H-NOX
    Jiayuan Fu, Steven Hall, Elizabeth M. Boon
    Chemistry Letters.2021; 50(5): 1095.     CrossRef
  • New Perspectives on Antimicrobial Agents: Cefiderocol
    Erin K. McCreary, Emily L. Heil, Pranita D. Tamma
    Antimicrobial Agents and Chemotherapy.2021;[Epub]     CrossRef
  • Design of Polymeric Thin Films to Direct Microbial Biofilm Growth, Virulence, and Metabolism
    Trevor Franklin, Yinan Wu, Jiayan Lang, Sijin Li, Rong Yang
    Biomacromolecules.2021; 22(12): 4933.     CrossRef
  • Aspergillus fumigatus biofilms: Toward understanding how growth as a multicellular network increases antifungal resistance and disease progression
    Kaesi A. Morelli, Joshua D. Kerkaert, Robert A. Cramer, Chaoyang Xue
    PLOS Pathogens.2021; 17(8): e1009794.     CrossRef
  • Variability of the structure of winter microbial communities in Chelyabinsk lakes
    S. V. Andreeva, Y. Y. Filippova, E. V. Devyatova, D. Y. Nokhrin
    Biosystems Diversity.2021; 29(4): 311.     CrossRef
  • Case Report: Successful Rescue Therapy of Extensively Drug-Resistant Acinetobacter baumannii Osteomyelitis With Cefiderocol
    Michael Dagher, Felicia Ruffin, Steven Marshall, Magdalena Taracila, Robert A Bonomo, Rachel Reilly, Vance G Fowler, Joshua T Thaden
    Open Forum Infectious Diseases.2020;[Epub]     CrossRef
  • Identification and validation of a novel anti-virulent that binds to pyoverdine and inhibits its function
    Xu Wang, Quinn Kleerekoper, Alexey V. Revtovich, Donghoon Kang, Natalia V. Kirienko
    Virulence.2020; 11(1): 1293.     CrossRef
  • Inhibiting Iron Mobilization from Bacterioferritin in Pseudomonas aeruginosa Impairs Biofilm Formation Irrespective of Environmental Iron Availability
    Anabel Soldano, Huili Yao, Josephine R. Chandler, Mario Rivera
    ACS Infectious Diseases.2020; 6(3): 447.     CrossRef
  • Mobilization of Iron Stored in Bacterioferritin Is Required for Metabolic Homeostasis in Pseudomonas aeruginosa
    Achala N. D. Punchi Hewage, Leo Fontenot, Jessie Guidry, Thomas Weldeghiorghis, Anil K. Mehta, Fabrizio Donnarumma, Mario Rivera
    Pathogens.2020; 9(12): 980.     CrossRef
  • Role of aspartate ammonia-lyase in Pasteurella multocida
    Zui Wang, Li Li, Peng Liu, Chen Wang, Qin Lu, Lina Liu, Xiaozhong Wang, Qingping Luo, Huabin Shao
    BMC Microbiology.2020;[Epub]     CrossRef
  • An In Vitro Cell Culture Model for Pyoverdine-Mediated Virulence
    Donghoon Kang, Natalia V. Kirienko
    Pathogens.2020; 10(1): 9.     CrossRef
  • Vertebrate mucus stimulates biofilm development and upregulates iron acquisition genes in Flavobacterium columnare
    Miles D. Lange, Bradley D. Farmer, Jason Abernathy
    Journal of Fish Diseases.2020; 43(1): 101.     CrossRef
  • Rhamnolipid Enhances Burkholderia Pseudomallei Biofilm Susceptibility, Disassembly and Production of Virulence Factors
    José JC Sidrim, Crister J Ocadaque, Bruno R Amando, Glaucia M de M Guedes, Cecília L Costa, Raimunda SN Brilhante, Rossana de A Cordeiro, Marcos FG Rocha, Débora SCM Castelo-Branco
    Future Microbiology.2020; 15(12): 1109.     CrossRef
  • An integrated model system to gain mechanistic insights into biofilm-associated antimicrobial resistance in Pseudomonas aeruginosa MPAO1
    Adithi R. Varadarajan, Raymond N. Allan, Jules D. P. Valentin, Olga E. Castañeda Ocampo, Vincent Somerville, Franziska Pietsch, Matthias T. Buhmann, Jonathan West, Paul J. Skipp, Henny C. van der Mei, Qun Ren, Frank Schreiber, Jeremy S. Webb, Christian H.
    npj Biofilms and Microbiomes.2020;[Epub]     CrossRef
  • Connecting iron acquisition and biofilm formation in the ESKAPE pathogens as a strategy for combatting antibiotic resistance
    Savannah J. Post, Justin A. Shapiro, William M. Wuest
    MedChemComm.2019; 10(4): 505.     CrossRef
  • Novel Pyoverdine Inhibitors Mitigate Pseudomonas aeruginosa Pathogenesis
    Daniel R. Kirienko, Donghoon Kang, Natalia V. Kirienko
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Bioaccumulation of potentially toxic elements by submerged plants and biofilms: A critical review
    Nan Geng, Yichao Wu, Ming Zhang, Daniel C.W. Tsang, Jörg Rinklebe, Yinfeng Xia, Debao Lu, Lifang Zhu, Kumuduni Niroshika Palansooriya, Ki-Hyun Kim, Yong Sik Ok
    Environment International.2019; 131: 105015.     CrossRef
  • Pyoverdine-Dependent Virulence of Pseudomonas aeruginosa Isolates From Cystic Fibrosis Patients
    Donghoon Kang, Alexey V. Revtovich, Qingquan Chen, Kush N. Shah, Carolyn L. Cannon, Natalia V. Kirienko
    Frontiers in Microbiology.2019;[Epub]     CrossRef
Research Support, Non-U.S. Gov'ts
Analyses of Bacterial Communities in Meju, a Korean Traditional Fermented Soybean Bricks, by Cultivation-Based and Pyrosequencing Methods
Yi-Seul Kim , Min-Cheol Kim , Soon-Wo Kwon , Soo-Jin Kim , In-Cheol Park , Jong-Ok Ka , Hang-Yeon Weon
J. Microbiol. 2011;49(3):340-348.   Published online June 30, 2011
DOI: https://doi.org/10.1007/s12275-011-0302-3
  • 217 View
  • 0 Download
  • 93 Crossref
AbstractAbstract PDF
Despite the importance of meju as a raw material used to make Korean soy sauce (ganjang) and soybean paste (doenjang), little is known about the bacterial diversity of Korean meju. In this study, the bacterial communities in meju were examined using both culture-dependent and independent methods in order to evaluate the diversity of the bacterial population. Analyses of the 16S rRNA gene sequences of the bacterial strains isolated from meju samples showed that the dominant species were related to members of the genera Bacillus, Enterococcus, and Pediococcus. The community DNAs extracted from nine different meju samples were analyzed by barcoded pyrosequencing method targeting of the V1 to V3 hypervariable regions of the 16S rRNA gene. In total, 132,374 sequences, with an average read length of 468 bp, were assigned to several phyla, with Firmicutes (93.6%) representing the predominant phylum, followed by Proteobacteria (4.5%) and Bacteroidetes (0.8%). Other phyla accounted for less than 1% of the total bacterial sequences. Most of the Firmicutes were Bacillus and lactic acid bacteria, mainly represented by members of the genera Enterococcus, Lactococcus, and Leuconostoc, whose ratio varied among different samples. In conclusion, this study indicated that the bacterial communities in meju were very diverse and a complex microbial consortium containing various microorganisms got involved in meju fermentation than we expected before.

Citations

Citations to this article as recorded by  
  • From probiotics to fermentation: A review of microbes in food and supplements
    Ijaz Usman Ali, Sibgha Tul Fatima, Hina Naz, Ahmad Waheed
    Bio Communications.2025; 1(3): 1.     CrossRef
  • Inhibitory Effects of Bacillus subtilis Isolated from Meju (Fermented Soybean Brick) on the Growth of Aspergillus parasiticus
    Jong-Gyu Kim, Jeong-Yeong Park
    Applied Microbiology.2024; 4(1): 354.     CrossRef
  • Growth in traditional fermented soybeans-related research (tempeh, natto, doenjang, chungkookjang, douchi, meju, kinema, oncom, and tauco) from 1928 to 2024, following the omics emergence and trend in functional food
    Andri Frediansyah
    Process Biochemistry.2024; 147: 600.     CrossRef
  • Fermentative metabolic features of doenjang-meju as revealed by genome-centered metatranscriptomics
    Dong Min Han, Ju Hye Baek, Dae Gyu Choi, Che Ok Jeon
    Food Chemistry: X.2024; 23: 101658.     CrossRef
  • Correlation between monosaccharide, oligosaccharide, and microbial community profile changes in traditional soybean brick (meju) fermentation
    HyunJi Lee, Eunhye Jo, JaeHui Song, Jugyeong Min, Younshil Song, Heeseob Lee, Youngshik Choe, Jaeho Cha, Hyeyoung Lee
    Food Research International.2024; 184: 114233.     CrossRef
  • Deficiency in Opu Systems Imparts Salt-Sensitivity to Weizmannia coagulans
    Tao Kim, Sojeong Heo, Jong-Hoon Lee, Do-Won Jeong
    Journal of Microbiology and Biotechnology.2024; 34(7): 1443.     CrossRef
  • Enhancing food safety in soybean fermentation through strategic implementation of starter cultures
    Xin Hui Chin, Hosam Elhalis, Yvonne Chow, Shao Quan Liu
    Heliyon.2024; 10(2): e25007.     CrossRef
  • Transcriptomic analysis of the metabolic characteristics of Aspergillus oryzae during the fermentation of doenjang-meju, a traditional Korean fermented soybean brick
    Dong Min Han, Ju Hye Baek, Dae Gyu Choi, Che Ok Jeon
    LWT.2024; 208: 116740.     CrossRef
  • Antioxidant Activities of Tempeh prepared with Black Soybeans
    Jin-Hee Choi
    Current Topic in Lactic Acid Bacteria and Probiotics.2024; 10(2): 98.     CrossRef
  • Microbial Consortium of Jeju Traditional Fermented Foods and Their Cosmetic Ingredient Potential
    Sung-Eun Bae, Sungmin Bae, Sung Jin Park, Pomjoo Lee, Chang-Gu Hyun
    Fermentation.2024; 10(7): 345.     CrossRef
  • Fermentative features of Bacillus velezensis and Leuconostoc mesenteroides in doenjang-meju, a Korean traditional fermented soybean brick
    Dong Min Han, Ju Hye Baek, Byung Hee Chun, Che Ok Jeon
    Food Microbiology.2023; 110: 104186.     CrossRef
  • Correlation between bacterial diversity and flavor substances in Longgang soy sauce
    Yongheng Yan, Min Zhang, Yingchao Zhang, Xuelin Zhang, Xingrong Zhang, Xiangying Zhao, Hui Xu, Yanhong Huang
    Bioscience, Biotechnology, and Biochemistry.2023; 87(5): 541.     CrossRef
  • Diversity and dynamics of microbial population during fermentation of gray sufu and their correlation with quality characteristics
    Siqi Ding, Meng Tian, Liu Yang, Yue Pan, Linglan Suo, Xianming Zhu, Dayong Ren, Hansong Yu
    LWT.2023; 180: 114711.     CrossRef
  • Plant-Based Alkaline Fermented Foods as Sustainable Sources of Nutrients and Health-Promoting Bioactive Compounds
    James Owusu-Kwarteng, Dominic Agyei, Fortune Akabanda, Richard Atinpoore Atuna, Francis Kweku Amagloh
    Frontiers in Sustainable Food Systems.2022;[Epub]     CrossRef
  • Bacterial communities in home-made Doushen with and without chili pepper
    Weibing Zhang, Wenjuan Gong, Zhongming Zhang, Qiaoqiao Luo, Yaping Li
    Food Research International.2022; 156: 111321.     CrossRef
  • Unraveling the core functional bacteria and their succession throughout three fermentation stages of broad bean paste with chili
    Songfeng Yu, Jia Song, Tao Hu, Jun Wang, Xiaojing Liu, Yu Zheng, Lei Shi, Shoupeng Wan, Min Wang
    Food Science and Human Wellness.2022; 11(4): 874.     CrossRef
  • Antibiotic susceptibility of Bacillus velezensis
    Ganghun Heo, Haram Kong, Namwon Kim, Sugyeong Lee, Sooyoung Sul, Do-Won Jeong, Jong-Hoon Lee
    FEMS Microbiology Letters.2022;[Epub]     CrossRef
  • Untargeted Metabolomics reveals Doenjang metabolites affected by manufacturing process and microorganisms
    Jang-Eun Lee, Jeong-Hyun Yun, Eunjung Lee, Sang Pil Hong
    Food Research International.2022; 157: 111422.     CrossRef
  • Dynamics and correlation of microbial communities and metabolic compounds in doenjang-meju, a Korean traditional soybean brick
    Hyung Min Kim, Dong Min Han, Ju Hye Baek, Byung Hee Chun, Che Ok Jeon
    Food Research International.2022; 155: 111085.     CrossRef
  • Technologically relevant Bacillus species and microbial safety of West African traditional alkaline fermented seed condiments
    James Owusu-Kwarteng, Charles Parkouda, Gbenga Adedeji Adewumi, Labia Irène Ivette Ouoba, Lene Jespersen
    Critical Reviews in Food Science and Nutrition.2022; 62(4): 871.     CrossRef
  • Community structure of yeast in fermented soy sauce and screening of functional yeast with potential to enhance the soy sauce flavor
    Jingwen Wang, Mouming Zhao, Nuoyi Xie, Mingtao Huang, Yunzi Feng
    International Journal of Food Microbiology.2022; 370: 109652.     CrossRef
  • Analysis of microbial community and the characterization of Aspergillus flavus in Liuyang Douchi during fermentation
    Yi Chen, Pao Li, Weiwei He, Luyan Liao, Bo Xia, Liwen Jiang, Yang Liu
    LWT.2022; 154: 112567.     CrossRef
  • Safety and Technological Characterization of Staphylococcus xylosus and Staphylococcus pseudoxylosus Isolates from Fermented Soybean Foods of Korea
    Haram Kong, Do-Won Jeong, Namwon Kim, Sugyeong Lee, Sooyoung Sul, Jong-Hoon Lee
    Journal of Microbiology and Biotechnology.2022; 32(4): 458.     CrossRef
  • Characteristics of Bacterial Strains with Desirable Flavor Compounds from Korean Traditional Fermented Soybean Paste (Doenjang)
    Sung-Hun Yi, Sang-Pil Hong
    Molecules.2021; 26(16): 5067.     CrossRef
  • Correlation of miRNAs With Prognosis in Composite Tissue Allotransplantation
    Mustafa Gökhan Ertosun, Özlenen Özkan, Esra Çelen, Ömer Özkan, Burçak Yoldaş
    Experimental and Clinical Transplantation.2021; 19(11): 1212.     CrossRef
  • “Food-Omics” Applications In The Food Metagenom Profiling
    Edyta Juszczuk-Kubiak, Monika Greguła-Kania, Barbara Sokołowska
    Postępy Mikrobiologii - Advancements of Microbiology.2021; 60(1): 59.     CrossRef
  • Chinese Traditional Fermented Soy Sauce Exerts Protective Effects against High-Fat and High-Salt Diet-Induced Hypertension in Sprague-Dawley Rats by Improving Adipogenesis and Renin-Angiotensin-Aldosterone System Activity
    Bao Zhong, Eun-Gyung Mun, Jin-Xi Wang, Youn-Soo Cha
    Fermentation.2021; 7(2): 52.     CrossRef
  • Genetic Background Behind the Amino Acid Profiles of Fermented Soybeans Produced by Four Bacillus spp.
    Mihyun Jang, Do-Won Jeong, Ganghun Heo, Haram Kong, Cheong-Tae Kim, Jong-Hoon Lee
    Journal of Microbiology and Biotechnology.2021; 31(3): 447.     CrossRef
  • Recent progress and advances in soy sauce production technologies: A review
    Soumaya Sassi, Wan Abd Al Qadr Imad Wan‐Mohtar, Nazzatush Shimar Jamaludin, Zul Ilham
    Journal of Food Processing and Preservation.2021;[Epub]     CrossRef
  • Fermented Soy Products: Beneficial Potential in Neurodegenerative Diseases
    Chan Ho Jang, Jisun Oh, Ji Sun Lim, Hyo Jung Kim, Jong-Sang Kim
    Foods.2021; 10(3): 636.     CrossRef
  • Physico-Chemical Properties of Korean Soybean (Glycine max L.) and Tempeh by Rhizopus sp. from Soybean Cultivars
    Hana Song, Min-Jung Seo, Hong-Sig Kim, Hye Sun Choi, Jiyoung Park, Eun-Yeong Sim, Hye Young Park
    Journal of the East Asian Society of Dietary Life.2021; 31(5): 281.     CrossRef
  • High-throughput sequencing of the microbial community associated with the physicochemical properties of meju (dried fermented soybean) and doenjang (traditional Korean fermented soybean paste)
    Jung-A Ryu, Eiseul Kim, Seung-Min Yang, Shinyoung Lee, Sung-Ran Yoon, Kil-Su Jang, Hae-Yeong Kim
    LWT.2021; 146: 111473.     CrossRef
  • Culture-dependent and -independent investigations of bacterial migration into doenjang from its components meju and solar salt
    Jung-Min Lee, Sojeong Heo, Yoon-Su Kim, Jong-Hoon Lee, Do-Won Jeong, Young Hoon Jung
    PLOS ONE.2020; 15(10): e0239971.     CrossRef
  • Natural Occurrence of Aflatoxigenic Aspergillus Species and Aflatoxins in Traditional Korean Fermentation Starters, Meju and Nuruk
    So Young Woo, Sang Yoo Lee, Fei Tian, A-Yeong Jeong, Cha Nee Yoo, Seung Yoon Kang, Hyang Sook Chun
    Journal of Food Hygiene and Safety.2020; 35(5): 438.     CrossRef
  • Analysis and control of microbial gas production in fermented chili paste
    Yu Zheng, Ju Chen, Lin Chen, Tao Hu, Lei Shi, Shoupeng Wan, Min Wang
    Journal of Food Processing and Preservation.2020;[Epub]     CrossRef
  • Evaluation of bacterial and fungal communities during the fermentation of Baixi sufu, a traditional spicy fermented bean curd
    Hongfang Wan, Ting Liu, Caiwei Su, Xu Ji, Liping Wang, Yong Zhao, Zhengquan Wang
    Journal of the Science of Food and Agriculture.2020; 100(4): 1448.     CrossRef
  • Metabolite Profiling and Microbial Community of Traditional Meju Show Primary and Secondary Metabolite Differences Correlated with Antioxidant Activities
    Da Hye Song, Byung Hee Chun, Sunmin Lee, Chagam Koteswara Reddy, Che Ok Jeon, Choong Hwan Lee
    Journal of Microbiology and Biotechnology.2020; 30(11): 1697.     CrossRef
  • Effects of Doenjang, a Traditional Korean Soybean Paste, with High-Salt Diet on Blood Pressure in Sprague–Dawley Rats
    Eun-Gyung Mun, Jung Eun Park, Youn-Soo Cha
    Nutrients.2019; 11(11): 2745.     CrossRef
  • Unraveling the Contribution of High Temperature Stage to Jiang-Flavor Daqu, a Liquor Starter for Production of Chinese Jiang-Flavor Baijiu, With Special Reference to Metatranscriptomics
    Zhuolin Yi, Yanling Jin, Yao Xiao, Lanchai Chen, Li Tan, Anping Du, Kaize He, Dayu Liu, Huibo Luo, Yang Fang, Hai Zhao
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Analyses of microbial community of naturally homemade soybean pastes in Liaoning Province of China by Illumina Miseq Sequencing
    Xiaodong Sun, Guozhong Lyu, Yushi Luan, Zhihui Zhao, Hong Yang, Dan Su
    Food Research International.2018; 111: 50.     CrossRef
  • Correlating physiochemical quality characteristics to consumer hedonic perception of traditional Doenjang (fermented soybean paste) in Korea
    Mina K. Kim, Hyun‐Jung Chung, Woo‐Suk Bang
    Journal of Sensory Studies.2018;[Epub]     CrossRef
  • Development of Safe and Flavor‐Rich Doenjang (Korean Fermented Soybean Paste) Using Autochthonous Mixed Starters at the Pilot Plant Scale
    Eun Jin Lee, Jiye Hyun, Yong‐Ho Choi, Byung‐Serk Hurh, Sang‐Ho Choi, Inhyung Lee
    Journal of Food Science.2018; 83(6): 1723.     CrossRef
  • Effects of the predominant bacteria from meju and doenjang on the production of volatile compounds during soybean fermentation
    Do-Won Jeong, Sojeong Heo, Bitnara Lee, Hyundong Lee, Keuncheol Jeong, Jae-Young Her, Kwang-Geun Lee, Jong-Hoon Lee
    International Journal of Food Microbiology.2017; 262: 8.     CrossRef
  • Mystery behind Chinese liquor fermentation
    Guangyuan Jin, Yang Zhu, Yan Xu
    Trends in Food Science & Technology.2017; 63: 18.     CrossRef
  • Complete Genome Sequence of Bacillus paralicheniformis 14DA11, Exhibiting Resistance to Clindamycin and Erythromycin
    Jong-Hoon Lee, Do-Won Jeong
    Genome Announcements.2017;[Epub]     CrossRef
  • Next‐Generation Sequencing Analyses of Bacterial Community Structures in Soybean Pastes Produced in Northeast China
    Mi‐Hwa Lee, Fan‐Zhu Li, Jiyeon Lee, Jisu Kang, Seong‐Il Lim, Young‐Do Nam
    Journal of Food Science.2017; 82(4): 960.     CrossRef
  • Dynamics of microbial community during the extremely long‐term fermentation process of a traditional soy sauce
    Yang Yang, Yue Deng, Yulan Jin, Yanxi Liu, Baixue Xia, Qun Sun
    Journal of the Science of Food and Agriculture.2017; 97(10): 3220.     CrossRef
  • Making soy sauce using direct fermentation of defatted soybean meal without the meju (soybean Koji) preparation process
    Young Chan Park, Doo Hyun Park
    Food Science and Biotechnology.2016; 25(3): 777.     CrossRef
  • Potentiality of Bacillus amyloliquefaciens KFCC11574P isolated from Korean traditional doenjang as a starter in the production of functional soya bean paste
    Yeun Hong, Hyun‐Ji Jung, Seon‐Kyeong Han, Hae‐Yeong Kim
    International Journal of Food Science & Technology.2016; 51(1): 105.     CrossRef
  • Exploration of flavor familiarity effect in Korean and US consumers’ hot sauces perceptions
    Soh Min Lee, Soo-Eon Kim, Jean-Xavier Guinard, Kwang-Ok Kim
    Food Science and Biotechnology.2016; 25(3): 745.     CrossRef
  • DNA metabarcoding of microbial communities for healthcare
    I. Ye. Zaets, O. V. Podolich, O. N. Reva, N. O. Kozyrovska
    Biopolymers and Cell.2016; 32(1): 3.     CrossRef
  • Microbial communities related to sensory attributes in Korean fermented soy bean paste ( doenjang )
    Min Jung Kim, Han Sub Kwak, Hee Yeon Jung, Sang Sook Kim
    Food Research International.2016; 89: 724.     CrossRef
  • A new perspective on microbial landscapes within food production
    Nicholas A Bokulich, Zachery T Lewis, Kyria Boundy-Mills, David A Mills
    Current Opinion in Biotechnology.2016; 37: 182.     CrossRef
  • Repeated Batch-Fed Bioevaporation of Food Waste Using Biofilm-Developed Sponge
    Benqin Yang, Deokjin Jahng
    Drying Technology.2016; 34(1): 76.     CrossRef
  • The bacterial community structure of yond bap, a traditional fermented goat milk product, from distinct Chinese regions
    Xiao-Feng Liu, Chen-Jian Liu, Hai-Yan Zhang, Fu-Ming Gong, Yi-Yong Luo, Xiao-Ran Li
    Dairy Science & Technology.2015; 95(3): 369.     CrossRef
  • A Bacterial Strain Identified as Bacillus licheniformis using Vitek 2 Effectively Reduced NH3 Emission from Swine Manure
    Joung-Soo Lim, Deug-Woo Han, Sang-Ryong Lee, Ok-Hwa Hwang, Jung-Hoon Kwag, Sung-Back Cho
    Journal of Animal Environmental Science.2015; 21(3): 83.     CrossRef
  • Chromohalobacter is a Causing Agent for the Production of Organic Acids and Putrescine during Fermentation of Ganjang, a Korean Traditional Soy Sauce
    Ji Young Jung, Byung Hee Chun, Che Ok Jeon
    Journal of Food Science.2015;[Epub]     CrossRef
  • Emerging DNA-based technologies to characterize food ecosystems
    Andrea Galimberti, Antonia Bruno, Valerio Mezzasalma, Fabrizio De Mattia, Ilaria Bruni, Massimo Labra
    Food Research International.2015; 69: 424.     CrossRef
  • Isolation of indigenous Lactobacillus plantarum for malolactic fermentation
    Jun Heo, Chan-Mi Lee, Moon Kook Park, Do-Youn Jeong, Tai-Boong Uhm
    The Korean Journal of Microbiology.2015; 51(2): 169.     CrossRef
  • Metagenomic insights into the dynamics of microbial communities in food
    Gilles Kergourlay, Bernard Taminiau, Georges Daube, Marie-Christine Champomier Vergès
    International Journal of Food Microbiology.2015; 213: 31.     CrossRef
  • Diversity and community analysis of fermenting bacteria isolated from eight major Korean fermented foods using arbitrary-primed PCR and 16S rRNA gene sequencing
    Se-Hui Lee, Min-Ju Ahn, Ji-Sang Hong, Ju-Hoon Lee
    Journal of the Korean Society for Applied Biological Chemistry.2015; 58(3): 453.     CrossRef
  • Making soy sauce from defatted soybean meal without the mejus process by submerged cultivation using thermophilic bacteria
    Jeong Min Hur, Doo Hyun Park
    Journal of Food Science and Technology.2015; 52(8): 5030.     CrossRef
  • Characterization of activity and microbial diversity of typical types of Daqu for traditional Chinese vinegar
    Pan Li, Francis Worlanyo Kwami Aflakpui, Hang Yu, Lixin Luo, Wei-Tie Lin
    Annals of Microbiology.2015; 65(4): 2019.     CrossRef
  • Analysis of Bacterial Diversity During Acetic Acid Fermentation of Tianjin Duliu Aged Vinegar by 454 Pyrosequencing
    Qian Peng, Yanping Yang, Yanyun Guo, Ye Han
    Current Microbiology.2015; 71(2): 195.     CrossRef
  • Metabarcoding of the kombucha microbial community grown in different microenvironments
    Oleg N Reva, Iryna E Zaets, Leonid P Ovcharenko, Olga E Kukharenko, Switlana P Shpylova, Olga V Podolich, Jean-Pierre de Vera, Natalia O Kozyrovska
    AMB Express.2015;[Epub]     CrossRef
  • Genetic diversity and antibiotic resistance of Staphylococcus saprophyticus isolates from fermented foods and clinical samples
    Bitnara Lee, Do-Won Jeong, Jong-Hoon Lee
    Journal of the Korean Society for Applied Biological Chemistry.2015; 58(5): 659.     CrossRef
  • Microbiota analysis on fermented foods using next generation sequencer
    Hiroshi Ono, Jiro Nakayama
    Japanese Journal of Lactic Acid Bacteria.2014; 25(1): 3.     CrossRef
  • High-throughput sequencing of microbial communities in Poro cheese, an artisanal Mexican cheese
    Alejandro Aldrete-Tapia, Meyli C. Escobar-Ramírez, Mark L. Tamplin, Montserrat Hernández-Iturriaga
    Food Microbiology.2014; 44: 136.     CrossRef
  • Microbial succession and the functional potential during the fermentation of Chinese soy sauce brine
    Joanita Sulaiman, Han Ming Gan, Wai-Fong Yin, Kok-Gan Chan
    Frontiers in Microbiology.2014;[Epub]     CrossRef
  • Effect of incubation temperature on variations in bacterial communities grown in fermenting meju and the nutritional quality of soy sauce
    Doo Hyun Park
    Food Science and Biotechnology.2014; 23(6): 1921.     CrossRef
  • BOX-PCR and PCR-DGGE analysis for bacterial diversity of a naturally fermented functional food (Enzyme®)
    Linjiang Zhu, Hongtao Xu, Yanping Zhang, Guoliang Fu, Paul Q. Wu, Yin Li
    Food Bioscience.2014; 5: 115.     CrossRef
  • Characterization and use of microbial communities in Doenjang to control the unpleasant odor of Ginkgo epicarp
    Sunhyun Park, Kyung-Mo Song, Hyo-Jin Kim, Bong-Soo Kim, Young Kyung Rhee, Myung-Ki Lee
    Food Science and Biotechnology.2014; 23(6): 1959.     CrossRef
  • Microbial community dynamics during fermentation of doenjang-meju, traditional Korean fermented soybean
    Ji Young Jung, Se Hee Lee, Che Ok Jeon
    International Journal of Food Microbiology.2014; 185: 112.     CrossRef
  • Characterization of Bacillus licheniformis SCK A08 with Antagonistic Property Against Bacillus cereus and Degrading Capacity of Biogenic Amines
    Eon Sil Lee, Yong Sang Kim, Myeong Seon Ryu, Do Yeon Jeong, Tai Boong Uhm, Sung Ho Cho
    Journal of Food Hygiene and Safety.2014; 29(1): 40.     CrossRef
  • Analyzing the relation between the microbial diversity of DaQu and the turbidity spoilage of traditional Chinese vinegar
    Pan Li, Sha Li, Lili Cheng, Lixin Luo
    Applied Microbiology and Biotechnology.2014; 98(13): 6073.     CrossRef
  • Microbial Population Analysis of the Salivary Glands of Ticks; A Possible Strategy for the Surveillance of Bacterial Pathogens
    Yongjin Qiu, Ryo Nakao, Aiko Ohnuma, Fumihiko Kawamori, Chihiro Sugimoto, Leonard S. van Overbeek
    PLoS ONE.2014; 9(8): e103961.     CrossRef
  • Characterization of Biogenic Amine-reducing Pediococcus pentosaceus Isolated from Traditionally Fermented Soybean Products
    HyeonHwa Oh, MyeongSeon Ryu, Jun Heo, SaeBom Jeon, Young Sang Kim, DoYoun Jeong, Tai-Boong Uhm
    The Korean Journal of Microbiology.2014; 50(4): 319.     CrossRef
  • Exploring microbial succession and diversity during solid-state fermentation of Tianjin duliu mature vinegar
    Zhiqiang Nie, Yu Zheng, Min Wang, Yue Han, Yuenan Wang, Jianmei Luo, Dandan Niu
    Bioresource Technology.2013; 148: 325.     CrossRef
  • Effects of red pepper powder on microbial communities and metabolites during kimchi fermentation
    Sang Hyeon Jeong, Hyo Jung Lee, Ji Young Jung, Se Hee Lee, Hye-Young Seo, Wan-Soo Park, Che Ok Jeon
    International Journal of Food Microbiology.2013; 160(3): 252.     CrossRef
  • Pyrosequencing Analysis of Microbiota inKaburazushi, a Traditional Medieval Sushi in Japan
    Takashi KOYANAGI, Akira NAKAGAWA, Masashi KIYOHARA, Hiroshi MATSUI, Keiko YAMAMOTO, Florin BARLA, Harumi TAKE, Yoko KATSUYAMA, Atsushi TSUJI, Masahisa SHIJIMAYA, Shizuo NAKAMURA, Hiromichi MINAMI, Toshiki ENOMOTO, Takane KATAYAMA, Hidehiko KUMAGAI
    Bioscience, Biotechnology, and Biochemistry.2013; 77(10): 2125.     CrossRef
  • Analyses of archaeal communities in Doenjang and Ganjang using a culture-independent manner based on 16S rRNA sequences
    Min Keun Kim, Weon Taek Seo, Yong Bok Lee, Kye Man Cho
    Food Science and Biotechnology.2013; 22(2): 449.     CrossRef
  • Microbial succession and metabolite changes during fermentation of saeu-jeot: Traditional Korean salted seafood
    Ji Young Jung, Se Hee Lee, Hyo Jung Lee, Che Ok Jeon
    Food Microbiology.2013; 34(2): 360.     CrossRef
  • High-Throughput Sequencing and Metagenomics: Moving Forward in the Culture-Independent Analysis of Food Microbial Ecology
    Danilo Ercolini
    Applied and Environmental Microbiology.2013; 79(10): 3148.     CrossRef
  • Microbial succession and metabolite changes during fermentation of dongchimi, traditional Korean watery kimchi
    Sang Hyeon Jeong, Ji Young Jung, Se Hee Lee, Hyun Mi Jin, Che Ok Jeon
    International Journal of Food Microbiology.2013; 164(1): 46.     CrossRef
  • Isolation and Identification of Bacillus Strains with Antagonistic Properties against Film-forming Yeasts Overgrown in Low Salted Soybean Pastes
    SaeBom Jeon, MyeongSeon Ryu, Yong Sang Kim, Seung Wha Jo, Do Yeon Jeong, Tai-Boong Uhm
    The Korean Journal of Microbiology.2013; 49(3): 286.     CrossRef
  • Next-generation sequencing and its potential impact on food microbial genomics
    Lisa Solieri, Tikam Chand Dakal, Paolo Giudici
    Annals of Microbiology.2013; 63(1): 21.     CrossRef
  • Antimicrobial and Biogenic Amine-Degrading Activity of Bacillus licheniformis SCK B11 Isolated from Traditionally Fermented Red Pepper Paste
    Yong-Sang Kim, Jin-Oh Jeong, Sung-Ho Cho, Do-Yeon Jeong, Tai-Boong Uhm
    The Korean Journal of Microbiology.2012; 48(2): 163.     CrossRef
  • Novel High-Rank Phylogenetic Lineages within a Sulfur Spring (Zodletone Spring, Oklahoma), Revealed Using a Combined Pyrosequencing-Sanger Approach
    Noha Youssef, Brandi L. Steidley, Mostafa S. Elshahed
    Applied and Environmental Microbiology.2012; 78(8): 2677.     CrossRef
  • Visceral fat and body weight are reduced in overweight adults by the supplementation ofDoenjang, a fermented soybean paste
    Youn-Soo Cha, Ji-Ae Yang, Hyang-Im Back, Soo-Ran Kim, Min-Gul Kim, Su-Jin Jung, Won O Song, Soo-Wan Chae
    Nutrition Research and Practice.2012; 6(6): 520.     CrossRef
  • Next-generation approaches to the microbial ecology of food fermentations
    Nicholas A. Bokulich, David A. Mills
    BMB Reports.2012; 45(7): 377.     CrossRef
  • Microbial community analysis of Korean soybean pastes by next-generation sequencing
    Young-Do Nam, So-Young Lee, Seong-Il Lim
    International Journal of Food Microbiology.2012; 155(1-2): 36.     CrossRef
  • Microbial Composition of the Korean Traditional Food “kochujang” Analyzed by a Massive Sequencing Technique
    Young‐Do Nam, So‐lim Park, Seong‐Il Lim
    Journal of Food Science.2012;[Epub]     CrossRef
  • Screening of Strains with fibrinolytic activity and angiotensin-converting enzyme inhibitory activity from doenjang
    Tae-Woon Kim, Young-Hoon Kim, Hyun-Ji Jung, Cheon-Seok Park, Hae-Yeong Kim
    Food Science and Biotechnology.2012; 21(2): 581.     CrossRef
A Survey of the Geographic Distribution of Ophiocordyceps sinensis
Yi Li , Xiao-Liang Wang , Lei Jiao , Yi Jiang , Hui Li , Si-Ping Jiang , Ngarong Lhosumtseiring , Shen-Zhan Fu , Cai-Hong Dong , Yu Zhan , Yi-Jian Yao
J. Microbiol. 2011;49(6):913-919.   Published online December 28, 2011
DOI: https://doi.org/10.1007/s12275-011-1193-z
  • 421 View
  • 0 Download
  • 92 Crossref
AbstractAbstract PDF
Ophiocordyceps sinensis is one of the best known fungi in Traditional Chinese Medicine. Many efforts have been devoted to locating the production areas of this species resulting in various reports; however, its geographic distribution remains incompletely understood. Distribution of O. sinensis at the county level is clarified in this work based on both a literature search and fieldwork. More than 3600 publications related to O. sinensis were investigated, including scientific papers, books, and online information. Herbarium specimens of O. sinensis and field collections made by this research group during the years 2000-2010 were examined to verify the distribution sites. A total of 203 localities for O. sinensis have been found, of which 106 are considered as confirmed distribution sites, 65 as possible distribution sites, 29 as excluded distribution sites and three as suspicious distribution sites. The results show that O. sinensis is confined to the Tibetan Plateau and its surrounding regions, including Tibet, Gansu, Qinghai, Sichuan, and Yunnan provinces in China and in certain areas of the southern flank of the Himalayas, in the countries of Bhutan, India and Nepal, with 3,000 m as the lowest altitude for the distribution. The fungus is distributed from the southernmost site in Yulong Naxi Autonomous County in northwestern Yunnan Province to the northernmost site in the Qilian Mountains in Qilian County, Qinghai Province, and from the east edge of the Tibetan Plateau in Wudu County, Gansu Province to the westernmost site in Uttarakhand, India. The clarification of the geographic distribution of O. sinensis will lay the foundation for conservation and sustainable use of the species.

Citations

Citations to this article as recorded by  
  • Sustainable cultivation of phytopharmaceuticals in Baden-Wuerttemberg, Germany: a SWOT analysis and future directions
    Peter W. Heger, Ilka Meinert, Peter Nick, Peter Riedl, Michael Heinrich, Michael Straub
    Pharmaceutical Biology.2025; 63(1): 82.     CrossRef
  • Integrating 2D NMR-based metabolomics and in vitro assays to explore the potential viability of cultivated Ophiocordyceps sinensis as an alternative to the wild counterpart
    Xiu Gu, Yanping Li, Yang Li, Xiaohui Duan, Youfan Hu, Jialuo Chen, Huan Du, Jing Bai, Chengyan He, Caihong Bai, Jinlin Guo, Jiahui Yang, Kaifeng Hu
    Journal of Pharmaceutical and Biomedical Analysis.2025; 253: 116551.     CrossRef
  • Ethnopharmacology and current conservational status of Cordyceps sinensis
    Payas Arora, Nikita Bahuguna, Jigisha Anand, Prabhakar Semwal, Nishant Rai
    Zeitschrift für Naturforschung C.2025; 80(7-8): 297.     CrossRef
  • Conservation of Endangered Cordyceps sinensis Through Artificial Cultivation Strategies of C. militaris, an Alternate
    Kondapalli Vamsi Krishna, Balamuralikrishnan Balasubramanian, Sungkwon Park, Sukanta Bhattacharya, Joseph Kadanthottu Sebastian, Wen-Chao Liu, Manikantan Pappuswamy, Arun Meyyazhagan, Hesam Kamyab, Shreeshivadasan Chelliapan, Alok Malaviya
    Molecular Biotechnology.2025; 67(4): 1382.     CrossRef
  • Comparative Metabolite Profiling Between Cordyceps sinensis and Other Cordyceps by Untargeted UHPLC-MS/MS
    Jing Ma, Zhenjiang Chen, Kamran Malik, Chunjie Li
    Biology.2025; 14(2): 118.     CrossRef
  • Integrating divergent stakeholder perspectives for sustainable management of high-altitude ecosystems: insights from cordyceps harvesting in the Himalayas
    Suraj Upadhaya, Beeju Poudyal, Chantal Tumpach
    Sustainability Science.2025; 20(1): 207.     CrossRef
  • Climate change scenarios predict reduction in suitable habitats and range shifts for Ophiocordyceps sinensis (Berk.) in Hindu Kush Himalaya
    Nadeem Salam, Harvinder Kaur Sidhu, Shaheeda Shaban, Zafar A. Reshi, Manzoor A. Shah
    Journal of Asia-Pacific Biodiversity.2025; 18(1): 144.     CrossRef
  • An attempt of DNA barcodes based geographical origin authentication of the Chinese caterpillar fungus, Ophiocordyceps sinensis
    Yi Li, Jiao-Jiao Lu, Ya-Bin An, Lan Jiang, Hai-Jun Wu, Ke Wang, Dorji Phurbu, Jinmei Luobu, Chao Ma, Rui-Heng Yang, Cai-Hong Dong, Yi-Jian Yao
    IMA Fungus.2025;[Epub]     CrossRef
  • Two Mycopolysaccharides from Hirsutella sinensis mycelia: Structural characterization and dual antioxidant-cardioprotective functions
    Man Zhao, Zhenhao Jiang, Yingying Yang, Shenghao Wu, Qiqi Zhan, Junping Zhou, Zhiqiang Liu, Yuguo Zheng
    International Journal of Biological Macromolecules.2025; 318: 145224.     CrossRef
  • The interplay between the formation of Chinese cordyceps and the characteristics of soil properties and microbial network
    Qinghe Wang, Yapei Wang, Ting Li, Xiuwen Bao, Liying He, Lin Liu, Sijing Liu, Jing Bai, Han Zhang, Shuqi Niu, Jinlin Guo, Zhongxiong Lai
    Microbiology Spectrum.2025;[Epub]     CrossRef
  • Wild Cordyceps sinensis exhibits far lower arsenic accumulation and hepatorenal in mice compared to equivalent dose of inorganic arsenic
    Liang Gao, Hongxia Yang, Jinmei Ma, Hongtao Bi, Yuancan Xiao, Cen Li, Lixin Wei
    Frontiers in Pharmacology.2025;[Epub]     CrossRef
  • Composition, biosynthesis and pharmacological activities of chemical constituents of Ophiocordyceps sinensis: a review
    Wenting Wang, Bohan Cheng, Haotian Wu, Yuhua Shi, Lan Wu, Qinggang Yin, Mengyue Wang, Yuanzhu Liu, Ling Yuan, Ranran Gao, Li Xiang
    Medicinal Plant Biology.2025;[Epub]     CrossRef
  • Climate change-driven threats to Taxus L. survival and strategies for sustainable Taxol resource management
    Shuo Zhang, Yajie Zhou, Sihao Yuan, Biying Liu, Ting Zhou, Shaolin Peng
    Industrial Crops and Products.2025; 235: 121725.     CrossRef
  • Metabolomic analysis of cultivated Ophiocordyceps fungi from the Gaoligong Mountains
    Wanying Pi, Zihong Chen, Qinfeng Guo, Min Li, Ziliang Zhao, Yifei Zhang, Yinbo Wang, Shiqiang Yu, Ling Xu, Hongbo Hou, Zhilong Xiu, Yuesheng Dong
    Microchemical Journal.2025; 217: 115095.     CrossRef
  • Molecular phylogenetics of the Ophiocordyceps sinensis-species complex lineage (Ascomycota, Hypocreales), with the discovery of new species and predictions of species distribution
    Yongdong Dai, Siqi Chen, Yuanbing Wang, Yao Wang, Zhuliang Yang, Hong Yu
    IMA Fungus.2024;[Epub]     CrossRef
  • Cordyceps: Alleviating ischemic cardiovascular and cerebrovascular injury - A comprehensive review
    Yong Li, Liying He, Haoran Song, Xiuwen Bao, Shuqi Niu, Jing Bai, Junhao Ma, Run Yuan, Sijing Liu, Jinlin Guo
    Journal of Ethnopharmacology.2024; 332: 118321.     CrossRef
  • Effects of Drying Methods on Morphological Characteristics, Metabolite Content, and Antioxidant Capacity of Cordyceps sinensis
    Mengjun Xiao, Tao Wang, Chuyu Tang, Min He, Yuling Li, Xiuzhang Li
    Foods.2024; 13(11): 1639.     CrossRef
  • Quality Evaluation, health risk Assessment, and geographic origin tracing of Ophiocordyceps sinensis through mineral element analysis
    Fen Wang, Junfeng Fan, Yabin An, Guoliang Meng, Bingyu Ji, Yi Li, Caihong Dong
    Microchemical Journal.2024; 201: 110512.     CrossRef
  • Tracing the geographical origin of endangered fungus Ophiocordyceps sinensis, especially from Nagqu, using UPLC-Q-TOF-MS
    Fen Wang, Junfeng Fan, Yabin An, Guoliang Meng, Bingyu Ji, Yi Li, Caihong Dong
    Food Chemistry.2024; 440: 138247.     CrossRef
  • Knockdown of Thitarodes host genes influences dimorphic transition of Ophiocordyceps sinensis in the host hemolymph
    Tanqi Sun, Yongling Jin, Zhongchen Rao, Wang Liyan, Rui Tang, Khalid Muhammad Zaryab, Mingyan Li, Zhenhao Li, Ying Wang, Jing Xu, Richou Han, Li Cao
    Frontiers in Cellular and Infection Microbiology.2024;[Epub]     CrossRef
  • Nutritional Profile Changes in an Insect–Fungus Complex of Antheraea pernyi Pupa Infected by Samsoniella hepiali
    Shengchao Wang, Yun Meng, Dun Wang
    Foods.2023; 12(14): 2796.     CrossRef
  • Systematic analyses with genomic and metabolomic insights reveal a new species, Ophiocordyceps indica sp. nov. from treeline area of Indian Western Himalayan region
    Aakriti Sharma, Ekjot Kaur, Robin Joshi, Pooja Kumari, Abhishek Khatri, Mohit Kumar Swarnkar, Dinesh Kumar, Vishal Acharya, Gireesh Nadda
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Traceability Evaluation of Wild and Cultivated Cordyceps sinensis by Elemental Analysis and GasBench II Coupled to Stable Isotope Ratio Mass Spectrometry
    Bo Ding, Yiwen Tao, Jianjun Xie, Guangfeng Zeng, Hongbo Huang
    Food Analytical Methods.2023; 16(3): 515.     CrossRef
  • Fractional extraction and structural characterization of glycogen particles from the whole cultivated caterpillar fungus Ophiocordyceps sinensis
    Qing-Hua Liu, Yu-Dong Zhang, Zhang-Wen Ma, Zheng-Ming Qian, Zhi-Hong Jiang, Wei Zhang, Liang Wang
    International Journal of Biological Macromolecules.2023; 229: 507.     CrossRef
  • Systematic review of fungi, their diversity and role in ecosystem services from the Far Eastern Himalayan Landscape (FHL)
    Wei Fang, Shiva Devkota, Karuppusamy Arunachalam, Khin Min Min Phyo, Bandana Shakya
    Heliyon.2023; 9(1): e12756.     CrossRef
  • Potential bioactivities via anticancer, antioxidant, and immunomodulatory properties of cultured mycelial enriched β-D-glucan polysaccharides from a novel fungus Ophiocordyceps sinensis OS8
    Suwannachom Chatnarin, Mongkol Thirabunyanon
    Frontiers in Immunology.2023;[Epub]     CrossRef
  • Integrated metabolomics and transcriptomics reveal metabolites difference between wild and cultivated Ophiocordyceps sinensis
    Jianshuang Zhang, Na Wang, Wanxuan Chen, Weiping Zhang, Haoshen Zhang, Hao Yu, Yin Yi
    Food Research International.2023; 163: 112275.     CrossRef
  • Uncovering caterpillar fungus (Ophiocordyceps sinensis) consumption patterns and linking them to conservation interventions
    Jun He, Carsten Smith‐Hall, Wen Zhou, Weijia Zhou, Yunshang Wang, Ben Fan
    Conservation Science and Practice.2022;[Epub]     CrossRef
  • Understanding the sustainability of Chinese caterpillar fungus harvesting: the need for better data
    Carsten Smith-Hall, Rune B. Bennike
    Biodiversity and Conservation.2022; 31(2): 729.     CrossRef
  • Medium optimization for high mycelial soluble protein content of Ophiocordyceps sinensis using response surface methodology
    Chu-Yu Tang, Jie Wang, Xin Liu, Jian-Bo Chen, Jing Liang, Tao Wang, Wayne Roydon Simpson, Yu-Ling Li, Xiu-Zhang Li
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Lipidomic profiling of wild cordyceps and its substituents by liquid chromatography-electrospray ionization-tandem mass spectrometry
    Manting Lin, Shan Guo, Di Xie, Sheng Li, Hankun Hu
    LWT.2022; 163: 113497.     CrossRef
  • The potential role of medicinal mushrooms as prebiotics in aquaculture: A review
    Kannan Mohan, Durairaj Karthick Rajan, Thirunavukkarasu Muralisankar, Abirami Ramu Ganesan, Kasi Marimuthu, Palanivel Sathishkumar
    Reviews in Aquaculture.2022; 14(3): 1300.     CrossRef
  • Glyceroglycolipids from the solid culture of Ophiocordyceps sinensis strain LY34 isolated from Tibet of China
    Baosong Chen, Jinghan Lin, Ao Xu, Dan Yu, Dorji Phurbu, Huanqin Dai, Yi Li, Hongwei Liu
    Mycology.2022; 13(3): 185.     CrossRef
  • Efficacy of Aqueous Extract of Chinese Caterpillar Mushroom Ophiocordyceps sinensis (Ascomycota) Against Simulated Altitude Stress and Subacute Toxicity Studies
    Purva Sharma, Rajkumar Tulsawani
    International Journal of Medicinal Mushrooms.2022; 24(11): 21.     CrossRef
  • Microbial Diversity Analyses of Fertilized Thitarodes Eggs and Soil Provide New Clues About the Occurrence of Chinese Cordyceps
    Yue-Hui Hong, Zhan-Hua Mai, Cheng-Ji Li, Qiu-Yi Zheng, Lian-Xian Guo
    Current Microbiology.2022;[Epub]     CrossRef
  • Novel formulation development from Ophiocordyceps sinensis (Berk.) for management of high-altitude maladies
    Rakhee, Jigni Mishra, Renu Bala Yadav, D. K. Meena, Rajesh Arora, R. K. Sharma, Kshipra Misra
    3 Biotech.2021;[Epub]     CrossRef
  • Advances in research on chemical constituents and pharmacological effects of Paecilomyces hepiali
    Akang Dan, Yujia Hu, Ruyan Chen, Xiangyang Lin, Yongqi Tian, Shaoyun Wang
    Food Science and Human Wellness.2021; 10(4): 401.     CrossRef
  • Typification of Sphaeria sinensis to precisely fix the application of the name of the economically important Chinese caterpillar fungus, Ophiocordyceps sinensis
    Yi Li, Lan Jiang, David L. Hawksworth, Yong‐Hui Wang, Jiao‐Jiao Lu, Yi‐Jian Yao
    TAXON.2021; 70(6): 1329.     CrossRef
  • Potential range expansion and niche shift of the invasive Hyphantria cunea between native and invasive countries
    Xinggang Tang, Yingdan Yuan, Xiaofei Liu, Jinchi Zhang
    Ecological Entomology.2021; 46(4): 910.     CrossRef
  • Structure and immunomodulatory activity of a water-soluble α-glucan from Hirsutella sinensis mycelia
    Lin Rong, Guoqiang Li, Yuxia Zhang, Yuancan Xiao, Yajun Qiao, Mengmeng Yang, Lixin Wei, Hongtao Bi, Tingting Gao
    International Journal of Biological Macromolecules.2021; 189: 857.     CrossRef
  • Chinese caterpillar fungus (Ophiocordyceps sinensis) in China: Current distribution, trading, and futures under climate change and overexploitation
    Yanqiang Wei, Liang Zhang, Jinniu Wang, Wenwen Wang, Naudiyal Niyati, Yanlong Guo, Xufeng Wang
    Science of The Total Environment.2021; 755: 142548.     CrossRef
  • Moderate warming will expand the suitable habitat of Ophiocordyceps sinensis and expand the area of O. sinensis with high adenosine content
    Yanlong Guo, Zefang Zhao, Xin Li
    Science of The Total Environment.2021; 787: 147605.     CrossRef
  • The complete mitochondrial genome of Ophiocordyceps gracilis and its comparison with related species
    Aifeire Abuduaini, Yuan-Bing Wang, Hui-Ying Zhou, Rui-Ping Kang, Ming-Liang Ding, Yu Jiang, Fei-Ya Suo, Luo-Dong Huang
    IMA Fungus.2021;[Epub]     CrossRef
  • Arsenic Content, Speciation, and Distribution in Wild Cordyceps sinensis
    Yuancan Xiao, Cen Li, Wei Xu, Yuzhi Du, Ming Zhang, Hongxia Yang, Lixin Wei, Hongtao Bi, Adolfo Andrade-Cetto
    Evidence-Based Complementary and Alternative Medicine.2021; 2021: 1.     CrossRef
  • A simple and effective method to discern the true commercial Chinese cordyceps from counterfeits
    Fu-Li Zhang, Xiao-Feng Yang, Dong Wang, Shao-Rong Lei, Ling-An Guo, Wen-Juan Liu, Jun Song
    Scientific Reports.2020;[Epub]     CrossRef
  • Analysis of Volatile Components in Different Ophiocordyceps sinensis and Insect Host Products
    Xuehong Qiu, Li Cao, Richou Han
    Molecules.2020; 25(7): 1603.     CrossRef
  • Quorum Sensing Activity and Hyphal Growth by External Stimuli in the Entomopathogenic Fungus Ophiocordyceps sinensis
    Guiqing Liu, Li Cao, Xuehong Qiu, Richou Han
    Insects.2020; 11(4): 205.     CrossRef
  • Genomic analyses reveal evolutionary and geologic context for the plateau fungus Ophiocordyceps sinensis
    Jie Liu, Linong Guo, Zongwei Li, Zhe Zhou, Zhen Li, Qian Li, Xiaochen Bo, Shengqi Wang, Junli Wang, Shuangcheng Ma, Jian Zheng, Ying Yang
    Chinese Medicine.2020;[Epub]     CrossRef
  • Comparative metabolic profiling of Ophiocordyceps sinensis and its cultured mycelia using GC–MS
    Jianshuang Zhang, Hao Yu, Shaosong Li, Xin Zhong, Haizhen Wang, Xin Liu
    Food Research International.2020; 134: 109241.     CrossRef
  • Uncovering fungal community composition in natural habitat of Ophiocordyceps sinensis using high-throughput sequencing and culture-dependent approaches
    Chuan-Bo Zhang, Chao-Hui Ren, Yan-Li Wang, Qi-Qi Wang, Yun-Sheng Wang, Qing-Bei Weng
    BMC Microbiology.2020;[Epub]     CrossRef
  • Revealing mitogenome-wide DNA methylation and RNA editing of three Ascomycotina fungi using SMRT sequencing
    Chaoxia Wang, Jianhua Feng, Yujiao Chen, Dongmei Li, Li Liu, Yuqian Wu, Shujun Zhang, Simiao Du, Yaozhou Zhang
    Mitochondrion.2020; 51: 88.     CrossRef
  • Microscopic Authentication of Commercial Herbal Products in the Globalized Market: Potential and Limitations
    Mihael Cristin Ichim, Annette Häser, Peter Nick
    Frontiers in Pharmacology.2020;[Epub]     CrossRef
  • Vegetative development and host immune interaction of Ophiocordyceps sinensis within the hemocoel of the ghost moth larva, Thitarodes xiaojinensis
    Miaomiao Li, Qian Meng, Huan Zhang, Ruoyao Ni, Guiling Zhou, Yanni Zhao, Peipei Wu, Ruihao Shu, Qilian Qin, Jihong Zhang
    Journal of Invertebrate Pathology.2020; 170: 107331.     CrossRef
  • Composition and predictive functional analysis of bacterial communities inhabiting Chinese Cordyceps insight into conserved core microbiome
    Fei Xia, Xin Zhou, Yan Liu, Yuling Li, Xiaohui Bai, Xuanwei Zhou
    BMC Microbiology.2019;[Epub]     CrossRef
  • Characterization of Humic Substances in the Soils of Ophiocordyceps sinensis Habitats in the Sejila Mountain, Tibet: Implication for the Food Source of Thitarodes Larvae
    Yan Li, Lian-Xian Guo, Qian-Zhi Zhou, Di Chen, Jin-Zhong Liu, Xiao-Ming Xu, Jiang-Hai Wang
    Molecules.2019; 24(2): 246.     CrossRef
  • Artificial Cultivation of the Chinese Cordyceps From Injected Ghost Moth Larvae
    Guiqing Liu, Richou Han, Li Cao, Rebecca Schmidt-Jeffris
    Environmental Entomology.2019; 48(5): 1088.     CrossRef
  • Comparative study of the composition of cultivated, naturally grown Cordyceps sinensis, and stiff worms across different sampling years
    Yujue Zhou, Min Wang, Hui Zhang, Zhuo Huang, Jun Ma, Branislav T. Šiler
    PLOS ONE.2019; 14(12): e0225750.     CrossRef
  • Complete mitochondrial genome of two Thitarodes species (Lepidoptera, Hepialidae), the host moths of Ophiocordyceps sinensis and phylogenetic implications
    Min Zhang, Zhimei Gao, Jie Yin, Tingting Zhang, Xueyao Zhang, Dongwei Yuan, Tao Li, Yang Zhong, Enbo Ma, Zhumei Ren
    International Journal of Biological Macromolecules.2019; 140: 794.     CrossRef
  • Phylogeographic structures of the host insects of Ophiocordyceps sinensis
    Yongdong Dai, Changkui Wu, Yuanbing Wang, Yao Wang, Luodong Huang, Xijun Dang, Xuanxue Mo, Pusheng Zeng, Zhuliang Yang, Darong Yang, Canming Zhang, Paul Lemetti, Hong Yu
    Zoology.2019; 134: 27.     CrossRef
  • High altitude organic gold: The production network for Ophiocordyceps sinensis from far-western Nepal
    Mariève Pouliot, Dipesh Pyakurel, Carsten Smith-Hall
    Journal of Ethnopharmacology.2018; 218: 59.     CrossRef
  • Investigation on natural resources and species conservation of Ophiocordyceps sinensis, the famous medicinal fungus endemic to the Tibetan Plateau
    Wenjing Wang, Ke Wang, Xiaoliang Wang, Ruiheng Yang, Yi Li, Yijian Yao
    Protein & Cell.2018; 9(8): 671.     CrossRef
  • Fungus-larva relation in the formation of Cordyceps sinensis as revealed by stable carbon isotope analysis
    Lian-Xian Guo, Yue-Hui Hong, Qian-Zhi Zhou, Qing Zhu, Xiao-Ming Xu, Jiang-Hai Wang
    Scientific Reports.2017;[Epub]     CrossRef
  • SMRT Sequencing Revealed Mitogenome Characteristics and Mitogenome-Wide DNA Modification Pattern in Ophiocordyceps sinensis
    Xincong Kang, Liqin Hu, Pengyuan Shen, Rui Li, Dongbo Liu
    Frontiers in Microbiology.2017;[Epub]     CrossRef
  • The mitochondrial genome of the lepidopteran host cadaver (Thitarodes sp.) of Ophiocordyceps sinensis and related phylogenetic analysis
    Xincong Kang, Yongquan Hu, Jiang Hu, Liqin Hu, Feng Wang, Dongbo Liu
    Gene.2017; 598: 32.     CrossRef
  • Range shifts in response to climate change of Ophiocordyceps sinensis, a fungus endemic to the Tibetan Plateau
    Yujing Yan, Yi Li, Wen-Jing Wang, Jin-Sheng He, Rui-Heng Yang, Hai-Jun Wu, Xiao-Liang Wang, Lei Jiao, Zhiyao Tang, Yi-Jian Yao
    Biological Conservation.2017; 206: 143.     CrossRef
  • Safety assessment of cultivated fruiting body of Ophiocordyceps sinensis evaluated through subacute toxicity in rats
    Shin Yee Fung, Sook Shien Lee, Nget Hong Tan, Jayalakshmi Pailoor
    Journal of Ethnopharmacology.2017; 206: 236.     CrossRef
  • Detection of Ophiocordyceps sinensis and Its Common Adulterates Using Species-Specific Primers
    Yang Liu, Xiao-yue Wang, Zi-tong Gao, Jian-ping Han, Li Xiang
    Frontiers in Microbiology.2017;[Epub]     CrossRef
  • Stable Carbon Isotope Composition of the Lipids in Natural Ophiocordyceps sinensis from Major Habitats in China and Its Substitutes
    Lian-Xian Guo, Xiao-Ming Xu, Yue-Hui Hong, Yan Li, Jiang-Hai Wang
    Molecules.2017; 22(9): 1567.     CrossRef
  • Potential molecular mechanisms for fruiting body formation of Cordyceps illustrated in the case ofCordyceps sinensis
    Kun Feng, Lan-ying Wang, Dong-jiang Liao, Xin-peng Lu, De-jun Hu, Xiao Liang, Jing Zhao, Zi-yao Mo, Shao-ping Li
    Mycology.2017; 8(4): 231.     CrossRef
  • Collecting Ophiocordyceps sinensis: an emerging livelihood strategy in the Garhwal, Indian Himalaya
    Laura Caplins, Sarah J. Halvorson
    Journal of Mountain Science.2017; 14(2): 390.     CrossRef
  • Extraction, characterization and antioxidant activity of mycelial polysaccharides from Paecilomyces hepiali HN1
    Zhongwei Wu, Mingxia Zhang, Minhao Xie, Zhuqing Dai, Xiaoqing Wang, Bing Hu, Hong Ye, Xiaoxiong Zeng
    Carbohydrate Polymers.2016; 137: 541.     CrossRef
  • Cordyceps collected from Bhutan, an appropriate alternative of Cordyceps sinensis
    Ding-Tao Wu, Guang-Ping Lv, Jian Zheng, Qian Li, Shuang-Cheng Ma, Shao-Ping Li, Jing Zhao
    Scientific Reports.2016;[Epub]     CrossRef
  • Laboratory Rearing ofThitarodes armoricanusandThitarodes jianchuanensis(Lepidoptera: Hepialidae), Hosts of the Chinese Medicinal FungusOphiocordyceps sinensis(Hypocreales: Ophiocordycipitaceae)
    Zui Tao, Li Cao, Yi Zhang, Yunshou Ye, Richou Han
    Journal of Economic Entomology.2016; 109(1): 176.     CrossRef
  • Morphological Observations and Fatty Acid Composition of Indoor-Cultivated Cordyceps sinensis at a High-Altitude Laboratory on Sejila Mountain, Tibet
    Lian-Xian Guo, Xiao-Ming Xu, Fu-Rui Liang, Jian-Ping Yuan, Juan Peng, Chou-Fei Wu, Jiang-Hai Wang, Rita Grosch
    PLOS ONE.2015; 10(5): e0126095.     CrossRef
  • Metabolic characterization of natural and cultured Ophicordyceps sinensis from different origins by 1H NMR spectroscopy
    Jianshuang Zhang, Xin Zhong, Shaosong Li, Guren Zhang, Xin Liu
    Journal of Pharmaceutical and Biomedical Analysis.2015; 115: 395.     CrossRef
  • Bacterial diversity in native habitats of the medicinal fungus Ophiocordyceps sinensis on Tibetan Plateau as determined using Illumina sequencing data
    Rui-Heng Yang, Xiao-Liang Wang, Jin-He Su, Yi Li, Si-Ping Jiang, Fei Gu, Yi-Jian Yao
    FEMS Microbiology Letters.2015;[Epub]     CrossRef
  • Complete mitochondrial genome of the medicinal fungus Ophiocordyceps sinensis
    Yi Li, Xiao-Di Hu, Rui-Heng Yang, Tom Hsiang, Ke Wang, De-Quan Liang, Fan Liang, De-Ming Cao, Fan Zhou, Ge Wen, Yi-Jian Yao
    Scientific Reports.2015;[Epub]     CrossRef
  • Quantitative assessment of the ecological impact of Chinese cordyceps collection in the typical production areas
    Yanda Xu, Fen Li, Cui Xu, Shanghua Luo, Shijun Chao, Yang Guo, Chengcheng Liu, Linbo Zhang
    Écoscience.2015; 22(2-4): 167.     CrossRef
  • Impact of Climate Change on Potential Distribution of Chinese Caterpillar Fungus (Ophiocordyceps sinensis) in Nepal Himalaya
    Uttam Babu Shrestha, Kamaljit S. Bawa, Helge Thorsten Lumbsch
    PLoS ONE.2014; 9(9): e106405.     CrossRef
  • Transcriptome analysis of the Ophiocordyceps sinensis fruiting body reveals putative genes involved in fruiting body development and cordycepin biosynthesis
    Li Xiang, Ying Li, Yingjie Zhu, Hongmei Luo, Chunfang Li, Xiaolan Xu, Chao Sun, Jingyuan Song, Linchun Shi, Liu He, Wei Sun, Shilin Chen
    Genomics.2014; 103(1): 154.     CrossRef
  • Advances in research of the artificial cultivation ofOphiocordyceps sinensisin China
    Xuan-Wei Zhou, Lin-Jun Li, En-Wei Tian
    Critical Reviews in Biotechnology.2014; 34(3): 233.     CrossRef
  • Detection of Ophiocordyceps sinensis in the roots of plants in alpine meadows by nested-touchdown polymerase chain reaction
    Xin Zhong, Qing-yun Peng, Shao-Song Li, Hai Chen, Hong-Xia Sun, Gu-Ren Zhang, Xin Liu
    Fungal Biology.2014; 118(4): 359.     CrossRef
  • Chasing Chinese Caterpillar Fungus (Ophiocordyceps sinensis) Harvesters in the Himalayas: Harvesting Practice and Its Conservation Implications in Western Nepal
    Uttam Babu Shrestha, Sujata Shrestha, Shivaraj Ghimire, Kamal Nepali, Bharat Babu Shrestha
    Society & Natural Resources.2014; 27(12): 1242.     CrossRef
  • Recent advances in Cordyceps sinensis polysaccharides: Mycelial fermentation, isolation, structure, and bioactivities: A review
    Jing-Kun Yan, Wen-Qiang Wang, Jian-Yong Wu
    Journal of Functional Foods.2014; 6: 33.     CrossRef
  • Evaluation of nutritional and physical stress conditions during vegetative growth on conidial production and germination inOphiocordyceps sinensis
    Shu-Yu Ren, Yi-Jian Yao
    FEMS Microbiology Letters.2013; 346(1): 29.     CrossRef
  • A real-time qPCR assay to quantify Ophiocordyceps sinensis biomass in Thitarodes larvae
    Wei Lei, Shaosong Li, Qingyun Peng, Guren Zhang, Xin Liu
    Journal of Microbiology.2013; 51(2): 229.     CrossRef
  • DNA barcoding the commercial Chinese caterpillar fungus
    Li Xiang, Jingyuan Song, Tianyi Xin, Yingjie Zhu, Linchun Shi, Xiaolan Xu, Xiaohui Pang, Hui Yao, Wenjia Li, Shilin Chen
    FEMS Microbiology Letters.2013; : n/a.     CrossRef
  • Detection ofOphiocordyceps sinensisin soil by quantitative real-time PCR
    Qingyun Peng, Xin Zhong, Wei Lei, Guren Zhang, Xin Liu
    Canadian Journal of Microbiology.2013; 59(3): 204.     CrossRef
  • On the reliability of DNA sequences ofOphiocordyceps sinensisin public databases
    Shu Zhang, Yong-Jie Zhang, Xing-Zhong Liu, Hong Zhang, Dian-Sheng Liu
    Journal of Industrial Microbiology and Biotechnology.2013; 40(3-4): 365.     CrossRef
  • A Systematic Review of the Mysterious Caterpillar Fungus Ophiocordyceps sinensis in DongChongXiaCao (冬蟲夏草 Dōng Chóng Xià Cǎo) and Related Bioactive Ingredients
    Hui-Chen Lo, Chienyan Hsieh, Fang-Yi Lin, Tai-Hao Hsu
    Journal of Traditional and Complementary Medicine.2013; 3(1): 16.     CrossRef
  • Systematic analyses of Ophiocordyceps lanpingensis sp. nov., a new species of Ophiocordyceps in China
    Zi-Hong Chen, Yong-Dong Dai, Hong Yu, Kun Yang, Zhong-Lin Yang, Feng Yuan, Wen-Bo Zeng
    Microbiological Research.2013; 168(8): 525.     CrossRef
  • Development of conventional and nested PCR assays for the detection of Ophiocordyceps sinensis
    Guo‐Sheng Jin, Xiao‐Liang Wang, Yi Li, Wen‐Jing Wang, Rui‐Heng Yang, Shu‐Yu Ren, Yi‐Jian Yao
    Journal of Basic Microbiology.2013; 53(4): 340.     CrossRef
Reviews
REVIEW] Current understanding of microbiota- and dietary-therapies for treating inflammatory bowel disease
Taekil Eom , Yong Sung Kim , Chang Hwan Choi , Michael J. Sadowsky , Tatsuya Unno
J. Microbiol. 2018;56(3):189-198.   Published online February 28, 2018
DOI: https://doi.org/10.1007/s12275-018-8049-8
  • 360 View
  • 0 Download
  • 89 Crossref
AbstractAbstract PDF
Inflammatory bowel disease (IBD) is a result of chronic inflammation caused, in some part, by dysbiosis of intestinal microbiota, mainly commensal bacteria. Gut dysbiosis can be caused by multiple factors, including abnormal immune responses which might be related to genetic susceptibility, infection, western dietary habits, and administration of antibiotics. Consequently, the disease itself is characterized as having multiple causes, etiologies, and severities. Recent studies have identified > 200 IBD risk loci in the host. It has been postulated that gut microbiota interact with these risk loci
result
ing in dysbiosis, and this subsequently leads to the development of IBD. Typical gut microbiota in IBD patients are characterized with decrease in species richness and many of the commensal, and beneficial, fecal bacteria such as Firmicutes and Bacteroidetes and an increase or bloom of Proteobacteria. However, at this time, cause and effect relationships have not been rigorously established. While treatments of IBD usually includes medications such as corticosteroids, 5-aminosalicylates, antibiotics, immunomodulators, and anti- TNF agents, restoration of gut dysbiosis seems to be a safer and more sustainable approach. Bacteriotherapies (now called microbiota therapies) and dietary interventions are effective way to modulate gut microbiota. In this review, we summarize factors involved in IBD and studies attempted to treat IBD with probiotics. We also discuss the potential use of microbiota therapies as one promising approach in treating IBD. As therapies based on the modulation of gut microbiota becomes more common, future studies should include individual gut microbiota differences to develop personalized therapy for IBD.

Citations

Citations to this article as recorded by  
  • Benzo[a]Pyrene Induces Pyroptotic Colon Damage and Gut Dysbacteriosis by Activating Aryl Hydrocarbon Receptor
    Yingyu Jia, Yao Meng, Zhulin Wang, Hao Li, Jianke Li, Li Yuan
    Food Biophysics.2025;[Epub]     CrossRef
  • Patient–donor similarity and donor-derived species contribute to the outcome of fecal microbiota transplantation for ulcerative colitis
    Dai Ishikawa, Hikaru Watanabe, Kei Nomura, Xiaochen Zhang, Takafumi Maruyama, Rina Odakura, Masao Koma, Tomoyoshi Shibuya, Taro Osada, Shinji Fukuda, Taku Nakahara, Jun Terauchi, Akihito Nagahara, Takuji Yamada
    Journal of Crohn's and Colitis.2025;[Epub]     CrossRef
  • Sturgeon cartilage-derived chondroitin sulfate exhibited anti-inflammatory activity against dextran sulfate sodium-induced colitis via modification of gut microbiota
    Ruiyun Wu, Zixin Han, Zhenyu Wang, Pinglan Li, Nan Shang
    Food Science and Human Wellness.2025; 14(4): 9250227.     CrossRef
  • Intestinal microecology in pediatric surgery-related gastrointestinal diseases: Current insights and future perspectives
    Yuqing Wu, Suolin Li, Lin Liu, Xiaoyi Zhang, Jiaxun Lv, Qinqin Li, Yingchao Li
    Journal of Pediatric Surgery Open.2024; 6: 100134.     CrossRef
  • Gut Microbiome as a Target of Intervention in Inflammatory Bowel Disease Pathogenesis and Therapy
    Helal F. Hetta, Yasmin N. Ramadan, Ahmad A. Alharbi, Shomokh Alsharef, Tala T. Alkindy, Alanoud Alkhamali, Abdullah S. Albalawi, Hussein El Amin
    Immuno.2024; 4(4): 400.     CrossRef
  • Intestinal and hepatic benefits of BBR-EVO on DSS-induced experimental colitis in mice
    Wenjia Wang, Yiheng Han, Wen Yin, Qiaozhi Wang, Yi Wu, Maobo Du
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • Exploring the Connections: Autophagy, Gut Microbiota, and Inflammatory Bowel Disease Pathogenesis
    Arunkumar Subramanian, Afrarahamed J, Tamilanban T, Vinoth Kumarasamy, M Yasmin Begum, Mahendran Sekar, Vetriselvan Subramaniyan, Ling Shing Wong, Adel Al Fatease
    Journal of Inflammation Research.2024; Volume 17: 10453.     CrossRef
  • Network Analysis of Gut Microbial Communities Reveals Key Reason for Quercetin Protects against Colitis
    Yanan Lv, Jing Peng, Xiaoyu Ma, Zeyi Liang, Ghasem Hosseini Salekdeh, Qunhua Ke, Wenxiang Shen, Zuoting Yan, Hongsheng Li, Shengyi Wang, Xuezhi Ding
    Microorganisms.2024; 12(10): 1973.     CrossRef
  • Analysis of the Preventive Effect of Lonicera caerulea Pomace and Its Isolated Components on Colitis in Mice Based on Gut Microbiota and Serum Metabolomics
    Zinuo Zhou, Xinwen Huang, Baixi Zhang
    Antioxidants.2024; 13(12): 1478.     CrossRef
  • Stachyose Exerts Anticolitis Efficacy by Re-balancing Treg/Th17 and Activating the Butyrate-Derived PPARγ Signaling Pathway
    Ningning He, Kaiwei Chen, Shengnan Yu, Luwen Cui, Son Hai Vu, Samil Jung, Myeong-sok Lee, Shangyong Li
    Journal of Agricultural and Food Chemistry.2024; 72(21): 12171.     CrossRef
  • Probiotic Microorganisms in Inflammatory Bowel Diseases: Live Biotherapeutics as Food
    Emanuelle Natalee Santos, Karina Teixeira Magalhães-Guedes, Fernando Elias de Melo Borges, Danton Diego Ferreira, Daniele Ferreira da Silva, Pietro Carlos Gonçalves Conceição, Ana Katerine de Carvalho Lima, Lucas Guimarães Cardoso, Marcelo Andrés Umsza-Gu
    Foods.2024; 13(24): 4097.     CrossRef
  • Raffinose Ameliorates DSS-Induced Colitis in Mice by Modulating Gut Microbiota and Targeting the Inflammatory TLR4–MyD88–NF-κB Signaling Pathway
    Peng Zhang, Yuyang Xue, Zhengyu Cao, Yaya Guo, Xiaotong Pang, Cheng Chen, Wenju Zhang
    Foods.2024; 13(12): 1849.     CrossRef
  • Fecal Microbiota Transplantation: Indications, Methods, and Challenges
    Jee Young Lee, Yehwon Kim, Jiyoun Kim, Jiyeun Kate Kim
    Journal of Microbiology.2024; 62(12): 1057.     CrossRef
  • Ethyl acetate extract of Terminalia chebula alleviates DSS-induced ulcerative colitis in C57BL/6 mice
    Wan-Rong Dong, Yao-Yao Li, Tian-Tian Liu, Gao Zhou, Yu-Xin Chen
    Frontiers in Pharmacology.2023;[Epub]     CrossRef
  • A Novel Polysaccharide Separated from Panax Notoginseng Residue Ameliorates Restraint Stress‐ and Lipopolysaccharide‐induced Enteritis in Mice
    Bi Luo, Fan Yang, Peng Chen, Hao‐Yu Zuo, Yun‐Fei Liang, Ming‐Hua Xian, Nan Tang, Guo‐En Wang
    Chemistry & Biodiversity.2023;[Epub]     CrossRef
  • Gut microbiome, metabolome, host immunity associated with inflammatory bowel disease and intervention of fecal microbiota transplantation
    Rongrong Wu, Rui Xiong, Yan Li, Junru Chen, Ru Yan
    Journal of Autoimmunity.2023; 141: 103062.     CrossRef
  • Current advances in the anti-inflammatory effects and mechanisms of natural polysaccharides
    Dan Yuan, Chao Li, Qiang Huang, Xiong Fu, Hao Dong
    Critical Reviews in Food Science and Nutrition.2023; 63(22): 5890.     CrossRef
  • Poria cocos oligosaccharides ameliorate dextran sodium sulfate-induced colitis mice by regulating gut microbiota dysbiosis
    Ke Lan, Huabing Yang, Junping Zheng, Haiming Hu, Tianxiang Zhu, Xiaojuan Zou, Baifei Hu, Hongtao Liu
    Food & Function.2023; 14(2): 857.     CrossRef
  • Chiral coating-mediated interactions of bacteria with diverse biointerfaces
    Hejin Jiang, Rui Liu, Ying Liu, Huilong Luo, Zhenping Cao, Jinyao Liu
    Science China Chemistry.2023; 66(12): 3594.     CrossRef
  • Recent Advances in the Nanoshells Approach for Encapsulation of Single Probiotics
    Cheng Chen, Ziyu Zhu
    Drug Design, Development and Therapy.2023; Volume 17: 2763.     CrossRef
  • Interplay of broccoli/broccoli sprout bioactives with gut microbiota in reducing inflammation in inflammatory bowel diseases
    Johanna Holman, Molly Hurd, Peter L. Moses, Gary M. Mawe, Tao Zhang, Suzanne L. Ishaq, Yanyan Li
    The Journal of Nutritional Biochemistry.2023; 113: 109238.     CrossRef
  • Lonicera caerulea Pomace Alleviates DSS-Induced Colitis via Intestinal Barrier Improvement and Gut Microbiota Modulation
    Baixi Zhang, Xinwen Huang, Lijuan Niu, Xuemei Chen, Bo Hu, Xiaoshu Tang
    Foods.2023; 12(18): 3329.     CrossRef
  • The Combined Use of SCD Probiotics and Tauroursodeoksikolik Asit (TUDCA) is More Effective in Controlling Anxiety-Like Behavior in Aged Rats
    Taha CEYLANİ, Hikmet Taner TEKER
    Bitlis Eren Üniversitesi Fen Bilimleri Dergisi.2023; 12(1): 242.     CrossRef
  • The Possible Role of Probiotic Supplementation in Inflammation: A Narrative Review
    Alessandro Colletti, Marzia Pellizzato, Arrigo Francesco Cicero
    Microorganisms.2023; 11(9): 2160.     CrossRef
  • A polysaccharide from Allium tenuissimum L. flowers relieves ulcerative colitis by regulating the inflammatory signaling pathway and gut microbiota
    Yan Zhang, Siyu Yu, Jia Liu, Ying Liu, Jie Luo, Yong Liu
    Food & Function.2023; 14(14): 6582.     CrossRef
  • Molecular mechanisms of Huanglian jiedu decoction on ulcerative colitis based on network pharmacology and molecular docking
    Jing Yang, Chaotao Tang, Ruiri Jin, Bixia Liu, Peng Wang, Youxiang Chen, Chunyan Zeng
    Scientific Reports.2022;[Epub]     CrossRef
  • Effects of β-glucan, probiotics, and synbiotics on obesity-associated colitis and hepatic manifestations in C57BL/6J mice
    Vuong Vu, Karthika Muthuramalingam, Vineet Singh, Changlim Hyun, Young Mee Kim, Tatsuya Unno, Moonjae Cho
    European Journal of Nutrition.2022; 61(2): 793.     CrossRef
  • Human umbilical cord-derived mesenchymal stem cells ameliorate experimental colitis by normalizing the gut microbiota
    Fan Yang, Beibei Ni, Qiuli Liu, Fangping He, Li Li, Xuemei Zhong, Xiaofan Zheng, Jianxi Lu, Xiaoyan Chen, Huizhu Lin, Ruixuan Xu, Yizhan He, Qi Zhang, Xiaoguang Zou, Wenjie Chen
    Stem Cell Research & Therapy.2022;[Epub]     CrossRef
  • The Protective Effect of Sulforaphane on Dextran Sulfate Sodium-Induced Colitis Depends on Gut Microbial and Nrf2-Related Mechanism
    Canxia He, Mingfei Gao, Xiaohong Zhang, Peng Lei, Haitao Yang, Yanping Qing, Lina Zhang
    Frontiers in Nutrition.2022;[Epub]     CrossRef
  • The Attenuation of Chronic Ulcerative Colitis by (R)‐salbutamol in Repeated DSS‐Induced Mice
    Liangjun Deng, Haihua Guo, Shanping Wang, Xiaoming Liu, Yue Lin, Rui Zhang, Wen Tan, Ivan Srejovic
    Oxidative Medicine and Cellular Longevity.2022;[Epub]     CrossRef
  • CROHN’S DISEASE: A REVIEW ON EPIDEMIOLOGY, DIAGNOSIS AND THERAPEUTIC MANAGEMENT
    Mohammad Mukim, Mohit Chaturvedi, Rakesh Patel, Supriya Roy, Pratishtha Sharma, Varunesh Chaturvedi, Saloni Goyal, Mohsina F. Patewkar
    Indian Drugs.2022; 59(09): 16.     CrossRef
  • Poly‐γ‐Glutamic Acid Microgel‐Encapsulated Probiotics with Gastric Acid Resistance and Smart Inflammatory Factor Targeted Delivery Performance to Ameliorate Colitis
    Rui Wang, Kun Guo, Weijie zhang, Yineng He, Kai Yang, Qian Chen, Liang Yang, Zhengao Di, Jiangkai Qiu, Peng Lei, Yian Gu, Zhengshan Luo, Xiaoqi Xu, Zongqi Xu, Xiaohai Feng, Sha Li, Ziyi Yu, Hong Xu
    Advanced Functional Materials.2022;[Epub]     CrossRef
  • Probiotic human alcohol dehydrogenase-4 expressing bacteria protects from diet-induced obesity and metabolic impairment: a new concept of disease prevention
    Rajnish Prakash Singh, Max Kolton, Mayan Boker, Noy Bar David, Stefan Green, Aharon Helman, Oren Tirosh, Zvi Hayouka
    Exploration of Digestive Diseases.2022; : 118.     CrossRef
  • (RS)-bambuterol and its enantiomers: Potential improvement of (R)-bambuterol in mice with colitis
    Liangjun Deng, Shanping Wang, Haihua Guo, Xiaoming Liu, Xinfeng Zou, Rui Zhang, Yue Lin, Wen Tan
    International Immunopharmacology.2022; 103: 108501.     CrossRef
  • Chitosan Oligosaccharides Alleviate Colitis by Regulating Intestinal Microbiota and PPARγ/SIRT1-Mediated NF-κB Pathway
    Congcong Guo, Yue Zhang, Tao Ling, Chongjie Zhao, Yanru Li, Meng Geng, Sailun Gai, Wei Qi, Xuegang Luo, Liehuan Chen, Tongcun Zhang, Nan Wang
    Marine Drugs.2022; 20(2): 96.     CrossRef
  • Environmentality in biomedicine: microbiome research and the perspectival body
    Joana Formosinho, Adam Bencard, Louise Whiteley
    Studies in History and Philosophy of Science.2022; 91: 148.     CrossRef
  • Glucocorticosteroids and the Risk of NAFLD in Inflammatory Bowel Disease
    Sara Jarmakiewicz-Czaja, Aneta Sokal, Piotr Pardak, Rafał Filip, Alessandro Granito
    Canadian Journal of Gastroenterology and Hepatology.2022; 2022: 1.     CrossRef
  • Major yolk protein from sea cucumber (Stichopus japonicus) attenuates acute colitis via regulation of microbial dysbiosis and inflammatory responses
    Jianhui Feng, Lina Zhang, Xue Tang, Wei Hu, Peng Zhou
    Food Research International.2022; 151: 110841.     CrossRef
  • Anemoside B4 protects against chronic relapsing colitis in mice by modulating inflammatory response, colonic transcriptome and the gut microbiota
    Qian Han, Li-rong Deng, Min Zou, Hua-zheng Tang, Chang-yin Huang, Fang-jun Chen, Brian Tomlinson, Yan-hong Li
    Phytomedicine.2022; 106: 154416.     CrossRef
  • Alginate Oligosaccharides Ameliorate DSS-Induced Colitis through Modulation of AMPK/NF-κB Pathway and Intestinal Microbiota
    Yue Zhang, Congcong Guo, Yanru Li, Xianlei Han, Xuegang Luo, Liehuan Chen, Tongcun Zhang, Nan Wang, Weiming Wang
    Nutrients.2022; 14(14): 2864.     CrossRef
  • Gut microbiota in antiviral strategy from bats to humans: a missing link in COVID-19
    Jia Luo, Shan Liang, Feng Jin
    Science China Life Sciences.2021; 64(6): 942.     CrossRef
  • Curcumin modulates gut microbiota and improves renal function in rats with uric acid nephropathy
    Xueling Xu, Huifang Wang, Dandan Guo, Xiaofei Man, Jun Liu, Junying Li, Congjuan Luo, Ming Zhang, Li Zhen, Xuemei Liu
    Renal Failure.2021; 43(1): 1063.     CrossRef
  • Prebiotics, Probiotics, Synbiotics, Paraprobiotics and Postbiotic Compounds in IBD
    Adrian Martyniak, Aleksandra Medyńska-Przęczek, Andrzej Wędrychowicz, Szymon Skoczeń, Przemysław J. Tomasik
    Biomolecules.2021; 11(12): 1903.     CrossRef
  • Mitochondrial Metabolism in the Intestinal Stem Cell Niche—Sensing and Signaling in Health and Disease
    Elisabeth Urbauer, Eva Rath, Dirk Haller
    Frontiers in Cell and Developmental Biology.2021;[Epub]     CrossRef
  • GB1a Ameliorates Ulcerative Colitis via Regulation of the NF-κB and Nrf2 Signaling Pathways in an Experimental Model
    Yuanyuan Yu, Congmin Zheng, Xu Lu, Changsheng Deng, Qin Xu, Wenfeng Guo, Qingye Wu, Qi Wang, Changhui Liu, Xinan Huang, Jianping Song
    Frontiers in Medicine.2021;[Epub]     CrossRef
  • Dietary patterns, food groups and nutrients in Crohn’s disease: associations with gut and systemic inflammation
    S. Ali Naqvi, Lorian M. Taylor, Remo Panaccione, Subrata Ghosh, Herman W. Barkema, Naomi Hotte, Nusrat Shommu, Sandeep Kaur, Raylene A. Reimer, Karen L. Madsen, Maitreyi Raman
    Scientific Reports.2021;[Epub]     CrossRef
  • Ginger Alleviates DSS-Induced Ulcerative Colitis Severity by Improving the Diversity and Function of Gut Microbiota
    Shanshan Guo, Wenye Geng, Shan Chen, Li Wang, Xuli Rong, Shuocun Wang, Tingfang Wang, Liyan Xiong, Jinghua Huang, Xiaobin Pang, Yiming Lu
    Frontiers in Pharmacology.2021;[Epub]     CrossRef
  • Long-term and continuous administration of Bacillus subtilis during remission effectively maintains the remission of inflammatory bowel disease by protecting intestinal integrity, regulating epithelial proliferation, and reshaping microbial structure and
    Yongqiang Liu, Fang Yin, Linsheng Huang, Hongfei Teng, Tongyi Shen, Huanlong Qin
    Food & Function.2021; 12(5): 2201.     CrossRef
  • Cereal Vinegar Sediment Alleviates Spontaneous Ulcerative Colitis in Il‐10 Deficient Mice
    Yan Geng, Yuanjia Yue, Qijie Guan, Yilin Ren, Lin Guo, Yifei Fan, Zhen‐Ming Lu, Jin‐Song Shi, Zheng‐Hong Xu
    Molecular Nutrition & Food Research.2021;[Epub]     CrossRef
  • Impact of 2′-Fucosyllactose on Gut Microbiota Composition in Adults with Chronic Gastrointestinal Conditions: Batch Culture Fermentation Model and Pilot Clinical Trial Findings
    Jennifer Joan Ryan, Andrea Monteagudo-Mera, Nikhat Contractor, Glenn R. Gibson
    Nutrients.2021; 13(3): 938.     CrossRef
  • Effects of Anti-Inflammatory Treatment and Surgical Intervention on Endothelial Glycocalyx, Peripheral and Coronary Microcirculatory Function and Myocardial Deformation in Inflammatory Bowel Disease Patients: A Two-Arms Two-Stage Clinical Trial
    Charilaos Triantafyllou, Maria Nikolaou, Ignatios Ikonomidis, Giorgos Bamias, Dimitrios Kouretas, Ioanna Andreadou, Maria Tsoumani, John Thymis, Ioannis Papaconstantinou
    Diagnostics.2021; 11(6): 993.     CrossRef
  • Bacteria-Based Microdevices for the Oral Delivery of Macromolecules
    Zhenping Cao, Sisi Lin, Jinyao Liu
    Pharmaceutics.2021; 13(10): 1610.     CrossRef
  • EEG Changes Related to Gut Dysbiosis in Diabetes—Review
    Roxana Toderean, Mihai Dimian, Claudiu Cobuz
    Applied Sciences.2021; 11(24): 11871.     CrossRef
  • The Combined Beneficial Effects of Postbiotic Butyrate on Active Vitamin D3-Orchestrated Innate Immunity to Salmonella Colitis
    Fu-Chen Huang, Shun-Chen Huang
    Biomedicines.2021; 9(10): 1296.     CrossRef
  • Protective Effects of Shrimp Peptide on Dextran Sulfate Sodium-Induced Colitis in Mice
    Xingwei Xiang, Qihong Jiang, Wan Shao, Jinhong Li, Yufang Zhou, Lin Chen, Shanggui Deng, Bin Zheng, Yufeng Chen
    Frontiers in Nutrition.2021;[Epub]     CrossRef
  • Polymerization‐Mediated Multifunctionalization of Living Cells for Enhanced Cell‐Based Therapy
    Chao Pan, Juanjuan Li, Weiliang Hou, Sisi Lin, Lu Wang, Yan Pang, Yufeng Wang, Jinyao Liu
    Advanced Materials.2021;[Epub]     CrossRef
  • High Red Meat Intake Exacerbates Dextran Sulfate-Induced Colitis by Altering Gut Microbiota in Mice
    Dan-ping Li, Min Cui, Fang Tan, Xiao-yan Liu, Ping Yao
    Frontiers in Nutrition.2021;[Epub]     CrossRef
  • Dihydroartemisinin ameliorates dextran sulfate sodium induced inflammatory bowel diseases in mice
    Zili Lei, Yanhong Yang, Shaomin Liu, Yuting Lei, Lanxiang Yang, Xueying Zhang, Wanwan Liu, Huijuan Wu, Changyuan Yang, Jiao Guo
    Bioorganic Chemistry.2020; 100: 103915.     CrossRef
  • Manipulating resident microbiota to enhance regulatory immune function to treat inflammatory bowel diseases
    Yoshiyuki Mishima, Ryan Balfour Sartor
    Journal of Gastroenterology.2020; 55(1): 4.     CrossRef
  • Saikosaponin-d ameliorates dextran sulfate sodium-induced colitis by suppressing NF-κB activation and modulating the gut microbiota in mice
    Puze Li, Minna Wu, Wancheng Xiong, Jinsong Li, Yunying An, Jie Ren, Yingguang Xie, Hongfei Xue, Dong Yan, Min Li, Genshen Zhong
    International Immunopharmacology.2020; 81: 106288.     CrossRef
  • Exosomes in Inflammatory Bowel Disease: What Have We Learned So Far?
    Haichao Wang, Chen Ye, Yaling Wu, Pengyu Yang, Chunqiu Chen, Zhanju Liu, Xiaolei Wang
    Current Drug Targets.2020; 21(14): 1448.     CrossRef
  • Aqueous extract of Bruguiera gymnorrhiza leaves protects against dextran sulfate sodium induced ulcerative colitis in mice via suppressing NF-κB activation and modulating intestinal microbiota
    Jin-Fen Chen, Dan-Dan Luo, Yin-Si Lin, Yu-Hong Liu, Jia-Zhen Wu, Xiao-Qing Yi, Yan Wu, Qian Zhang, Chang-Jun Gao, Jian Cai, Zi-Ren Su
    Journal of Ethnopharmacology.2020; 251: 112554.     CrossRef
  • The Link between Oral and Gut Microbiota in Inflammatory Bowel Disease and a Synopsis of Potential Salivary Biomarkers
    Allison Bartlett, Robert G. Gullickson, Rajan Singh, Seungil Ro, Stanley T. Omaye
    Applied Sciences.2020; 10(18): 6421.     CrossRef
  • Yogurt enriched to correct intestinal microflora in dysbiosis
    V Yu Kontareva, S N Belik, E V Morgul, I F Gorlov, M I Slozhenkina
    IOP Conference Series: Earth and Environmental Science.2020; 548(8): 082051.     CrossRef
  • Predicting Microbe-Disease Association by Learning Graph Representations and Rule-Based Inference on the Heterogeneous Network
    Xiujuan Lei, Yueyue Wang
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Consumption of a baked corn and bean snack reduced chronic colitis inflammation in CD-1 mice via downregulation of IL-1 receptor, TLR, and TNF-α associated pathways
    Ivan Luzardo-Ocampo, Rocio Campos-Vega, Elvira Gonzalez de Mejia, Guadalupe Loarca-Piña
    Food Research International.2020; 132: 109097.     CrossRef
  • The role of a plant-based diet in the pathogenesis, etiology and management of the inflammatory bowel diseases
    Charlene S. J. Grosse, Claus T. Christophersen, Amanda Devine, Ian C. Lawrance
    Expert Review of Gastroenterology & Hepatology.2020; 14(3): 137.     CrossRef
  • Therapeutic effect of n-butanol fraction of Huang-lian-Jie-du Decoction on ulcerative colitis and its regulation on intestinal flora in colitis mice
    Ziwen Yuan, Lihong Yang, Xiaosong Zhang, Peng Ji, Yanming Wei
    Biomedicine & Pharmacotherapy.2020; 121: 109638.     CrossRef
  • Anti-inflammatory activity of grapefruit juice in an in vivo model of ulcerative colitis: Comparability studies of unprocessed and bioprocessed juices
    Carla Mendes, João Rocha, Rosa Direito, Adelaide Fernandes, Bruno Sepodes, Maria-Eduardo Figueira, Maria H. Ribeiro
    Journal of Functional Foods.2019; 63: 103564.     CrossRef
  • Huang-Lian-Jie-Du Decoction Ameliorates Acute Ulcerative Colitis in Mice via Regulating NF-κB and Nrf2 Signaling Pathways and Enhancing Intestinal Barrier Function
    Ziwen Yuan, Lihong Yang, Xiaosong Zhang, Peng Ji, Yongli Hua, Yanming Wei
    Frontiers in Pharmacology.2019;[Epub]     CrossRef
  • The role of the gut microbiota in the treatment of inflammatory bowel diseases
    Ioanna Aggeletopoulou, Christos Konstantakis, Stelios F. Assimakopoulos, Christos Triantos
    Microbial Pathogenesis.2019; 137: 103774.     CrossRef
  • Parenteral Nutrition in Patients with Inflammatory Bowel Disease Systematic Review, Meta-Analysis and Meta-Regression
    Jose M. Comeche, Iris Comino, Cesare Altavilla, Jose Tuells, Ana Gutierrez-Hervas, Pablo Caballero
    Nutrients.2019; 11(12): 2865.     CrossRef
  • Neue medikamentöse Ansätze bei chronisch-entzündlichen Darmerkrankungen
    S. Pröbsting, B. Terjung
    coloproctology.2019; 41(1): 5.     CrossRef
  • Crohn’s Disease Remission with a Plant-Based Diet: A Case Report
    Kelsea Sandefur, Hana Kahleova, Alan N. Desmond, Eden Elfrink, Neal D. Barnard
    Nutrients.2019; 11(6): 1385.     CrossRef
  • Intestinal Sensing by Gut Microbiota: Targeting Gut Peptides
    Mihai Covasa, Richard W. Stephens, Roxana Toderean, Claudiu Cobuz
    Frontiers in Endocrinology.2019;[Epub]     CrossRef
  • Enteral Nutrition in Patients with Inflammatory Bowel Disease. Systematic Review, Meta-Analysis, and Meta-Regression
    Jose M. Comeche, Pablo Caballero, Ana Gutierrez-Hervas, Sofia García-Sanjuan, Iris Comino, Cesare Altavilla, Jose Tuells
    Nutrients.2019; 11(11): 2657.     CrossRef
  • Endothelial and Cardiac Dysfunction in Inflammatory Bowel Diseases: Does Treatment Modify the Inflammatory Load on Arterial and Cardiac Structure and Function?
    Charilaos Triantafyllou, Maria Nikolaou, Ignatios Ikonomidis, Giorgos Bamias, Ioannis Papaconstantinou
    Current Vascular Pharmacology.2019; 18(1): 27.     CrossRef
  • Exosome-Induced Regulation in Inflammatory Bowel Disease
    Huiting Zhang, Liang Wang, Changyi Li, Yue Yu, Yanlin Yi, Jingyu Wang, Dapeng Chen
    Frontiers in Immunology.2019;[Epub]     CrossRef
  • Biointerfacial self-assembly generates lipid membrane coated bacteria for enhanced oral delivery and treatment
    Zhenping Cao, Xinyue Wang, Yan Pang, Shanshan Cheng, Jinyao Liu
    Nature Communications.2019;[Epub]     CrossRef
  • Phloretin ameliorates dextran sulfate sodium-induced ulcerative colitis in mice by regulating the gut microbiota
    Minna Wu, Puze Li, Yunying An, Jie Ren, Dong Yan, Jiazeng Cui, Duan Li, Min Li, Mingyong Wang, Genshen Zhong
    Pharmacological Research.2019; 150: 104489.     CrossRef
  • Commensal and Pathogenic Bacteria Indirectly Induce IL-22 but Not IFNγ Production From Human Colonic ILC3s via Multiple Mechanisms
    Moriah J. Castleman, Stephanie M. Dillon, Christine M. Purba, Andrew C. Cogswell, Jon J. Kibbie, Martin D. McCarter, Mario L. Santiago, Edward Barker, Cara C. Wilson
    Frontiers in Immunology.2019;[Epub]     CrossRef
  • Ursodeoxycholic acid: a promising therapeutic target for inflammatory bowel diseases?
    Stephen J. Keely, Clifford J. Steer, Natalia K. Lajczak-McGinley
    American Journal of Physiology-Gastrointestinal and Liver Physiology.2019; 317(6): G872.     CrossRef
  • Probiotics: If It Does Not Help It Does Not Do Any Harm. Really?
    Aaron Lerner, Yehuda Shoenfeld, Torsten Matthias
    Microorganisms.2019; 7(4): 104.     CrossRef
  • Linking the gut and liver: crosstalk between regulatory T cells and mucosa-associated invariant T cells
    Muhammad Atif, Suz Warner, Ye H. Oo
    Hepatology International.2018; 12(4): 305.     CrossRef
  • Gut microbiomes and their metabolites shape human and animal health
    Woojun Park
    Journal of Microbiology.2018; 56(3): 151.     CrossRef
  • Multispecies Probiotic Supplementation Favorably Affects Vascular Function and Reduces Arterial Stiffness in Obese Postmenopausal Women—A 12-Week Placebo-Controlled and Randomized Clinical Study
    Monika Szulińska, Igor Łoniewski, Katarzyna Skrypnik, Magdalena Sobieska, Katarzyna Korybalska, Joanna Suliburska, Paweł Bogdański
    Nutrients.2018; 10(11): 1672.     CrossRef
  • Update on the Gastrointestinal Microbiome in Systemic Sclerosis
    Chiara Bellocchi, Elizabeth R. Volkmann
    Current Rheumatology Reports.2018;[Epub]     CrossRef
  • Impact of Retinoic Acid on Immune Cells and Inflammatory Diseases
    Luana de Mendonça Oliveira, Franciane Mouradian Emidio Teixeira, Maria Notomi Sato
    Mediators of Inflammation.2018; 2018: 1.     CrossRef
  • Micronized Cells of the Probiotic Strain Bifidobacterium lactis BS01 Activate Monocyte Polarization
    Luca Mogna, Angela Amoruso, Marco Pane, Stefania Nicola, Serena Allesina, Francesca Deidda
    Journal of Clinical Gastroenterology.2018; 52(Supplement): S57.     CrossRef
[MINIREVIEW] Probiotics in human health and disease: from nutribiotics to pharmabiotics
Eun-Sook Lee , Eun-Ji Song , Young-Do Nam , So-Young Lee
J. Microbiol. 2018;56(11):773-782.   Published online October 24, 2018
DOI: https://doi.org/10.1007/s12275-018-8293-y
  • 384 View
  • 0 Download
  • 88 Crossref
AbstractAbstract PDF
Probiotics are the most useful tools for balancing the gut microbiota and thereby influencing human health and disease. Probiotics have a range of effects, from those on nutritional status to medical conditions throughout the body from the gut to non-intestinal body sites such as the brain and skin. Research interest in probiotics with nutritive claims (categorized as nutribiotics) has evolved into interest in therapeutic and pharmacological probiotics with health claims (pharmabiotics). The concept of pharmabiotics emerged only two decades ago, and the new categorization of probiotics to nutribiotics and pharmabiotics was recently suggested, which are under the different regulation depending on that they are food or drug. Information of the gut microbiome has been continuously accumulating, which will make possible the gut microbiome-based healthcare in the future, when nutribiotics show potential for maintaining health while pharmabiotics are effective therapeutic tools for human diseases. This review describes the current understanding in the conceptualization and classification of probiotics. Here, we reviewed probiotics as nutribiotics with nutritional functions and pharmabiotics with pharmaceutic functions in different diseases.

Citations

Citations to this article as recorded by  
  • The Therapeutic Effects of Probiotic on Systemic Lupus Erythematosus in Lupus Mice Models: A Systematic Review
    Rachael Chaeh-Wen Goh, Mari Kannan Maharajan, Divya Gopinath, Chee-Mun Fang
    Probiotics and Antimicrobial Proteins.2025; 17(1): 35.     CrossRef
  • Exploring the Multifaceted Therapeutic Potential of Probiotics: A Review of Current Insights and Applications
    Kashyapi Chakravarty, Smriti Gaur, Rohit Kumar, Niraj Kumar Jha, Piyush Kumar Gupta
    Probiotics and Antimicrobial Proteins.2025; 17(1): 341.     CrossRef
  • Unraveling the role of the gut microbiome in pregnancy disorders: insights and implications
    Yupei Xie, Qian Chen, Dan Shan, Xiongfei Pan, Yayi Hu
    Frontiers in Cellular and Infection Microbiology.2025;[Epub]     CrossRef
  • Exploring the Multitude: A Review on Different Categorization of Probiotics
    Raja Karukuvelraja, Natarajan Saranya
    Probiotics and Antimicrobial Proteins.2025;[Epub]     CrossRef
  • Microbiome-Based Products: Therapeutic Potential for Inflammatory Skin Diseases
    Anamarija Rušanac, Zara Škibola, Mario Matijašić, Hana Čipčić Paljetak, Mihaela Perić
    International Journal of Molecular Sciences.2025; 26(14): 6745.     CrossRef
  • Screening of Lactobacillus plantarum LPH10 and Its Anti-inflammatory Properties: Acid and Bile Salt Tolerance, Bacteriostatic Activity and Regulation of NF-κB/IRF Pathways
    Dan Xiong, Tao Sun, Mengru Liu, Bo Wang, Tianzhu Guan, Wenyuan Zhou, Zhenquan Yang
    Probiotics and Antimicrobial Proteins.2025;[Epub]     CrossRef
  • Skin microbiome and skin aging: emerging strategies for manipulation
    Zhiyan Wang, Fengming Yuan, Xuewei Zhong, Shi Feng, Tao Song
    Microbiological Research.2025; 300: 128285.     CrossRef
  • Evaluation of probiotic properties of a Brevibacillus laterosporus strain
    Yuheng Cao, Zhenhua Wang, Xixi Dai, Dongmei Zhang, Yan Zeng, Xueqin Ni, Kangcheng Pan
    The FASEB Journal.2024;[Epub]     CrossRef
  • Research progress on the regulation of oxidative stress by phenolics: the role of gut microbiota and Nrf2 signaling pathway
    Yanxia Liu, Xiaoling Wang, Natalia S. Podio, Xiaoyin Wang, Shuyan Xu, Suhang Jiang, Xia Wei, Yuna Han, Yunyan Cai, Xingyu Chen, Fan Jin, Xianbao Li, Er Sheng Gong
    Journal of the Science of Food and Agriculture.2024; 104(4): 1861.     CrossRef
  • Disturbance of the human gut microbiota in patients with Myotonic Dystrophy type 1
    Manijeh Mahdavi, Karine Prévost, Philippe Balthazar, Isabelle Fisette-Paul Hus, Élise Duchesne, Nicolas Dumont, Valérie Gagné-Ouellet, Cynthia Gagnon, Isabelle Laforest-Lapointe, Eric Massé
    Computational and Structural Biotechnology Journal.2024; 23: 2097.     CrossRef
  • Lactic acid bacteria reduce bacterial diarrhea in rabbits via enhancing immune function and restoring intestinal microbiota homeostasis
    Huimin Li, Chaoliang Leng, Nan Chen, Qinchao Ding, Yizhao Yuan, Yilei Zheng, Ge Zhu, Chen Chen, Lichang Xu, Jiangbing Shuai, Qinting Jiang, Daxi Ren, Huanan Wang
    BMC Veterinary Research.2024;[Epub]     CrossRef
  • Lipoteichoic Acid from Lacticaseibacillus rhamnosus GG as a Novel Intracanal Medicament Targeting Enterococcus faecalis Biofilm Formation
    Ji-Young Yoon, Somin Park, Dongwook Lee, Ok-Jin Park, WooCheol Lee, Seung Hyun Han
    Journal of Microbiology.2024; 62(10): 897.     CrossRef
  • Function and Application Status of Lactic Acid Bacteria in Intestinal Health
    元春 岳
    Hans Journal of Food and Nutrition Science.2024; 13(04): 429.     CrossRef
  • Impact of oligosaccharides on probiotic properties and B vitamins production: a comprehensive assessment of probiotic strains
    Jia Yin, Xiaoxia Peng, Aijun Yang, Mudi Lin, Kunfa Ji, Xiaohui Dai, Juan Huang, Li Li, Like Feng
    International Journal of Food Science and Technology.2024; 59(9): 6044.     CrossRef
  • ¿Cómo determinar si un yogurt tiene probióticos?
    Romany Yamileth Gonzalez Pacheco, Janet Hernández Terres, Nayeli Mendez Moran, Noemí Martínez Rendón, Angel Sebastián López Riveroll
    Scientific Journal Care & Tech.2024; 2(2): 39.     CrossRef
  • ПЕРЕРОБКА ХУРМИ (DIOSPYROS KAKI L.) СУШІННЯМ
    Жанна Олександрівна Петрова, Юлія Олександрівна Новікова, Катерина Сергіївна Слободянюк, Олексій Павлович Граков, Ігор Олегович Коваль
    Scientific Works.2024; 88(1): 19.     CrossRef
  • Complete genome analysis of Lactiplantibacillus plantarum VHProbi P06, a novel probiotic that resists Streptococcus pneumoniae in the upper respiratory tract
    Shudong Peng, Chaoqun Guo, Hongchang Cui, Zhi Duan
    International Journal of Biological Macromolecules.2023; 253: 127320.     CrossRef
  • Carbon dots labeled Lactiplantibacillus plantarum: a fluorescent multifunctional biocarrier for anticancer drug delivery
    Noor A. Abdullah, Hoda E. Mahmoud, Nefertiti A. El-Nikhely, Ahmed A. Hussein, Labiba K. El-Khordagui
    Frontiers in Bioengineering and Biotechnology.2023;[Epub]     CrossRef
  • Systemic multiomics evaluation of the therapeutic effect of Bacteroides species on liver cirrhosis in male mice
    Ye Rin Park, Hae Lee Lee, Ji Ye Hyun, Jieun Choi, Ji Hyun Moon, Byung Yong Kim, Seung-Jo Yang, Je Hee Lee, Byoung Kook Kim, Tae-Sik Park, Ki Tae Suk, Do Yup Lee, Heenam Stanley Kim
    Microbiology Spectrum.2023;[Epub]     CrossRef
  • Release of HMGB1 and Toll-like Receptors 2, 4, and 9 Signaling Are Modulated by Bifidobacterium animalis subsp. lactis BB-12 and Salmonella Typhimurium in a Gnotobiotic Piglet Model of Preterm Infants
    Igor Splichal, Sharon M. Donovan, Zdislava Kindlova, Zbynek Stranak, Vera Neuzil Bunesova, Marek Sinkora, Katerina Polakova, Barbora Valaskova, Alla Splichalova
    International Journal of Molecular Sciences.2023; 24(3): 2329.     CrossRef
  • Immunomodulatory effects of complex probiotics on the immuno-suppressed mice induced by cyclophosphamide
    Weiwei Ma, Wenwen Li, Shuang Yu, Hongsheng Bian, Yanyan Wang, Yang Jin, Zhenhua Zhang, Qing Ma, Lili Huang
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • From Kimchi to Kefir: An Exploration of Probiotics, Benefits, and Future
    Malak AbuZaid, Sook Sin Chan, Kit Wayne Chew, Atthasit Tawai, Pau Loke Show, M. Sriariyanun, Y.-S. Cheng, D. Bhattacharyya, P. Venkatachalam, M.P. Gundupalli
    E3S Web of Conferences.2023; 428: 02010.     CrossRef
  • Pickering emulsions for functional food systems
    James Cheon, Fatemah Haji, Jiyoo Baek, Qi Wang, Kam C. Tam
    Journal of Agriculture and Food Research.2023; 11: 100510.     CrossRef
  • The impact of antioxidant diets, nutraceuticals and physical activity interventions in the prevention of cardiometabolic diseases: An overview
    Neel Parekh, Vipina Merota, Ruchira Joshi, Ginpreet Kaur, Hardeep Tuli, Harpal Buttar
    Scripta Medica.2023; 54(4): 389.     CrossRef
  • Comprehensive in silico analysis of the probiotics, and preparation of compound probiotics-Polygonatum sibiricum saponin with hypoglycemic properties
    Jiayuan Luo, Lu Jiang, Bo Gao, Yangyang Chai, Yihong Bao
    Food Chemistry.2023; 404: 134569.     CrossRef
  • Polymeric carriers in probiotic delivery system
    Heenu Sharma, Swati Sharma, Jasveen Bajwa, Riya Chugh, Deepak Kumar
    Carbohydrate Polymer Technologies and Applications.2023; 5: 100301.     CrossRef
  • Characterization of a Potential Probiotic Lactiplantibacillus plantarum LRCC5310 by Comparative Genomic Analysis and its Vitamin B6 Production Ability
    Yunjeong Lee, Nattira Jaikwang, Seong keun Kim, Jiseon Jeong, Ampaitip Sukhoom, Jong-Hwa Kim, Wonyong Kim
    Journal of Microbiology and Biotechnology.2023; 33(5): 644.     CrossRef
  • Perspectives of Probiotics-based Cheese Research and Its Industrial Development
    Ju Young Eor, Jane Lee, Daye Mun, Younghoon Kim, Sangnam Oh
    Journal of Dairy Science and Biotechnology.2023; 41(4): 163.     CrossRef
  • Scope of bacterial surface effector molecules beyond probiotics
    Shalaka Bhawal, Ankita Kumari, Shikha Rana, Suman Kapila, Rajeev Kapila
    Food Bioscience.2023; 56: 103180.     CrossRef
  • Probiotics, as Adjuvant Therapy and Preventive Measure on Progression, and Complications of Head and Neck Cancer
    Carlos Enrique Galeana-Patiño, Mario Isidoro Ortiz, Raquel Cariño-Cortés, Iris Cristina López-Santillán, Javier Castro-Rosas, Carlos Alberto Gómez-Aldapa, Víctor Manuel Muñoz-Pérez
    Current Pharmaceutical Biotechnology.2023; 24(12): 1504.     CrossRef
  • Lactobacillus gasseri MG4247 and Lacticaseibacillus paracasei MG4272 and MG4577 Modulate Allergic Inflammatory Response in RAW 264.7 and RBL-2H3 cells
    Ji Yeon Lee, Ju-Hui Kang, Ye-Rin Jung, Chang-Ho Kang
    Probiotics and Antimicrobial Proteins.2023; 15(5): 1092.     CrossRef
  • Beyond probiotics: a narrative review on an era of revolution
    Neha Sharma, Dae-Kyung Kang, Hyun-Dong Paik, Young-Seo Park
    Food Science and Biotechnology.2023; 32(4): 413.     CrossRef
  • A systematic review on selection characterization and implementation of probiotics in human health
    Shreyasi Pramanik, Swethaa Venkatraman, Pothiyappan Karthik, Vinoth Kumar Vaidyanathan
    Food Science and Biotechnology.2023; 32(4): 423.     CrossRef
  • Clostridium butyricum potentially improves inflammation and immunity through alteration of the microbiota and metabolism of gastric cancer patients after gastrectomy
    Wenjie Cao, Cihua Zheng, Xuan Xu, Rui Jin, Feng Huang, Meng Shi, Zhipeng He, Yufeng Luo, Lulin Liu, Zhaoxia Liu, Jing Wei, Xiaorong Deng, Tingtao Chen
    Frontiers in Immunology.2022;[Epub]     CrossRef
  • Biodetoxification and Protective Properties of Probiotics
    Oana Lelia Pop, Ramona Suharoschi, Rosita Gabbianelli
    Microorganisms.2022; 10(7): 1278.     CrossRef
  • Therapeutic Effects of Gut Microbiota on Metabolic Syndrome: A Patent Review
    Shivani Singhal, Vibha Rani
    Recent Advances in Food, Nutrition & Agriculture.2022; 13(1): 17.     CrossRef
  • Lactobacilli: Legal Regulation and Prospects for New Generation Drugs
    R. A. Yunes, E. U. Poluektova, T. V. Belkina, V. N. Danilenko
    Applied Biochemistry and Microbiology.2022; 58(5): 652.     CrossRef
  • Pharmacomicrobiomics: Exploiting the Drug-Microbiota Interactions in Antihypertensive Treatment
    Hui-Qing Chen, Jin-Yu Gong, Kai Xing, Mou-Ze Liu, Huan Ren, Jian-Quan Luo
    Frontiers in Medicine.2022;[Epub]     CrossRef
  • Effect of probiotic supplementation on plasma metabolite profile after Roux-Y gastric bypass: a prospective, randomized, double-blind, placebo-controlled clinical trial
    Marília Rizzon Zaparolli Ramos, Ingrid Felicidade, Lígia de Oliveira Carlos, Nathalia Ramori Farinha Wagner, Mário Sérgio Mantovani, Luan Vitor Alves de Lima, Lúcia Regina Ribeiro, Thiago Inácio Barros Lopes, Fernanda Carla Henrique-Bana, João Vitor Zimme
    International Journal of Obesity.2022; 46(11): 2006.     CrossRef
  • Evaluation of the composition and quality of watermelon and mango juices fermented by Levilactobacillus brevis, Lacticaseibacillus casei and Pediococcus pentosaceus and subsequent simulated digestion and storage
    Juliana Mandha, Habtu Shumoy, Athanasia O. Matemu, Katleen Raes
    International Journal of Food Science & Technology.2022; 57(8): 5461.     CrossRef
  • Impact of gut microbiome on skin health: gut-skin axis observed through the lenses of therapeutics and skin diseases
    Md. Rayhan Mahmud, Sharmin Akter, Sanjida Khanam Tamanna, Lincon Mazumder, Israt Zahan Esti, Sanchita Banerjee, Sumona Akter, Md. Rakibul Hasan, Mrityunjoy Acharjee, Md. Sajjad Hossain, Anna Maria Pirttilä
    Gut Microbes.2022;[Epub]     CrossRef
  • Extracellular vesicle-mediated regulation of macrophage polarization in bacterial infections
    Mingjuan Qu, Hongwei Zhu, Xingxiao Zhang
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Lactobacillus Species as Probiotics: Isolation Sources and Health Benefits
    Ameera M. Al-Yami, Abeer T. Al-Mousa, Sarah A. Al-Otaibi, Ashraf Y. Khalifa
    Journal of Pure and Applied Microbiology.2022; 16(4): 2270.     CrossRef
  • Probiotics (Bacillus clausii and Lactobacillus fermentum NMCC-14) Ameliorate Stress Behavior in Mice by Increasing Monoamine Levels and mRNA Expression of Dopamine Receptors (D1 and D2) and Synaptophysin
    Mujeeb Ur Rehman, Shakira Ghazanfar, Rizwan Ul Haq, Shakir Ullah, Salman Khan, Jianbo Wu, Waqar Ahmad, Muhammad Khalid Tipu
    Frontiers in Pharmacology.2022;[Epub]     CrossRef
  • Postbiotics as potential new therapeutic agents for metabolic disorders management
    Yasmina Bourebaba, Krzysztof Marycz, Malwina Mularczyk, Lynda Bourebaba
    Biomedicine & Pharmacotherapy.2022; 153: 113138.     CrossRef
  • Intestinal microbiota dysbiosis in acute kidney injury: novel insights into mechanisms and promising therapeutic strategies
    Juan Lei, Yifan Xie, Jingyi Sheng, Jiayu Song
    Renal Failure.2022; 44(1): 571.     CrossRef
  • Probiotics: controversial issues
    V.A. Andreev, Olga U. Stetsiouk, Irina V. Andreeva
    Clinical Microbiology and Antimicrobial Chemotherapy.2022; 24(4): 345.     CrossRef
  • Bakterie Modyfikowane Genetycznie – Perspektywy Zastosowania w Profilaktyce, Diagnostyce I Terapii
    Barbara Macura, Aneta Kiecka, Marian Szczepanik
    Postępy Mikrobiologii - Advancements of Microbiology.2022; 61(1): 21.     CrossRef
  • Are Probiotics Needed in Nephrology?
    A. B. Kuznetzova, E. V. Prazdnova, V. A. Chistyakov, O. Yu. Kutsevalova, M. M. Batiushin
    Nephrology (Saint-Petersburg).2022; 26(4): 18.     CrossRef
  • Protective effect of Limosilactobacillus fermentum HFY06 on dextran sulfate sodium-induced colitis in mice
    Bihui Liu, Lei Yang, Ya Wu, Xin Zhao
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • A comprehensive review on phytochemistry, bioactivities, toxicity studies, and clinical studies on Ficus carica Linn. leaves
    Zhongyuan Li, Ying Yang, Miaomiao Liu, Chenghua Zhang, Junjing Shao, Xuewen Hou, Jingzhen Tian, Qinghua Cui
    Biomedicine & Pharmacotherapy.2021; 137: 111393.     CrossRef
  • Nanonutraceuticals: The New Frontier of Supplementary Food
    Donatella Paolino, Antonia Mancuso, Maria Chiara Cristiano, Francesca Froiio, Narimane Lammari, Christian Celia, Massimo Fresta
    Nanomaterials.2021; 11(3): 792.     CrossRef
  • Some characteristics of flavor of moromi vinegar fermented by a lactic acid bacterium and its effects on obesity
    Yuichi Nodake, Satomi Toda, Hitomi Iba, Tomonori Taira, Choryo Uema, Toki Taira
    Journal for the Integrated Study of Dietary Habits.2021; 31(4): 221.     CrossRef
  • Probiotics Alleviated Nonalcoholic Fatty Liver Disease in High-Fat Diet-Fed Rats via Gut Microbiota/FXR/FGF15 Signaling Pathway
    Minmin Luo, Junbin Yan, Liyan Wu, Jinting Wu, Zheng Chen, Jianping Jiang, Zhiyun Chen, Beihui He, Fabiano Carvalho
    Journal of Immunology Research.2021; 2021: 1.     CrossRef
  • Nutritional and Health Potential of Probiotics: A Review
    Muhammad Modassar Ali Nawaz Ranjha, Bakhtawar Shafique, Maria Batool, Przemysław Łukasz Kowalczewski, Qayyum Shehzad, Muhammad Usman, Muhammad Faisal Manzoor, Syeda Mahvish Zahra, Shazia Yaqub, Rana Muhammad Aadil
    Applied Sciences.2021; 11(23): 11204.     CrossRef
  • Foodomics: a new perspective on gut probiotics nutrition and health research
    Mengxue He, Chin Ping Tan, Yuanfa Liu, Yong-Jiang Xu
    Current Opinion in Food Science.2021; 41: 146.     CrossRef
  • Probiotics and MicroRNA: Their Roles in the Host–Microbe Interactions
    Ying Zhao, Yan Zeng, Dong Zeng, Hesong Wang, Mengjia Zhou, Ning Sun, Jinge Xin, Abdul Khalique, Danish Sharafat Rajput, Kangcheng Pan, Gang Shu, Bo Jing, Xueqin Ni
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Novel Insights for Metabiotics Production by Using Artisanal Probiotic Cultures
    Marina Pihurov, Bogdan Păcularu-Burada, Mihaela Cotârleţ, Mihaela Aida Vasile, Gabriela Elena Bahrim
    Microorganisms.2021; 9(11): 2184.     CrossRef
  • Pediococcus pentosaceus, a future additive or probiotic candidate
    Shiman Jiang, Lingzhi Cai, Longxian Lv, Lanjuan Li
    Microbial Cell Factories.2021;[Epub]     CrossRef
  • DW2009 Elevates the Efficacy of Donepezil against Cognitive Impairment in Mice
    Dong-Yun Lee, Jeon-Kyung Kim, Soo-Won Yun, Myung Joo Han, Dong-Hyun Kim
    Nutrients.2021; 13(9): 3273.     CrossRef
  • Effect of a Nutritionally Balanced Diet Comprising Whole Grains and Vegetables Alone or in Combination with Probiotic Supplementation on the Gut Microbiota
    Young Joo Oh, Kisun Nam, Yanghee Kim, Seo Yeon Lee, Hyung Sook Kim, Jung Il Kang, Sang Yun Lee, Keum Taek Hwang
    Preventive Nutrition and Food Science.2021; 26(2): 121.     CrossRef
  • The skin microbiome and the gut-skin axis
    Shivani Sinha, Gloria Lin, Katalin Ferenczi
    Clinics in Dermatology.2021; 39(5): 829.     CrossRef
  • Lactiplantibacillus plantarum LRCC5314 includes a gene for serotonin biosynthesis via the tryptophan metabolic pathway
    Jiseon Jeong, Yunjeong Lee, Seokmin Yoon, Jong-Hwa Kim, Wonyong Kim
    Journal of Microbiology.2021; 59(12): 1092.     CrossRef
  • Next-Generation Probiotics and Their Metabolites in COVID-19
    Thomas Gautier, Sandrine David-Le Gall, Alaa Sweidan, Zohreh Tamanai-Shacoori, Anne Jolivet-Gougeon, Olivier Loréal, Latifa Bousarghin
    Microorganisms.2021; 9(5): 941.     CrossRef
  • Effects of Lactobacillus acidophilus NCFM and Bifidobacterium lactis Bi-07 Supplementation on Nutritional and Metabolic Parameters in the Early Postoperative Period after Roux-en-Y Gastric Bypass: a Randomized, Double-Blind, Placebo-Controlled Trial
    Marília Rizzon Zaparolli Ramos, Lígia de Oliveira Carlos, Nathalia Ramori Farinha Wagner, Ingrid Felicidade, Magda Ramos da Cruz, Cesar Augusto Taconeli, Ricardo Fernandes, Alcides José Branco Filho, Antônio Carlos Ligocki Campos
    Obesity Surgery.2021; 31(5): 2105.     CrossRef
  • The Regulation of Host Intestinal Microbiota by Polyphenols in the Development and Prevention of Chronic Kidney Disease
    Naren Bao, Fangjie Chen, Di Dai
    Frontiers in Immunology.2020;[Epub]     CrossRef
  • Vitamin D Modulates Intestinal Microbiota in Inflammatory Bowel Diseases
    Carolina Battistini, Rafael Ballan, Marcos Edgar Herkenhoff, Susana Marta Isay Saad, Jun Sun
    International Journal of Molecular Sciences.2020; 22(1): 362.     CrossRef
  • Effects of Probiotics on Patients with Hypertension: a Systematic Review and Meta-analysis
    Cheng Chi, Cheng Li, Dongjun Wu, Nicholas Buys, Wenjun Wang, Huimin Fan, Jing Sun
    Current Hypertension Reports.2020;[Epub]     CrossRef
  • Data on global analysis of clinical trials with probiotics
    Theresia M.G. Dronkers, Arthur C. Ouwehand, Ger T. Rijkers
    Data in Brief.2020; 32: 106269.     CrossRef
  • Lactobacillus acidophilus LB: a useful pharmabiotic for the treatment of digestive disorders
    José María Remes-Troche, Enrique Coss-Adame, Miguel Ángel Valdovinos-Díaz, Octavio Gómez-Escudero, María Eugenia Icaza-Chávez, José Antonio Chávez-Barrera, Flora Zárate-Mondragón, José Antonio Velarde-Ruíz Velasco, Guillermo Rafael Aceves-Tavares, Marco A
    Therapeutic Advances in Gastroenterology.2020;[Epub]     CrossRef
  • Postbiotics against Pathogens Commonly Involved in Pediatric Infectious Diseases
    Anastasia Mantziari, Seppo Salminen, Hania Szajewska, Jeadran Nevardo Malagón-Rojas
    Microorganisms.2020; 8(10): 1510.     CrossRef
  • Taxon-Specific Effects of Lactobacillus on Drosophila Host Development
    Jaegeun Lee, Gangsik Han, Jae Woon Kim, Che Ok Jeon, Seogang Hyun
    Microbial Ecology.2020; 79(1): 241.     CrossRef
  • Probiotic Escherichia coli Nissle 1917-derived outer membrane vesicles enhance immunomodulation and antimicrobial activity in RAW264.7 macrophages
    Rujiu Hu, Hua Lin, Jing Li, Yuezhen Zhao, Mimi Wang, Xiaoqin Sun, Yuna Min, Yupeng Gao, Mingming Yang
    BMC Microbiology.2020;[Epub]     CrossRef
  • Beneficial Regulatory Effects of Polymethoxyflavone—Rich Fraction from Ougan (Citrus reticulata cv. Suavissima) Fruit on Gut Microbiota and Identification of Its Intestinal Metabolites in Mice
    Jiebiao Chen, Yue Wang, Tailin Zhu, Sijia Yang, Jinping Cao, Xian Li, Li-Shu Wang, Chongde Sun
    Antioxidants.2020; 9(9): 831.     CrossRef
  • Lactobacillus helveticus-Fermented Milk Whey Suppresses Melanin Production by Inhibiting Tyrosinase through Decreasing MITF Expression
    Nobutomo Ikarashi, Natsuko Fukuda, Makiba Ochiai, Mami Sasaki, Risako Kon, Hiroyasu Sakai, Misaki Hatanaka, Junzo Kamei
    Nutrients.2020; 12(7): 2082.     CrossRef
  • Engineering probiotics as living diagnostics and therapeutics for improving human health
    Zhao Zhou, Xin Chen, Huakang Sheng, Xiaolin Shen, Xinxiao Sun, Yajun Yan, Jia Wang, Qipeng Yuan
    Microbial Cell Factories.2020;[Epub]     CrossRef
  • Lactobacillus Cell Surface Proteins Involved in Interaction with Mucus and Extracellular Matrix Components
    Lidia Muscariello, Barbara De Siena, Rosangela Marasco
    Current Microbiology.2020; 77(12): 3831.     CrossRef
  • Directed mutation of β-glucanases from probiotics to enhance enzymatic activity, thermal and pH stability
    Zhan-Bin Sun, Jia-Liang Xu, Xin Lu, Wei Zhang, Chao Ji, Qing Ren
    Archives of Microbiology.2020; 202(7): 1749.     CrossRef
  • Role of Gut Microbiota in Neuroendocrine Regulation of Carbohydrate and Lipid Metabolism via the Microbiota-Gut-Brain-Liver Axis
    Shu-Zhi Wang, Yi-Jing Yu, Khosrow Adeli
    Microorganisms.2020; 8(4): 527.     CrossRef
  • Lactic Acid Bacteria Isolated From Korean Kimchi Activate the Vitamin D Receptor–autophagy Signaling Pathways
    Rong Lu, Mei Shang, Yong-Guo Zhang, Yang Jiao, Yinglin Xia, Shari Garrett, Danika Bakke, Christine Bäuerl, Gaspar Perez Martinez, Cheol-Hyun Kim, Sang-Moo Kang, Jun Sun
    Inflammatory Bowel Diseases.2020; 26(8): 1199.     CrossRef
  • Influence of freezing temperature before freeze-drying on the viability of various Lactobacillus plantarum strains
    Guang-Qiang Wang, Jing Pu, Xiao-Qing Yu, Yong-Jun Xia, Lian-Zhong Ai
    Journal of Dairy Science.2020; 103(4): 3066.     CrossRef
  • The Influence of Polyphenol Compounds on Human Gastrointestinal Tract Microbiota
    Michał Wiciński, Jakub Gębalski, Ewelina Mazurek, Marta Podhorecka, Maciej Śniegocki, Paweł Szychta, Ewelina Sawicka, Bartosz Malinowski
    Nutrients.2020; 12(2): 350.     CrossRef
  • Protective effects of exopolysaccharide of a medicinal fungus on probiotic bacteria during cold storage and simulated gastrointestinal conditions
    Ang-Xin Song, Yu-Heng Mao, Ka-Chai Siu, William Chi Shing Tai, Jian-Yong Wu
    International Journal of Biological Macromolecules.2019; 133: 957.     CrossRef
  • Anti-TGEV Miller Strain Infection Effect of Lactobacillus plantarum Supernatant Based on the JAK-STAT1 Signaling Pathway
    Kai Wang, Ling Ran, Tao Yan, Zheng Niu, Zifei Kan, Yiling Zhang, Yang Yang, Luyi Xie, Shilei Huang, Qiuhan Yu, Di Wu, Zhenhui Song
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Research progress of gut flora in improving human wellness
    Chenggang Zhang, Wenjing Gong, Zhihui Li, Dawen Gao, Yan Gao
    Food Science and Human Wellness.2019; 8(2): 102.     CrossRef
  • In Vitro Methods to Study Colon Release: State of the Art and An Outlook on New Strategies for Better In-Vitro Biorelevant Release Media
    Marie Wahlgren, Magdalena Axenstrand, Åsa Håkansson, Ali Marefati, Betty Lomstein Pedersen
    Pharmaceutics.2019; 11(2): 95.     CrossRef
  • Bifidobacterium longum and Lactobacillus plantarum alleviate house dust mite allergen-induced allergic rhinitis by regulating IL-4, IL-5, and IL-10 expression
    Jeon-Kyung Kim, Jae-Young Kim, Hye In Kim, Myung Joo Han, Dong-Hyun Kim
    Food and Agricultural Immunology.2019; 30(1): 581.     CrossRef
  • Probiotics: If It Does Not Help It Does Not Do Any Harm. Really?
    Aaron Lerner, Yehuda Shoenfeld, Torsten Matthias
    Microorganisms.2019; 7(4): 104.     CrossRef
Journal Article
Inhibitory effects of bee venom and its components against viruses in vitro and in vivo
Md Bashir Uddin , Byeong-Hoon Lee , Chamilani Nikapitiya , Jae-Hoon Kim , Tae-Hwan Kim , Hyun-Cheol Lee , Choul Goo Kim , Jong-Soo Lee , Chul-Joong Kim
J. Microbiol. 2016;54(12):853-866.   Published online November 26, 2016
DOI: https://doi.org/10.1007/s12275-016-6376-1
  • 418 View
  • 0 Download
  • 88 Crossref
AbstractAbstract PDF
Bee venom (BV) from honey bee (Apis Melifera L.) contains at least 18 pharmacologically active components including melittin (MLT), phospholipase A2 (PLA2), and apamin etc. BV is safe for human treatments dose dependently and proven to possess different healing properties including antibacterial and antiparasitidal properties. Nevertheless, antiviral properties of BV have not well investigated. Hence, we identified the potential antiviral properties of BV and its component against a broad panel of viruses. Co-incubation of non-cytotoxic amounts of BV and MLT, the main component of BV, significantly inhibited the replication of enveloped viruses such as Influenza A virus (PR8), Vesicular Stomatitis Virus (VSV), Respiratory Syncytial Virus (RSV), and Herpes Simplex Virus (HSV). Additionally, BV and MLT also inhibited the replication of non-enveloped viruses such as Enterovirus-71 (EV-71) and Coxsackie Virus (H3). Such antiviral properties were mainly explained by virucidal mechanism. Moreover, MLT protected mice which were challenged with lethal doses of pathogenic influenza A H1N1 viruses. Therefore, these results provides the evidence that BV and MLT could be a potential source as a promising antiviral agent, especially to develop as a broad spectrum antiviral agent.

Citations

Citations to this article as recorded by  
  • Potential of Venom-Derived Compounds for the Development of New Antimicrobial Agents
    Esraa Yasser Rabea, Esraa Dakrory Mahmoud, Nada Khaled Mohamed, Erada Rabea Ansary, Mahmoud Roushdy Alrouby, Rabab Reda Shehata, Youssef Yasser Mokhtar, Prakash Arullampalam, Ahmed M. Hegazy, Ahmed Al-Sabi, Tarek Mohamed Abd El-Aziz
    Toxins.2025; 17(5): 238.     CrossRef
  • Bothropstoxins I and II as potent phospholipase A2 molecules from Bothrops jararacussu to impair hepatitis C virus infection
    Carina Machado Pereira, Jacqueline Farinha Shimizu, Natasha Marques Cassani, Igor Andrade Santos, Cintia Bittar, Adélia Cristina Oliveira Cintra, Suely Vilela Sampaio, Mark Harris, Paula Rahal, Ana Carolina Gomes Jardim
    Biochimie.2025; 235: 39.     CrossRef
  • Recent Advances in Therapeutic Peptides: Innovations and Applications in Treating Infections and Diseases
    Deepshikha Sharma, Isha Dhiman, Swarnali Das, Deepak Kumar Das, Devlina Das Pramanik, Sandeep Kumar Dash, Arindam Pramanik
    ACS Omega.2025; 10(17): 17087.     CrossRef
  • Bee products as alternatives in the treatment of viral infections
    Michał Otręba, Łukasz Marek, Jerzy Stojko, Anna Rzepecka‐Stojko
    Journal of the Science of Food and Agriculture.2025;[Epub]     CrossRef
  • Advancements in antiviral approaches against foot-and-mouth disease virus: a comprehensive review
    Mahmoud Mohamadin, Rashid Manzoor, Ahmed Elolimy, Mohamed Abdelmegeid, Samah Mosad, Sahar Abd El Rahman
    Frontiers in Veterinary Science.2025;[Epub]     CrossRef
  • CAPRİPOXVİRUSLARIN HAYVAN SAĞLIĞI ÜZERİNDEKİ ETKİLERİ VE GÜNCEL ANTİVİRAL YAKLAŞIMLAR
    Sibel Şurak, Zeynep Akkutay Yoldar
    Veteriner Farmakoloji ve Toksikoloji Derneği Bülteni.2024; 15(2): 86.     CrossRef
  • Mechanisms of Action, Biological Characteristics, and Future Prospects: A Review of Antimicrobial Peptides (A Review)
    X. Ma, Z. Chen, M. Long
    Applied Biochemistry and Microbiology.2024; 60(6): 1044.     CrossRef
  • Structural characterization and bioactivity profiling of the fungal peptaibiotic tolypin reveal protective effects against influenza viruses
    Johanna Eichberg, Markus Oberpaul, Christoph Hartwig, Andrea Helga Geißler, Carsten Culmsee, Andreas Vilcinskas, Eva Böttcher‐Friebertshäuser, Hans Brückner, Thomas Degenkolb, Kornelia Hardes
    Archiv der Pharmazie.2024;[Epub]     CrossRef
  • Antiviral Activities of Mastoparan-L-Derived Peptides against Human Alphaherpesvirus 1
    Liana Costa Pereira Vilas Boas, Danieli Fernanda Buccini, Rhayfa Lorrayne Araújo Berlanda, Bruno de Paula Oliveira Santos, Mariana Rocha Maximiano, Luciano Morais Lião, Sónia Gonçalves, Nuno C. Santos, Octávio Luiz Franco
    Viruses.2024; 16(6): 948.     CrossRef
  • Anti-Herpes Simplex Virus and Anti-Inflammatory Activities of the Melittin Peptides Derived from Apis mellifera and Apis florea Venom
    Pichet Praphawilai, Thida Kaewkod, Sureeporn Suriyaprom, Aussara Panya, Terd Disayathanoowat, Yingmanee Tragoolpua
    Insects.2024; 15(2): 109.     CrossRef
  • Melittin as a therapeutic agent for rheumatoid arthritis: mechanistic insights, advanced delivery systems, and future perspectives
    Ashutosh Pareek, Khushbu Mehlawat, Kritika Tripathi, Aaushi Pareek, Simran Chaudhary, Yashumati Ratan, Vasso Apostolopoulos, Anil Chuturgoon
    Frontiers in Immunology.2024;[Epub]     CrossRef
  • A Journey Along the Boulevard of Bioactive Compounds from Natural Sources, with Cosmetic and Pharmaceutical Potential: Bee Venom, Cobra Venom, Ficus carica
    Monica Dinu, Carmen Galea, Ana Maria Chirilov, Alin Laurențiu Tatu, Lawrence Chukwudi Nwabudike, Olimpia Dumitriu Buzia, Claudia Simona Stefan
    Cosmetics.2024; 11(6): 195.     CrossRef
  • Bee-Inspired Healing: Apitherapy in Veterinary Medicine for Maintenance and Improvement Animal Health and Well-Being
    Jevrosima Stevanović, Uroš Glavinić, Marko Ristanić, Vladimira Erjavec, Barış Denk, Slobodan Dolašević, Zoran Stanimirović
    Pharmaceuticals.2024; 17(8): 1050.     CrossRef
  • The current landscape of the antimicrobial peptide melittin and its therapeutic potential
    Hai-Qian Zhang, Chengbiao Sun, Na Xu, Wensen Liu
    Frontiers in Immunology.2024;[Epub]     CrossRef
  • Immunomodulatory activities and biomedical applications of melittin and its recent advances
    Zohreh Jafari, Sahar Sadeghi, Mahsa Mirzarazi Dehaghi, Ashkan Bigham, Shokouh Honarmand, Afsaneh Tavasoli, Mostafa Haji Molla Hoseini, Rajender S. Varma
    Archiv der Pharmazie.2024;[Epub]     CrossRef
  • Bee venom and melittin: Potent key enzyme inhibitors with promising therapeutic potential
    Bayram Alparslan, Murat Şentürk, Cengiz Erkan
    Toxicon.2024; 252: 108164.     CrossRef
  • Expression profiles and phylogenetic properties of venom gland‐specific viruses in some aculeate bees and wasps
    Kyungjae Andrew Yoon, Woo Jin Kim, Hee Jong Shin, Si Hyeock Lee
    Entomological Research.2024;[Epub]     CrossRef
  • DOĞANIN ŞİFASI: ARI ZEHRİNİN SAĞLIK ÜZERİNDEKİ ETKİLERİ VE UYGULAMALARI
    Sibel Kaymak, Nilüfer Vural, Oğuz Yüce, Salih Mollahaliloğlu
    Uludağ Arıcılık Dergisi.2024; 24(2): 386.     CrossRef
  • Plantar warts successfully treated with bee venom: A case report
    Min Hee Kim
    EXPLORE.2024; 20(2): 231.     CrossRef
  • Bee venom: apitherapy and more
    Maya JODIDIO, Robert A. SCHWARTZ
    Italian Journal of Dermatology and Venereology.2024;[Epub]     CrossRef
  • Harnessing the power of bee venom for therapeutic and regenerative medical applications: an updated review
    Kadry M. Sadek, Naira A. Shib, Ehab S. Taher, Fatema Rashed, Mustafa Shukry, Gamal A. Atia, Noha Taymour, Mohammad El-Nablaway, Ateya M. Ibrahim, Mahmoud M. Ramadan, Afaf Abdelkader, Mohamed Abdo, Ilinca Imbrea, Elena Pet, Lashin S. Ali, Ahmed Abdeen
    Frontiers in Pharmacology.2024;[Epub]     CrossRef
  • Cytotoxic and apoptotic effectiveness of Cypriot honeybee (Apis mellifera cypria) venom on various cancer cells
    Ayşe Nalbantsoy, Ekin Varol, Ayşe Dila Çaglar, Banu Yücel
    Turkish Journal of Biochemistry.2024; 49(3): 446.     CrossRef
  • Orchestrating AMPK/mTOR signaling to initiate melittin-induced mitophagy: A neuroprotective strategy against Parkinson's disease
    Mingran Chen, Xue Wang, Shuangyan Bao, Dexiao Wang, Jie Zhao, Qian Wang, Chaojie Liu, Haiong Zhao, Chenggui Zhang
    International Journal of Biological Macromolecules.2024; 281: 136119.     CrossRef
  • Bee Venom and Its Therapeutic Uses
    Hassan Morovvati, Haydeh Keyhan, Mohammad Kazem Koohi, Jalal Hassan
    Journal of Apitherapy and Nature.2024; 7(2): 65.     CrossRef
  • A potential antifungal bioproduct for Microsporum canis: Bee venom
    Armağan E. Ütük, Tülin Güven Gökmen, Hatice Yazgan, Funda Eşki, Nevin Turut, Şifa Karahan, İbrahim Kıvrak, Sedat Sevin, Osman Sezer
    Onderstepoort Journal of Veterinary Research.2024;[Epub]     CrossRef
  • Insights into enterovirus a-71 antiviral development: from natural sources to synthetic nanoparticles
    Shiraz Feferbaum-Leite, Igor Andrade Santos, Victória Riquena Grosche, Gislaine Celestino Dutra da Silva, Ana Carolina Gomes Jardim
    Archives of Microbiology.2023;[Epub]     CrossRef
  • Can Bee Venom Be Used as Anticancer Agent in Modern Medicine?
    Agata Małek, Maciej Strzemski, Joanna Kurzepa, Jacek Kurzepa
    Cancers.2023; 15(14): 3714.     CrossRef
  • Bee Venom Induces the Interaction between Phosphorylated Histone Variant, H2AX, and the Intracellular Site of beta‐Actin in Liver and Breast Cancer Cells
    Sinan Tetikoğlu, Selcen Çelik‐Uzuner
    Chemistry & Biodiversity.2023;[Epub]     CrossRef
  • In-Ovo injection of melittin into Alexandria chicken eggs: a way for early immune acceleration
    Mohamed H. Khalil, Saber S. Hassan, Farid N. K. Soliman, Mohamed I. Hassan
    Animal Biotechnology.2023; : 1.     CrossRef
  • Determination of the Effects of Bee Venom on Triple Negative Breast Cancer Cells in Vitro
    Sedat Sevin, Asuman Deveci Ozkan, Hidayet Tutun, Ibrahim Kivrak, Ozge Turna, Gamze Guney Eskiler
    Chemistry & Biodiversity.2023;[Epub]     CrossRef
  • Experimental envenomation with honeybee venom melittin and phospholipase A2 induced multiple ultrastructural changes in adrenocortical mitochondria
    Diana Harfmann, Adrian Florea
    Toxicon.2023; 229: 107136.     CrossRef
  • Bee Venom and Its Two Main Components—Melittin and Phospholipase A2—As Promising Antiviral Drug Candidates
    Carole Yaacoub, Rim Wehbe, Rabih Roufayel, Ziad Fajloun, Bruno Coutard
    Pathogens.2023; 12(11): 1354.     CrossRef
  • Synthesis of bee venom loaded chitosan nanoparticles for anti-MERS-COV and multi-drug resistance bacteria
    Mohamed E. Elnosary, Hesham A. Aboelmagd, Manal A. Habaka, Salem R. Salem, Mehrez E. El-Naggar
    International Journal of Biological Macromolecules.2023; 224: 871.     CrossRef
  • Melittin-Related Peptides Interfere with Sandfly Fever Naples Virus Infection by Interacting with Heparan Sulphate
    Annalisa Chianese, Carla Zannella, Francesca Palma, Laura Di Clemente, Alessandra Monti, Nunzianna Doti, Anna De Filippis, Massimiliano Galdiero
    Microorganisms.2023; 11(10): 2446.     CrossRef
  • Therapeutic Use of Bee Venom and Potential Applications in Veterinary Medicine
    Roberto Bava, Fabio Castagna, Vincenzo Musella, Carmine Lupia, Ernesto Palma, Domenico Britti
    Veterinary Sciences.2023; 10(2): 119.     CrossRef
  • Antiviral Attributes of Bee Venom as a Possible Therapeutic Approach Against SARS-CoV-2 Infection
    Soumik Goswami, Jayita Pal Chowdhury
    Future Virology.2023; 18(15): 1021.     CrossRef
  • Antimicrobial Activity of Apis mellifera Bee Venom Collected in Northern Peru
    Orlando Pérez-Delgado, Abraham Omar Espinoza-Culupú, Elmer López-López
    Antibiotics.2023; 12(4): 779.     CrossRef
  • General Nutritional Profile of Bee Products and Their Potential Antiviral Properties against Mammalian Viruses
    Syeda Tasmia Asma, Otilia Bobiş, Victoriţa Bonta, Ulas Acaroz, Syed Rizwan Ali Shah, Fatih Ramazan Istanbullugil, Damla Arslan-Acaroz
    Nutrients.2022; 14(17): 3579.     CrossRef
  • THERAPEUTICS APPROACHES OF INVERTEBRATE ANIMAL TOXINS: A REVIEW
    SIMRAN SHARMA, RAVI KANT UPADHYAY
    International Journal of Pharmacy and Pharmaceutical Sciences.2022; : 8.     CrossRef
  • In Silico Analysis of Honeybee Venom Protein Interaction with Wild Type and Mutant (A82V + P375S) Ebola Virus Spike Protein
    Muhammad Muzammal, Muzammil Khan, Mohammed Mohaini, Abdulkhaliq Alsalman, Maitham Hawaj, Arshad Farid
    Biologics.2022; 2(1): 45.     CrossRef
  • Antiviral Effects of Animal Toxins: Is There a Way to Drugs?
    Yuri Utkin, Andrei Siniavin, Igor Kasheverov, Victor Tsetlin
    International Journal of Molecular Sciences.2022; 23(7): 3634.     CrossRef
  • Antiviral Activity of Bee Products
    Theodoros Kontogiannis, Tilemachos G. Dimitriou, Nikos Asoutis Didaras, Dimitris Mossialos
    Current Pharmaceutical Design.2022; 28(35): 2867.     CrossRef
  • Animal venoms as a source of antiviral peptides active against arboviruses: a systematic review
    William Gustavo Lima, César Quadros Maia, Thayane Santos de Carvalho, Gustavo Oliveira Leite, Júlio César Moreira Brito, Isabella Piassi Dias Godói, Maria Elena de Lima, Jaqueline Maria Siqueira Ferreira
    Archives of Virology.2022; 167(9): 1763.     CrossRef
  • Reptiles as Promising Sources of Medicinal Natural Products for Cancer Therapeutic Drugs
    Soon Yong Park, Hyeongrok Choi, Jin Woong Chung
    Pharmaceutics.2022; 14(4): 874.     CrossRef
  • Antiviral Potential of Natural Resources against Influenza Virus Infections
    Johanna Eichberg, Elena Maiworm, Markus Oberpaul, Volker Czudai-Matwich, Tim Lüddecke, Andreas Vilcinskas, Kornelia Hardes
    Viruses.2022; 14(11): 2452.     CrossRef
  • Effect of honey bee venom on the histological changes of testes and hormonal disturbance in diabetic mice
    Sattar J. J. AL-Shaeli, Talal Jabal Hussen, Ali M. Ethaeb
    Veterinary World.2022; : 2357.     CrossRef
  • Gramicidin S and melittin: potential anti-viral therapeutic peptides to treat SARS-CoV-2 infection
    Mohammed Ghalib Enayathullah, Yash Parekh, Sarena Banu, Sushma Ram, Ramakrishnan Nagaraj, Bokara Kiran Kumar, Mohammed M. Idris
    Scientific Reports.2022;[Epub]     CrossRef
  • Anti-fungal Effects and Mechanisms of Action of Wasp Venom-Derived Peptide Mastoparan-VT1 Against Candida albicans
    Mojtaba Memariani, Hamed Memariani, Zahra Poursafavi, Zohre Baseri
    International Journal of Peptide Research and Therapeutics.2022;[Epub]     CrossRef
  • Melittin-Based Nano-Delivery Systems for Cancer Therapy
    Anqi Wang, Yuan Zheng, Wanxin Zhu, Liuxin Yang, Yang Yang, Jinliang Peng
    Biomolecules.2022; 12(1): 118.     CrossRef
  • New Insights into Potential Beneficial Effects of Bioactive Compounds of Bee Products in Boosting Immunity to Fight COVID-19 Pandemic: Focus on Zinc and Polyphenols
    Meryem Bakour, Hassan Laaroussi, Driss Ousaaid, Asmae El Ghouizi, Imane Es-safi, Hamza Mechchate, Badiaa Lyoussi
    Nutrients.2022; 14(5): 942.     CrossRef
  • COVID-19 pandemic: impacts on bees, beekeeping, and potential role of bee products as antiviral agents and immune enhancers
    Youssef A. Attia, Gianpaolo M. Giorgio, Nicola F. Addeo, Khalid A. Asiry, Giovanni Piccolo, Antonino Nizza, Carmelo Di Meo, Naimah A. Alanazi, Adel D. Al-qurashi, Mohamed E. Abd El-Hack, Asmaa F. Khafaga, Fulvia Bovera
    Environmental Science and Pollution Research.2022; 29(7): 9592.     CrossRef
  • The Broad-Spectrum Antiviral Potential of the Amphibian Peptide AR-23
    Annalisa Chianese, Carla Zannella, Alessandra Monti, Anna De Filippis, Nunzianna Doti, Gianluigi Franci, Massimiliano Galdiero
    International Journal of Molecular Sciences.2022; 23(2): 883.     CrossRef
  • Pharmaceutical Prospects of Bee Products: Special Focus on Anticancer, Antibacterial, Antiviral, and Antiparasitic Properties
    Firzan Nainu, Ayu Masyita, Muh. Akbar Bahar, Muhammad Raihan, Shajuthi Rahman Prova, Saikat Mitra, Talha Bin Emran, Jesus Simal-Gandara
    Antibiotics.2021; 10(7): 822.     CrossRef
  • Bee Venom: From Venom to Drug
    Abdelwahab Khalil, Basem H. Elesawy, Tarek M. Ali, Osama M. Ahmed
    Molecules.2021; 26(16): 4941.     CrossRef
  • The Responsiveness of Bee Venom Phospholipase A2 on Regulatory T Cells Correlates with the CD11c+CD206+Population in Human Peripheral Blood Mononuclear Cells
    Heejin Jo, Hyunjung Baek, Seon-Young Park, Bonhyuk Goo, Woo-Sang Jung, Hyunsu Bae, Sang-Soo Nam
    Toxins.2021; 13(10): 717.     CrossRef
  • Antiviral peptides against Enterovirus A71 causing hand, foot and mouth disease
    Salima Lalani, Lai Ti Gew, Chit Laa Poh
    Peptides.2021; 136: 170443.     CrossRef
  • Mechanism of antimicrobial activity of honeybee (Apis mellifera) venom on Gram-negative bacteria: Escherichia coli and Pseudomonas spp.
    Izlem Haktanir, Maria Masoura, Fani Th Mantzouridou, Konstantinos Gkatzionis
    AMB Express.2021;[Epub]     CrossRef
  • Applications and evolution of melittin, the quintessential membrane active peptide
    Shantanu Guha, Ryan P. Ferrie, Jenisha Ghimire, Cristina R. Ventura, Eric Wu, Leisheng Sun, Sarah Y. Kim, Gregory R. Wiedman, Kalina Hristova, Wimley C. Wimley
    Biochemical Pharmacology.2021; 193: 114769.     CrossRef
  • Naturally-derived targeted therapy for wound healing: Beyond classical strategies
    Saeed El-Ashram, Lamia M. El-Samad, Amal A. Basha, Abeer El Wakil
    Pharmacological Research.2021; 170: 105749.     CrossRef
  • Antimicrobial peptides as promising drugs for treatment of primary viral pneumonia
    M. Yu. Shchelkanov, A. V. Cybulsky, V. G. Dedkov, I. V. Galkina, V. V. Maleev
    Russian Journal of Infection and Immunity.2021; 11(5): 837.     CrossRef
  • Repurposing of Sitagliptin- Melittin Optimized Nanoformula against SARS-CoV-2; Antiviral Screening and Molecular Docking Studies
    Mohammed Al-Rabia, Nabil Alhakamy, Osama Ahmed, Khalid Eljaaly, Ahmed Alaofi, Ahmed Mostafa, Hani Asfour, Ahmed Aldarmahi, Khaled Darwish, Tarek Ibrahim, Usama Fahmy
    Pharmaceutics.2021; 13(3): 307.     CrossRef
  • Fighting against the second wave of COVID-19: Can honeybee products help protect against the pandemic?
    Yahya Al Naggar, John P. Giesy, Mohamed M. Abdel-Daim, Mohammad Javed Ansari, Saad N. Al-Kahtani, Galal Yahya
    Saudi Journal of Biological Sciences.2021; 28(3): 1519.     CrossRef
  • Bee products as a source of promising therapeutic and chemoprophylaxis strategies against COVID‐19 (SARS‐CoV‐2)
    William G. Lima, Júlio C. M. Brito, Waleska S. da Cruz Nizer
    Phytotherapy Research.2021; 35(2): 743.     CrossRef
  • Stable Loading and Delivery of Melittin with Lipid-Coated Polymeric Nanoparticles for Effective Tumor Therapy with Negligible Systemic Toxicity
    Ran Ye, Yuan Zheng, Yang Chen, Xiaohui Wei, Sanyuan Shi, Yuetan Chen, Wanxin Zhu, Anqi Wang, Liuxin Yang, Yuhong Xu, Jinliang Peng
    ACS Applied Materials & Interfaces.2021; 13(47): 55902.     CrossRef
  • Cytotoxic Effect of Bee (A. mellifera) Venom on Cancer Cell Lines
    Sima Khalilifard Borojeni, Hossein Zolfagharian, Mahdi Babaie, Iraj Javadi
    Journal of Pharmacopuncture.2020; 23(4): 212.     CrossRef
  • Bee Venom in Wound Healing
    Anna Kurek-Górecka, Katarzyna Komosinska-Vassev, Anna Rzepecka-Stojko, Paweł Olczyk
    Molecules.2020; 26(1): 148.     CrossRef
  • Potent virucidal activity of honeybee “Apis mellifera” venom against Hepatitis C Virus
    Moustafa Sarhan, Alaa M.H. El-Bitar, Hak Hotta
    Toxicon.2020; 188: 55.     CrossRef
  • Bee Venom—A Potential Complementary Medicine Candidate for SARS-CoV-2 Infections
    Keneth Iceland Kasozi, Gniewko Niedbała, Mohammed Alqarni, Gerald Zirintunda, Fred Ssempijja, Simon Peter Musinguzi, Ibe Michael Usman, Kevin Matama, Helal F. Hetta, Ngala Elvis Mbiydzenyuy, Gaber El-Saber Batiha, Amany Magdy Beshbishy, Susan Christina We
    Frontiers in Public Health.2020;[Epub]     CrossRef
  • Membrane Active Peptides Remove Surface Adsorbed Protein Corona From Extracellular Vesicles of Red Blood Cells
    Priyanka Singh, Imola Cs. Szigyártó, Maria Ricci, Ferenc Zsila, Tünde Juhász, Judith Mihály, Szilvia Bősze, Éva Bulyáki, József Kardos, Diána Kitka, Zoltán Varga, Tamás Beke-Somfai
    Frontiers in Chemistry.2020;[Epub]     CrossRef
  • Antimicrobial Properties of Apis mellifera’s Bee Venom
    Hesham El-Seedi, Aida Abd El-Wahed, Nermeen Yosri, Syed Ghulam Musharraf, Lei Chen, Moustafa Moustafa, Xiaobo Zou, Saleh Al-Mousawi, Zhiming Guo, Alfi Khatib, Shaden Khalifa
    Toxins.2020; 12(7): 451.     CrossRef
  • Linear and dendrimeric antiviral peptides: design, chemical synthesis and activity against human respiratory syncytial virus
    Ksenia V. Kozhikhova, Igor P. Shilovskiy, Artem A. Shatilov, Anastasiia V. Timofeeva, Evgeny A. Turetskiy, Liudmila I. Vishniakova, Aleksandr A. Nikolskii, Ekaterina D. Barvinskaya, Subramani Karthikeyan, Valeriy V. Smirnov, Dmitriy A. Kudlay, Sergey M. A
    Journal of Materials Chemistry B.2020; 8(13): 2607.     CrossRef
  • Bee Products in Dermatology and Skin Care
    Anna Kurek-Górecka, Michał Górecki, Anna Rzepecka-Stojko, Radosław Balwierz, Jerzy Stojko
    Molecules.2020; 25(3): 556.     CrossRef
  • Melittin: a venom-derived peptide with promising anti-viral properties
    Hamed Memariani, Mojtaba Memariani, Hamideh Moravvej, Mohammad Shahidi-Dadras
    European Journal of Clinical Microbiology & Infectious Diseases.2020; 39(1): 5.     CrossRef
  • Beekeepers who tolerate bee stings are not protected against SARS-CoV-2 infections
    Heidrun Männle, Jutta Hübner, Karsten Münstedt
    Toxicon.2020; 187: 279.     CrossRef
  • Antimicrobials from Venomous Animals: An Overview
    Tania Yacoub, Mohamad Rima, Marc Karam, Jean-Marc Sabatier, Ziad Fajloun
    Molecules.2020; 25(10): 2402.     CrossRef
  • Bee Venom: An Updating Review of Its Bioactive Molecules and Its Health Applications
    Maria Carpena, Bernabe Nuñez-Estevez, Anton Soria-Lopez, Jesus Simal-Gandara
    Nutrients.2020; 12(11): 3360.     CrossRef
  • Development of an antibacterial surface with a self-defensive and pH-responsive function
    Jing Zhang, Wenhe Zhu, Benkai Xin, Sue Lin, Libo Jin, Huiyan Wang
    Biomaterials Science.2019; 7(9): 3795.     CrossRef
  • Bee Venom: Overview of Main Compounds and Bioactivities for Therapeutic Interests
    Rim Wehbe, Jacinthe Frangieh, Mohamad Rima, Dany El Obeid, Jean-Marc Sabatier, Ziad Fajloun
    Molecules.2019; 24(16): 2997.     CrossRef
  • Bee Venom and Its Peptide Component Melittin Suppress Growth and Migration of Melanoma Cells via Inhibition of PI3K/AKT/mTOR and MAPK Pathways
    Haet Nim Lim, Seung Bae Baek, Hye Jin Jung
    Molecules.2019; 24(5): 929.     CrossRef
  • The Unique Protein Composition of Honey Revealed by Comprehensive Proteomic Analysis: Allergens, Venom-like Proteins, Antibacterial Properties, Royal Jelly Proteins, Serine Proteases, and Their Inhibitors
    Tomas Erban, Elena Shcherbachenko, Pavel Talacko, Karel Harant
    Journal of Natural Products.2019; 82(5): 1217.     CrossRef
  • Bee products and the treatment of blister-like lesions around the mouth, skin and genitalia caused by herpes viruses—A systematic review
    Karsten Münstedt
    Complementary Therapies in Medicine.2019; 43: 81.     CrossRef
  • Prospects For the Use of Peptides against Respiratory Syncytial Virus
    I. P. Shilovskiy, S. M. Andreev, K. V. Kozhikhova, A. A. Nikolskii, M. R. Khaitov
    Molecular Biology.2019; 53(4): 484.     CrossRef
  • Use of Selected Carbon Nanoparticles as Melittin Carriers for MCF-7 and MDA-MB-231 Human Breast Cancer Cells
    Karolina Daniluk, Marta Kutwin, Marta Grodzik, Mateusz Wierzbicki, Barbara Strojny, Jarosław Szczepaniak, Jaśmina Bałaban, Malwina Sosnowska, Andre Chwalibog, Ewa Sawosz, Sławomir Jaworski
    Materials.2019; 13(1): 90.     CrossRef
  • Potential Therapeutic Applications of Bee Venom on Skin Disease and Its Mechanisms: A Literature Review
    Haejoong Kim, Soo-Yeon Park, Gihyun Lee
    Toxins.2019; 11(7): 374.     CrossRef
  • An overview of the bioactive compounds, therapeutic properties and toxic effects of apitoxin
    Ananias Pascoal, Maria Manuela Estevinho, Altino Branco Choupina, Mário Sousa-Pimenta, Leticia M. Estevinho
    Food and Chemical Toxicology.2019; 134: 110864.     CrossRef
  • Hemin and bile pigments are the secondary structure regulators of intrinsically disordered antimicrobial peptides
    Ferenc Zsila, Tünde Juhász, Szilvia Bősze, Kata Horváti, Tamás Beke‐Somfai
    Chirality.2018; 30(2): 195.     CrossRef
  • Antimicrobial Activity of Bee Venom and Melittin against Borrelia burgdorferi
    Kayla Socarras, Priyanka Theophilus, Jason Torres, Khusali Gupta, Eva Sapi
    Antibiotics.2017; 6(4): 31.     CrossRef
  • Production of Antibodies in Chick by Bees Venom
    Mariyum Naz Gondal
    SSRN Electronic Journal .2017;[Epub]     CrossRef
Review
MINIREVIEW] Multidrug efflux pumps in Staphylococcus aureus and their clinical implications
Soojin Jang
J. Microbiol. 2016;54(1):1-8.   Published online January 5, 2016
DOI: https://doi.org/10.1007/s12275-016-5159-z
  • 422 View
  • 0 Download
  • 86 Crossref
AbstractAbstract PDF
Antibiotic resistance is rapidly spreading among bacteria such as Staphylococcus aureus, an opportunistic bacterial pathogen that causes a variety of diseases in humans. For the last two decades, bacterial multidrug efflux pumps have drawn attention due to their potential association with clinical multidrug resistance. Numerous researchers have demonstrated efflux-mediated resistance in vitro and in vivo and found novel multidrug transporters using advanced genomic information about bacteria. This article aims to provide a concise summary of multidrug efflux pumps and their important clinical implications, focusing on recent findings concerning S. aureus efflux pumps.

Citations

Citations to this article as recorded by  
  • The role and mechanism of efflux pump norB in biofilm formation of Staphylococcus aureus
    Wenjing Cui, Xuan Liang, Wenwei Xiao, Ying Wang, Fang Liu, Shuaiyin Chen, Jinzhao Long, Yuefei Jin, Guangcai Duan, Haiyan Yang
    Gene.2025; 936: 149105.     CrossRef
  • Description of Massilia orientalis sp. nov., Isolated from Rhizosphere Soil of Ageratina adenophora
    Yun Xia, Xing-Feng Qian, Xin Chen, Bo Wang, Yong-Xia Wang
    Current Microbiology.2025;[Epub]     CrossRef
  • The Global Challenge of Antimicrobial Resistance: Mechanisms, Case Studies, and Mitigation Approaches
    Abubakar Nazir, Awais Nazir, Varisha Zuhair, Shafaq Aman, Safi Ur Rehman Sadiq, Abdul Haseeb Hasan, Maryam Tariq, Latif Ur Rehman, Mubarak Jolayemi Mustapha, Deusdedith Boniphace Bulimbe
    Health Science Reports.2025;[Epub]     CrossRef
  • Therapeutic potential of botanical drugs and their metabolites in the treatment of pelvic inflammatory disease
    Han-Zhi Zhong, Pei-Jia Yan, Qi-Feng Gao, Jue Wu, Xiao-Li Ji, Shao-Bin Wei
    Frontiers in Pharmacology.2025;[Epub]     CrossRef
  • Pharmacophore modeling, 2D-QSAR, molecular docking and ADME studies for the discovery of inhibitors of PBP2a in MRSA
    Fredrick Mutie Musila, Grace Wairimu Gitau, Peris Wanza Amwayi, James Munyao Kingoo, Dickson Bennet Kinyanyi, Patrisio Njiru Njeru
    Journal of Biomolecular Structure and Dynamics.2025; : 1.     CrossRef
  • Emerging antibiotic resistance by various novel proteins/enzymes
    Shengwei Sun
    European Journal of Clinical Microbiology & Infectious Diseases.2025; 44(7): 1551.     CrossRef
  • Unlockable Nanocaged Photodynamic Nanofiber Membranes for pH-Responsive Antibacterial Therapy via Rose Bengal Encapsulation in ZIF-8
    Lingling Li, Zihao Lv, Hao Jiang, Xiaoxian Zhao, Lan Wu, Xiuming Cao, Helan Xu, Qufu Wei, Qingqing Wang
    ACS Applied Nano Materials.2025; 8(23): 11952.     CrossRef
  • Multidrug resistance and major facilitator superfamily antimicrobial efflux pumps of the ESKAPEE pathogen Staphylococcus aureus
    Ebenezer Aborah, Matthew Ayitah, Kwesi Felix Boafo, Anely Ortiz-Alegria, Manjusha Lekshmi, Chandrashekar K. Dhanush, Sanath Kumar, Manuel F. Varela
    Exploration of Drug Science.2025;[Epub]     CrossRef
  • Multifunctional hyaluronic acid-based biomimetic/pH-responsive hybrid nanostructured lipid carriers for treating bacterial sepsis
    Eman Elhassan, Calvin A. Omolo, Mohammed A. Gafar, Eman A. Ismail, Usri H. Ibrahim, Rene Khan, Mathieu Lesouhaitier, Paul Kubes, Thirumala Govender
    Journal of Biomedical Science.2025;[Epub]     CrossRef
  • Increased Expression of AbcA Efflux Pump Accelerated Resistance Development from Tolerance to Resistance Against Oxacillin in Staphylococcus aureus
    Xiaohui Yu, Miaomiao Liu, Pilong Liu, Zehua Hao, Lili Zhao, Xin Zhao
    Microorganisms.2025; 13(5): 1140.     CrossRef
  • Evaluation of Antibiotic Resistance Mechanisms in Gram-Positive Bacteria
    Pratiksing Rajput, Kazi S. Nahar, Khondaker Miraz Rahman
    Antibiotics.2024; 13(12): 1197.     CrossRef
  • Repeated Exposure of Vancomycin to Vancomycin-Susceptible Staphylococcus aureus (VSSA) Parent Emerged VISA and VRSA Strains with Enhanced Virulence Potentials
    An Nguyen, J. Jean Sophy Roy, Ji-Hoon Kim, Kyung-Hee Yun, Wonsik Lee, Kyeong Kyu Kim, Truc Kim, Akhilesh Kumar Chaurasia
    Journal of Microbiology.2024; 62(7): 535.     CrossRef
  • Structural characterization, DFT calculations, ADMET studies, antibiotic potentiating activity, evaluation of efflux pump inhibition and molecular docking of heterocylcic chalcone (E)-1-(4-aminophenyl)-3-(thiophen-2-yl)prop-2-en-1-one
    Priscila Teixeira da Silva, Francisco Rogenio da Silva Mendes, Francisco Wagner Queiroz Almeida-Neto, Emmanuel Silva Marinho, Larissa da Silva, Murilo Sérgio da Silva Julião, Marcia Machado Marinho, Laura Maria Teodorio Vidal, Alejandro Pedro Ayala, Henri
    Journal of Molecular Structure.2024; 1312: 138497.     CrossRef
  • Recent advances in the use of resveratrol against Staphylococcus aureus infections (Review)
    Wenjing Cui, Yadong Wang, Li Zhang, Fang Liu, Guangcai Duan, Shuaiyin Chen, Jinzhao Long, Yuefei Jin, Haiyan Yang
    Medicine International.2024;[Epub]     CrossRef
  • Tackling Nontuberculous Mycobacteria by Repurposable Drugs and Potential Leads from Natural Products
    Patil Amruta Adhikrao, Gudle Mayuri Motiram, Gautam Kumar
    Current Topics in Medicinal Chemistry.2024; 24(15): 1291.     CrossRef
  • Genomic analysis of Oceanotoga teriensis strain UFV_LIMV02, a multidrug-resistant thermophilic bacterium isolated from an offshore oil reservoir
    Adriele Jéssica do Carmo Santos, Roberto Sousa Dias, Carlos Henrique Martins da Silva, Pedro Marcus Pereira Vidigal, Maíra Paula de Sousa, Cynthia Canedo da Silva, Sérgio Oliveira de Paula
    Access Microbiology .2024;[Epub]     CrossRef
  • Plant-based Natural Products as inhibitors for Efflux Pumps to Reverse Multidrug Resistance in Staphylococcus aureus: A Mini Review
    Shalini Ramalingam, Moola Joghee Nanjan Chandrasekar, Ganesh G.N. Krishnan, Moola Joghee Nanjan
    Mini-Reviews in Medicinal Chemistry.2024; 24(3): 272.     CrossRef
  • Thiazine-derived compounds in inhibiting efflux pump in Staphylococcus aureus K2068, mepA gene expression, and membrane permeability alteration
    Priscilla R. Freitas, Ana C.J. de Araújo, Isaac M. Araújo, Ray S. de Almeida, João A.O. Borges, Cícera L.R. Paulo, Cícera D.M. Oliveira-Tintino, Gustavo M. Miranda, José B. Araújo-Neto, Igor J.S. Nascimento, João X. Araújo-Júnior, Julia M.A. Silva, Tereza
    Biomedicine & Pharmacotherapy.2024; 179: 117291.     CrossRef
  • Boron-Containing Compounds as Antimicrobial Agents to Tackle Drug-Resistant Bacteria
    Zongkai Huang, Lang Bai, Jie Liu, Youfu Luo
    Pharmaceutical Fronts.2024; 06(04): e336.     CrossRef
  • Multidrug-Resistant Methicillin-Resistant Staphylococcus aureus Associated with Hospitalized Newborn Infants
    Ching Hoong Chew, Chew Chieng Yeo, Ainal Mardziah Che Hamzah, Esra’a I. Al-Trad, Sherry Usun Jones, Kek Heng Chua, Suat Moi Puah
    Diagnostics.2023; 13(6): 1050.     CrossRef
  • Tackling multidrug-resistant Staphylococcus aureus by natural products and their analogues acting as NorA efflux pump inhibitors
    Gautam Kumar, Asha Kiran Tudu
    Bioorganic & Medicinal Chemistry.2023; 80: 117187.     CrossRef
  • Emerging Strategies to Combat Methicillin-resistant Staphylococcus aureus (MRSA): Natural Agents with High Potential
    Jonata M. Ueda, Catarina Milho, Sandrina A. Heleno, Anton Soria-Lopez, Maria Carpena, Maria J. Alves, Tânia Pires, Miguel A. Prieto, Jesus Simal-Gandara, Ricardo C. Calhelha, Isabel C.F.R. Ferreira, Lillian Barros
    Current Pharmaceutical Design.2023; 29(11): 837.     CrossRef
  • Stingray epidermal microbiomes are species-specific with local adaptations
    Emma N. Kerr, Bhavya Papudeshi, Miranda Haggerty, Natasha Wild, Asha Z. Goodman, Lais F. O. Lima, Ryan D. Hesse, Amber Skye, Vijini Mallawaarachchi, Shaili Johri, Sophia Parker, Elizabeth A. Dinsdale
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Antibacterial potential of chalcones and its derivatives against Staphylococcus aureus
    Larissa da Silva, Isydorio Alves Donato, Cicera Alane Coelho Gonçalves, Jackelyne Roberta Scherf, Hélcio Silva dos Santos, Edna Mori, Henrique Douglas Melo Coutinho, Francisco Assis Bezerra da Cunha
    3 Biotech.2023;[Epub]     CrossRef
  • High-level delafloxacin resistance through the combination of two different mechanisms in Staphylococcus aureus
    José Manuel Ortiz de la Rosa, María Aznar Fernández, Ángel Rodríguez-Villodres, Carlos S Casimiro-Soriguer, José Miguel Cisneros, José Antonio Lepe
    International Journal of Antimicrobial Agents.2023; 61(6): 106795.     CrossRef
  • Selective Bacteriocins: A Promising Treatment for Staphylococcus aureus Skin Infections Reveals Insights into Resistant Mutants, Vancomycin Resistance, and Cell Wall Alterations
    Félix Jaumaux, Kenny Petit, Anandi Martin, Hector Rodriguez-Villalobos, Marjorie Vermeersch, David Perez-Morga, Philippe Gabant
    Antibiotics.2023; 12(6): 947.     CrossRef
  • Mechanisms of microbial resistance against cadmium – a review
    Monu Sharma, Sonu Sharma, Paavan, Mahiti Gupta, Soniya Goyal, Daizee Talukder, Mohd. Sayeed Akhtar, Raman Kumar, Ahmad Umar, Abdulrab Ahmed M. Alkhanjaf, Sotirios Baskoutas
    Journal of Environmental Health Science and Engineering.2023; 22(1): 13.     CrossRef
  • Efflux Pump (QacA, QacB, and QacC) and β-Lactamase Inhibitors? An Evaluation of 1,8-Naphthyridines against Staphylococcus aureus Strains
    Cícera Datiane de Morais Oliveira-Tintino, Saulo Relison Tintino, Ana Carolina Justino de Araújo, Cristina Rodrigues dos Santos Barbosa, Priscilla Ramos Freitas, José Bezerra de Araújo Neto, Iêda Maria Begnini, Ricardo Andrade Rebelo, Luiz Everson da Silv
    Molecules.2023; 28(4): 1819.     CrossRef
  • Chemical Composition, Antibacterial and Inhibitory Activity of the Efflux Pump of Essential Oils from Croton piauhiensis Müll.
    Beatriz Gonçalves Cruz, Thiago Sampaio de Freitas, Maria do Socorro Costa, Ana Raquel Pereira da Silva, Henrique Douglas Melo Coutinho, Selene Maia de Morais, Emmanuel Silva Marinho, Alexandre Magno Rodrigues Teixeira, Hélcio Silva dos Santos
    Nutraceuticals.2023; 3(4): 591.     CrossRef
  • Photodynamic therapy-a promising treatment of oral mucosal infections
    Ting Chen, Dan Yang, Shangxue Lei, Jiaxin Liu, Yansong Song, Hang Zhao, Xin Zeng, Hongxia Dan, Qianming Chen
    Photodiagnosis and Photodynamic Therapy.2022; 39: 103010.     CrossRef
  • Oxazolidine Compounds from Neocalytrocalyx Longifolium (Capparaceae) and Their Activity as Msra (ABC) Efflux Pump Inhibitors: An in Vitro and in Silico Approach
    Thalisson Amorim de Souza, Joanda Paolla Raimundo e Silva, Damara Freitas Rodrigues, Chonny Herrera-Acevedo, Renata Priscila Barros de Menezes, Nathalie H. P. B. Borges, José Iranildo Miranda de Melo, José Pinto de Siqueira-Júnior, Marcus Tullius Scotti,
    SSRN Electronic Journal .2022;[Epub]     CrossRef
  • Efficacy of Cordyceps militaris Extracts against Some Skin Pathogenic Bacteria and Antioxidant Activity
    Kiratiya Eiamthaworn, Thida Kaewkod, Sakunnee Bovonsombut, Yingmanee Tragoolpua
    Journal of Fungi.2022; 8(4): 327.     CrossRef
  • Promising FDA-approved drugs with efflux pump inhibitory activities against clinical isolates of Staphylococcus aureus
    Safaa Abdel-Aal Mohamed Abdel-Karim, Amira Mohamed Ali El-Ganiny, Mona Abdelmonem El-Sayed, Hisham Abdelmonem Abdelhamid Abbas, Taeok Bae
    PLOS ONE.2022; 17(7): e0272417.     CrossRef
  • Impeding efflux-mediated resistance in Staphylococcus aureus
    Safaa A. M. Abdel-Karim, Amira M. A. El-Ganiny, Mona A. El-Sayed, Hisham A. Abbas
    Research Journal of Pharmacy and Technology.2022; : 4300.     CrossRef
  • Microbial Resistance to Antibiotics and Effective Antibiotherapy
    Adriana Aurelia Chiș, Luca Liviu Rus, Claudiu Morgovan, Anca Maria Arseniu, Adina Frum, Andreea Loredana Vonica-Țincu, Felicia Gabriela Gligor, Maria Lucia Mureșan, Carmen Maximiliana Dobrea
    Biomedicines.2022; 10(5): 1121.     CrossRef
  • Urea-Based Ligand as an Efflux Pump Inhibitor: Warhead to Counter Ciprofloxacin Resistance and Inhibit Collagen Adhesion by MRSA
    Basu Bhattacharjee, Asesh Das, Gopal Das, Aiyagari Ramesh
    ACS Applied Bio Materials.2022; 5(4): 1710.     CrossRef
  • Molecular Investigation of Enterotoxigenic Staphylococcus aureus Isolates from Restaurant Staff
    Mahsa Tahaei, Leila Fozouni, Morteza Khademi
    Middle East Journal of Rehabilitation and Health Studies.2022;[Epub]     CrossRef
  • Plantaricin A reverses resistance to ciprofloxacin of multidrug‐resistant Staphylococcus aureus by inhibiting efflux pumps
    Fanqiang Meng, Ting Nie, Yunbin Lyu, Fengxia Lyu, Xiaomei Bie, Yingjian Lu, Mingwen Zhao, Zhaoxin Lu
    Environmental Microbiology.2022; 24(10): 4818.     CrossRef
  • Molecular Basis of Non-β-Lactam Antibiotics Resistance in Staphylococcus aureus
    Harshad Lade, Hwang-Soo Joo, Jae-Seok Kim
    Antibiotics.2022; 11(10): 1378.     CrossRef
  • Increased Expression of Efflux Pump norA Drives the Rapid Evolutionary Trajectory from Tolerance to Resistance against Ciprofloxacin in Staphylococcus aureus
    X. H. Yu, Z. H. Hao, P. L. Liu, M. M. Liu, L. L. Zhao, X. Zhao
    Antimicrobial Agents and Chemotherapy.2022;[Epub]     CrossRef
  • Propolis in the control of bacterial bovine mastitis: a tool for the production of organic milk
    Gabriel Michelutti do Nascimento, Marita Vedovelli Cardozo, Mylena Karoline Valmorbida, Natália Pereira, José Carlos Barbosa, Flávio Rubens Favaron Júnior, Fernando Antônio de Ávila
    Semina: Ciências Agrárias.2022; 43(2): 869.     CrossRef
  • Calcium phosphate nanoparticles as intrinsic inorganic antimicrobials: mechanism of action
    Victoria M Wu, Eric Huynh, Sean Tang, Vuk Uskoković
    Biomedical Materials.2021; 16(1): 015018.     CrossRef
  • A Fine-Tuned Lipophilicity/Hydrophilicity Ratio Governs Antibacterial Potency and Selectivity of Bifurcated Halogen Bond-Forming NBTIs
    Anja Kolarič, Maja Kokot, Martina Hrast, Matjaž Weiss, Irena Zdovc, Jurij Trontelj, Simon Žakelj, Marko Anderluh, Nikola Minovski
    Antibiotics.2021; 10(7): 862.     CrossRef
  • Bacterial Targets of Antibiotics in Methicillin-Resistant Staphylococcus aureus
    Harshad Lade, Jae-Seok Kim
    Antibiotics.2021; 10(4): 398.     CrossRef
  • Antibacterial properties of capsaicin and its derivatives and their potential to fight antibiotic resistance – A literature survey
    Samuel Füchtbauer, Soraya Mousavi, Stefan Bereswill, Markus M. Heimesaat
    European Journal of Microbiology and Immunology.2021; 11(1): 10.     CrossRef
  • A Short Review on Advances in Nanosystems Emerging as an Effective Approaches to Control Pathogenesis of Staphylococcus spp
    Giri Ved Prakash, Shukla Pallavi, Tripathi Ashutosh, Kumar Navinit, Verma Priya, Pandey Shipra, Mishra Aradhana
    Global Journal of Infectious Diseases and Clinical Research.2021; : 049.     CrossRef
  • Cystic Fibrosis Sputum Impairs the Ability of Neutrophils to Kill Staphylococcus aureus
    Kayla Fantone, Samantha L. Tucker, Arthur Miller, Ruchi Yadav, Eryn E. Bernardy, Rachel Fricker, Arlene A. Stecenko, Joanna B. Goldberg, Balázs Rada
    Pathogens.2021; 10(6): 703.     CrossRef
  • Genetic traceability of Staphylococcus aureus strains isolated from primiparous dairy cows mastitis, humans and environment in the Northeast region of Brazil
    Amanda Thaís Ferreira Silva, José Givanildo da Silva, Breno Bezerra Aragão, Núbia Michelle Vieira da Silva, Priscylla Carvalho Vasconcelos, Celso José Bruno de Oliveira, Rinaldo Aparecido Mota
    Ciência Rural.2021;[Epub]     CrossRef
  • Molecular Characteristics and Exotoxins of Methicillin-Resistant Staphylococcus aureus
    Jinyoung Bae, Hyunwoo Jin, Jungho Kim, Min Park, Jiyoung Lee, Sunghyun Kim
    Biomedical Science Letters.2021; 27(4): 195.     CrossRef
  • Microbial Efflux Pump Inhibitors: A Journey around Quinoline and Indole Derivatives
    Giada Cernicchi, Tommaso Felicetti, Stefano Sabatini
    Molecules.2021; 26(22): 6996.     CrossRef
  • First report of a livestock‐associated methicillin‐resistant Staphylococcus aureus ST126 harbouring the mecC variant in Brazil
    José Givanildo Silva, Wydemberg José Araujo, Elma Lima Leite, Larissa Maranhão Dias, Priscylla Carvalho Vasconcelos, Núbia Michelle Vieira Silva, Raylson Pereira Oliveira, Maria José Sena, Celso José Bruno Oliveira, Rinaldo Aparecido Mota
    Transboundary and Emerging Diseases.2021; 68(3): 1019.     CrossRef
  • Ribosome‐targeting antibacterial agents: Advances, challenges, and opportunities
    Laiying Zhang, Jun He, Lang Bai, Shihua Ruan, Tao Yang, Youfu Luo
    Medicinal Research Reviews.2021; 41(4): 1855.     CrossRef
  • Effect of Carvacrol and Thymol on NorA efflux pump inhibition in multidrug-resistant (MDR) Staphylococcus aureus strains
    Cristina Rodrigues dos Santos Barbosa, Jackelyne Roberta Scherf, Thiago Sampaio de Freitas, Irwin Rose Alencar de Menezes, Raimundo Luiz Silva Pereira, Joycy Francely Sampaio dos Santos, Sarah Silva Patrício de Jesus, Thais Pereira Lopes, Zildene de Sousa
    Journal of Bioenergetics and Biomembranes.2021; 53(4): 489.     CrossRef
  • Disinfectant resistance in bacteria: Mechanisms, spread, and resolution strategies
    Chaoyu Tong, Hong Hu, Gang Chen, Zhengyan Li, Aifeng Li, Jianye Zhang
    Environmental Research.2021; 195: 110897.     CrossRef
  • Antimicrobial activity of polypyrrole nanoparticles and aqueous extract ofMoringa oleiferaagainstStaphylococcusspp. carriers of multi-drug efflux system genes isolated from dairy farms
    José Givanildo da Silva, Mariana de Barros, Nataly Diniz de Lima Santos, Patrícia Maria Guedes Paiva, Thiago Henrique Napoleão, Maria José de Sena, Mateus Matiuzzi da Costa, Helinando Pequeno de Oliveira, Maria Aparecida Scatamburlo Moreira, Rinaldo Apare
    Journal of Dairy Research.2020; 87(3): 309.     CrossRef
  • Evidence of Calcium Signaling and Modulation of the LmrS Multidrug Resistant Efflux Pump Activity by Ca2 + Ions in S. aureus
    Amy R. Nava, Natalia Mauricio, Angel J. Sanca, Delfina C. Domínguez
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Antibacterial Activity of Hexadecynoic Acid Isomers toward Clinical Isolates of Multidrug‐Resistant Staphylococcus aureus
    David J. Sanabria‐Ríos, Christian Morales‐Guzmán, Joseph Mooney, Solymar Medina, Tomás Pereles‐De‐León, Ashley Rivera‐Román, Carlimar Ocasio‐Malavé, Damarith Díaz, Nataliya Chorna, Néstor M. Carballeira
    Lipids.2020; 55(2): 101.     CrossRef
  • Functional and Structural Roles of the Major Facilitator Superfamily Bacterial Multidrug Efflux Pumps
    Sanath Kumar, Manjusha Lekshmi, Ammini Parvathi, Manisha Ojha, Nicholas Wenzel, Manuel F. Varela
    Microorganisms.2020; 8(2): 266.     CrossRef
  • Epidemiology of efflux pumps genes mediating resistance among Staphylococcus aureus; A systematic review
    Sepideh Hassanzadeh, Sara ganjloo, Mohammad Reza Pourmand, Rahil Mashhadi, Kiarash Ghazvini
    Microbial Pathogenesis.2020; 139: 103850.     CrossRef
  • Role of efflux in enhancing butanol tolerance of bacteria
    Maryna Vasylkivska, Petra Patakova
    Journal of Biotechnology.2020; 320: 17.     CrossRef
  • Strategies for recombinant production of antimicrobial peptides with pharmacological potential
    Kamila Botelho Sampaio de Oliveira, Michel Lopes Leite, Gisele Regina Rodrigues, Harry Morales Duque, Rosiane Andrade da Costa, Victor Albuquerque Cunha, Lorena Sousa de Loiola Costa, Nicolau Brito da Cunha, Octavio Luiz Franco, Simoni Campos Dias
    Expert Review of Clinical Pharmacology.2020; 13(4): 367.     CrossRef
  • Evaluation of the Antibacterial Activity and Efflux Pump Reversal of Thymol and Carvacrol against Staphylococcus aureus and Their Toxicity in Drosophila melanogaster
    Zildene de Sousa Silveira, Nair Silva Macêdo, Joycy Francely Sampaio dos Santos, Thiago Sampaio de Freitas, Cristina Rodrigues dos Santos Barbosa, Dárcio Luiz de Sousa Júnior, Débora Feitosa Muniz, Lígia Claudia Castro de Oliveira, José Pinto Siqueira Jún
    Molecules.2020; 25(9): 2103.     CrossRef
  • Efflux pump activity potentiates the evolution of antibiotic resistance across S. aureus isolates
    Andrei Papkou, Jessica Hedge, Natalia Kapel, Bernadette Young, R. Craig MacLean
    Nature Communications.2020;[Epub]     CrossRef
  • Pulmonary Staphylococcus aureus infection regulates breast cancer cell metastasis via neutrophil extracellular traps (NETs) formation
    Jia‐Long Qi, Jin‐Rong He, Cun‐Bao Liu, Shu‐Mei Jin, Rui‐Yu Gao, Xu Yang, Hong‐Mei Bai, Yan‐Bing Ma
    MedComm.2020; 1(2): 188.     CrossRef
  • Capsaicin and Gut Microbiota in Health and Disease
    Adrian Eugen Rosca, Mara Ioana Iesanu, Carmen Denise Mihaela Zahiu, Suzana Elena Voiculescu, Alexandru Catalin Paslaru, Ana-Maria Zagrean
    Molecules.2020; 25(23): 5681.     CrossRef
  • Prevalence and Therapies of Antibiotic-Resistance in Staphylococcus aureus
    Yunlei Guo, Guanghui Song, Meiling Sun, Juan Wang, Yi Wang
    Frontiers in Cellular and Infection Microbiology.2020;[Epub]     CrossRef
  • Milk microbial composition of Brazilian dairy cows entering the dry period and genomic comparison between Staphylococcus aureus strains susceptible to the bacteriophage vB_SauM-UFV_DC4
    Vinícius da Silva Duarte, Laura Treu, Cristina Sartori, Roberto Sousa Dias, Isabela da Silva Paes, Marcella Silva Vieira, Gabriele Rocha Santana, Marcos Inácio Marcondes, Alessio Giacomini, Viviana Corich, Stefano Campanaro, Cynthia Canedo da Silva, Sérgi
    Scientific Reports.2020;[Epub]     CrossRef
  • Phenotypic and genotypic methods for identification of slime layer production, efflux pump activity, and antimicrobial resistance genes as potential causes of the antimicrobial resistance of some mastitis pathogens from farms in Menoufia, Egypt
    Mohamed Sabry Abd Elraheam Elsayed, Tamer Roshdey, Ahmed Salah, Reda Tarabees, Gamal Younis, Doaa Eldeep
    Molecular Biology Reports.2019; 46(6): 6533.     CrossRef
  • Essential Oil, Extracts, and Sesquiterpenes Obtained From the Heartwood of Pilgerodendron uviferum Act as Potential Inhibitors of the Staphylococcus aureus NorA Multidrug Efflux Pump
    Javier Espinoza, Alejandro Urzúa, Loreto Sanhueza, Mariana Walter, Paola Fincheira, Patricia Muñoz, Leonora Mendoza, Marcela Wilkens
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Efflux pump inhibitors of clinically relevant multidrug resistant bacteria
    Andraž Lamut, Lucija Peterlin Mašič, Danijel Kikelj, Tihomir Tomašič
    Medicinal Research Reviews.2019; 39(6): 2460.     CrossRef
  • Transcriptome analysis of silver nanoparticles treated Staphylococcus aureus reveals potential targets for biofilm inhibition
    Nimisha Singh, Jyutika Rajwade, K.M. Paknikar
    Colloids and Surfaces B: Biointerfaces.2019; 175: 487.     CrossRef
  • Synthesis of amides from (E)-3-(1-chloro-3,4-dihydronaphthalen-2-yl)acrylic acid and substituted amino acid esters as NorA efflux pump inhibitors of Staphylococcus aureus
    Santosh K. Rath, Samsher Singh, Sunil Kumar, Naiem A. Wani, Rajkishor Rai, Surrinder Koul, Inshad A. Khan, Payare L. Sangwan
    Bioorganic & Medicinal Chemistry.2019; 27(2): 343.     CrossRef
  • Biosynthesis of Fe3O4@Ag Nanocomposite and Evaluation of Its Performance on Expression of norA and norB Efflux Pump Genes in Ciprofloxacin-Resistant Staphylococcus aureus
    Nastaran Shokoofeh, Zeinab Moradi-Shoeili, Akram Sadat Naeemi, Amir Jalali, Mohammad Hedayati, Ali Salehzadeh
    Biological Trace Element Research.2019; 191(2): 522.     CrossRef
  • Antibacterial effect of S-Porphin sodium photodynamic therapy on Staphylococcus aureus and multiple drug resistance Staphylococcus aureus
    Mengqi Jia, Bingjie Mai, Shupei Liu, Zhaozhao Li, Quanhong Liu, Pan Wang
    Photodiagnosis and Photodynamic Therapy.2019; 28: 80.     CrossRef
  • Targeted magnetic separation of biomolecules and cells using earthicle-based ferrofluids
    Vuk Uskoković, Sean Tang, Victoria M. Wu
    Nanoscale.2019; 11(23): 11236.     CrossRef
  • Modulation of antimicrobial efflux pumps of the major facilitator superfamily in Staphylococcus aureus
    Manjusha Lekshmi, Parvathi Ammini, Jones Adjei, Leslie M. Sanford, Ugina Shrestha, Sanath Kumar, Manuel F. Varela
    AIMS Microbiology.2018; 4(1): 1.     CrossRef
  • Graphene Oxide-Based Nanocomposites Decorated with Silver Nanoparticles as an Antibacterial Agent
    Sławomir Jaworski, Mateusz Wierzbicki, Ewa Sawosz, Anna Jung, Grzegorz Gielerak, Joanna Biernat, Henryk Jaremek, Witold Łojkowski, Bartosz Woźniak, Jacek Wojnarowicz, Leszek Stobiński, Artur Małolepszy, Marta Mazurkiewicz-Pawlicka, Maciej Łojkowski, Natal
    Nanoscale Research Letters.2018;[Epub]     CrossRef
  • A review on mechanism and future perspectives of cadmium-resistant bacteria
    S. Z. Abbas, M. Rafatullah, K. Hossain, N. Ismail, H. A. Tajarudin, H. P. S. Abdul Khalil
    International Journal of Environmental Science and Technology.2018; 15(1): 243.     CrossRef
  • Role and mechanism of cell-surface hydrophobicity in the adaptation of Sphingobium hydrophobicum to electronic-waste contaminated sediment
    Xingjuan Chen, Da Song, Jingjing Xu, Enze Li, Guoping Sun, Meiying Xu
    Applied Microbiology and Biotechnology.2018; 102(6): 2803.     CrossRef
  • Emerging Nanomedicine Therapies to Counter the Rise of Methicillin-Resistant Staphylococcus aureus
    Alan Hibbitts, Cian O’Leary
    Materials.2018; 11(2): 321.     CrossRef
  • Effect of Staphylococcus aureus Tet38 native efflux pump on in vivo response to tetracycline in a murine subcutaneous abscess model
    Chunhui Chen, David C Hooper
    Journal of Antimicrobial Chemotherapy.2018; 73(3): 720.     CrossRef
  • New strategies for targeting and treatment of multi-drug resistant Staphylococcus aureus
    L. Mayrink Assis, M. Nedeljković, A. Dessen
    Drug Resistance Updates.2017; 31: 1.     CrossRef
  • Modulation of Staphylococcus aureus Response to Antimicrobials by the Candida albicans Quorum Sensing Molecule Farnesol
    Eric F. Kong, Christina Tsui, Sona Kucharíková, Patrick Van Dijck, Mary Ann Jabra-Rizk
    Antimicrobial Agents and Chemotherapy.2017;[Epub]     CrossRef
  • Amphiphilic Cargo‐Loaded Nanocarrier Enhances Antibiotic Uptake and Perturbs Efflux: Effective Synergy for Mitigation of Methicillin‐Resistant Staphylococcus aureus
    Durairaj Thiyagarajan, Gopal Das, Aiyagari Ramesh
    ChemMedChem.2017; 12(14): 1125.     CrossRef
  • Eradication and Sensitization of Methicillin Resistant Staphylococcus aureus to Methicillin with Bioactive Extracts of Berry Pomace
    Serajus Salaheen, Mengfei Peng, Jungsoo Joo, Hironori Teramoto, Debabrata Biswas
    Frontiers in Microbiology.2017;[Epub]     CrossRef
  • Multidrug Efflux Pumps at the Crossroad between Antibiotic Resistance and Bacterial Virulence
    Manuel Alcalde-Rico, Sara Hernando-Amado, Paula Blanco, José L. Martínez
    Frontiers in Microbiology.2016;[Epub]     CrossRef
Research Support, Non-U.S. Gov't
Pyrosequencing Analysis of the Bacterial Communities in the Guts of Honey Bees Apis cerana and Apis mellifera in Korea
Jae-Hyung Ahn , In-Pyo Hong , Jeung-Im Bok , Byung-Yong Kim , Jaekyeong Song , Hang-Yeon Weon
J. Microbiol. 2012;50(5):735-745.   Published online November 4, 2012
DOI: https://doi.org/10.1007/s12275-012-2188-0
  • 217 View
  • 0 Download
  • 84 Crossref
AbstractAbstract
The bacterial communities in the guts of the adults and larvae of the Asian honey bee Apis cerana and the European honey bee Apis mellifera were surveyed by pyrosequencing the 16S rRNA genes. Most of the gut bacterial 16S rRNA gene sequences were highly similar to the known honey bee-specific ones and affiliated with Pasteurellaceae or lactic acid bacteria (LAB). The numbers of operational taxonomic units (OTUs, defined at 97% similarity) were lower in the larval guts (6 or 9) than in the adult guts (18 or 20), and the frequencies of Pasteurellaceae-related OTUs were higher in the larval guts while those of LAB-related OTUs in the adult guts. The frequencies of Lactococcus, Bartonella, Spiroplasma, Enterobacteriaceae, and Flavobacteriaceae-related OTUs were much higher in A. cerana guts while Bifidobacterium and Lachnospiraceae-related OTUs were more abundant in A. mellfera guts. The bacterial community structures in the midguts and hindguts of the adult honey bees were not different for A. cerana, but significantly different for A. mellifera. The above results substantiated the previous observation that honey bee guts are dominated by several specific bacterial groups, and also showed that the relative abundances of OTUs could be markedly changed depending on the developmental stage, the location within the gut, and the honey bee species. The possibility of using the gut bacterial community as an indicator of honey bee health was discussed.

Citations

Citations to this article as recorded by  
  • Characterization of gut microbiota in Apis cerana Across different altitudes in the Peninsular India
    K. Hariprasath, M. Dhanvarsha, S. Mohankumar, M. Sudha, N. Saranya, V. R. Saminathan, S. Subramanian
    BMC Ecology and Evolution.2025;[Epub]     CrossRef
  • High abundance of lactobacilli in the gut microbiome of honey bees during winter
    Gagandeep Brar, Lyna Ngor, Quinn S. McFrederick, Alex S. Torson, Arun Rajamohan, Joesph Rinehart, Preetpal Singh, Julia H. Bowsher
    Scientific Reports.2025;[Epub]     CrossRef
  • Host Plant Dependence of the Symbiotic Microbiome of the Gall-Inducing Wasp Trichagalma acutissimae
    Yingnan Wang, Yuanchen Zhang, Ran Li, Yujian Li, Muha Cha, Xianfeng Yi
    Insects.2025; 16(7): 652.     CrossRef
  • Bacterial diversity in honey bee environment: Embu County, Kenya
    James K. Njoroge, Moses Njire, Julianna Maina, Romano Mwirichia, Franklin N. Nyabuga, Julius Mugweru
    Scientific African.2024; 23: e02036.     CrossRef
  • Comprehensive analysis of the microbiome in Apis cerana honey highlights honey as a potential source for the isolation of beneficial bacterial strains
    Pham T. Lanh, Bui T.T. Duong, Ha T. Thu, Nguyen T. Hoa, Dong Van Quyen
    PeerJ.2024; 12: e17157.     CrossRef
  • Impacts of Apis cerana gut microbes on Nosema ceranae proliferation in Apis mellifera
    Zhihao Wu, Xiuxiu Wei, Lizhen Zhang, Zhijiang Zeng, Weiyu Yan, Qiang Huang
    Journal of Apicultural Research.2024; 63(4): 694.     CrossRef
  • Analyzing Gut Microbial Community in Varroa destructor-Infested Western Honeybee (Apis mellifera)
    Minji Kim, Woo Jae Kim, Soo-Je Park
    Journal of Microbiology and Biotechnology.2023; 33(11): 1495.     CrossRef
  • Microbial Diversity in Bee Species and Bee Products: Pseudomonads Contribution to Bee Well-Being and the Biological Activity Exerted by Honey Bee Products: A Narrative Review
    Christina Tsadila, Chiara Amoroso, Dimitris Mossialos
    Diversity.2023; 15(10): 1088.     CrossRef
  • Infestation of Apis mellifera workers and larvae with Varroa destructor affects gut bacterial diversity
    F.F. Abuldahab, M.F. Abd-ElAziz, Y.A. El-Sayed, M.S. Abdallah, S.H. Mahmoud
    Journal of Entomological and Acarological Research.2022;[Epub]     CrossRef
  • Toward global integration of biodiversity big data: a harmonized metabarcode data generation module for terrestrial arthropods
    Paula Arribas, Carmelo Andújar, Kristine Bohmann, Jeremy R deWaard, Evan P Economo, Vasco Elbrecht, Stefan Geisen, Marta Goberna, Henrik Krehenwinkel, Vojtech Novotny, Lucie Zinger, Thomas J Creedy, Emmanouil Meramveliotakis, Víctor Noguerales, Isaac Over
    GigaScience.2022;[Epub]     CrossRef
  • Isolation, Identification, and Analysis of Potential Functions of Culturable Bacteria Associated with an Invasive Gall Wasp, Leptocybe invasa
    Yipeng Liu, Letian Xu, Zhouqiong Zhang, Zongyou Huang, Dongxue Fang, Xialin Zheng, Zhende Yang, Min Lu
    Microbial Ecology.2022; 83(1): 151.     CrossRef
  • Gut Bacterial Flora of Open Nested Honeybee, Apis florea
    D. N. Ganeshprasad, Jafar K. Lone, Kunal Jani, Yogesh S. Shouche, Khalid Ali Khan, Samy Sayed, Mustafa Shukry, Showket A. Dar, Muntazir Mushtaq, A. H. Sneharani
    Frontiers in Ecology and Evolution.2022;[Epub]     CrossRef
  • Potensi Probiotik Bakteri Asam Laktat Asal Madu dari Tiga Jenis Lebah yang Berbeda
    Iffa Illiyya Fatma, Lilis Nuraida, Didah Nur Faridah
    Jurnal Teknologi dan Industri Pangan.2022; 33(2): 189.     CrossRef
  • Biodiversity of lactic acid bacteria of wild honey bee and Sumbawa horse milk by using RAPD-PCR
    A Prastyowati, A Z Mustopa, M Faiz, A B Manguntungi, Fatimah, K A Fidien
    IOP Conference Series: Earth and Environmental Science.2021; 762(1): 012001.     CrossRef
  • Amplicon Sequencing of Variable 16S rRNA from Bacteria and ITS2 Regions from Fungi and Plants, Reveals Honeybee Susceptibility to Diseases Results from Their Forage Availability under Anthropogenic Landscapes
    Aneta A. Ptaszyńska, Przemyslaw Latoch, Paul J. Hurd, Andrew Polaszek, Joanna Michalska-Madej, Łukasz Grochowalski, Dominik Strapagiel, Sebastian Gnat, Daniel Załuski, Marek Gancarz, Robert Rusinek, Patcharin Krutmuang, Raquel Martín Hernández, Mariano Hi
    Pathogens.2021; 10(3): 381.     CrossRef
  • Gut Microbiome of Two Different Honeybee Workers Subspecies In Saudi Arabia.
    Marfat Alatawy, Sanaa G. Al-Attas, Ahmad I. Assagaf, Rashad R. Al-Hindi, Khalid M. Alghamdi, Jazem A. Mahyoub, Alshehri D, Al-Amrah H, Alatawi H, Edris S, Ahmed Bahieldin
    Biosciences Biotechnology Research Asia.2021; 17(4): 659.     CrossRef
  • Foodomics in bee product research: a systematic literature review
    Ioannis Kafantaris, Grigoris D. Amoutzias, Dimitris Mossialos
    European Food Research and Technology.2021; 247(2): 309.     CrossRef
  • Honeybee Exposure to Veterinary Drugs: How Is the Gut Microbiota Affected?
    Loredana Baffoni, Daniele Alberoni, Francesca Gaggìa, Chiara Braglia, Catherine Stanton, Paul R. Ross, Diana Di Gioia, Christina A. Cuomo
    Microbiology Spectrum.2021;[Epub]     CrossRef
  • Bacterial diversity of Leptocybe invasa Fisher & La Salle (Hymenoptera: Eulophidae) from different geographical conditions in China
    Chunhui Guo, Xin Peng, Hantang Wang, Xialin Zheng, Ping Hu, Jing Zhou, Zhirou Ding, Xue Wang, Zhende Yang
    Archives of Insect Biochemistry and Physiology.2021;[Epub]     CrossRef
  • Gut Bacteria Associated With Monochamus saltuarius (Coleoptera: Cerambycidae) and Their Possible Roles in Host Plant Adaptations
    Si-Xun Ge, Feng-Ming Shi, Jia-He Pei, Ze-Hai Hou, Shi-Xiang Zong, Li-Li Ren
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Bombilactobacillus apium sp. nov., isolated from the gut of honeybee (Apis cerana)
    Jong-Pyo Kang, Yue Huo, Van-An Hoang, Dong-Uk Yang, Deok-Chun Yang, Se-Chan Kang
    Archives of Microbiology.2021; 203(5): 2193.     CrossRef
  • Bacterial Communities Associated with the Pine Wilt Disease Insect Vector Monochamus alternatus (Coleoptera: Cerambycidae) during the Larvae and Pupae Stages
    Hongjian Chen, Dejun Hao, Zhiqiang Wei, Lujie Wang, Tao Lin
    Insects.2020; 11(6): 376.     CrossRef
  • Impact of Sacbrood Virus on Larval Microbiome of Apis mellifera and Apis cerana
    Rujipas Yongsawas, Veeranan Chaimanee, Jeffery S. Pettis, Humberto Freire Boncristiani Junior, Dawn Lopez, Ammarin In-on, Panuwan Chantawannakul, Terd Disayathanoowat
    Insects.2020; 11(7): 439.     CrossRef
  • Characterization of the Kenyan Honey Bee (Apis mellifera) Gut Microbiota: A First Look at Tropical and Sub-Saharan African Bee Associated Microbiomes
    Yosef Hamba Tola, Jacqueline Wahura Waweru, Gregory D. D. Hurst, Bernard Slippers, Juan C. Paredes
    Microorganisms.2020; 8(11): 1721.     CrossRef
  • Comparison of bacterial diversity and abundance between sexes of Leptocybe invasa Fisher & La Salle (Hymenoptera: Eulophidae) from China
    Chunhui Guo, Xin Peng, Xialin Zheng, Xiaoyun Wang, Ruirui Wang, Zongyou Huang, Zhende Yang
    PeerJ.2020; 8: e8411.     CrossRef
  • BAL ARILARINDA GASTROİNTESTİNAL BAKTERİYEL FLORA
    Şengül Alpay Karaoğlu, Şeyma Suyabatmaz, Arif Bozdeveci
    Uludağ Arıcılık Dergisi.2020; 20(1): 97.     CrossRef
  • Comparative genomics of Lactobacillus species as bee symbionts and description of Lactobacillus bombintestini sp. nov., isolated from the gut of Bombus ignitus
    Jun Heo, Soo-Jin Kim, Jeong-Seon Kim, Seung-Beom Hong, Soon-Wo Kwon
    Journal of Microbiology.2020; 58(6): 445.     CrossRef
  • Different Dynamics of Bacterial and Fungal Communities in Hive-Stored Bee Bread and Their Possible Roles: A Case Study from Two Commercial Honey Bees in China
    Terd Disayathanoowat, HuanYuan Li, Natapon Supapimon, Nakarin Suwannarach, Saisamorn Lumyong, Panuwan Chantawannakul, Jun Guo
    Microorganisms.2020; 8(2): 264.     CrossRef
  • Honeybee gut microbiota dysbiosis in pesticide/parasite co-exposures is mainly induced by Nosema ceranae
    Laurianne Paris, Elodie Peghaire, Anne Moné, Marie Diogon, Didier Debroas, Frédéric Delbac, Hicham El Alaoui
    Journal of Invertebrate Pathology.2020; 172: 107348.     CrossRef
  • Structural diversity and functional variability of gut microbial communities associated with honey bees
    Khalid Ali Khan, Ahmad A. Al-Ghamdi, Hamed A. Ghramh, Mohammad Javed Ansari, Habib Ali, Saad A. Alamri, Saad Naser Al- Kahtani, Nuru Adgaba, Muhammad Qasim, Muhammad Hafeez
    Microbial Pathogenesis.2020; 138: 103793.     CrossRef
  • In Vitro Antagonistic Effect of Gut Bacteriota Isolated from Indigenous Honey Bees and Essential Oils against Paenibacillus Larvae
    Miroslava Kačániová, Margarita Terentjeva, Jana Žiarovská, Przemysław Łukasz Kowalczewski
    International Journal of Molecular Sciences.2020; 21(18): 6736.     CrossRef
  • Microbial Diversity Associated with the Pollen Stores of Captive-Bred Bumble Bee Colonies
    Prarthana S. Dharampal, Luis Diaz-Garcia, Max A. B. Haase, Juan Zalapa, Cameron R. Currie, Chris Todd Hittinger, Shawn A. Steffan
    Insects.2020; 11(4): 250.     CrossRef
  • Investigation of the gut microbiome of Apis cerana honeybees from Vietnam
    Bui Thi Thuy Duong, Nguyen Thi Kim Lien, Ha Thi Thu, Nguyen Thi Hoa, Pham Thi Lanh, Bo-Ram Yun, Mi-Sun Yoo, Yun Sang Cho, Dong Van Quyen
    Biotechnology Letters.2020; 42(11): 2309.     CrossRef
  • The honey bee gut microbiota: strategies for study and characterization
    S. Romero, A. Nastasa, A. Chapman, W. K. Kwong, L. J. Foster
    Insect Molecular Biology.2019; 28(4): 455.     CrossRef
  • Effect of transient exposure to carbaryl wettable powder on the gut microbial community of honey bees
    Kathyleen Nogrado, Seul Lee, Kyongmi Chon, Ji-Hoon Lee
    Applied Biological Chemistry.2019;[Epub]     CrossRef
  • In-hive variation of the gut microbial composition of honey bee larvae and pupae from the same oviposition time
    Zuzana Hroncova, Jiri Killer, Josef Hakl, Dalibor Titera, Jaroslav Havlik
    BMC Microbiology.2019;[Epub]     CrossRef
  • The effect of Bt Cry9Ee toxin on honey bee brood and adults reared in vitro, Apis mellifera (Hymenoptera: Apidae)
    Pingli Dai, Mengyue Wang, Lili Geng, Zhenxiong Yan, Yang Yang, Lin Guo, Shilong Ma, Qingyun Diao
    Ecotoxicology and Environmental Safety.2019; 181: 381.     CrossRef
  • Modulation of the honey bee queen microbiota: Effects of early social contact
    J. Elijah Powell, Daren Eiri, Nancy A. Moran, Juliana Rangel, Daniel E. Rozen
    PLOS ONE.2018; 13(7): e0200527.     CrossRef
  • Genome Sequences of Apibacter spp., Gut Symbionts of Asian Honey Bees
    Waldan K Kwong, Margaret I Steele, Nancy A Moran, Tal Dagan
    Genome Biology and Evolution.2018; 10(4): 1174.     CrossRef
  • The Antimicrobial Potential of Bacteria Isolated from Honey Samples Produced in the Apiaries Located in Pomeranian Voivodeship in Northern Poland
    Magdalena Pajor, Randy W. Worobo, Sławomir Milewski, Piotr Szweda
    International Journal of Environmental Research and Public Health.2018; 15(9): 2002.     CrossRef
  • The Herbicide Glyphosate Negatively Affects Midgut Bacterial Communities and Survival of Honey Bee during Larvae Reared in Vitro
    Pingli Dai, Zhenxiong Yan, Shilong Ma, Yang Yang, Qiang Wang, Chunsheng Hou, Yanyan Wu, Yongjun Liu, Qingyun Diao
    Journal of Agricultural and Food Chemistry.2018; 66(29): 7786.     CrossRef
  • Isolation of β-1,3-Glucanase-Producing Microorganisms from Poria cocos Cultivation Soil via Molecular Biology
    Qiulan Wu, Xin Dou, Qi Wang, Zhengbing Guan, Yujie Cai, Xiangru Liao
    Molecules.2018; 23(7): 1555.     CrossRef
  • Characterization of gut bacterial flora of Apis mellifera from north-west Pakistan
    Syed Ishtiaq Anjum, Abdul Haleem Shah, Muhammad Aurongzeb, Junaid Kori, M. Kamran Azim, Mohammad Javed Ansari, Li Bin
    Saudi Journal of Biological Sciences.2018; 25(2): 388.     CrossRef
  • Bacterial community composition in the salivary glands of triatomines (Hemiptera: Reduviidae)
    Michele Souza Lima, Marinella Silva Laport, Elias Seixas Lorosa, José Jurberg, Kátia Regina Netto dos Santos, Mário Alberto Cardoso da Silva Neto, Caio Tavora Coelho da Costa Rachid, Georgia Correa Atella, Luciano Andrade Moreira
    PLOS Neglected Tropical Diseases.2018; 12(9): e0006739.     CrossRef
  • Influence of Feeding Type and Nosema ceranae Infection on the Gut Microbiota of Apis cerana Workers
    Shao K. Huang, Kun T. Ye, Wei F. Huang, Bi H. Ying, Xin Su, Li H. Lin, Jiang H. Li, Yan P. Chen, Ji L. Li, Xiu L. Bao, Jian Z. Hu, Ashley Shade
    mSystems.2018;[Epub]     CrossRef
  • Bacterial communities associated with honeybee food stores are correlated with land use
    Philip Donkersley, Glenn Rhodes, Roger W. Pickup, Kevin C. Jones, Kenneth Wilson
    Ecology and Evolution.2018; 8(10): 4743.     CrossRef
  • Effects of diet type, developmental stage, and gut compartment in the gut bacterial communities of two Cerambycidae species (Coleoptera)
    Jeong Myeong Kim, Min-Young Choi, Jae-Woo Kim, Shin Ae Lee, Jae-Hyung Ahn, Jaekyeong Song, Seong-Hyun Kim, Hang-Yeon Weon
    Journal of Microbiology.2017; 55(1): 21.     CrossRef
  • Investigation of gut microbial communities associated with indigenous honey bee ( Apis mellifera jemenitica ) from two different eco-regions of Saudi Arabia
    Khalid Ali Khan, Mohammad Javed Ansari, Ahmad Al-Ghamdi, Adgaba Nuru, Steve Harakeh, Javaid Iqbal
    Saudi Journal of Biological Sciences.2017; 24(5): 1061.     CrossRef
  • Immune system stimulation by the gut symbiont Frischella perrara in the honey bee (Apis mellifera)
    Olivier Emery, Konstantin Schmidt, Philipp Engel
    Molecular Ecology.2017; 26(9): 2576.     CrossRef
  • No effect of Bt Cry1Ie toxin on bacterial diversity in the midgut of the Chinese honey bees, Apis cerana cerana (Hymenoptera, Apidae)
    Hui-Ru Jia, Ping-Li Dai, Li-Li Geng, Cameron J. Jack, Yun-He Li, Yan-Yan Wu, Qing-Yun Diao, James D. Ellis
    Scientific Reports.2017;[Epub]     CrossRef
  • Colony Collapse Disorder (CCD) and bee age impact honey bee pathophysiology
    Dennis vanEngelsdorp, Kirsten S. Traynor, Michael Andree, Elinor M. Lichtenberg, Yanping Chen, Claude Saegerman, Diana L. Cox-Foster, Guy Smagghe
    PLOS ONE.2017; 12(7): e0179535.     CrossRef
  • Honey bee gut microbial communities are robust to the fungicide Pristine® consumed in pollen
    Gloria DeGrandi-Hoffman, Vanessa Corby-Harris, Emily Watkins DeJong, Mona Chambers, Geoffrey Hidalgo
    Apidologie.2017; 48(3): 340.     CrossRef
  • Midgut bacterial communities in the giant Asian honeybee (Apis dorsata) across 4 developmental stages: A comparative study
    Prakaimuk Saraithong, Yihong Li, Kanokporn Saenphet, Zhou Chen, Panuwan Chantawannakul
    Insect Science.2017; 24(1): 81.     CrossRef
  • The Microbial Community Dynamics during the Vitex Honey Ripening Process in the Honeycomb
    Yaqin Wen, Lin Wang, Yue Jin, Jinzhen Zhang, Lei Su, Xiaoling Zhang, Jinhui Zhou, Yi Li
    Frontiers in Microbiology.2017;[Epub]     CrossRef
  • The Gut Microbiomes of Two Pachysoma MacLeay Desert Dung Beetle Species (Coleoptera: Scarabaeidae: Scarabaeinae) Feeding on Different Diets
    Philippa Z. N. Franzini, Jean-Baptiste Ramond, Clarke H. Scholtz, Catherine L. Sole, Sandra Ronca, Don A. Cowan, Robert J Forster
    PLOS ONE.2016; 11(8): e0161118.     CrossRef
  • Soil pH and electrical conductivity are key edaphic factors shaping bacterial communities of greenhouse soils in Korea
    Jeong Myeong Kim, An-Sung Roh, Seung-Chul Choi, Eun-Jeong Kim, Moon-Tae Choi, Byung-Koo Ahn, Sun-Kuk Kim, Young-Han Lee, Jae-Ho Joa, Seong-Soo Kang, Shin Ae Lee, Jae-Hyung Ahn, Jaekyeong Song, Hang-Yeon Weon
    Journal of Microbiology.2016; 54(12): 838.     CrossRef
  • The effects of Bt Cry1Ie toxin on bacterial diversity in the midgut of Apis mellifera ligustica (Hymenoptera: Apidae)
    Hui-Ru Jia, Li-Li Geng, Yun-He Li, Qiang Wang, Qing-Yun Diao, Ting Zhou, Ping-Li Dai
    Scientific Reports.2016;[Epub]     CrossRef
  • Apibacter adventoris gen. nov., sp. nov., a member of the phylum Bacteroidetes isolated from honey bees
    Waldan K. Kwong, Nancy A. Moran
    International Journal of Systematic and Evolutionary Microbiology.2016; 66(3): 1323.     CrossRef
  • Gut microbial communities of social bees
    Waldan K. Kwong, Nancy A. Moran
    Nature Reviews Microbiology.2016; 14(6): 374.     CrossRef
  • Ecological Succession in the Honey Bee Gut: Shift in Lactobacillus Strain Dominance During Early Adult Development
    Kirk E. Anderson, Pedro A. P. Rodrigues, Brendon M. Mott, Patrick Maes, Vanessa Corby-Harris
    Microbial Ecology.2016; 71(4): 1008.     CrossRef
  • Beyond 16S rRNA Community Profiling: Intra-Species Diversity in the Gut Microbiota
    Kirsten M. Ellegaard, Philipp Engel
    Frontiers in Microbiology.2016;[Epub]     CrossRef
  • Dynamics of bacterial communities in rice field soils as affected by different long-term fertilization practices
    Jae-Hyung Ahn, Shin Ae Lee, Jeong Myeong Kim, Myung-Sook Kim, Jaekyeong Song, Hang-Yeon Weon
    Journal of Microbiology.2016; 54(11): 724.     CrossRef
  • Bartonella apis sp. nov., a honey bee gut symbiont of the class Alphaproteobacteria
    Lucie Kešnerová, Roxane Moritz, Philipp Engel
    International Journal of Systematic and Evolutionary Microbiology.2016; 66(1): 414.     CrossRef
  • Extensive intra-phylotype diversity in lactobacilli and bifidobacteria from the honeybee gut
    Kirsten M Ellegaard, Daniel Tamarit, Emelie Javelind, Tobias C Olofsson, Siv GE Andersson, Alejandra Vásquez
    BMC Genomics.2015;[Epub]     CrossRef
  • Bacterial community structure in Apis florea larvae analyzed by denaturing gradient gel electrophoresis and 16S rRNA gene sequencing
    Prakaimuk Saraithong, Yihong Li, Kanokporn Saenphet, Zhou Chen, Panuwan Chantawannakul
    Insect Science.2015; 22(5): 606.     CrossRef
  • Genomics of the honey bee microbiome
    Nancy A Moran
    Current Opinion in Insect Science.2015; 10: 22.     CrossRef
  • Carpoglyphus lactis(Acari: Astigmata) from various dried fruits differed in associated micro-organisms
    J. Hubert, M. Nesvorná, J. Kopecký, M. Ságová-Marečková, P. Poltronieri
    Journal of Applied Microbiology.2015; 118(2): 470.     CrossRef
  • Characterization of gut bacteria at different developmental stages of Asian honey bees, Apis cerana
    Jun Guo, Jie Wu, Yanping Chen, Jay D. Evans, Rongguo Dai, Wenhua Luo, Jilian Li
    Journal of Invertebrate Pathology.2015; 127: 110.     CrossRef
  • Bacteria detected in the honeybee parasitic miteVarroa destructorcollected from beehive winter debris
    J. Hubert, T. Erban, M. Kamler, J. Kopecky, M. Nesvorna, S. Hejdankova, D. Titera, J. Tyl, L. Zurek
    Journal of Applied Microbiology.2015; 119(3): 640.     CrossRef
  • The Bacterium Frischella perrara Causes Scab Formation in the Gut of its Honeybee Host
    Philipp Engel, Kelsey D. Bartlett, Nancy A. Moran, Margaret J. McFall-Ngai
    mBio.2015;[Epub]     CrossRef
  • Detection of Spiroplasma melliferum in honey bee colonies in the US
    Huo-Qing Zheng, Yan Ping Chen
    Journal of Invertebrate Pathology.2014; 119: 47.     CrossRef
  • The Bacterial Communities Associated with Honey Bee (Apis mellifera) Foragers
    Vanessa Corby-Harris, Patrick Maes, Kirk E. Anderson, Nicole M. Gerardo
    PLoS ONE.2014; 9(4): e95056.     CrossRef
  • Deodorization of pig slurry and characterization of bacterial diversity using 16S rDNA sequence analysis
    Ok-Hwa Hwang, Sebastian Raveendar, Young-Ju Kim, Ji-Hun Kim, Tae-Hun Kim, Dong-Yoon Choi, Che Ok Jeon, Sung-Back Cho, Kyung-Tai Lee
    Journal of Microbiology.2014; 52(11): 918.     CrossRef
  • Hive‐stored pollen of honey bees: many lines of evidence are consistent with pollen preservation, not nutrient conversion
    Kirk E. Anderson, Mark J. Carroll, Tim Sheehan, Brendon M. Mott, Patrick Maes, Vanessa Corby‐Harris
    Molecular Ecology.2014; 23(23): 5904.     CrossRef
  • Host species and developmental stage, but not host social structure, affects bacterial community structure in socially polymorphic bees
    Quinn S. McFrederick, William T. Wcislo, Michael C. Hout, Ulrich G. Mueller
    FEMS Microbiology Ecology.2014; 88(2): 398.     CrossRef
  • Acinetobacter apis sp. nov., isolated from the intestinal tract of a honey bee, Apis mellifera
    Pil Soo Kim, Na-Ri Shin, Joon Yong Kim, Ji-Hyun Yun, Dong-Wook Hyun, Jin-Woo Bae
    Journal of Microbiology.2014; 52(8): 639.     CrossRef
  • Hidden Diversity in Honey Bee Gut Symbionts Detected by Single-Cell Genomics
    Philipp Engel, Ramunas Stepanauskas, Nancy A. Moran, Paul M. Richardson
    PLoS Genetics.2014; 10(9): e1004596.     CrossRef
  • High-grain feeding alters caecal bacterial microbiota composition and fermentation and results in caecal mucosal injury in goats
    Junhua Liu, Tingting Xu, Weiyun Zhu, Shengyong Mao
    British Journal of Nutrition.2014; 112(3): 416.     CrossRef
  • Routes of Acquisition of the Gut Microbiota of the Honey Bee Apis mellifera
    J. Elijah Powell, Vincent G. Martinson, Katherine Urban-Mead, Nancy A. Moran, H. Goodrich-Blair
    Applied and Environmental Microbiology.2014; 80(23): 7378.     CrossRef
  • Cultivable microorganisms associated with honeys of different geographical and botanical origin
    Milko Sinacori, Nicola Francesca, Antonio Alfonzo, Margherita Cruciata, Ciro Sannino, Luca Settanni, Giancarlo Moschetti
    Food Microbiology.2014; 38: 284.     CrossRef
  • Interactions between fungi and bacteria influence microbial community structure in the Megachile rotundata larval gut
    Quinn S. McFrederick, Ulrich G. Mueller, Rosalind R. James
    Proceedings of the Royal Society B: Biological Sciences.2014; 281(1779): 20132653.     CrossRef
  • Standard methods for research onApis melliferagut symbionts
    Philipp Engel, Rosalind R James, Ryuichi Koga, Waldan K Kwong, Quinn S McFrederick, Nancy A Moran
    Journal of Apicultural Research.2013; 52(4): 1.     CrossRef
  • Comprehensive Bee Pathogen Screening in Belgium Reveals Crithidia mellificae as a New Contributory Factor to Winter Mortality
    Jorgen Ravoet, Jafar Maharramov, Ivan Meeus, Lina De Smet, Tom Wenseleers, Guy Smagghe, Dirk C. de Graaf, Yi Li
    PLoS ONE.2013; 8(8): e72443.     CrossRef
  • Effects of PCR cycle number and DNA polymerase type on the 16S rRNA gene pyrosequencing analysis of bacterial communities
    Jae-Hyung Ahn, Byung-Yong Kim, Jaekyeong Song, Hang-Yeon Weon
    Journal of Microbiology.2012; 50(6): 1071.     CrossRef
Review
Potential of Bacillus velezensis as a probiotic in animal feed: a review
Fatima Khalid , Anam Khalid , Yuechi Fu , Qian Hu , Yunfang Zheng , Salman Khan , Zaigui Wang
J. Microbiol. 2021;59(7):627-633.   Published online July 1, 2021
DOI: https://doi.org/10.1007/s12275-021-1161-1
  • 742 View
  • 0 Download
  • 81 Web of Science
  • 83 Crossref
AbstractAbstract PDF
Bacillus velezensis is a plant growth-promoting bacterium that can also inhibit plant pathogens. However, based on its properties, it is emerging as a probiotic in animal feed. This review focuses on the potential characteristics of B. velezensis for use as a probiotic in the animal feed industry. The review was conducted by collecting recently published articles from peer-reviewed journals. Google Scholar and PubMed were used as search engines to access published literature. Based on the information obtained, the data were divided into three groups to discuss the (i) probiotic characteristics of B. velezensis, (ii) probiotic potential for fish, and (iii) the future potential of this species to be developed as a probiotic for the animal feed industry. Different strains of B. velezensis isolated from different sources were found to have the ability to produce antimicrobial compounds and have a beneficial effect on the gut microbiota, with the potential to be a candidate probiotic in the animal feed industry. This review provides valuable information about the characteristics of B. velezensis, which can provide researchers with a better understanding of the use of this species in the animal feed industry.

Citations

Citations to this article as recorded by  
  • Formulation of Bacillus velezensis strain PAC1 secondary metabolites-chitosan based antimicrobial surface coating for increasing the shelf life of Citrus aurantiifolia (Lime)
    Deepshikha, Ravi Ranjan Kumar, Sankhajeet Mondal, Venkatesh Chaturvedi
    Postharvest Biology and Technology.2026; 233: 114046.     CrossRef
  • Probiotic potential of intestinal bacteria isolated from the digestive tract of hybrid snakehead (Channa argus♀ × Channa maculata♂)
    Wen-Hao Wu, Yan-Xin Sun, Jia-Hao Zhang, Kun-Ming Huang, Xi-Chao Liu, Shu Tang, Wei Li, Biao Jiang, You-Lu Su
    Aquaculture.2025; 598: 742023.     CrossRef
  • Targeted Screening of Fiber Degrading Bacteria with Probiotic Function in Herbivore Feces
    Benhao Chen, Yan Zeng, Jie Wang, Mingxia Lei, Baoxing Gan, Zhiqiang Wan, Liqian Wu, Guangrong Luo, Suizhong Cao, Tianwu An, Qibin Zhang, Kangcheng Pan, Bo Jing, Xueqin Ni, Dong Zeng
    Probiotics and Antimicrobial Proteins.2025; 17(3): 1473.     CrossRef
  • Effects of Tibetan Sheep–Derived Compound Probiotics on Growth Performance, Immune Function, Intestinal Tissue Morphology, and Intestinal Microbiota in Mice
    Zifeng Gong, Guisheng Ye, Xi He, Xiaolong He
    Probiotics and Antimicrobial Proteins.2025; 17(6): 3986.     CrossRef
  • Effect of Bacillus velezensis T23 solid-state fermentation product on growth, gut and liver health, and gut microbiota of common carp (Cyprinus carpio)
    Xingyu Chen, Shubin Liu, Tsegay Teame, Jia Luo, Yao Liu, Qingwen Zhou, Qianwen Ding, Yuanyuan Yao, Yalin Yang, Chao Ran, Zhen Zhang, Zhigang Zhou
    Aquaculture.2025; 596: 741733.     CrossRef
  • Probiotic potential of Bacillus Isolates from Polish Bee Pollen and Bee Bread
    Karolina Pełka, Ahmer Bin Hafeez, Randy W. Worobo, Piotr Szweda
    Probiotics and Antimicrobial Proteins.2025; 17(1): 364.     CrossRef
  • Comprehensive Phenotypic Characterization and Genomic Analysis Unveil the Probiotic Potential of Bacillus velezensis K12
    Yingying Tang, Tian Li, Yihong Huang, Liangliang Wu, Xiaobo Liu, Ruichao Yue, Jianmin Yuan
    Animals.2025; 15(6): 798.     CrossRef
  • Effects of dietary Bacillus velezensis fermented soybean hull supplementation on antioxidant capacity, suppressing pro-inflammatory, and modulating microbiota composition in broilers
    Yung Hao Chen, Yi Chen Li, Shen Chang Chang, Min Jung Lin, Li Jen Lin, Tzu Tai Lee
    Poultry Science.2025; 104(4): 104827.     CrossRef
  • The research on the identification, taxonomy, and comparative genomics analysis of nine Bacillus velezensis strains significantly contributes to microbiology, genetics, bioinformatics, and biotechnology
    Eduarda Guimarães Sousa, Gabriela Munis Campos, Marcus Vinícius Canário Viana, Gabriel Camargos Gomes, Diego Lucas Neres Rodrigues, Flavia Figueira Aburjaile, Belchiolina Beatriz Fonseca, Max Roberto Batista de Araújo, Mateus Matiuzzi da Costa, Eric Guedo
    Frontiers in Microbiology.2025;[Epub]     CrossRef
  • Evaluation of the Probiotic Potential of Bacillus velezensis SNR14-4 Strain from Nile Tilapia Gills Using Genomic and In Vitro Approach
    Dinesh Niveditha, Madhavan Sethu, Muhammed N R Rashid, John Deepa, Hariharan Sini, Nevin Kottayath Govindan
    Ars Pharmaceutica (Internet).2025; 66(2): 152.     CrossRef
  • Genomic and metabolomic insights into the antimicrobial compounds and plant growth-promoting potential of Bacillus velezensis B115
    Jili Chen, Yuzhou Feng, Junchi Ma, Qing Zhang, Yumei Dong, Dongjie Li, Xuemei Duan, Lequn Zhou, Zhihua Li, Ying Yang, Bo Cai, Ze Liu, Jialong Yu, Bo Zhou, Tao Liu
    Scientific Reports.2025;[Epub]     CrossRef
  • Production and Characterization of Poly-γ-Glutamic Acid by Bacillus velezensis SDU
    Guangyao Guo, Han Wang, Huiyuan Jia, Haiping Ni, Shouying Xu, Cuiying Zhang, Youming Zhang, Yuxia Wu, Qiang Tu
    Microorganisms.2025; 13(4): 917.     CrossRef
  • Isolation and characterization of Bacillus velezensis YM1 and its mechanism for zearalenone degradation
    Jiangtao Feng, Xiaoyan Du, Yuying Zhang, Yuqing Xie, Yanxia Cong, Junbo He, Weinong Zhang
    LWT.2025; 224: 117810.     CrossRef
  • Effects of dietary Bacillus velezensis Y01 supplementation on growth performance, immune function, and cecal microbiota of 1 to 42 days Langya chickens
    Lumin Yu, Lingling Zhang, Shanpeng Zhang, Yuzhong Zhao, Zhihao Bi, Junye Xu, Hongcheng Fu, Xinglin Zhang
    BMC Microbiology.2025;[Epub]     CrossRef
  • Dietary Probiotic Bacillus subtilis AAHM-BS2360 and Its Postbiotic Metabolites Enhance Growth, Immunity, and Resistance to Edwardsiellosis in Pangasianodon hypophthalmus
    Nugroho Wiratama, Pakapon Meachasompop, Benchawan Kumwan, Yosapon Adisornprasert, Prapansak Srisapoome, Phornphan Phrompanya, Patcharapong Thangsunan, Pattanapong Thangsunan, Kanokporn Saenphet, Supap Saenphet, Wararut Buncharoen, Anurak Uchuwittayakul
    Antioxidants.2025; 14(6): 629.     CrossRef
  • In Silico and In Vitro Characterization of Bacillus velezensis P45: Screening for a Novel Probiotic Candidate
    Carolini Esmeriz da Rosa, Cristian Mauricio Barreto Pinilla, Luiza Dalpiccoli Toss, Adriano Brandelli
    Foods.2025; 14(13): 2334.     CrossRef
  • Probiotic Feed Additive with Microbial Beta-Carotene: Development and Properties
    Vera V. Yaderets, Natalia V. Karpova, Elena V. Glagoleva, Vakhtang V. Dzhavakhiya
    Хранение и переработка сельхозсырья.2025; 33(1): 141.     CrossRef
  • Comparative evaluation of juvenile carp reared using probiotic preparations based on different Bacillus strains
    Elena Nikolaevna Ponomareva, Marina Nikolaevna Sorokina, Vadim Grigoriev, Maria Sergeevna Mazanko, Dmitriy Vladimirovich Rudoy
    Vestnik of Astrakhan State Technical University. Series: Fishing industry.2025; 2025(2): 83.     CrossRef
  • Probiotic and postbiotic effects of Bacillus velezensis AAHM-BV2354 on boosting immunity, growth performance, antioxidant activity and resistance to Edwardsiella tarda infection in pangasius (Pangasianodon hypophthalmus)
    Nugroho Wiratama, Benchawan Kumwan, Pakapon Meachasompop, Yosapon Adisornprasert, Prapansak Srisapoome, Kim D. Thompson, Phornphan Phrompanya, Patcharapong Thangsunan, Pattanapong Thangsunan, Kanokporn Saenphet, Supap Saenphet, Wararut Buncharoen, Anurak
    Fish & Shellfish Immunology.2025; 165: 110561.     CrossRef
  • Genomic Characterization of Four Novel Probiotic Strains with Enzymatic Activity and Their Effects on Carp (Cyprinus carpio)
    Evgeniya Valeryevna Prazdnova, Maria Sergeevna Mazanko, Victoria Nikolaevna Shevchenko, Radomir Viktorovich Skripnichenko, Maksim Pavlovich Kulikov, Lilia Sergeevna Golovko, Vadim Alexeevich Grigoriev, Tatiana Alexandrovna Maltseva, Daria Borisovna Kuliko
    Animals.2025; 15(13): 1998.     CrossRef
  • A three-plasmid-containing CRISPR-Cas9 platform to engineer Bacillus velezensis 916 as an efficient biocontrol agent
    Lian Li, Kecheng Luo, Shuangyu Zhang, Xiaohua Wang, Sihan Wang, Xuehui Liu, Shanshan Zang, Yuan Liu, Changyong Zhou, Chuping Luo, Gladys Alexandre
    Applied and Environmental Microbiology.2025;[Epub]     CrossRef
  • Biocontrol potential and mechanism of Bacillus velezensis YMG-03 for sesame diseases
    Huaituo Yang, Bipo He, Xinbei Zhao, Wenqing Yan, Jing Wang, Hui Zhao, Yunxia Ni, Hongyan Liu, Chao Ma
    Physiological and Molecular Plant Pathology.2025; 140: 102880.     CrossRef
  • Dietary Supplementation with the Probiotic Bacillus velezensis BV379 Decreases Abdominal Bloating Without Perturbing the Commensal Gut Microbiota: A Randomized, Double-Blind, Placebo-Controlled Trial in Healthy Adults
    Sean M. Garvey, Traci M. Blonquist, Laura M. Brutscher, Dana M. Walsh, Valerie N. Kaden, Dawn B. Beckman, Min Zeng, Richard S. Bruno, Chad M. Cook, Jessica L. Spears
    Journal of the American Nutrition Association.2025; : 1.     CrossRef
  • Dietary supplementation with two host-associated Bacillus velezensis strains enhances growth, antioxidant, and gut health in Micropterus salmoides and Channa argus
    Haohang Zhao, Zhiwen Wang, Yiming Wen, Deyu Ning, Weifu Li, Yuhao Li, Qiangcai He, Xu Kang, Guanying Lin, Xuewen He, Meilin Zhang, Hongli Xia, Liqun Xia, Yishan Lu
    Aquaculture Reports.2025; 45: 103200.     CrossRef
  • Dietary supplementation with Bacillus velezensis and Pichia guilliermondii improves growth performance through intestinal morphology and functionality enhancement in weaning piglets
    Marcella Massimini, Gianmarco Del Vecchio, Francesca Ciaramellano, Isa Fusaro, Amilcare Barca, Mariarita Romanucci, Melania Giammarco, Chiara Amatetti, Benedetta Bachetti, Marco Di Domenico, Gianluca Nicolai, Barbara Secondini, Andrea Di Credico, Vittoria
    PLOS One.2025; 20(12): e0332920.     CrossRef
  • Endemik Tunceli Sarımsağı (Allium tuncelianum) Toprağından Bacillus velezensis İzolasyonu, Moleküler Tanımlanması ve Antimikrobiyal Özellikleri
    Altuğ Karaman, Şükran Kılıç, Halit Yücel, Ferit Can Yazdıç, Fadime Yazdıc
    Artvin Çoruh Üniversitesi Orman Fakültesi Dergisi.2025; 26(2): 370.     CrossRef
  • In Vitro Evaluation of Halotolerant Bacillus velezensis 24.5 as a Promising Probiotic with Broad-Spectrum Antimicrobial Activity
    Filofteia Camelia Diguță, Radu Cristian Toma, Florentina Matei
    Microorganisms.2025; 13(10): 2240.     CrossRef
  • A taste of one’s own medicine: Bacillus velezensis isolated from adult housefly intestines demonstrates effective fly control
    Ying Li, Shumin Wang, Dawei Yao, Kexin Zhang, Yansong Yin, Xinxin Kong, Jinxiao Li, Lingxia Zeng, Ruiling Zhang, Zhong Zhang
    Frontiers in Immunology.2025;[Epub]     CrossRef
  • Host-associated Bacillus velezensis T20 improved disease resistance and intestinal health of juvenile turbot (Scophthalmus maximus)
    Guijuan Yu, Sifan Zhao, Weihao Ou, Qinghui Ai, Wenbing Zhang, Kangsen Mai, Yanjiao Zhang
    Aquaculture Reports.2024; 35: 101927.     CrossRef
  • Draft genome sequence of Bacillus velezensis endophytically isolated from roots of Polygala paniculata
    Felipe de Paula Nogueira Cruz, Paulo Henrique Marques de Andrade, Cristina Paiva de Sousa, Paulo Teixeira Lacava, John J. Dennehy
    Microbiology Resource Announcements.2024;[Epub]     CrossRef
  • Cellulase with Bacillus velezensis improves physicochemical characteristics, microbiota and metabolites of corn germ meal during two-stage co-fermentation
    Long Chen, Yang Guo, Xin Liu, Lin Zheng, Bingdong Wei, Zijian Zhao
    World Journal of Microbiology and Biotechnology.2024;[Epub]     CrossRef
  • Biocontrol manufacturing and agricultural applications of Bacillus velezensis
    Abolfazl Keshmirshekan, Leonardo M. de Souza Mesquita, Sónia P.M. Ventura
    Trends in Biotechnology.2024; 42(8): 986.     CrossRef
  • Antagonistic Strain Bacillus velezensis JZ Mediates the Biocontrol of Bacillus altitudinis m-1, a Cause of Leaf Spot Disease in Strawberry
    Li Zhang, Zirui Liu, Yilei Pu, Boyuan Zhang, Boshen Wang, Linman Xing, Yuting Li, Yingjun Zhang, Rong Gu, Feng Jia, Chengwei Li, Na Liu
    International Journal of Molecular Sciences.2024; 25(16): 8872.     CrossRef
  • Effects of dietary supplementation with Bacillus velezensis on the growth performance, body composition, antioxidant, immune-related gene expression, and histology of Pacific white shrimp, Litopenaeus vannamei
    Arwa E. M. Abdelsamad, Rashad E. M. Said, Mona Assas, Alkhateib Y. Gaafar, Awatef H. Hamouda, Aldoushy Mahdy
    BMC Veterinary Research.2024;[Epub]     CrossRef
  • Subchronic oral toxicity assessment of Bacillus velezensis strain BV379 in sprague-dawley rats
    Mark R. Bauter, Laura M. Brutscher, Laurie C. Dolan, Jessica L. Spears
    Human & Experimental Toxicology.2024;[Epub]     CrossRef
  • Bacillus spp. as potential probiotics: promoting piglet growth by improving intestinal health
    Xiaopeng Tang, Yan Zeng, Kangning Xiong, Jinfeng Zhong
    Frontiers in Veterinary Science.2024;[Epub]     CrossRef
  • Bacillus velezensis CL197: a zearalenone detoxifying strain isolated from wheat with potential to be used in animal production
    Paloma Bianca Orso, Alberto Gonçalves Evangelista, Tiago de Melo Nazareth, Carlos Luz, Keliani Bordin, Giuseppe Meca, Fernando Bittencourt Luciano
    Veterinary Research Communications.2024; 48(6): 3847.     CrossRef
  • Screening and identification of probiotics from the intestinal tract of largemouth bass (Micropterus salmoides) for use as a feed additive and bacterial infection control
    Lu Xia, Gaofeng Cheng, Pan Wang, Xinyou Wang, Zhaoran Dong, Qingjiang Mu, Jiaqian Yu, Zhihao Jiang, Jun Xiao, Hao Feng, Xiangping Li, Weiguang Kong, Zhen Xu
    Aquaculture.2024; 584: 740661.     CrossRef
  • Optimization of Bacillus velezensis S26 sporulation for enhanced biocontrol of gray mold and anthracnose in postharvest strawberries
    Alessandra Russi, Camille Eichelberger Granada, Joséli Schwambach
    Postharvest Biology and Technology.2024; 210: 112737.     CrossRef
  • The Probiotic Potential and Metabolite Characterization of Bioprotective Bacillus and Streptomyces for Applications in Animal Production
    Alberto Gonçalves Evangelista, Tiago de Melo Nazareth, Carlos Luz, Victor Dopazo, Ana Moreno, Mario Riolo, Giuseppe Meca, Fernando Bittencourt Luciano
    Animals.2024; 14(3): 388.     CrossRef
  • Bacillus velezensis promotes the proliferation of lactic acid bacteria and influences the fermentation quality of whole-plant corn silage
    Yili Wang, Gangqing Ying, Zimo Zhang, Yu Tang, Yunhua Zhang, Lijuan Chen
    Frontiers in Plant Science.2024;[Epub]     CrossRef
  • Pig-Derived Probiotic Bacillus tequilensis YB-2 Alleviates Intestinal Inflammation and Intestinal Barrier Damage in Colitis Mice by Suppressing the TLR4/NF-κB Signaling Pathway
    Heng Yin, Chengbi Wang, Yi Shuai, Zhuoya Xie, Jingbo Liu
    Animals.2024; 14(13): 1989.     CrossRef
  • Genetic and Phenotypic Characterization of Bacillus velezensis Strain BV379 for Human Probiotic Applications
    Laura M. Brutscher, Sebhat Gebrechristos, Sean M. Garvey, Jessica L. Spears
    Microorganisms.2024; 12(3): 436.     CrossRef
  • Exploring the protective role of Bacillus velezensis BV1704–Y in zebrafish health and disease resistance against Aeromonas hydrophila infection
    Xiaozhou Qi, Fei Luo, Yilin Zhang, Gaoxue Wang, Fei Ling
    Fish & Shellfish Immunology.2024; 152: 109789.     CrossRef
  • Whole genome analysis, detoxification of ochratoxin a and physiological characterization of a novel Bacillus velezensis MM35 isolated from soil
    Fengru Xu, Mengmeng Tang, Zhihao Yang, Chengshui Liao, Zuhua Yu, Rongxian Guo, Ke Shang, Songbiao Chen, Ke Yang, Jing Li, Ke Ding, Yanyan Jia
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • A Novel Bacillus amyloliquefaciens Specifically Improving the Solubility and Antioxidant Activities of Edible Bird’s Nest
    Xin-Lin Li, Jian-Mei Lian, Xiao-Ling Chen, Qun-Yan Fan, Ying Yan, Feng-Jie Cui
    Current Microbiology.2024;[Epub]     CrossRef
  • Growth promotion on maize and whole-genome sequence analysis of Bacillus velezensis D103
    Yating Zhang, Ning Zhang, Xinyue Bi, Tong Bi, Faryal Babar Baloch, Jianjia Miao, Nan Zeng, Bingxue Li, Yingfeng An, Feng Gao
    Microbiology Spectrum.2024;[Epub]     CrossRef
  • A New Bacillus velezensis Strain CML532 Improves Chicken Growth Performance and Reduces Intestinal Clostridium perfringens Colonization
    A La Teng Zhu La, Qiu Wen, Yuxuan Xiao, Die Hu, Dan Liu, Yuming Guo, Yongfei Hu
    Microorganisms.2024; 12(4): 771.     CrossRef
  • Whole-Genome Sequencing And Characterization Of Two Bacillus velezensis Strains from Termitarium and A Comprehensive Comparative Genomic Analysis of Biosynthetic Gene Clusters
    Venkatesan Dhanalakshmi, Jeyaprakash Rajendhran
    Current Microbiology.2024;[Epub]     CrossRef
  • Dietary Bacillus velezensis T23 fermented products supplementation improves growth, hepatopancreas and intestine health of Litopenaeus vannamei
    Hongwei Yang, Dongdong Du, Qingshuang Zhang, Tsegay Teame, Anran Wang, Qiang Hao, Shubin Liu, Qianwen Ding, Yuanyuan Yao, Yalin Yang, Chao Ran, Shengkang Li, Zhen Zhang, Zhigang Zhou
    Fish & Shellfish Immunology.2024; 149: 109595.     CrossRef
  • Bacillus subtilis RBT-7/32 and Bacillus licheniformis RBT-11/17 as New Promising Strains for Use in Probiotic Feed Additives
    Vera Yaderets, Nataliya Karpova, Elena Glagoleva, Alexandra Shibaeva, Vakhtang Dzhavakhiya
    Microorganisms.2023; 11(11): 2729.     CrossRef
  • Cervicovaginal Bacillus velezensis Isolate: A Potential Probiotic and an Antagonist Against Candida and Staphylococcus
    Gulcan Sahal, Hanife Guler Donmez, Mehmet Sinan Beksac
    Current Microbiology.2023;[Epub]     CrossRef
  • Cellulolytic Bacillus Strain: Production Optimization Using Wheat Bran under Solid-State Fermentation and Investigation of Its Probiotic Potential
    Taroub Bouzaiene, Manel Ziadi, Malek Enneifer, Abir Sellami, Abdelkarim Aydi, Ameur Cherif, Moktar Hamdi
    Sustainability.2023; 15(10): 8394.     CrossRef
  • Efficient control of the fungal pathogens Colletotrichum gloeosporioides and Penicillium digitatum infecting citrus fruits by native soilborne Bacillus velezensis strains
    Tao Xuan Vu, Tram Bao Tran, Minh Binh Tran, Trang Thi Kim Do, Linh Mai Do, Mui Thi Dinh, Hanh-Dung Thai, Duc-Ngoc Pham, Van-Tuan Tran
    Heliyon.2023; 9(2): e13663.     CrossRef
  • Exploring a new technology for producing better-flavored HongJun Tofu, a traditional Neurospora-type okara food
    Yuanxin Qiu, Cungang Li, Min Xia, Hao Dong, Hairu Yuan, Shuangling Ye, Qun Wang
    LWT.2023; 180: 114700.     CrossRef
  • Riverine pollution influences the intraspecific variation in the gut microbiome of an invasive fish, Cyprinus carpio (Linn., 1758)
    Meghali Bharti, Shekhar Nagar, Ram Krishan Negi
    3 Biotech.2023;[Epub]     CrossRef
  • Whole-Genome Analysis of Termite-Derived Bacillus velezensis BV-10 and Its Application in King Grass Silage
    Xingbo Zhang, Xiaotao He, Jieru Chen, Jingtao Li, Yuhui Wu, Yu Chen, Yuhui Yang
    Microorganisms.2023; 11(11): 2697.     CrossRef
  • Butyl succinate-mediated control of Bacillus velezensis  ce 100 for apple anthracnose caused by Colletotrichum gloeosporioides
    Seo Hyun Hwang, Chaw Ei Htwe Maung, Jun Su Noh, Jeong-Yong Cho, Kil Yong Kim
    Journal of Applied Microbiology.2023;[Epub]     CrossRef
  • Nanopore Sequencing Discloses Compositional Quality of Commercial Probiotic Feed Supplements
    Worarat Kruasuwan, Piroon Jenjaroenpun, Tantip Arigul, Nipa Chokesajjawatee, Pimlapas Leekitcharoenphon, Suporn Foongladda, Thidathip Wongsurawat
    Scientific Reports.2023;[Epub]     CrossRef
  • Phenotypic characterization and genome analysis reveal the probiotic potential of a banyan endophyteBacillus velezensisK1
    Riteshri Soni, Hareshkumar Keharia, Krina Shah, Neeraj Jain
    Journal of Applied Microbiology.2023;[Epub]     CrossRef
  • Complete genome analysis of Bacillus velezensis TS5 and its potential as a probiotic strain in mice
    Benhao Chen, Yi Zhou, Lixiao Duan, Xuemei Gong, Xingmei Liu, Kangcheng Pan, Dong Zeng, Xueqin Ni, Yan Zeng
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Comparative genomic and transcriptome analysis of Bacillus velezensis CL-4 fermented corn germ meal
    Long Chen, Zihui Qu, Wei Yu, Lin Zheng, Haixin Qiao, Dan Wang, Bingdong Wei, Zijian Zhao
    AMB Express.2023;[Epub]     CrossRef
  • Dietary Bacillus velezensis R-71003 and sodium gluconate improve antioxidant capacity, immune response and resistance against Aeromonas hydrophila in common carp
    Lili Yun, Meiru Kang, Yihao Shen, Junchang Feng, Guokun Yang, Jianxin Zhang, Xiaolin Meng, Xulu Chang
    Fish & Shellfish Immunology.2023; 139: 108921.     CrossRef
  • Synbiotic Agents and Their Active Components for Sustainable Aquaculture: Concepts, Action Mechanisms, and Applications
    Vijayaram Srirengaraj, Hary L. Razafindralambo, Holy N. Rabetafika, Huu-Thanh Nguyen, Yun-Zhang Sun
    Biology.2023; 12(12): 1498.     CrossRef
  • Isolation and Screening of Antagonistic Endophytes against Phytophthora infestans and Preliminary Exploration on Anti-oomycete Mechanism of Bacillus velezensis 6-5
    Jiaomei Zhang, Xiaoqing Huang, Yuqin Hou, Xiangning Xia, Zhiming Zhu, Airong Huang, Shun Feng, Peihua Li, Lei Shi, Pan Dong
    Plants.2023; 12(4): 909.     CrossRef
  • Animal Microbiomes as a Source of Novel Antibiotic-Producing Strains
    Margarita N. Baranova, Ekaterina A. Pilipenko, Alexander G. Gabibov, Stanislav S. Terekhov, Ivan V. Smirnov
    International Journal of Molecular Sciences.2023; 25(1): 537.     CrossRef
  • Identification of a Novel Bacillus velezensis IS-6 Nudix Hydrolase Nh-9 Involved in Ochratoxin A Detoxification by Transcriptomic Profiling and Functional Verification
    Israt Jahan, Bowen Tai, Junning Ma, Sarfaraz Hussain, Haolan Du, Ling Guo, Gang Wang, Tosin Victor Adegoke, Longxue Ma, Fuguo Xing
    Journal of Agricultural and Food Chemistry.2023; 71(26): 10155.     CrossRef
  • Potential Probiotic Acceptability of a Novel Strain of Paenibacillus konkukensis SK 3146 and Its Dietary Effects on Growth Performance, Intestinal Microbiota, and Meat Quality in Broilers
    Seung-Gyu Moon, Damini Kothari, Woo-Do Lee, Jong-Il Kim, Kyung-Il Kim, Yong-Gi Kim, Gun-Whi Ga, Eun-Jip Kim, Soo-Ki Kim
    Animals.2022; 12(11): 1471.     CrossRef
  • Antibacterial Activity of Two Metabolites Isolated From Endophytic Bacteria Bacillus velezensis Ea73 in Ageratina adenophora
    Zhihua Ren, Lei Xie, Samuel Kumi Okyere, Juan Wen, Yinan Ran, Xiang Nong, Yanchun Hu
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Dynamic analysis of physicochemical characteristics and microbial communities of Aspergillus-type douchi during fermentation
    Panwen Zhang, Hao Li, Wenpeng Zhao, Kai Xiong, He Wen, Huilin Yang, Xiaolan Wang
    Food Research International.2022; 153: 110932.     CrossRef
  • Metagenomic insights to understand the role of polluted river Yamuna in shaping the gut microbial communities of two invasive fish species
    Meghali Bharti, Shekhar Nagar, Himani Khurana, Ram Krishan Negi
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Bacillus velezensis MT9 and Pseudomonas chlororaphis MT5 as biocontrol agents against citrus sooty mold and associated insect pests
    Matteo Calcagnile, Maurizio Salvatore Tredici, Antonio Pennetta, Silvia Caterina Resta, Adelfia Talà, Giuseppe Egidio De Benedetto, Pietro Alifano
    Biological Control.2022; 176: 105091.     CrossRef
  • Comparative Genome Analysis Reveals Phylogenetic Identity of Bacillus velezensis HNA3 and Genomic Insights into Its Plant Growth Promotion and Biocontrol Effects
    Doaa S. Zaid, Shuyun Cai, Chang Hu, Ziqi Li, Youguo Li, Jeffrey A. Gralnick
    Microbiology Spectrum.2022;[Epub]     CrossRef
  • The safety and technological properties of Bacillus velezensis DMB06 used as a starter candidate were evaluated by genome analysis
    Hong-Eun Na, Sojeong Heo, Yoon-Su Kim, Tao Kim, Gawon Lee, Jong-Hoon Lee, Do-Won Jeong
    LWT.2022; 161: 113398.     CrossRef
  • Structural and genetic insights into a poly-γ-glutamic acid with in vitro antioxidant activity of Bacillus velezensis VCN56
    Ngoc Tung Quach, Thi Hanh Nguyen Vu, Thi Thu An Nguyen, Hoang Ha, Phu-Ha Ho, Son Chu-Ky, Lan-Huong Nguyen, Hai Van Nguyen, Thi Thu Thuy Thanh, Ngoc Anh Nguyen, Hoang Ha Chu, Quyet-Tien Phi
    World Journal of Microbiology and Biotechnology.2022;[Epub]     CrossRef
  • Autoclaved Diet with Inactivated Spores of Bacillus spp. Decreased Reproductive Performance of Muc2−/− and Muc2+/− Mice
    Maryana V. Morozova, Galina V. Kalmykova, Nadezhda I. Akulova, Yuriy V. Ites, Valentina I. Korkina, Ekaterina A. Litvinova
    Animals.2022; 12(18): 2399.     CrossRef
  • Comparative genomics analysis of Bacillus velezensis LOH112 isolated from a nonagenarian provides insights into its biocontrol and probiotic traits
    Zhenhuang Ge, Zhiqi Kuang, Jiahao Chen, Junyi Chen, Tianhao Liu, Zhigang She, Yongjun Lu
    Gene.2022; 835: 146644.     CrossRef
  • Fermentation of NaHCO3-treated corn germ meal by Bacillus velezensis CL-4 promotes lignocellulose degradation and nutrient utilization
    Long Chen, Wanying Chen, Boyu Zheng, Wei Yu, Lin Zheng, Zihui Qu, Xiaogang Yan, Bingdong Wei, Zijian Zhao
    Applied Microbiology and Biotechnology.2022; 106(18): 6077.     CrossRef
  • Suppression of Grape White Rot Caused by Coniella vitis Using the Potential Biocontrol Agent Bacillus velezensis GSBZ09
    Xiangtian Yin, Tinggang Li, Xilong Jiang, Xiaoning Tang, Jiakui Zhang, Lifang Yuan, Yanfeng Wei
    Pathogens.2022; 11(2): 248.     CrossRef
  • Effects of Dietary Bacillus velezensis LSG2-5 on Growth, Immunity, Antioxidant Capacity, and Disease Resistance of Amur minnow (Rhynchocypris lagowskii Dybowski)
    Yurou Zhang, Mengnan Yu, Lili Lin, Jiajing Wang, Dongming Zhang, Qiuju Wang, Mahmoud M. Elsadek, Guiqin Wang, Qi Yao, Yuke Chen, Zhixin Guo, Xiangjun Leng
    Aquaculture Nutrition.2022; 2022: 1.     CrossRef
  • In Vivo Efficacy of Bacillus velezensis Isolated from Korean Gochang Bokbunja Vinegar against Carbapenem-Resistant Klebsiella pneumoniae Infections
    Fatemeh Ghorbanian, Hoonhee Seo, Hanieh Tajdozian, Youngkyoung Lee, MD Abdur Rahim, Sukyung Kim, Il-Yun Jung, Saebim Lee, Ho-Yeon Song
    Polish Journal of Microbiology.2022; 71(4): 553.     CrossRef
  • Analysis of the probiotic activity of Bacillus velezensis RT-26 strain isolated from reindeer rumen by whole-genome sequencing
    L.A. Ilina, V.A. Filippova, E.S. Ponomareva, E.A. Brazhnik, T.P. Dunyashev, K.A. Laishev, S. Eliseeva, E.A. Vatskel
    BIO Web of Conferences.2022; 48: 03002.     CrossRef
  • Antimicrobial Effects of Potential Probiotics of Bacillus spp. Isolated from Human Microbiota: In Vitro and In Silico Methods
    Alfonso Torres-Sánchez, Jesús Pardo-Cacho, Ana López-Moreno, Ángel Ruiz-Moreno, Klara Cerk, Margarita Aguilera
    Microorganisms.2021; 9(8): 1615.     CrossRef
Journal Article
Cecal microbiome divergence of broiler chickens by sex and body weight
Kyu-Chan Lee , Dong Yong Kil , Woo Jun Sul
J. Microbiol. 2017;55(12):939-945.   Published online December 7, 2017
DOI: https://doi.org/10.1007/s12275-017-7202-0
  • 433 View
  • 0 Download
  • 83 Crossref
AbstractAbstract PDF
The divergence of gut bacterial community on broiler chickens has been reported as potentially possible keys to enhancing nutrient absorption, immune systems, and increasing poultry health and performance. Thus, we compared cecal bacterial communities and functional predictions by sex and body weight regarding the association between cecal microbiota and chicken growth performance. In this study, a total of 12 male and 12 female 1-day-old broiler chickens were raised for 35 days in 2 separate cages. Chickens were divided into 3 subgroups depending on body weight (low, medium, and high) by each sex. We compared chicken cecal microbiota compositions and its predictive functions by sex and body weight difference. We found that bacterial 16S rRNA genes were classified as 3 major phyla (Bacteroidetes, Firmicutes, and Proteobacteria), accounting for > 98% of the total bacterial community. The profiling of different bacterial taxa and predictive metagenome functions derived from 16S rRNA genes were performed over chicken sex and bodyweight. Male chickens were related to the enrichment of Bacteroides while female chickens were to the enrichment of Clostridium and Shigella. Male chickens with high body weight were associated with the enrichment of Faecalibacterium and Shuttleworthia. Carbohydrate and lipid metabolisms were suggested as candidate functions for weight gain in the males. This suggests that the variation of cecal bacterial communities and their functions by sex and body weight may be associated with the differences in the growth potentials of broiler chickens.

Citations

Citations to this article as recorded by  
  • Anticoccidial activities of a multicomplex mineral-based diet in broilers infected with Eimeria acervulina
    Binh T. Nguyen, Rochelle A. Flores, Paula Leona T. Cammayo-Fletcher, Suk Kim, Woo H. Kim, Wongi Min
    Parasites, Hosts and Diseases.2025; 63(2): 135.     CrossRef
  • Multi-omics analyses reveal differences in intestinal flora composition and serum metabolites in Cherry Valley broiler ducks of different body weights
    Hongjiao Wang, Long Li, Jinhai Wu, Xuefeng Yuan, Liang Hong, Lei Pu, Shunyi Qin, Liuan Li, Hua Yang, Jianbin Zhang
    Poultry Science.2025; 104(8): 105275.     CrossRef
  • Impact of stocking densities on growth, organ index, serum biochemistry, gut morphology and microbiota of young ducks in a rice-duck-crayfish coculture system
    Xiao Long He, Zhen Hua Liang, Ze Heng Huang, Lian Bing Qi, Yan Wu, Jia Liu, Tao Huang, Jing Bo Liu, Jin Song Pi, Hao Zhang
    Animal Bioscience.2025; 38(5): 1067.     CrossRef
  • Niacin mitigates heat stress-induced reduction in performance of Taihe black-boned silky fowl through modulation of gut microorganisms and short-chain fatty acids
    Wenliang Mei, Chuanbin Chen, Xiaona Gao, Wenyan Zhang, Ziyu Hu, Mingren Qu, Gen Wan, Lanjiao Xu
    Frontiers in Veterinary Science.2025;[Epub]     CrossRef
  • Impact of attapulgite loaded with essential oil in diets on the growth performance and gut microbiota of broilers: a correlation analysis
    Changqing He, Hanxiang Du, Lingyun He, Yi Liu, Jing Shan, Xiangyong Qu, Songchang Guo, Meichun Li, Jia Tang
    Italian Journal of Animal Science.2025; 24(1): 1155.     CrossRef
  • Effects of purple corn anthocyanin on slaughter performance, immune function, the caecal microbiota and the transcriptome in chickens
    Xingzhou Tian, Chao Ban, Di Zhou, Hui Li, Jiaxuan Li, Xu Wang, Qi Lu
    Poultry Science.2025; 104(6): 105104.     CrossRef
  • Impact of Chlorella vulgaris and probiotic supplementation on performance, immunity and intestinal microbiota of broiler chickens
    Verena Pereira Dinalli, Marcio Carvalho Costa, Emerson José Venâncio, João Antônio Barbosa Filho, José Antônio Bessegatto, Augusto Tasch Holkem, Amauri Alcindo Alfieri, Caio Abercio da Silva, Alexandre Oba, Arda Yildirim
    PLOS ONE.2025; 20(1): e0313736.     CrossRef
  • Gut response to the dietary supplementation with sodium butyrate in broiler chickens: morphology and microbiota composition and predictive functional groups
    Giulia Zardinoni, Almudena Huerta, Marija Boskovic Cabrol, Angela Trocino, Elisa Fonsatti, Cristina Ballarin, Martina Bortoletti, Marco Birolo, Francesco Bordignon, Piergiorgio Stevanato, Daniel Julian, Gerolamo Xiccato
    Italian Journal of Animal Science.2025; 24(1): 123.     CrossRef
  • Red seaweed Chondracanthus chamissoi supplementation improved the growth performance of broiler chickens partially through effects on intestinal morphology and cecal microbiota
    O.S. Olowe, T. Johnson, O. Adeola
    Poultry Science.2025; 104(9): 105402.     CrossRef
  • Fecal microbiota transplantation improves Sansui duck growth performance by balancing the cecal microbiome
    Yong Yue, Bingnong Yao, Fuyou Liao, Zhiqiang He, Papungkorn Sangsawad, Shenglin Yang
    Scientific Reports.2025;[Epub]     CrossRef
  • Breast muscle myopathies: twists and turns in modern broilers
    Elizabeth S. Greene, Sunoh Che, Francesca Soglia, Tomohito Iwasaki, Takafumi Watanabe, Takeshi Kawasaki, Leonardo Susta, Massimiliano Petracci, Colin Scanes, Sami Dridi
    Avian Pathology.2025; 54(6): 669.     CrossRef
  • Broiler chickens’ responses to a diet incorporating fermented or unfermented palm kernel cake on intestinal morphology, antioxidant indices, caecal microbiota composition, and liver metabolomic profiles
    Sindaye Daniel, Shehata Zeid, Liao Jinghong, Suqin Hang
    Italian Journal of Animal Science.2025; : 1.     CrossRef
  • Dietary ethylenediamine dihydroiodide mitigated Escherichia coli O78-induced immune and intestinal damage of ducks via suppression of NF-κB signal
    Yanru Liang, Yaqi Chang, Yueqin Xie, Qinteng Hou, Hua Zhao, Guangmang Liu, Xiaoling Chen, Gang Tian, Jingyi Cai, Gang Jia
    Poultry Science.2024; 103(5): 103610.     CrossRef
  • The effect of sex and dietary crude protein level on nutrient transporter gene expression and cecal microbiota populations in broiler chickens
    Ashley D. England, Sara de las Heras-Saldana, Kosar Gharib-Naseri, Sarbast K. Kheravii, Shu-Biao Wu
    Poultry Science.2024; 103(2): 103268.     CrossRef
  • Morphological features of the feral pigeon’s (Columba livia f. urbana) digestive system
    I. O. Кolomak
    Journal for Veterinary Medicine, Biotechnology and Biosafety.2024; 10(1): 7.     CrossRef
  • Microbial community profiling in intestinal tract of indigenous chickens from different villages
    Mokoma Eunice Mootane, Thendo Mafuna, Tondani Madeleine Ramantswana, Dikeledi Petunia Malatji
    Scientific Reports.2024;[Epub]     CrossRef
  • The Effect of including a Mixed-Enzyme Product in Broiler Diets on Performance, Metabolizable Energy, Phosphorus and Calcium Retention
    Harriet Walker, Suvi Vartiainen, Juha Apajalahti, Jules Taylor-Pickard, Ivana Nikodinoska, Colm A. Moran
    Animals.2024; 14(2): 328.     CrossRef
  • Integrating microbial 16S rRNA sequencing and non-targeted metabolomics to reveal sexual dimorphism of the chicken cecal microbiome and serum metabolome
    Yongxian Yang, Fuping Zhang, Xuan Yu, Liqi Wang, Zhong Wang
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • Dynamic effects of black soldier fly larvae meal on the cecal bacterial microbiota and prevalence of selected antimicrobial resistant determinants in broiler chickens
    Calvin Ho-Fung Lau, Sabrina Capitani, Yuan-Ching Tien, Lou Ann Verellen, Munene Kithama, Hellen Kang, Elijah G. Kiarie, Edward Topp, Moussa S. Diarra, Michael Fruci
    Animal Microbiome.2024;[Epub]     CrossRef
  • Assessing the impact of hatching system and body weight on the growth performance, caecal short-chain fatty acids, and microbiota composition and functionality in broilers
    Muhammad Zeeshan Akram, Ester Arévalo Sureda, Luke Comer, Matthias Corion, Nadia Everaert
    Animal Microbiome.2024;[Epub]     CrossRef
  • Are there consistent effects of gut microbiota composition on performance, productivity and condition in poultry?
    Kateřina Marková, Jakub Kreisinger, Michal Vinkler
    Poultry Science.2024; 103(6): 103752.     CrossRef
  • Sex‐specific genetic parameter estimates of body weight in Mazandaran indigenous chickens
    Mohammad Esmaeili, Mohsen Gholizadeh, Hasan Hafezian, Ayoub Farhadi
    Journal of Animal Breeding and Genetics.2024; 141(4): 465.     CrossRef
  • A catalog of microbial genes and metagenome-assembled genomes from the quail gut microbiome
    Xinwei Xiong, Yousheng Rao, Jinge Ma, Zhangfeng Wang, Qin He, Jishang Gong, Wentao Sheng, Jiguo Xu, Xuenong Zhu, Yuwen Tan, Yanbei Yang
    Poultry Science.2023; 102(10): 102931.     CrossRef
  • Plant essential oils improve growth performance by increasing antioxidative capacity, enhancing intestinal barrier function, and modulating gut microbiota in Muscovy ducks
    Chaoyue Ge, Xinyu Luo, Lianchi Wu, Yujie Lv, Zhaoying Hu, Dongyou Yu, Bing Liu
    Poultry Science.2023; 102(8): 102813.     CrossRef
  • The Development of Gut Microbiota and Its Changes Following C. jejuni Infection in Broilers
    Walid Ghazi Al Hakeem, Keila Y. Acevedo Villanueva, Ramesh K. Selvaraj
    Vaccines.2023; 11(3): 595.     CrossRef
  • Growing Patterns of the Branca Chicken Breed—Concentrate vs. Maize-Based Diet
    Laura Soares, Fernando Mata, Joaquim L. Cerqueira, José Araújo
    Agriculture.2023; 13(12): 2282.     CrossRef
  • Regulation of poultry lipid metabolism by dietary fibre: a review
    Hua Zhou, Lei Yang, Tiande Zou, Qiufen Li, Mingren Qu, Jingming You, Guanhong Li
    World's Poultry Science Journal.2023; 79(3): 485.     CrossRef
  • Effect of water supplementation of Magic oil at different growing periods on growth performance, carcass traits, blood biochemistry, and ileal histomorphology of broiler chickens
    Elsayed O.S. Hussein, Gamaleldin M. Suliman, Abdullah N. Al-Owaimer, Hani H. Al-Baadani, Maged A. Al-Garadi, Hani A. Ba-Awadh, Mohammed M. Qaid, Ayman A. Swelum
    Poultry Science.2023; 102(8): 102775.     CrossRef
  • Versatile, vigilance, and gut microbiome support the priority of high-ranking hens
    Zhijiang Xie, Limin Xing, Mengqiao Zhao, Lei Zhao, Jinling Liu, Yushan Li, Jiankang Gan, Siyu Chen, Hua Li
    Frontiers in Veterinary Science.2023;[Epub]     CrossRef
  • Anaerobutyricum and Subdoligranulum Are Differentially Enriched in Broilers with Disparate Weight Gains
    Jing Liu, Kelsy Robinson, Wentao Lyu, Qing Yang, Jing Wang, Karen D. Christensen, Guolong Zhang
    Animals.2023; 13(11): 1834.     CrossRef
  • Inonotus obliquus polysaccharide are linear molecules that alter the abundance and composition of intestinal microbiota in Sprague Dawley rats
    Songqing Liu, Wenjing Zhou, Xin Deng, Wei Jiang, Yanping Wang, Jiasui Zhan, Binhong Hu
    Frontiers in Nutrition.2023;[Epub]     CrossRef
  • Host genotype affects endotoxin release in excreta of broilers at slaughter age
    F. Marcato, J. M. J. Rebel, S. K. Kar, I. M. Wouters, D. Schokker, A. Bossers, F. Harders, J. W. van Riel, M. Wolthuis-Fillerup, I. C. de Jong
    Frontiers in Genetics.2023;[Epub]     CrossRef
  • Phenotype Alterations in the Cecal Ecosystem Involved in the Asymptomatic Intestinal Persistence of Paratyphoid Salmonella in Chickens
    Michael H. Kogut, Mariano Enrique Fernandez Miyakawa
    Animals.2023; 13(18): 2824.     CrossRef
  • Long-Term Dietary Fish Meal Substitution with the Black Soldier Fly Larval Meal Modifies the Caecal Microbiota and Microbial Pathway in Laying Hens
    Junliang Zhao, Takuma Ban, Hironori Miyawaki, Hirofumi Hirayasu, Akihisa Izumo, Shun-ichiro Iwase, Koji Kasai, Kiyonori Kawasaki
    Animals.2023; 13(16): 2629.     CrossRef
  • Sex-based responses of heat stress and subsequent recovery on the growth performance, metabolic changes, and redox status of broilers at market age
    Ding Jinxue, Sun Shiang, Song Kai, Xiong Yongjie, He Shaojun
    International Journal of Biometeorology.2023; 67(10): 1669.     CrossRef
  • Dietary fiber modulates abdominal fat deposition associated with cecal microbiota and metabolites in yellow chickens
    Xiaoyan Cui, Zhongyong Gou, Zongyong Jiang, Long Li, Xiajing Lin, Qiuli Fan, Yibing Wang, Shouqun Jiang
    Poultry Science.2022; 101(4): 101721.     CrossRef
  • Microbiota and Transcriptomic Effects of an Essential Oil Blend and Its Delivery Route Compared to an Antibiotic Growth Promoter in Broiler Chickens
    Samson Oladokun, K. Fraser Clark, Deborah I. Adewole
    Microorganisms.2022; 10(5): 861.     CrossRef
  • Effect of stocking density on performance, meat quality and cecal bacterial communities of yellow feather broilers
    Laidi Wang, Lingling Kong, Xiaodan Hu, Hao Bai, Zhixiu Wang, Yong Jiang, Yulin Bi, Guobin Chang, Guohong Chen
    Animal Biotechnology.2022; 33(6): 1322.     CrossRef
  • Potential Probiotics Role in Excluding Antibiotic Resistance
    Irfan Ahmed, Zhengtian Li, Sharoon Shahzad, Saima Naveed, Ahmad Kamran Khan, Ayesha Ahmed, Zahid Kamran, Muhammad Yousaf, Shakeel Ahmad, Gulnaz Afzal, Hafiz Ishfaq Ahmad, Nasim Ahmad Yasin, Junjing Jia, Mubashir Hussain, Shahzad Munir, Ali Akbar
    Journal of Food Quality.2022; 2022: 1.     CrossRef
  • Delayed access to feed early post-hatch affects the development and maturation of gastrointestinal tract microbiota in broiler chickens
    Monika Proszkowiec-Weglarz, Katarzyna B. Miska, Laura E. Ellestad, Lori L. Schreier, Stanislaw Kahl, Nadia Darwish, Philip Campos, Jonathan Shao
    BMC Microbiology.2022;[Epub]     CrossRef
  • Effect of Two Soybean Varieties Treated with Different Heat Intensities on Ileal and Caecal Microbiota in Broiler Chickens
    Florian Hemetsberger, Benjamin Zwirzitz, Nadia Yacoubi, Wolfgang Kneifel, Karl Schedle, Konrad J. Domig
    Animals.2022; 12(9): 1109.     CrossRef
  • Comparison of organic acids supplementation on the growth performance, intestinal characteristics and morphology, and cecal microflora in broilers fed corn-soybean meal diet
    Hao Yang Sun, Hong Bin Zhou, Yang Liu, Yue Wang, Cheng Zhao, Liang Mei Xu
    Animal Bioscience.2022; 35(11): 1689.     CrossRef
  • Centennial Review: Factors affecting the chicken gastrointestinal microbial composition and their association with gut health and productive performance
    Yugal Raj Bindari, Priscilla F. Gerber
    Poultry Science.2022; 101(1): 101612.     CrossRef
  • A carvacrol-based product reduces Campylobacter jejuni load and alters microbiota composition in the caeca of chickens
    Marion Allaoua, Elsa Bonnafé, Pierre Etienne, Virginie Noirot, Jean-François Gabarrou, Adrien Castinel, Géraldine Pascal, Vincent Darbot, Michel Treilhou, Sylvie Combes
    Journal of Applied Microbiology.2022; 132(6): 4501.     CrossRef
  • The replacement of bacitracin methylene disalicylate with Bacillus subtilis PB6 in the diet of male Cherry Valley Ducks reduces the feed conversion ratio by improving intestinal health and modulating gut microbiota
    Qianqian Zhang, Jian Li, Guixiang Wang, Lizhi Wang, Zhiming Zhang, Zhengfeng Fang, Yan Lin, Shengyu Xu, Bin Feng, Yong Zhuo, Lun Hua, Xuemei Jiang, Xilun Zhao, De Wu, Lianqiang Che
    Poultry Science.2022; 101(11): 102155.     CrossRef
  • Novel strategies to improve chicken performance and welfare by unveiling host-microbiota interactions through hologenomics
    Núria Tous, Sofia Marcos, Farshad Goodarzi Boroojeni, Ana Pérez de Rozas, Jürgen Zentek, Andone Estonba, Dorthe Sandvang, M. Thomas P. Gilbert, Enric Esteve-Garcia, Robert Finn, Antton Alberdi, Joan Tarradas
    Frontiers in Physiology.2022;[Epub]     CrossRef
  • Role of Physiology, Immunity, Microbiota, and Infectious Diseases in the Gut Health of Poultry
    Samiru S. Wickramasuriya, Inkyung Park, Kyungwoo Lee, Youngsub Lee, Woo H. Kim, Hyoyoun Nam, Hyun S. Lillehoj
    Vaccines.2022; 10(2): 172.     CrossRef
  • The avian gut microbiota: Diversity, influencing factors, and future directions
    Fengfei Sun, Junfeng Chen, Kai Liu, Meizhen Tang, Yuewei Yang
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • A Probabilistic Structural Equation Model to Evaluate Links between Gut Microbiota and Body Weights of Chicken Fed or Not Fed Insect Larvae
    Johann Detilleux, Nassim Moula, Edwin Dawans, Bernard Taminiau, Georges Daube, Pascal Leroy
    Biology.2022; 11(3): 357.     CrossRef
  • Feed Safety and the Development of Poultry Intestinal Microbiota
    Dragana Stanley, Yadav Sharma Bajagai
    Animals.2022; 12(20): 2890.     CrossRef
  • Factors Affecting Breast Myopathies in Broiler Chickens and Quality of Defective Meat: A Meta-Analysis
    Francesco Bordignon, Gerolamo Xiccato, Marija Boskovic Cabrol, Marco Birolo, Angela Trocino
    Frontiers in Physiology.2022;[Epub]     CrossRef
  • Effects of therapeutic levels of dietary antibiotics on the cecal microbiome composition of broiler chickens
    Seyed Hossien Kairmi, Khaled Taha-Abdelaziz, Alexander Yitbarek, Mehdi Sargolzaei, Heidi Spahany, Jake Astill, Bahram Shojadoost, Mohammadali Alizadeh, Raveendra R. Kulkarni, John Parkinson, Shayan Sharif
    Poultry Science.2022; 101(6): 101864.     CrossRef
  • Taxonomic and predicted functional signatures reveal linkages between the rumen microbiota and feed efficiency in dairy cattle raised in tropical areas
    Priscila Fregulia, Mariana Magalhães Campos, Roberto Júnio Pedroso Dias, Junhong Liu, Wei Guo, Luiz Gustavo Ribeiro Pereira, Marco Antônio Machado, Daniele Ribeiro de Lima Reis Faza, Le Luo Guan, Phil C. Garnsworthy, André Luis Alves Neves
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Effect of Salmonella Typhimurium Colonization on Microbiota Maturation and Blood Leukocyte Populations in Broiler Chickens
    Kelsy Robinson, Anna L. F. V. Assumpcao, Komala Arsi, Gisela F. Erf, Annie Donoghue, Palmy R. R. Jesudhasan
    Animals.2022; 12(20): 2867.     CrossRef
  • Caecal microbial communities, functional diversity, and metabolic pathways in Ross 308 broiler chickens fed with diets containing different levels of Marama (Tylosema esculentum) bean meal
    Peter Kotsoana Montso, Caven Mguvane Mnisi, Ayansina Segun Ayangbenro
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Microbiota populations and short-chain fatty acids production in cecum of immunosuppressed broilers consuming diets containing γ-irradiated Astragalus polysaccharides
    Y.S. Liu, S. Li, X.F. Wang, T. Xing, J.L. Li, X.D. Zhu, L. Zhang, F. Gao
    Poultry Science.2021; 100(1): 273.     CrossRef
  • Effects of Clostridium butyricum, Sodium Butyrate, and Butyric Acid Glycerides on the Reproductive Performance, Egg Quality, Intestinal Health, and Offspring Performance of Yellow-Feathered Breeder Hens
    Yibing Wang, Yang Wang, Xiajing Lin, Zhongyong Gou, Qiuli Fan, Shouqun Jiang
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • The link between broiler flock heterogeneity and cecal microbiome composition
    Randi Lundberg, Christian Scharch, Dorthe Sandvang
    Animal Microbiome.2021;[Epub]     CrossRef
  • Changes in the ceca microbiota of broilers vaccinated for coccidiosis or supplemented with salinomycin
    C. Orso, T.B. Stefanello, C.H. Franceschi, M.B. Mann, A.P.M. Varela, I.M.S. Castro, J. Frazzon, A.P.G. Frazzon, I. Andretta, A.M.L. Ribeiro
    Poultry Science.2021; 100(4): 100969.     CrossRef
  • Highly Fermentable Fiber Alters Fecal Microbiota and Mitigates Swine Dysentery Induced by Brachyspira hyodysenteriae
    Emma T. Helm, Nicholas K. Gabler, Eric. R. Burrough
    Animals.2021; 11(2): 396.     CrossRef
  • Sex differences in growth performance are related to cecal microbiota in chicken
    Lei Cui, Xiaolong Zhang, Ranran Cheng, Abdur Rahman Ansari, Abdelmotaleb A. Elokil, Yafang Hu, Yan Chen, Abdallah A. Nafady, Huazhen Liu
    Microbial Pathogenesis.2021; 150: 104710.     CrossRef
  • Metagenomic Analysis Identifies Sex-Related Cecal Microbial Gene Functions and Bacterial Taxa in the Quail
    Jing-E Ma, Xin-Wei Xiong, Ji-Guo Xu, Ji-Shang Gong, Jin Li, Qiao Xu, Yuan-Fei Li, Yang-Bei Yang, Min Zhou, Xue-Nong Zhu, Yu-Wen Tan, Wen-Tao Sheng, Zhang-Feng Wang, Xu-Tang Tu, Cheng-Yao Zeng, Xi-Quan Zhang, You-Sheng Rao
    Frontiers in Veterinary Science.2021;[Epub]     CrossRef
  • The digestive and reproductive tract microbiotas and their association with body weight in laying hens
    Yuan Su, Yile Ge, Zhongxian Xu, Dejing Zhang, Diyan Li
    Poultry Science.2021; 100(11): 101422.     CrossRef
  • Factors Influencing the Succession of the Fecal Microbiome in Broilers
    Dirkjan Schokker, Britt de Klerk, Randy Borg, Alex Bossers, Johanna M.J. Rebel
    Livestock Science.2021; 247: 104486.     CrossRef
  • Effects of Xylanase in Corn- or Wheat-Based Diets on Cecal Microbiota of Broilers
    Jian Wang, Heng Cao, Chengling Bao, Yajing Liu, Bing Dong, Chunlin Wang, Zhenda Shang, Yunhe Cao, Suozhu Liu
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Effects of rearing system (floor vs. cage) and sex on performance, meat quality and enteric microorganism of yellow feather broilers
    Lai-di WANG, Yang ZHANG, Ling-ling KONG, Zhi-xiu WANG, Hao BAI, Yong JIANG, Yu-lin BI, Guo-bin CHANG, Guo-hong CHEN
    Journal of Integrative Agriculture.2021; 20(7): 1907.     CrossRef
  • A reasonable correlation between cloacal and cecal microbiomes in broiler chickens
    Nadia A. Andreani, Caroline J. Donaldson, Matthew Goddard
    Poultry Science.2020; 99(11): 6062.     CrossRef
  • Green Tea and Pomegranate Extract Administered During Critical Moments of the Production Cycle Improves Blood Antiradical Activity and Alters Cecal Microbial Ecology of Broiler Chickens
    Vera Perricone, Marcello Comi, Carlotta Giromini, Raffaella Rebucci, Alessandro Agazzi, Giovanni Savoini, Valentino Bontempo
    Animals.2020; 10(5): 785.     CrossRef
  • Respiratory and Gut Microbiota in Commercial Turkey Flocks with Disparate Weight Gain Trajectories Display Differential Compositional Dynamics
    Kara J. M. Taylor, John M. Ngunjiri, Michael C. Abundo, Hyesun Jang, Mohamed Elaish, Amir Ghorbani, Mahesh KC, Bonnie P. Weber, Timothy J. Johnson, Chang-Won Lee, Edward G. Dudley
    Applied and Environmental Microbiology.2020;[Epub]     CrossRef
  • Metagenomic analysis reveals linkages between cecal microbiota and feed efficiency in Xiayan chickens
    Wenya Du, Jixian Deng, Zhuliang Yang, Linghu Zeng, Xiurong Yang
    Poultry Science.2020; 99(12): 7066.     CrossRef
  • Effects of Rearing Conditions and Sex on Cecal Microbiota in Ducks
    Chunhong Zhu, Wenjuan Xu, Zhiyun Tao, Weitao Song, Hongxiang Liu, Shuangjie Zhang, Huifang Li
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Effects of Eimeria maxima and Clostridium perfringens infections on cecal microbial composition and the possible correlation with body weight gain in broiler chickens
    Mingmin Lu, Robert W. Li, Hongyan Zhao, Xianghe Yan, Hyun S. Lillehoj, Zhifeng Sun, SungTak Oh, Yueying Wang, Charles Li
    Research in Veterinary Science.2020; 132: 142.     CrossRef
  • Family matters: skin microbiome reflects the social group and spatial proximity in wild zebra finches
    Kathrin Engel, Helga Pankoke, Sebastian Jünemann, Hanja B. Brandl, Jan Sauer, Simon C. Griffith, Jörn Kalinowski, Barbara A. Caspers
    BMC Ecology.2020;[Epub]     CrossRef
  • Dissection of the cecal microbial community in chickens after Eimeria tenella infection
    Hong-Liang Chen, Xin-Yu Zhao, Guang-Xun Zhao, Hai-Bin Huang, Hao-Rui Li, Chun-Wei Shi, Wen-Tao Yang, Yan-Long Jiang, Jian-Zhong Wang, Li-Ping Ye, Quan Zhao, Chun-Feng Wang, Gui-Lian Yang
    Parasites & Vectors.2020;[Epub]     CrossRef
  • Dietary supplementation with fermented defatted “alperujo” induces modifications of the intestinal mucosa and cecal microbiota of broiler chickens
    Agustín Rebollada-Merino, María Ugarte-Ruiz, Marta Hernández, Pedro Miguela-Villoldo, David Abad, Pedro Cuesta-Álvaro, David Rodríguez-Lázaro, Lucía de Juan, Lucas Domínguez, Antonio Rodríguez-Bertos
    Poultry Science.2020; 99(11): 5308.     CrossRef
  • Changes in the gut microbiota mediate the differential regulatory effects of two glucose oxidases produced by Aspergillus niger and Penicillium amagasakiense on the meat quality and growth performance of broilers
    Shengru Wu, Xiaodong Chen, Taohuan Li, Hao Ren, Lixin Zheng, Xiaojun Yang
    Journal of Animal Science and Biotechnology.2020;[Epub]     CrossRef
  • Sanguinarine modulate gut microbiome and intestinal morphology to enhance growth performance in broilers
    Zhu-Ying Liu, Xiao-Long Wang, Shu-Qi Ou, De-Xing Hou, Jian-Hua He, Michael H. Kogut
    PLOS ONE.2020; 15(6): e0234920.     CrossRef
  • Characterization of heat stress affecting the growth performance, blood biochemical profile, and redox status in male and female broilers at market age
    Shaojun He, Qirun Yin, Yongjie Xiong, Jing Li, Deyi Liu
    Tropical Animal Health and Production.2020; 52(6): 3833.     CrossRef
  • Influential factors on the composition of the conventionally raised broiler gastrointestinal microbiomes
    K.M. Feye, M.F.A. Baxter, G. Tellez-Isaias, M.H. Kogut, S.C. Ricke
    Poultry Science.2020; 99(2): 653.     CrossRef
  • Genome reconstruction of a novel carbohydrate digesting bacterium from the chicken caecal microflora
    Ankit T. Hinsu, Ramesh J. Pandit, Shriram H. Patel, Androniki Psifidi, Fiona M. Tomley, Subrata K. Das, Damer P. Blake, Chaitanya G. Joshi
    Meta Gene.2019; 20: 100543.     CrossRef
  • Functioning of the Intestinal Ecosystem: From New Technologies in Microbial Research to Practical Poultry Feeding – A Review
    Zenon Zduńczyk
    Annals of Animal Science.2019; 19(2): 239.     CrossRef
  • Faecalibacterium diversity in dairy cow milk
    Keith W. Savin, Jody Zawadzki, Martin J. Auldist, Jianghui Wang, Doris Ram, Simone Rochfort, Benjamin G. Cocks, Christopher Staley
    PLOS ONE.2019; 14(8): e0221055.     CrossRef
  • Olfactory Communication via Microbiota: What Is Known in Birds?
    Öncü Maraci, Kathrin Engel, Barbara A. Caspers
    Genes.2018; 9(8): 387.     CrossRef
Research Support, Non-U.S. Gov't
Pyrosequencing-based Analysis of Fecal Microbial Communities in Three Purebred Pig Lines
Edward Alain B. Pajarillo , Jong Pyo Chae , Marilen P. Balolong , Hyeun Bum Kim , Kang-Seok Seo , Dae-Kyung Kang
J. Microbiol. 2014;52(8):646-651.   Published online July 18, 2014
DOI: https://doi.org/10.1007/s12275-014-4270-2
  • 481 View
  • 0 Download
  • 82 Crossref
AbstractAbstract PDF
This study examined the fecal bacterial diversity of 15-week-old pigs from three purebred lines: Duroc, Landrace, and Yorkshire. Taxon-dependent and -independent analyses were performed to evaluate differences in the fecal bacterial communities and to identify bacterial genera that can be used to discriminate breeds, following high-throughput pyrosequencing of 16S rRNA genes. Among the breeds evaluated, Landrace had the most diverse bacterial community composition. Prevotella, Blautia, Oscillibacter, and Clostridium were detected in all samples regardless of breed. On the other hand, Catenibacterium, Blautia, Dialister, and Sphaerochaeta were differentially detected among breeds, as demonstrated by the canonical loading plot. The discriminant analysis of principal components plot also showed clear separation of the three purebred pig lines, with a certain degree of similarity between Landrace and Yorkshire pigs and a distinct separation between Duroc pigs and the other two breeds. Other factors not related to breed, such as season or time of sampling and pen effects, may contribute to shaping the gut microbiota of pigs.

Citations

Citations to this article as recorded by  
  • Microbial signatures and enterotype clusters in fattening pigs: implications for nitrogen utilization efficiency
    Naomi Sarpong, Jana Seifert, Jörn Bennewitz, Markus Rodehutscord, Amélia Camarinha-Silva
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • Characteristics of gut microbiota and metabolomic of Hainan Tunchang pigs at various growth stages
    Zhen Tan, Jie Li, Yingzhi He, Feifan Wang, Qian Xiao
    Gene.2024; 900: 148161.     CrossRef
  • Effects of dietary xylanase supplementation on growth performance, intestinal health, and immune response of nursery pigs fed diets with reduced metabolizable energy
    Jonathan T Baker, Marcos Elias Duarte, Sung Woo Kim
    Journal of Animal Science.2024;[Epub]     CrossRef
  • Dietary supplementation with Lactiplantibacillus plantarum P-8 improves the growth performance and gut microbiota of weaned piglets
    Jie Yu, Bin Zuo, Qi Li, Feiyan Zhao, Junjun Wang, Weiqiang Huang, Zhihong Sun, Yongfu Chen, Stephan Schmitz-Esser
    Microbiology Spectrum.2024;[Epub]     CrossRef
  • A Comparative Study on the Growth Performance and Gut Microbial Composition of Duroc and Yorkshire Boars
    Junhua Du, Mailin Gan, Zhongwei Xie, Gao Du, Yi Luo, Bin Liu, Kangping Zhu, Lei Chen, Ye Zhao, Lili Niu, Yan Wang, Jingyong Wang, Li Zhu, Linyuan Shen
    Genes.2023; 14(9): 1726.     CrossRef
  • The difference of intestinal microbiota composition between Lantang and Landrace newborn piglets
    Ling Li, Shuai Li, Junyi Luo, Ting Chen, Qianyun Xi, Yongliang Zhang, Jiajie Sun
    BMC Veterinary Research.2023;[Epub]     CrossRef
  • Intestinal microbiota disturbance affects the occurrence of African swine fever
    Cheng-Xing Long, Jie-Qi Wu, Zhou-Jin Tan
    Animal Biotechnology.2023; 34(4): 1040.     CrossRef
  • Role of genetic factors in different swine breeds exhibiting varying levels of resistance/susceptibility to PRRSV
    Xiangbin You, Gan Li, Ying Lei, Zhiqian Xu, Ping Zhang, Youbing Yang
    Virus Research.2023; 326: 199057.     CrossRef
  • Effect of providing citrus pulp-integrated diet on fecal microbiota and serum and fecal metabolome shifts in crossbred pigs
    Dhekra Belloumi, Salvador Calvet, Marta Isabel Roca, Pablo Ferrer, Ana Jiménez-Belenguer, María Cambra-López, Paloma García-Rebollar, Eric Climent, Juan Martínez-Blanch, Marta Tortajada, Empar Chenoll, Almudena Bermejo, Alba Cerisuelo
    Scientific Reports.2023;[Epub]     CrossRef
  • Impact of Early Weaning on Development of the Swine Gut Microbiome
    Benoit St-Pierre, Jorge Yair Perez Palencia, Ryan S. Samuel
    Microorganisms.2023; 11(7): 1753.     CrossRef
  • Effects of Varying Levels of Wheat Bran Dietary Fiber on Growth Performance, Fiber Digestibility and Gut Microbiota in Erhualian and Large White Pigs
    Taoran Du, Pinghua Li, Qing Niu, Guang Pu, Binbin Wang, Gensheng Liu, Pinghui Li, Peipei Niu, Zongping Zhang, Chengwu Wu, Liming Hou, Mette Skou Hedemann, Qingbo Zhao, Ruihua Huang
    Microorganisms.2023; 11(10): 2474.     CrossRef
  • The Role of Gut Microbiota in the Skeletal Muscle Development and Fat Deposition in Pigs
    Qi Han, Xingguo Huang, Fuyong Yan, Jie Yin, Yingping Xiao
    Antibiotics.2022; 11(6): 793.     CrossRef
  • Intestinal Exposure to Ceftiofur and Cefquinome after Intramuscular Treatment and the Impact of Ceftiofur on the Pig Fecal Microbiome and Resistome
    Sofie Rutjens, Nick Vereecke, Ward De Spiegelaere, Siska Croubels, Mathias Devreese
    Antibiotics.2022; 11(3): 342.     CrossRef
  • Dynamic Distribution of Gut Microbiota in Pigs at Different Growth Stages: Composition and Contribution
    Yuheng Luo, Wen Ren, Hauke Smidt, André-Denis G. Wright, Bing Yu, Ghislain Schyns, Ursula M. McCormack, Aaron J. Cowieson, Jie Yu, Jun He, Hui Yan, Jinlong Wu, Roderick I. Mackie, Daiwen Chen, Cheng-Yuan Kao, Rustem Ilyasov
    Microbiology Spectrum.2022;[Epub]     CrossRef
  • Gut Microbiota Composition and Diversity in Different Commercial Swine Breeds in Early and Finishing Growth Stages
    Jianfeng Ma, Jingyun Chen, Mailin Gan, Lei Chen, Ye Zhao, Yan Zhu, Lili Niu, Shunhua Zhang, Li Zhu, Linyuan Shen
    Animals.2022; 12(13): 1607.     CrossRef
  • Effects of Bacillus amyloliquefaciens TL106 Isolated from Tibetan Pigs on Probiotic Potential and Intestinal Microbes in Weaned Piglets
    Haitao Du, Wangyuan Yao, Muhammad Fakhar-e-Alam Kulyar, Yanmei Ding, Huaisen Zhu, Huachun Pan, Kewei Li, Zeeshan Ahmad Bhutta, Suozhu Liu, Jiakui Li, Hui Wang
    Microbiology Spectrum.2022;[Epub]     CrossRef
  • Effect of sex on the gut microbiota characteristics of passerine migratory birds
    Rongfei Yan, Meixia Lu, Lishi Zhang, Jiyuan Yao, Shi Li, Yunlei Jiang
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Exploring methods to summarize gut microbiota composition for microbiability estimation and phenotypic prediction in swine
    Yuqing He, Francesco Tiezzi, Jicai Jiang, Jeremy Howard, Yijian Huang, Kent Gray, Jung-Woo Choi, Christian Maltecca
    Journal of Animal Science.2022;[Epub]     CrossRef
  • Remodeling of the microbiota improves the environmental adaptability and disease resistance in Tibetan pigs
    Zhenyu Chang, Suxue Bo, Qingqing Xiao, Yu Wang, Xi Wu, Yuxuan He, Mujahid Iqbal, Yourong Ye, Peng Shang
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Batch and sampling time exert a larger influence on the fungal community than gastrointestinal location in model animals: A meaningful case study
    Jiayan Li, Daiwen Chen, Bing Yu, Jun He, Zhiqing Huang, Ping Zheng, Xiangbing Mao, Hua Li, Jie Yu, Junqiu Luo, Hui Yan, Yuheng Luo
    Frontiers in Nutrition.2022;[Epub]     CrossRef
  • Different Intestinal Microbiota with Growth Stages of Three-Breed Hybrid Pig
    Cheng-xing Long, Jie-qi Wu, Zhou-jin Tan, Sheng-ping Wang, Takashi Yazawa
    BioMed Research International.2022; 2022: 1.     CrossRef
  • Alterations in gut microbiota improve SCFA production and fiber utilization in Tibetan pigs fed alfalfa diet
    Qingtao Gao, Guangming Sun, Jiujun Duan, Chengzeng Luo, Cidan Yangji, Ruqing Zhong, Liang Chen, Yanbin Zhu, Basang Wangdui, Hongfu Zhang
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Comparative Study on Jejunal Immunity and Microbial Composition of Growing-Period Tibetan Pigs and Duroc × (Landrace × Yorkshire) Pigs
    Yuting Yang, Yongxiang Li, Yanggang Xie, Shiyan Qiao, Lijie Yang, Hongbin Pan
    Frontiers in Veterinary Science.2022;[Epub]     CrossRef
  • Identification of Gut Microbiota Affecting Fiber Digestibility in Pigs
    Qing Niu, Guang Pu, Lijuan Fan, Chen Gao, Tingxu Lan, Chenxi Liu, Taoran Du, Sung Woo Kim, Peipei Niu, Zongping Zhang, Pinghua Li, Ruihua Huang
    Current Issues in Molecular Biology.2022; 44(10): 4557.     CrossRef
  • The Impact of Genetics on Gut Microbiota of Growing and Fattening Pigs under Moderate N Restriction
    Laura Sarri, Sandra Costa-Roura, Joaquim Balcells, Ahmad Reza Seradj, Gabriel de la Fuente
    Animals.2021; 11(10): 2846.     CrossRef
  • Identification of the gut microbiota biomarkers associated with heat cycle and failure to enter oestrus in gilts
    Zhong Wang, Hao Fu, Yunyan Zhou, Min Yan, Dong Chen, Ming Yang, Shijun Xiao, Congying Chen, Lusheng Huang
    Microbial Biotechnology.2021; 14(4): 1316.     CrossRef
  • Evolution of the Gut Microbiota and Its Fermentation Characteristics of Ningxiang Pigs at the Young Stage
    Hao Li, Longteng Ma, Zhiqing Li, Jie Yin, Bie Tan, Jiashun Chen, Qian Jiang, Xiaokang Ma
    Animals.2021; 11(3): 638.     CrossRef
  • The Nutritional Significance of Intestinal Fungi: Alteration of Dietary Carbohydrate Composition Triggers Colonic Fungal Community Shifts in a Pig Model
    Yuheng Luo, Jiayan Li, Hua Zhou, Bing Yu, Jun He, Aimin Wu, Zhiqing Huang, Ping Zheng, Xiangbing Mao, Jie Yu, Hua Li, Huifen Wang, Quyuan Wang, Hui Yan, Daiwen Chen, Danilo Ercolini
    Applied and Environmental Microbiology.2021;[Epub]     CrossRef
  • Fecal microbial composition and functional diversity of Wuzhishan pigs at different growth stages
    Mingying Shao, Zhixin Wang, Yingzhi He, Zhen Tan, Jibin Zhang
    AMB Express.2021;[Epub]     CrossRef
  • Comparison of cecal microbiota composition in hybrid pigs from two separate three-way crosses
    Yuting Yang, Liyan Shen, Huan Gao, Jinming Ran, Xian Li, Hengxin Jiang, Xueyan Li, Zhenhui Cao, Ying Huang, Sumei Zhao, Chunlian Song, Hongbin Pan
    Animal Bioscience.2021; 34(7): 1202.     CrossRef
  • Effects of the Inclusion of Fermented Mulberry Leaves and Branches in the Gestational Diet on the Performance and Gut Microbiota of Sows and Their Offspring
    Yuping Zhang, Chang Yin, Martine Schroyen, Nadia Everaert, Teng Ma, Hongfu Zhang
    Microorganisms.2021; 9(3): 604.     CrossRef
  • Timely Control of Gastrointestinal Eubiosis: A Strategic Pillar of Pig Health
    Paolo Trevisi, Diana Luise, Federico Correa, Paolo Bosi
    Microorganisms.2021; 9(2): 313.     CrossRef
  • Comparative analysis of the rectal and caecal microbial community composition and function in adult Erhualian and Sushan pigs
    B. Li, S. Ren, W. Zhao, X. Wang, F. Tu
    Journal of Animal and Feed Sciences.2021; 30(3): 248.     CrossRef
  • Whole-metagenome shotgun sequencing of pig faecal microbiome
    Letterio Giuffrè, Domenico Giosa, Grazia Galeano, Riccardo Aiese Cigliano, Andreu Paytuví-Gallart, Anna Maria Sutera, Giuseppe Tardiolo, Alessandro Zumbo, Orazio Romeo, Enrico D’Alessandro
    Italian Journal of Animal Science.2021; 20(1): 1147.     CrossRef
  • Comparison of early-life jejunal microbiota diversity in two pig breeds
    Yuting Yang, Huan Gao, Jinming Ran, Ying Huang, Minghua Yang, Lijie Yang, Sumei Zhao, Shiyan Qiao, Hongbin Pan
    Czech Journal of Animal Science.2021; 66(11): 459.     CrossRef
  • Temporal Dynamics of the Gut Bacteriome and Mycobiome in the Weanling Pig
    Ann M. Arfken, Juli Foster Frey, Katie Lynn Summers
    Microorganisms.2020; 8(6): 868.     CrossRef
  • Screening of Microbes Associated With Swine Growth and Fat Deposition Traits Across the Intestinal Tract
    Shi Tang, Ying Xin, Yunlong Ma, Xuewen Xu, Shuhong Zhao, Jianhua Cao
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Interactions between host and gut microbiota in domestic pigs: a review
    Yadnyavalkya Patil, Ravi Gooneratne, Xiang-Hong Ju
    Gut Microbes.2020; 11(3): 310.     CrossRef
  • Dietary Supplementation with Compound Probiotics and Berberine Alters Piglet Production Performance and Fecal Microbiota
    Xiaoxiang Xu, Canyu Yang, Juan Chang, Ping Wang, Qingqiang Yin, Chaoqi Liu, Tianzeng Gao, Xiaowei Dang, Fushan Lu
    Animals.2020; 10(3): 511.     CrossRef
  • The fungal community and its interaction with the concentration of short‐chain fatty acids in the faeces of Chenghua, Yorkshire and Tibetan pigs
    Jiayan Li, Daiwen Chen, Bing Yu, Jun He, Zhiqing Huang, Xiangbing Mao, Ping Zheng, Jie Yu, Junqiu Luo, Gang Tian, Yuheng Luo
    Microbial Biotechnology.2020; 13(2): 509.     CrossRef
  • Composition and functional diversity of fecal bacterial community of wild boar, commercial pig and domestic native pig as revealed by 16S rRNA gene sequencing
    Jinqing Huang, Wenjuan Zhang, Rong Fan, Zhanggen Liu, Tao Huang, Junyi Li, Tonghao Du, Tao Xiong
    Archives of Microbiology.2020; 202(4): 843.     CrossRef
  • Gut microbiome composition differences among breeds impact feed efficiency in swine
    Matteo Bergamaschi, Francesco Tiezzi, Jeremy Howard, Yi Jian Huang, Kent A. Gray, Constantino Schillebeeckx, Nathan P. McNulty, Christian Maltecca
    Microbiome.2020;[Epub]     CrossRef
  • A glance at the gut microbiota of five experimental animal species through fecal samples
    Zhiguang Xiang, Hua Zhu, Bochao Yang, Hang Fan, Jianguo Guo, Jiangning Liu, Qi Kong, Qingfeng Teng, Haiquan Shang, Lei Su, Chuan Qin
    Scientific Reports.2020;[Epub]     CrossRef
  • Microbial Diversity in Bushmeat Samples Recovered from the Serengeti Ecosystem in Tanzania
    Robab Katani, Megan A. Schilling, Beatus Lyimo, Triza Tonui, Isabella M. Cattadori, Ernest Eblate, Andimile Martin, Anna B. Estes, Teresia Buza, Dennis Rentsch, Karen W. Davenport, Blake T. Hovde, Samson Lyimo, Lydia Munuo, Francesca Stomeo, Christian Tia
    Scientific Reports.2019;[Epub]     CrossRef
  • The effect of fumonisins producing Fusarium verticillioides on the microbiota in pig caecum
    Huu Anh Dang, Attila Zsolnai, Melinda Kovács, Brigitta Bóta, Gábor Mihucz, Roland Pósa, Kinga Marosi, Mariam Kachlek, Judit Szabó-Fodor
    Acta Veterinaria Brno.2019; 88(1): 65.     CrossRef
  • Fecal Microbiota and Its Correlation With Fatty Acids and Free Amino Acids Metabolism in Piglets After a Lactobacillus Strain Oral Administration
    Dongyan Zhang, Hui Liu, Sixin Wang, Wei Zhang, Jing Wang, Hongwu Tian, Yamin Wang, Haifeng Ji
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Comparative metabolomic analysis of caecal digesta between Jinhua pig and Landrace pig
    Yujie Gong, Xiaoting Zou, Wenrui Xia, Xueting Wen, Xiaojun Zhang, Yingping Xiao, Hua Yang
    Czech Journal of Animal Science.2019; 64(8): 332.     CrossRef
  • Piglet gut microbial shifts early in life: causes and effects
    Robin B. Guevarra, Jun Hyung Lee, Sun Hee Lee, Min-Jae Seok, Doo Wan Kim, Bit Na Kang, Timothy J. Johnson, Richard E. Isaacson, Hyeun Bum Kim
    Journal of Animal Science and Biotechnology.2019;[Epub]     CrossRef
  • Longitudinal development of the gut microbiota in healthy and diarrheic piglets induced by age‐related dietary changes
    Qiaoli Yang, Xiaoyu Huang, Pengfei Wang, Zunqiang Yan, Wenyang Sun, Shengguo Zhao, Shuangbao Gun
    MicrobiologyOpen.2019;[Epub]     CrossRef
  • Oral Metallo-Beta-Lactamase Protects the Gut Microbiome From Carbapenem-Mediated Damage and Reduces Propagation of Antibiotic Resistance in Pigs
    Sheila Connelly, Brian Fanelli, Nur A. Hasan, Rita R. Colwell, Michael Kaleko
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Different gut microbiome composition in obese Guizhou minipigs between female and castrated male
    Gang Yao, Shuguang Wu, Xianchun Zeng, Hai Zhao, Guoqi Wang, Mingfei Chen, Ning Qian
    Folia Microbiologica.2019; 64(6): 889.     CrossRef
  • Bacterial community analysis for investigating bacterial transfer from tonsils to the pig carcass
    Anne Mette Jakobsen, Martin Iain Bahl, Tasja Buschhardt, Tina Beck Hansen, Waleed Abu Al-Soud, Asker D. Brejnrod, Søren J. Sørensen, Truls Nesbakken, Søren Aabo
    International Journal of Food Microbiology.2019; 295: 8.     CrossRef
  • Core gut microbiota in Jinhua pigs and its correlation with strain, farm and weaning age
    Hua Yang, Yingping Xiao, Junjun Wang, Yun Xiang, Yujie Gong, Xueting Wen, Defa Li
    Journal of Microbiology.2018; 56(5): 346.     CrossRef
  • A Comparative Review on Microbiota Manipulation: Lessons From Fish, Plants, Livestock, and Human Research
    Sylvia Brugman, Wakako Ikeda-Ohtsubo, Saskia Braber, Gert Folkerts, Corné M. J. Pieterse, Peter A. H. M. Bakker
    Frontiers in Nutrition.2018;[Epub]     CrossRef
  • Gut Microbiota Is a Major Contributor to Adiposity in Pigs
    Hua Yang, Yun Xiang, Kelsy Robinson, Junjun Wang, Guolong Zhang, Jiangchao Zhao, Yingping Xiao
    Frontiers in Microbiology.2018;[Epub]     CrossRef
  • Recycling organic residues in agriculture impacts soil-borne microbial community structure, function and N2O emissions
    Afnan Khalil Ahmad Suleiman, Késia Silva Lourenço, Leonardo Machado Pitombo, Lucas William Mendes, Luiz Fernando Wurdig Roesch, Agata Pijl, Janaína Braga Carmo, Heitor Cantarella, Eiko Eurya Kuramae
    Science of The Total Environment.2018; 631-632: 1089.     CrossRef
  • The Effect of Feeding Cocoa Powder and Lactobacillus rhamnosus on the Composition and Function of Pig Intestinal Microbiome
    Gloria I Solano-Aguilar, Sukla Lakshman, Saebyeol Jang, Ethiopia Beshah, Yue Xie, Masoumeh Sikaroodi, Richi Gupta, Bryan Vinyard, Aleksey Molokin, Joseph F Urban, Patrick Gillevet, Cindy D Davis
    Current Developments in Nutrition.2018; 2(5): nzy011.     CrossRef
  • Exploratory Analysis of the Microbiological Potential for Efficient Utilization of Fiber Between Lantang and Duroc Pigs
    Penghui Cheng, Yan Wang, Juanboo Liang, Yinbao Wu, Andredenis Wright, Xindi Liao
    Frontiers in Microbiology.2018;[Epub]     CrossRef
  • The significance of the diversity and composition of the cecal microbiota of the Tibetan swine
    Weiping Yang, Haiyun Xin, Fangjun Cao, Jinxing Hou, Li Ma, Lijuan Bao, Fangyuan Wang, Zhantao Yu, Binyun Cao
    Annals of Microbiology.2018; 68(4): 185.     CrossRef
  • Host Genome Influence on Gut Microbial Composition and Microbial Prediction of Complex Traits in Pigs
    Amelia Camarinha-Silva, Maria Maushammer, Robin Wellmann, Marius Vital, Siegfried Preuss, Jörn Bennewitz
    Genetics.2017; 206(3): 1637.     CrossRef
  • Probiotic roles ofLactobacillussp. in swine: insights from gut microbiota
    V.D.V. Valeriano, M.P. Balolong, D.-K. Kang
    Journal of Applied Microbiology.2017; 122(3): 554.     CrossRef
  • In vitro Interaction between Fumonisin B1 and the Intestinal Microflora of Pigs
    HUU ANH DANG, ATTILA ZSOLNAI, MELINDA KOVACS, ISTVÁN BORS, ANDRÁS BÓNAI, BRIGITTA BÓTA, JUDIT SZABÓ-FODOR
    Polish Journal of Microbiology.2017; 66(2): 245.     CrossRef
  • Studying the Differences of Bacterial Metabolome and Microbiome in the Colon between Landrace and Meihua Piglets
    Shijuan Yan, Cui Zhu, Ting Yu, Wenjie Huang, Jianfeng Huang, Qian Kong, Jingfang Shi, Zhongjian Chen, Qinjian Liu, Shaolei Wang, Zongyong Jiang, Zhuang Chen
    Frontiers in Microbiology.2017;[Epub]     CrossRef
  • Meta-analysis To Define a Core Microbiota in the Swine Gut
    Devin B. Holman, Brian W. Brunelle, Julian Trachsel, Heather K. Allen, Holly Bik
    mSystems.2017;[Epub]     CrossRef
  • The fecal microbiota composition of boar Duroc, Yorkshire, Landrace and Hampshire pigs
    Yingping Xiao, Kaifeng Li, Yun Xiang, Weidong Zhou, Guohong Gui, Hua Yang
    Asian-Australasian Journal of Animal Sciences.2017; 30(10): 1456.     CrossRef
  • Gut microbiota can transfer fiber characteristics and lipid metabolic profiles of skeletal muscle from pigs to germ-free mice
    Honglin Yan, Hui Diao, Yi Xiao, Wenxia Li, Bing Yu, Jun He, Jie Yu, Ping Zheng, Xiangbing Mao, Yuheng Luo, Benhua Zeng, Hong Wei, Daiwen Chen
    Scientific Reports.2016;[Epub]     CrossRef
  • Intestinal microbiota could transfer host Gut characteristics from pigs to mice
    H. Diao, H. L. Yan, Y. Xiao, B. Yu, J. Yu, J. He, P. Zheng, B.H. Zeng, H. Wei, X.B. Mao, D.W. Chen
    BMC Microbiology.2016;[Epub]     CrossRef
  • The Ecological Dynamics of Fecal Contamination and Salmonella Typhi and Salmonella Paratyphi A in Municipal Kathmandu Drinking Water
    Abhilasha Karkey, Thibaut Jombart, Alan W. Walker, Corinne N. Thompson, Andres Torres, Sabina Dongol, Nga Tran Vu Thieu, Duy Pham Thanh, Dung Tran Thi Ngoc, Phat Voong Vinh, Andrew C. Singer, Julian Parkhill, Guy Thwaites, Buddha Basnyat, Neil Ferguson, S
    PLOS Neglected Tropical Diseases.2016; 10(1): e0004346.     CrossRef
  • Revealing the combined effects of lactulose and probiotic enterococci on the swine faecal microbiota using 454 pyrosequencing
    Jong Pyo Chae, Edward Alain B. Pajarillo, Ju Kyoung Oh, Heebal Kim, Dae‐Kyung Kang
    Microbial Biotechnology.2016; 9(4): 486.     CrossRef
  • Effect of sodium humate and zinc oxide used in prophylaxis of post-weaning diarrhoea on faecal microbiota composition in weaned piglets
    M. Kaevska, A. Lorencova, P. Videnska, K. Sedlar, I. Provaznik, M. Trckova
    Veterinární medicína.2016; 61(6): 328.     CrossRef
  • Changes in the diversity and composition of gut microbiota of weaned piglets after oral administration of Lactobacillus or an antibiotic
    Dongyan Zhang, Haifeng Ji, Hui Liu, Sixin Wang, Jing Wang, Yamin Wang
    Applied Microbiology and Biotechnology.2016; 100(23): 10081.     CrossRef
  • Effect of Antibiotic Treatment on the Gastrointestinal Microbiome of Free-Ranging Western Lowland Gorillas (Gorilla g. gorilla)
    Klára Vlčková, Andres Gomez, Klára J. Petrželková, Christopher A. Whittier, Angelique F. Todd, Carl J. Yeoman, Karen E. Nelson, Brenda A. Wilson, Rebecca M. Stumpf, David Modrý, Bryan A. White, Steven R. Leigh
    Microbial Ecology.2016; 72(4): 943.     CrossRef
  • N2 Gas Flushing Alleviates the Loss of Bacterial Diversity and Inhibits Psychrotrophic Pseudomonas during the Cold Storage of Bovine Raw Milk
    Silvia Gschwendtner, Tapani Alatossava, Susanne Kublik, Mirna Mrkonjić Fuka, Michael Schloter, Patricia Munsch-Alatossava, George-John Nychas
    PLOS ONE.2016; 11(1): e0146015.     CrossRef
  • Effects of dispersal limitation in the face of intense selection via dietary intervention on the faecal microbiota of rats
    Heli J. Barron Pastor, David M. Gordon
    Environmental Microbiology Reports.2016; 8(2): 187.     CrossRef
  • Evaluation of DNA extraction kits and phylogenetic diversity of the porcine gastrointestinal tract based on Illumina sequencing of two hypervariable regions
    Katharina Burbach, Jana Seifert, Dietmar H. Pieper, Amélia Camarinha‐Silva
    MicrobiologyOpen.2016; 5(1): 70.     CrossRef
  • Description of a novel pectin-degrading bacterial species Prevotella pectinovora sp. nov., based on its phenotypic and genomic traits
    Brigita Nograšek, Tomaž Accetto, Lijana Fanedl, Gorazd Avguštin
    Journal of Microbiology.2015; 53(8): 503.     CrossRef
  • A comparison of faecal microbial populations of South African Windsnyer-type indigenous pigs (SAWIPs) and Large White × Landrace (LW × LR) crosses fed diets containing ensiled maize cobs
    Arnold T. Kanengoni, Michael Chimonyo, Taurai Tasara, Paul Cormican, Aspinas Chapwanya, Bongani K. Ndimba, Kennedy Dzama, Abelardo Margolles
    FEMS Microbiology Letters.2015; 362(13): fnv100.     CrossRef
  • Characterization of the Fecal Microbial Communities of Duroc Pigs Using 16S rRNA Gene Pyrosequencing
    Edward Alain B. Pajarillo, Jong Pyo Chae, Marilen P. Balolong, Hyeun Bum Kim, Kang-Seok Seo, Dae-Kyung Kang
    Asian-Australasian Journal of Animal Sciences.2015; 28(4): 584.     CrossRef
  • Barcoded pyrosequencing-based metagenomic analysis of the faecal microbiome of three purebred pig lines after cohabitation
    Edward Alain B. Pajarillo, Jong Pyo Chae, Hyeun Bum Kim, In Ho Kim, Dae-Kyung Kang
    Applied Microbiology and Biotechnology.2015; 99(13): 5647.     CrossRef
  • The pig gut microbial diversity: Understanding the pig gut microbial ecology through the next generation high throughput sequencing
    Hyeun Bum Kim, Richard E. Isaacson
    Veterinary Microbiology.2015; 177(3-4): 242.     CrossRef
  • Effects of probiotic Enterococcus faecium NCIMB 11181 administration on swine fecal microbiota diversity and composition using barcoded pyrosequencing
    Edward Alain B. Pajarillo, Jong Pyo Chae, Marilen P. Balolong, Hyeun Bum Kim, Chan-Soo Park, Dae-Kyung Kang
    Animal Feed Science and Technology.2015; 201: 80.     CrossRef
  • Lactulose increases bacterial diversity and modulates the swine faecal microbiome as revealed by 454-pyrosequencing
    Jong Pyo Chae, Edward Alain B. Pajarillo, Chan-Soo Park, Dae-Kyung Kang
    Animal Feed Science and Technology.2015; 209: 157.     CrossRef
Review
REVIEW] The development of fluconazole resistance in Candida albicans – an example of microevolution of a fungal pathogen
Joachim Morschhäuser
J. Microbiol. 2016;54(3):192-201.   Published online February 27, 2016
DOI: https://doi.org/10.1007/s12275-016-5628-4
  • 498 View
  • 1 Download
  • 81 Crossref
AbstractAbstract PDF
The yeast Candida albicans is a member of the microbiota in the gastrointestinal and urogenital tracts of most healthy persons, but it can also cause symptomatic infections, especially in immunocompromised patients. During the life-long association with its human host, C. albicans generates genetically altered variants that are better adapted to changes in their environment. A prime example of this microevolution is the development of resistance to the commonly used drug fluconazole, which inhibits ergosterol biosynthesis, during antimycotic therapy. Fluconazole resistance can be caused by mutations in the drug target, by changes in the sterol biosynthesis pathway, and by gain-of-function mutations in transcription factors that result in the constitutive upregulation of ergosterol biosynthesis genes and multidrug efflux pumps. Fluconazole also induces genomic rearrangements that result in gene amplification and loss of heterozygosity for resistance mutations, which further increases drug resistance. These genome alterations may affect extended chromosomal regions and have additional phenotypic consequences. A striking case is the loss of heterozygosity for the mating type locus MTL in many fluconazole-resistant clinical isolates, which allows the cells to switch to the mating-competent opaque phenotype. This, in turn, raises the possibility that sexual recombination between different variants of an originally clonal, drug-susceptible population may contribute to the generation of highly fluconazole-resistant strains with multiple resistance mechanisms. The gain-of-function mutations in transcription factors, which result in deregulated gene expression, also cause reduced fitness. In spite of this, many clinical isolates that contain such mutations do not exhibit fitness defects, indicating that they have overcome the costs of drug resistance with further evolution by still unknown mechanisms.

Citations

Citations to this article as recorded by  
  • The Neosartorya (Aspergillus) fischeri antifungal protein NFAP2 has low potential to trigger resistance development in Candida albicans in vitro
    Gábor Bende, Nóra Zsindely, Krisztián Laczi, Zsolt Kristóffy, Csaba Papp, Attila Farkas, Liliána Tóth, Szabolcs Sáringer, László Bodai, Gábor Rákhely, Florentine Marx, László Galgóczy, Gustavo H. Goldman, Norman van Rhijn
    Microbiology Spectrum.2025;[Epub]     CrossRef
  • Anti-fungal peptides: an emerging category with enthralling therapeutic prospects in the treatment of candidiasis
    Jyoti Sankar Prusty, Ashwini Kumar, Awanish Kumar
    Critical Reviews in Microbiology.2025; 51(5): 755.     CrossRef
  • Structural, physicochemical characterization and antimicrobial activities of a new tris(8-quinolinolato-κ2N,O)cobalt(III) ethanol solvate [Co(C9H6NO)3].(C2H6O)
    Salsabil Idoudi, Badiaa Essghaier, Mohamed Faouzi Zid, Saoussen Namouchi Cherni
    Journal of Molecular Structure.2024; 1296: 136848.     CrossRef
  • Adaptation of Candida albicans to specific host environments by gain-of-function mutations in transcription factors
    Joachim Morschhäuser, Aaron P. Mitchell
    PLOS Pathogens.2024; 20(11): e1012643.     CrossRef
  • Tackling multi-drug resistant fungi by efflux pump inhibitors
    Kritika Engle, Gautam Kumar
    Biochemical Pharmacology.2024; 226: 116400.     CrossRef
  • The TAC1 Gene in Candida albicans: Structure, Function, and Role in Azole Resistance: A Mini-Review
    Amir Hossein Mahdizade, Akbar Hoseinnejad, Mona Ghazanfari, Mohammad Javad Boozhmehrani, Seyed Sobhan Bahreiny, Mahdi Abastabar, Roberta Galbo, Letterio Giuffrè, Iman Haghani, Orazio Romeo
    Microbial Drug Resistance.2024; 30(7): 288.     CrossRef
  • Boric Acid for the Treatment of Vaginitis: New Possibilities Using an Old Anti‐Infective Agent: A Systematic Review
    Matilde Lærkeholm Müller, Christina Damsted Petersen, Ditte Marie L. Saunte, Althea East-Innis
    Dermatologic Therapy.2024;[Epub]     CrossRef
  • Microevolution during Chronic Infection May Lead T. asahii to Coexist with the Host
    Gen Ba, Xuelian Lv, Xin Yang, Wenling Wang, Junhong Ao, Rongya Yang, Ioannis D. Bassukas
    Dermatology Research and Practice.2024;[Epub]     CrossRef
  • Cluster analysis allowed to identify antifungal drugs that retain efficacy against Candida albicans isolated from patients with inflammatory diseases of the soft tissues of the maxillofacial area
    Mariia Faustova, Volodymyr Dobrovolskyi, Galina Loban’, Yevhenii Bereza, Aleksandra Kotelnikova, Oleksandr Dobrovolskyi
    Frontiers in Oral Health.2024;[Epub]     CrossRef
  • Two different types of tandem sequences mediate the overexpression of TinCYP51B in azole-resistant Trichophyton indotineae
    Tsuyoshi Yamada, Mari Maeda, Hiroaki Nagai, Karine Salamin, Yun-Tsan Chang, Emmanuella Guenova, Marc Feuermann, Michel Monod, Andreas H. Groll
    Antimicrobial Agents and Chemotherapy.2023;[Epub]     CrossRef
  • Anticandidal activity of nanocomposite based on nanochitosan, nanostarch and mycosynthesized copper oxide nanoparticles against multidrug-resistant Candida
    Mohamed Saied, Mohamed Hasanin, Tarek M. Abdelghany, Basma H. Amin, Amr H. Hashem
    International Journal of Biological Macromolecules.2023; 242: 124709.     CrossRef
  • Assessing the In Vitro Potential of Glatiramer Acetate (Copaxone®) as a Chemotherapeutic Candidate for the Treatment of Cryptococcus neoformans Infection
    Vinicius Alves, Pedro Henrique Martins, Bruna Miranda, Iara Bastos de Andrade, Luiza Pereira, Christina Takiya Maeda, Glauber Ribeiro de Sousa Araújo, Susana Frases
    Journal of Fungi.2023; 9(8): 783.     CrossRef
  • Detrimental consequences of tebuconazole on redox homeostasis and fatty acid profile of honeybee brain
    Máté Mackei, Csilla Sebők, Júlia Vöröházi, Patrik Tráj, Fruzsina Mackei, Barnabás Oláh, Hedvig Fébel, Zsuzsanna Neogrády, Gábor Mátis
    Insect Biochemistry and Molecular Biology.2023; 159: 103990.     CrossRef
  • Benzamidine Conjugation Converts Expelled Potential Active Agents into Antifungals against Drug-Resistant Fungi
    Xue Wang, Xueyang Jin, Zhiyu Xie, Hongyang Zhang, Tiantian Liu, Hongbo Zheng, Xiaoyi Luan, Yan Sun, Wenjie Fang, Wenqiang Chang, Hongxiang Lou
    Journal of Medicinal Chemistry.2023; 66(19): 13684.     CrossRef
  • Advances in efficacy enhancement of photosensitizer-mediated photodynamic antimicrobial chemotherapy
    Benard M. Isaiah, Edith K. Amuhaya, Clare I. Muhanji
    Journal of Porphyrins and Phthalocyanines.2023; 27(06): 819.     CrossRef
  • Azobenzene derivatives with activity against drug‐resistant Candida albicans and Candida auris
    Martina Raschig, Bernardo Ramírez‐Zavala, Johannes Wiest, Marco Saedtler, Marcus Gutmann, Ulrike Holzgrabe, Joachim Morschhäuser, Lorenz Meinel
    Archiv der Pharmazie.2023;[Epub]     CrossRef
  • A New Variant of Mutational and Polymorphic Signatures in the ERG11 Gene of Fluconazole-Resistant Candida albicans
    Arome Solomon Odiba, Olanrewaju Ayodeji Durojaye, Ifeoma Maureen Ezeonu, Anthony Christian Mgbeahuruike, Bennett Chima Nwanguma
    Infection and Drug Resistance.2022; Volume 15: 3111.     CrossRef
  • Metabolite profiling, antifungal, biofilm formation prevention and disruption of mature biofilm activities of Erythrina senegalensis stem bark extract against Candida albicans and Candida glabrata
    Benjamin Kingsley Harley, Anthony Martin Quagraine, David Neglo, Mike Okweesi Aggrey, Emmanuel Orman, Nana Ama Mireku-Gyimah, Cedric Dzidzor Amengor, Jonathan Jato, Yussif Saaka, Theophilus Christian Fleischer, Umakanta Sarker
    PLOS ONE.2022; 17(11): e0278096.     CrossRef
  • Antifungal Exposure and Resistance Development: Defining Minimal Selective Antifungal Concentrations and Testing Methodologies
    Emily M. Stevenson, William H. Gaze, Neil A. R. Gow, Alwyn Hart, Wiebke Schmidt, Jane Usher, Adilia Warris, Helen Wilkinson, Aimee K. Murray
    Frontiers in Fungal Biology.2022;[Epub]     CrossRef
  • The Risk Factors and Mechanisms of Azole Resistance of Candida tropicalis Blood Isolates in Thailand: A Retrospective Cohort Study
    Teera Leepattarakit, Orawan Tulyaprawat, Popchai Ngamskulrungroj
    Journal of Fungi.2022; 8(10): 983.     CrossRef
  • Genomic Variation-Mediating Fluconazole Resistance in Yeast
    Wen-Yao Wang, Hong-Qing Cai, Si-Yuan Qu, Wei-Hao Lin, Cheng-Cheng Liang, Hao Liu, Ze-Xiong Xie, Ying-Jin Yuan
    Biomolecules.2022; 12(6): 845.     CrossRef
  • Antifungals and Drug Resistance
    Chowdhury Mobaswar Hossain, Lisa Kathleen Ryan, Meeta Gera, Sabyasachi Choudhuri, Nazmun Lyle, Kazi Asraf Ali, Gill Diamond
    Encyclopedia.2022; 2(4): 1722.     CrossRef
  • Synergistic Effect of the Combination of Deferoxamine and Fluconazole In Vitro and In Vivo against Fluconazole-Resistant Candida Spp.
    Lulu An, Jingwen Tan, Yuanyuan Wang, Siyu Liu, Yongyong Li, Lianjuan Yang
    Antimicrobial Agents and Chemotherapy.2022;[Epub]     CrossRef
  • Structure-Guided Discovery of the Novel Covalent Allosteric Site and Covalent Inhibitors of Fructose-1,6-Bisphosphate Aldolase to Overcome the Azole Resistance of Candidiasis
    Wuqiang Wen, Hongxuan Cao, Yunyuan Huang, Jie Tu, Chen Wan, Jian Wan, Xinya Han, Han Chen, Jiaqi Liu, Li Rao, Chen Su, Chao Peng, Chunquan Sheng, Yanliang Ren
    Journal of Medicinal Chemistry.2022; 65(3): 2656.     CrossRef
  • Genome plasticity in Candida albicans: A cutting-edge strategy for evolution, adaptation, and survival
    Ifeanyi Elibe Mba, Emeka Innocent Nweze, Emmanuel Aniebonam Eze, Zikora Kizito Glory Anyaegbunam
    Infection, Genetics and Evolution.2022; 99: 105256.     CrossRef
  • Activity of poly(methacrylic acid)-silver nanoparticles on fluconazole-resistant Candida albicans strains: Synergistic and cytotoxic effects
    Cecília Maria Cruz Falcão, Audrey Andrade, Vanderlan Nogueira Holanda, Regina Celia Bressan Queiroz de Figueiredo, Eulália Azevedo Ximenes, Anderson Stevens Leonidas Gomes
    Journal of Applied Microbiology.2022; 132(6): 4300.     CrossRef
  • Antimicrobial Photodynamic Therapy: Latest Developments with a Focus on Combinatory Strategies
    Raphaëlle Youf, Max Müller, Ali Balasini, Franck Thétiot, Mareike Müller, Alizé Hascoët, Ulrich Jonas, Holger Schönherr, Gilles Lemercier, Tristan Montier, Tony Le Gall
    Pharmaceutics.2021; 13(12): 1995.     CrossRef
  • Etoposide and Camptothecin Reduce Growth, Viability, the Generation of Petite Mutants, and Recognize the Active Site of DNA Topoisomerase I and II Enzymes in Candida glabrata
    Dulce Andrade-Pavón, Omar Gómez-García
    Indian Journal of Microbiology.2021; 61(3): 306.     CrossRef
  • 8-hydroxyquinoline-5-(N-4-chlorophenyl) sulfonamide and fluconazole combination as a preventive strategy for Candida biofilm in haemodialysis devices
    Letícia Fernandes da Rocha, Bruna Pippi, Angélica Rocha Joaquim, Saulo Fernandes de Andrade, Alexandre Meneghello Fuentefria
    Journal of Medical Microbiology .2021;[Epub]     CrossRef
  • Genetic diversity and molecular epidemiology of Candida albicans from vulvovaginal candidiasis patients
    Ji-yun Tian, Yong-gang Yang, Shi Chen, Yong Teng, Xin-zheng Li
    Infection, Genetics and Evolution.2021; 92: 104893.     CrossRef
  • Chronic recurrent vulvovaginitis is not only due to Candida
    Alicia Arechavala, Ricardo Negroni, Gabriela Santiso, Roxana Depardo, Pablo Bonvehí
    Revista Iberoamericana de Micología.2021; 38(3): 132.     CrossRef
  • Systematic truncations of chromosome 4 and their responses to antifungals in Candida albicans
    Wasim Uddin, Darshan Dhabalia, S.M. Udaya Prakash, M. Anaul Kabir
    Journal of Genetic Engineering and Biotechnology.2021; 19(1): 92.     CrossRef
  • Hinokitiol chelates intracellular iron to retard fungal growth by disturbing mitochondrial respiration
    Xueyang Jin, Ming Zhang, Jinghui Lu, Ximeng Duan, Jinyao Chen, Yue Liu, Wenqiang Chang, Hongxiang Lou
    Journal of Advanced Research.2021; 34: 65.     CrossRef
  • Lysinibacillus Isolate MK212927: A Natural Producer of Allylamine Antifungal ‘Terbinafine’
    Sayed E. El-Sayed, Neveen A. Abdelaziz, Hosam-Eldin Hussein Osman, Ghadir S. El-Housseiny, Ahmed E. Aleissawy, Khaled M. Aboshanab
    Molecules.2021; 27(1): 201.     CrossRef
  • New Approach to Antifungal Activity of Fluconazole Incorporated into the Porous 6-Anhydro-α-l-Galacto-β-d-Galactan Structures Modified with Nanohydroxyapatite for Chronic-Wound Treatments—In Vitro Evaluation
    Justyna Rewak-Soroczynska, Paulina Sobierajska, Sara Targonska, Agata Piecuch, Lukasz Grosman, Jaroslaw Rachuna, Slawomir Wasik, Michal Arabski, Rafal Ogorek, Rafal J. Wiglusz
    International Journal of Molecular Sciences.2021; 22(6): 3112.     CrossRef
  • The phosphatome of opportunistic pathogen Candida species
    Krisztina Szabó, Márton Miskei, Ilona Farkas, Viktor Dombrádi
    Fungal Biology Reviews.2021; 35: 40.     CrossRef
  • Azole-triphenylphosphonium conjugates combat antifungal resistance and alleviate the development of drug-resistance
    Xin Wang, Jun Liu, Jinyao Chen, Ming Zhang, Chuan Tian, Xiaoping Peng, Gang Li, Wenqiang Chang, Hongxiang Lou
    Bioorganic Chemistry.2021; 110: 104771.     CrossRef
  • Activity of Compound Agrimony Enteritis Capsules against invasive candidiasis: Exploring the differences between traditional Chinese medicine prescriptions and its main components in the treatment of diseases
    Jun Li, Ze-Hua Jin, Jia-Sheng Li, Liu-Yan Su, Ying-Xian Wang, Yi Zhang, Ding-Mei Qin, Gao-Xiong Rao, Rui-Rui Wang
    Journal of Ethnopharmacology.2021; 277: 114201.     CrossRef
  • Identification and Characterization of Mediators of Fluconazole Tolerance in Candida albicans
    Eric Delarze, Ludivine Brandt, Emilie Trachsel, Marion Patxot, Claire Pralong, Fabio Maranzano, Murielle Chauvel, Mélanie Legrand, Sadri Znaidi, Marie-Elisabeth Bougnoux, Christophe d’Enfert, Dominique Sanglard
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • A Zinc Cluster Transcription Factor Contributes to the Intrinsic Fluconazole Resistance of Candida auris
    Eva-Maria Mayr, Bernardo Ramírez-Zavala, Ines Krüger, Joachim Morschhäuser, Aaron P. Mitchell
    mSphere.2020;[Epub]     CrossRef
  • Fungal Lanosterol 14α-demethylase: A target for next-generation antifungal design
    Brian C. Monk, Alia A. Sagatova, Parham Hosseini, Yasmeen N. Ruma, Rajni K. Wilson, Mikhail V. Keniya
    Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics.2020; 1868(3): 140206.     CrossRef
  • Dispiropyrrolidine tethered piperidone heterocyclic hybrids with broad-spectrum antifungal activity against Candida albicans and Cryptococcus neoformans
    Sarah Lawson, Natarajan Arumugam, Abdulrahman I. Almansour, Raju Suresh Kumar, Shankar Thangamani
    Bioorganic Chemistry.2020; 100: 103865.     CrossRef
  • Lipid composition and cell surface hydrophobicity of Candida albicans influence the efficacy of fluconazole–gentamicin treatment
    Jakub Suchodolski, Jakub Muraszko, Aleksandra Korba, Przemysław Bernat, Anna Krasowska
    Yeast.2020; 37(1): 117.     CrossRef
  • Adaptive Laboratory Evolution of Native Torulaspora delbrueckii YCPUC10 With Enhanced Ethanol Resistance and Evaluation in Co-inoculated Fermentation
    Daniela Catrileo, Andrea Acuña-Fontecilla, Liliana Godoy
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Genotype, biofilm formation ability and specific gene transcripts characteristics of endodontic Enterococcus faecalis under glucose deprivation condition
    Yawen Liu, Yifan Ping, Yuhua Xiong, Ruyu Zhou, Fulu Xu, Juan Wang, Jin Li
    Archives of Oral Biology.2020; 118: 104877.     CrossRef
  • Improved Methods of Extraction and In Vitro Evaluation of Antimicrobial Potential of Stem Bark of Terminalia arjuna
    Sarita Khatkar, Arun Nanda, Shahid Husain Ansari
    Current Biochemical Engineering.2019; 5(1): 50.     CrossRef
  • The small GTPase Rhb1 is involved in the cell response to fluconazole inCandida albicans
    Yu-Wen Chen, Ying-Chieh Yeh, Hsueh-Fen Chen, Ruei-Ching Chen, Guan-Yu Lin, Yu-Ting Chen, Chung-Yu Lan
    FEMS Yeast Research.2019;[Epub]     CrossRef
  • The Magnitude ofCandida albicansStress-Induced Genome Instability Results from an Interaction Between Ploidy and Antifungal Drugs
    Ognenka Avramovska, Meleah A Hickman
    G3 Genes|Genomes|Genetics.2019; 9(12): 4019.     CrossRef
  • Cytochalasans from the Endophytic Fungus Xylaria cf. curta with Resistance Reversal Activity against Fluconazole-Resistant Candida albicans
    Wen-Xuan Wang, Xinxiang Lei, Hong-Lian Ai, Xue Bai, Jing Li, Juan He, Zheng-Hui Li, Yong-Sheng Zheng, Tao Feng, Ji-Kai Liu
    Organic Letters.2019; 21(4): 1108.     CrossRef
  • Antifungal Activity of a Hydroethanolic Extract From Astronium urundeuva Leaves Against Candida albicans and Candida glabrata
    Bruna Vidal Bonifácio, Taissa Vieira Machado Vila, Isadora Fantacini Masiero, Patrícia Bento da Silva, Isabel Cristiane da Silva, Érica de Oliveira Lopes, Matheus Aparecido dos Santos Ramos, Leonardo Perez de Souza, Wagner Vilegas, Fernando Rogério Pavan,
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Dissection of the regulatory role for the N-terminal domain in Candida albicans protein phosphatase Z1
    Krisztina Szabó, Zoltán Kónya, Ferenc Erdődi, Ilona Farkas, Viktor Dombrádi, Joy Sturtevant
    PLOS ONE.2019; 14(2): e0211426.     CrossRef
  • The Impact of Gene Dosage and Heterozygosity on the Diploid Pathobiont Candida albicans
    Shen-Huan Liang, Richard J. Bennett
    Journal of Fungi.2019; 6(1): 10.     CrossRef
  • Evolution of Fluconazole-Resistant Candida albicans Strains by Drug-Induced Mating Competence and Parasexual Recombination
    Christina Popp, Bernardo Ramírez-Zavala, Sonja Schwanfelder, Ines Krüger, Joachim Morschhäuser, Judith Berman
    mBio.2019;[Epub]     CrossRef
  • Accelerated evolution at chaperone promoters among Antarctic notothenioid fishes
    Samuel N. Bogan, Sean P. Place
    BMC Evolutionary Biology.2019;[Epub]     CrossRef
  • Elevation of cell wall chitin via Ca2+–calcineurin‐mediated PKC signaling pathway maintains the viability of Candida albicans in the absence of β‐1,6‐glucan synthesis
    Qi Han, Na Wang, Chaoying Pan, Yue Wang, Jianli Sang
    Molecular Microbiology.2019; 112(3): 960.     CrossRef
  • Azole Resistance Reduces Susceptibility to the Tetrazole Antifungal VT-1161
    Brian C. Monk, Mikhail V. Keniya, Manya Sabherwal, Rajni K. Wilson, Danyon O. Graham, Harith F. Hassan, Danni Chen, Joel D. A. Tyndall
    Antimicrobial Agents and Chemotherapy.2019;[Epub]     CrossRef
  • The Fungal CYP51s: Their Functions, Structures, Related Drug Resistance, and Inhibitors
    Jingxiang Zhang, Liping Li, Quanzhen Lv, Lan Yan, Yan Wang, Yuanying Jiang
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Two New 1,3,4-Oxadiazoles With Effective Antifungal Activity Against Candida albicans
    Isis Regina Grenier Capoci, Karina Mayumi Sakita, Daniella Renata Faria, Franciele Abigail Vilugron Rodrigues-Vendramini, Glaucia Sayuri Arita, Admilton Gonçalves de Oliveira, Maria Sueli Felipe, Bernard Maigret, Patricia de Souza Bonfim-Mendonça, Erika S
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Anti-candidal activity of selected analgesic drugs used alone and in combination with fluconazole, itraconazole, voriconazole, posaconazole and isavuconazole
    J. Król, U. Nawrot, M. Bartoszewicz
    Journal de Mycologie Médicale.2018; 28(2): 327.     CrossRef
  • Blad-containing oligomer: a novel fungicide used in crop protection as an alternative treatment for tinea pedis and tinea versicolor
    Alexandra Carreira, João Boavida Ferreira, Iliana Pereira, João Ferreira, Paulo Filipe, Ricardo Boavida Ferreira, Sara Monteiro
    Journal of Medical Microbiology.2018; 67(2): 198.     CrossRef
  • Varying susceptibility of clinical and environmental Scedosporium isolates to chemical oxidative stress in conidial germination
    Cindy Staerck, Charlotte Godon, Jean-Philippe Bouchara, Maxime J. J. Fleury
    Archives of Microbiology.2018; 200(3): 517.     CrossRef
  • Rice Defensin OsAFP1 is a New Drug Candidate against Human Pathogenic Fungi
    Akihito Ochiai, Kodai Ogawa, Minami Fukuda, Masahiro Ohori, Takumi Kanaoka, Takaaki Tanaka, Masayuki Taniguchi, Yoshiyuki Sagehashi
    Scientific Reports.2018;[Epub]     CrossRef
  • Thiobarbiturates as potential antifungal agents to control human infections caused by Candida and Cryptococcus species
    Muhammad Shabeer, Luiz C. A. Barbosa, Milandip Karak, Amanda C. S. Coelho, Jacqueline A. Takahashi
    Medicinal Chemistry Research.2018; 27(4): 1043.     CrossRef
  • A Case for Antifungal Stewardship
    Rachel A. Miller
    Current Fungal Infection Reports.2018; 12(1): 33.     CrossRef
  • A Hyperactive Form of the Zinc Cluster Transcription Factor Stb5 Causes YOR1 Overexpression and Beauvericin Resistance in Candida albicans
    Bernardo Ramírez-Zavala, Hannah Manz, Frank Englert, P. David Rogers, Joachim Morschhäuser
    Antimicrobial Agents and Chemotherapy.2018;[Epub]     CrossRef
  • Current treatment options for vulvovaginal candidiasis caused by azole-resistant Candida species
    J. D. Sobel, R. Sobel
    Expert Opinion on Pharmacotherapy.2018; 19(9): 971.     CrossRef
  • CYP51 as drug targets for fungi and protozoan parasites: past, present and future
    Galina I. Lepesheva, Laura Friggeri, Michael R. Waterman
    Parasitology.2018; 145(14): 1820.     CrossRef
  • TLS dependent and independent functions of DNA polymerase eta (Polη/Rad30) from Pathogenic Yeast Candida albicans
    Kodavati Manohar, Doureradjou Peroumal, Narottam Acharya
    Molecular Microbiology.2018; 110(5): 707.     CrossRef
  • Potential effect of 2-isopropyl-5-methylphenol (thymol) alone and in combination with fluconazole against clinical isolates of Candida albicans, C. glabrata and C. krusei
    A. Sharifzadeh, A.R. Khosravi, H. Shokri, H. Shirzadi
    Journal de Mycologie Médicale.2018; 28(2): 294.     CrossRef
  • Fluconazole-Pyridoxine Bis-Triazolium Compounds with Potent Activity against Pathogenic Bacteria and Fungi Including Their Biofilm-Embedded Forms
    Marsel R. Garipov, Roman S. Pavelyev, Svetlana A. Lisovskaya, Elena V. Nikitina, Airat R. Kayumov, Alina E. Sabirova, Oksana V. Bondar, Albina G. Malanyeva, Alexander M. Aimaletdinov, Alfia G. Iksanova, Konstantin V. Balakin, Yurii G. Shtyrlin
    Journal of Chemistry.2017; 2017: 1.     CrossRef
  • Bridging the Gap to Non-toxic Fungal Control: Lupinus-Derived Blad-Containing Oligomer as a Novel Candidate to Combat Human Pathogenic Fungi
    Ana M. Pinheiro, Alexandra Carreira, Thomas A. K. Prescott, Ricardo B. Ferreira, Sara A. Monteiro
    Frontiers in Microbiology.2017;[Epub]     CrossRef
  • An acquired mechanism of antifungal drug resistance simultaneously enables Candida albicans to escape from intrinsic host defenses
    Irene A. I. Hampe, Justin Friedman, Mira Edgerton, Joachim Morschhäuser, Julia Ruth Koehler
    PLOS Pathogens.2017; 13(9): e1006655.     CrossRef
  • Antimicrobial activity of Buchenavia tetraphylla against Candida albicans strains isolated from vaginal secretions
    José Robson Neves Cavalcanti Filho, Tiago Fonseca Silva, Woah Queiroz Nobre, Larissa Isabela Oliveira de Souza, Cristiane Santos Silva e Silva Figueiredo, Regina Celia Bressan Queiroz de Figueiredo, Norma Buarque de Gusmão, Márcia Vanusa Silva, Luís Cláud
    Pharmaceutical Biology.2017; 55(1): 1521.     CrossRef
  • Antifungal Resistance: An Emerging Reality and A Global Challenge
    Dimitrios P Kontoyiannis
    The Journal of Infectious Diseases.2017; 216(suppl_3): S431.     CrossRef
  • Candida albicans Swi/Snf and Mediator Complexes Differentially Regulate Mrr1-Induced MDR1 Expression and Fluconazole Resistance
    Zhongle Liu, Lawrence C. Myers
    Antimicrobial Agents and Chemotherapy.2017;[Epub]     CrossRef
  • Structural analyses of Candida albicans sterol 14α-demethylase complexed with azole drugs address the molecular basis of azole-mediated inhibition of fungal sterol biosynthesis
    Tatiana Y. Hargrove, Laura Friggeri, Zdzislaw Wawrzak, Aidong Qi, William J. Hoekstra, Robert J. Schotzinger, John D. York, F. Peter Guengerich, Galina I. Lepesheva
    Journal of Biological Chemistry.2017; 292(16): 6728.     CrossRef
  • The natural compound magnolol affects growth, biofilm formation, and ultrastructure of oral Candida isolates
    Jawad Behbehani, Sheikh Shreaz, Mohammad Irshad, Maribassapa Karched
    Microbial Pathogenesis.2017; 113: 209.     CrossRef
  • The Structure of Thymidylate Kinase from Candida albicans Reveals a Unique Structural Element
    Kaustubh Sinha, Gordon S. Rule
    Biochemistry.2017; 56(33): 4360.     CrossRef
  • Histone Acetyltransferase Encoded by NGG1 is Required for Morphological Conversion and Virulence of Candida Albicans
    De-Dong Li, Beth Burgwyn Fuchs, Yan Wang, Xiao-Wen Huang, Dan-Dan Hu, Yan Sun, Dong Chai, Yuan-Ying Jiang, Eleftherios Mylonakis
    Future Microbiology.2017; 12(16): 1497.     CrossRef
  • Human fungal pathogens: Why should we learn?
    Jeong-Yoon Kim
    Journal of Microbiology.2016; 54(3): 145.     CrossRef
  • Candidaspecies isolated from different body sites and their antifungal susceptibility pattern: Cross-analysis ofCandida albicansandCandida glabratabiofilms
    Valentina Cataldi, Emanuela Di Campli, Paolo Fazii, Tonino Traini, Luigina Cellini, Mara Di Giulio
    Medical Mycology.2016; : myw126.     CrossRef
Research Support, Non-U.S. Gov't
Antiviral Activities of Flavonoids Isolated from the Bark of Rhus verniciflua Stokes against Fish Pathogenic Viruses In Vitro
So Young Kang , Ji-Young Kang , Myung-Joo Oh
J. Microbiol. 2012;50(2):293-300.   Published online April 27, 2012
DOI: https://doi.org/10.1007/s12275-012-2068-7
  • 248 View
  • 0 Download
  • 80 Crossref
AbstractAbstract PDF
An 80% methanolic extract of Rhus verniciflua Stokes bark showed significant anti-viral activity against fish pathogenic infectious hematopoietic necrosis virus (IHNV) and viral hemorrhagic septicemia virus (VHSV) in a cell-based assay measuring virus-induced cytopathic effect (CPE). Activity-guided fractionation and isolation for the 80% methanolic extract of R. verniciflua yielded the most active ethyl acetate fraction, and methyl gallate (1) and four flavonoids: fustin (2), fisetin (3), butin (4) and sulfuretin (5). Among them, fisetin (3) exhibited high antiviral activities against both IHNV and VHSV showing EC50 values of 27.1 and 33.3 μM with selective indices (SI = CC50/EC50) more than 15, respectively. Fustin (2) and sulfuretin (5) displayed significant antiviral activities showing EC50 values of 91.2– 197.3 μM against IHNV and VHSV. In addition, the antiviral activity of fisetin against IHNV and VHSV occurred up to 5 hr post-infection and was not associated with direct virucidal effects in a timed addition study using a plaque reduction assay. These results suggested that the bark of R. verniciflua and isolated flavonoids have significant anti-viral activity against IHNV and VHSV, and also have potential to be used as anti-viral therapeutics against fish viral diseases.

Citations

Citations to this article as recorded by  
  • Transcriptomic profiling provides new insights into the intricate regulation of immune pathways in response to largemouth bass virus (LMBV) infection
    Jing Chen, Xue-Mei Yuan, Lei Huang, Xiao-Hong Huang, Xian-Qi Peng, Xia-Lian Bu, Jin-Biao Jiao, Jia-Yun Yao
    Aquaculture International.2025;[Epub]     CrossRef
  • Optimization of Ultrasonic-Assisted Extraction of Diene Urushiol from Lacquer Tree Leaves Using Response Surface Methodology
    Fengming Xia, Haojiang He, Jize Ma, Yutian Jin, Qing Qiao, Peng Long, Ping Li, Rui Sun
    Molecules.2025; 30(8): 1663.     CrossRef
  • Polyphenols as antiviral agents: Assessing their potential usage and benefits in aquaculture
    Zainab Manzoor, Amara Sajad, Syed Shariq Nazir Qadiri, Feroz Ahmad Shah, Shabir Ahmad Dar, Shahid Manzoor Mandu
    Aquaculture International.2025;[Epub]     CrossRef
  • Fermented sunflower meal in diets for Atlantic salmon under commercial-like farming conditions promotes gut lactic acid bacteria and controls inflammation in the distal intestine
    Linn Haug Eide, Byron Morales-Lange, Raoul Valentin Kuiper, Ole Bendik Dale, Sérgio D.C. Rocha, Brankica Djordjevic, Margareth Øverland
    Aquaculture.2025; 595: 741517.     CrossRef
  • A tetrazole-based immunomodulator confers mitochondrial protection and enhances host resistance against IHNV in rainbow trout
    Hui Zhang, Lili Zhu, Qinying Li, Hanwen Zheng, Yuting Dai, Xiaofeng Han, Guanglu Liu
    Fish & Shellfish Immunology.2025; 166: 110589.     CrossRef
  • Antiviral activity of epicatechin against Singapore grouper iridovirus in vitro and in vivo
    Lin Huang, Jihui Kuang, Jieying Yu, Qing Yu, Weiqiang Xu, Mingzhu Liu, Yunyi Wei, Shuyu Han, Yanhua Huang, Pengfei Li
    Fish & Shellfish Immunology.2025; 162: 110331.     CrossRef
  • Sulfuretin: Unraveling its potent therapeutic potential in a holistic literature review
    Mei-Chen Li, Jing-Jing Liu, Jie Liu, Hong-Yun Bai, Ming-Ming Zhao, Jian-Yu Liu, Yong-Nan Xu, Xu-Hong Ren
    Fitoterapia.2025; 182: 106490.     CrossRef
  • Herbal remedies in aquaculture: efficacy, risks, and the need for quality assurance
    Mahdi Banaee, Deepa Sharma, Reshma Sinha, Nikola Mikušková, Josef Velíšek, Caterina Faggio
    Aquaculture International.2025;[Epub]     CrossRef
  • Transcriptomic Analysis Reveals the Inhibitory Mechanism of Fisetin Against the Pathogenicity of Aeromonas hydrophila
    Jing Dong, Xinwei Ma, Shengping Li, Shun Zhou, Qiuhong Yang, Xiaohui Ai
    Animals.2025; 15(16): 2415.     CrossRef
  • Fisetin as a multifunctional bioactive flavonoid: A comprehensive review of its pharmacology, mechanism of action, safety profile, clinical trials, and future directions in therapeutics
    Sara Khan, Mohd Muazzam Khan, Badruddeen, Usama Ahmad, Salman Khan
    Food Bioscience.2025; 73: 107620.     CrossRef
  • Antiviral activity of arctigenin against Chinese rice-field eel rhabdovirus in Monopterus albus
    Yisha Liu, Mingyang Xue, Chen Xu, Yong Zhou, Nan Jiang, Yan Meng, Yiqun Li, Zhenyu Huang, Wenzhi Liu, Qiwang Zhong, Zhong Li, Yuding Fan
    Aquaculture.2025; 595: 741574.     CrossRef
  • Antiviral effects of Alpinone on Atlantic salmon (Salmo salar) infected with the infectious pancreatic necrosis virus
    Paz Basualto-Díaz, Almendra Benavides, Daniela Gutierrez, Nadia Epuyao, Brenda Modak, Mónica Imarai, Beatriz Valenzuela
    Comparative Immunology Reports.2025; 9: 200239.     CrossRef
  • A comprehensive review of medicinal Toxicodendron (Anacardiaceae): Botany, traditional uses, phytochemistry and pharmacology
    Xian Hu, Miaomiao Wang, Fei Cai, Liya Liu, Zhuo Cheng, Jiaqi Zhao, Qing Zhang, Chunlin Long
    Journal of Ethnopharmacology.2024; 318: 116829.     CrossRef
  • Antiviral activity of the coumarin derivative scoparone against viral hemorrhagic septicemia virus in vitro and in the olive flounder Paralichthys olivaceus
    Walimuni Randika Harshan Mendis, Jae-Woong Lim, Ga-Won Kim, So Young Kang
    Aquaculture.2024; 585: 740703.     CrossRef
  • Identification of novel potential inhibitors of monkeypox virus thymidine kinase using molecular docking, molecular dynamics simulation and MM/PBSA methods
    Tooba Abdizadeh
    Molecular Diversity.2024; 28(4): 2513.     CrossRef
  • Study on the immune enhancers against Micropterus salmoides rhabdovirus infection
    Ning Lei, Chaonan Zhang, Yanchao Wang, Junjie Zhu
    Journal of Limnology.2024;[Epub]     CrossRef
  • The antiviral activity of currently used medicinal plants in aquaculture and structure–activity relationship of their active ingredients
    Yang Hu, Xu Zhang, Li‐peng Shan, Lei Liu, Jiong Chen
    Reviews in Aquaculture.2024; 16(1): 154.     CrossRef
  • Antiviral effects of umbelliferone against viral hemorrhagic septicemia virus in olive flounder (Paralichthys olivaceus)
    Walimuni Randika Harshan Mendis, Jae-Woong Lim, Sung-Ju Jung, So Young Kang
    Fish & Shellfish Immunology.2024; 152: 109767.     CrossRef
  • Investigation of phytochemicals isolated from selected Saudi medicinal plants as natural inhibitors of SARS CoV-2 main protease: In vitro, molecular docking and simulation analysis
    Yousef T.M. Alharbi, Wael M. Abdel-Mageed, Omer A. Basudan, Ramzi A. Mothana, Md Tabish Rehman, Ali A. ElGamal, Ali S. Alqahtani, Omer I. Fantoukh, Mohamed F. AlAjmi
    Saudi Pharmaceutical Journal.2024; 32(5): 102023.     CrossRef
  • In-vitro immunomodulatory responses and antiviral activities of antimicrobial peptide octominin against fish pathogenic viruses
    Mawalle Kankanamge Hasitha Madhawa Dias, E.H.T. Thulshan Jayathilaka, Shan Lakmal Edirisinghe, Jae-Woong Lim, Chamilani Nikapitiya, So Young Kang, Ilson Whang, Mahanama De Zoysa
    Fish & Shellfish Immunology.2023; 142: 109129.     CrossRef
  • Anti-inflammatory constituents from Bidens tripartita
    Lihong Jiang, Hefei Wang, Bangyong Wang, Qingang Tan
    Tetrahedron Letters.2023; 130: 154767.     CrossRef
  • Protective effect of fustin against adjuvant-induced arthritis through the restoration of proinflammatory response and oxidative stress
    Sultan Alshehri, Shareefa A. AlGhamdi, Amira M. Alghamdi, Syed Sarim Imam, Wael A. Mahdi, Mohammad A. Almaniea, Baraa Mohammed Hajjar, Fahad A. Al-Abbasi, Nadeem Sayyed, Imran Kazmi
    PeerJ.2023; 11: e15532.     CrossRef
  • Kaempferol is a novel antiviral agent against channel catfish virus infection through blocking viral attachment and penetration in vitro
    Kai Hao, Yu Wang, Jie Hua Xu, ChunLan Nie, SiYang Song, Fei Yu, Zhe Zhao
    Frontiers in Veterinary Science.2023;[Epub]     CrossRef
  • Flavonoids: A Reservoir of Drugs from Nature
    Ali Mohammed Malla, Bashir Ahmad Dar, Abdulgalim B. Isaev, Yaqoob Lone, Mudasir Rashid Banday
    Mini-Reviews in Medicinal Chemistry.2023; 23(7): 772.     CrossRef
  • Exploring the roles of phytobiotics in relieving the impacts of Edwardsiella tarda infection on fish: a mini-review
    Khang Wen Goh, Zulhisyam Abdul Kari, Wendy Wee, Nik Nur Azwanida Zakaria, Mohammad Mijanur Rahman, Muhammad Anamul Kabir, Noor Khalidah Abdul Hamid, Albaris B. Tahiluddin, Ahmad Syazni Kamarudin, Guillermo Téllez–Isaías, Lee Seong Wei
    Frontiers in Veterinary Science.2023;[Epub]     CrossRef
  • Review on the Antiviral Organic Agents against Fish Rhabdoviruses
    Shuang-Shuang Sun, Shi-Wei Ma, Jun Li, Qin Zhang, Guang-Zhou Zhou
    Fishes.2023; 8(1): 57.     CrossRef
  • Novel anti‑hepatitis B virus flavonoids sakuranetin and velutin fromRhus retinorrhoea
    Sarfaraz Ahmed, Mohammad Parvez, Mohammed Al‑Dosari, Mazin Abdelwahid, Tawfeq Alhowiriny, Adnan Al‑Rehaily
    Molecular Medicine Reports.2023;[Epub]     CrossRef
  • An antiviral optimized extract from Sanguisorba officinalis L. roots using response surface methodology, and its efficacy in controlling viral hemorrhagic septicemia of olive flounder (Paralichthys olivaceus)
    Jae-Woong Lim, Joong-Kyeong Seo, Sung-Ju Jung, Ki Yong Lee, So Young Kang
    Fish & Shellfish Immunology.2023; 141: 109066.     CrossRef
  • Alpinone: A positive regulator molecule of immune antiviral response in Atlantic salmon kidney cells
    Almendra Benavides, Daniela Gutiérrez, Nadia Epuyao, Brenda Modak, Mónica Imarai, Beatriz Valenzuela
    Developmental & Comparative Immunology.2022; 126: 104262.     CrossRef
  • In Vitro Validation of Camphene as a Potential Antiviral Agent Against Betanodavirus Causing Viral Nervous Necrosis in Barramundi
    Ruby Singh, Prachi Srivastava, Anand Deepika, Pani K. Prasad
    Anti-Infective Agents.2022;[Epub]     CrossRef
  • Novel anti‑hepatitis B virus‑active catechin and epicatechin fromRhus tripartita
    Mohammad Parvez, Mohammed Al‑Dosari, Mazin Abdelwahid, Ali Alqahtani, Abdullah Alanzi
    Experimental and Therapeutic Medicine.2022;[Epub]     CrossRef
  • Phytocompounds as an Alternative Antimicrobial Approach in Aquaculture
    Naqiuddin Nik Mohamad Nek Rahimi, Ikhsan Natrah, Jiun-Yan Loh, Francis Kumar Ervin Ranzil, Madi Gina, Swee-Hua Erin Lim, Kok-Song Lai, Chou-Min Chong
    Antibiotics.2022; 11(4): 469.     CrossRef
  • The effective components of herbal medicines used for prevention and control of fish diseases
    Weini Zhang, Jinpeng Zhao, Yufang Ma, Jian Li, Xinhua Chen
    Fish & Shellfish Immunology.2022; 126: 73.     CrossRef
  • Review of Medicinal Plants and Active Pharmaceutical Ingredients against Aquatic Pathogenic Viruses
    Wenyu Liao, Lin Huang, Shuyu Han, Dasheng Hu, Youhou Xu, Mingzhu Liu, Qing Yu, Shuaishuai Huang, Dongdong Wei, Pengfei Li
    Viruses.2022; 14(6): 1281.     CrossRef
  • Identification of Five Flavonoid Compounds from the Remaining Ginger Powder Purified by Using High-Speed Counter-Current Chromatography and Their Bioactivity
    Li-xia Wang, Chen Hu, Jia-di Zhang, Pi-sen Gong, Hui Zhang, Shao-hua Zhao
    Food Analytical Methods.2022; 15(2): 485.     CrossRef
  • Cytotoxic Activity of Zinc Oxide Nanoparticles Mediated by Euphorbia Retusa
    Abdulsalam A. Alqahtani, Gouda H. Attia, Abdelbaset Elgamal, Mohamed Aleraky, Mahmoud Youns, Ammar M. Ibrahim, Randa Abdou, Ibrahim Ahmed Shaikh, Mohamed A. El Raey
    Crystals.2022; 12(7): 903.     CrossRef
  • Bioactive Aurones, Indanones, and Other Hemiindigoid Scaffolds: Medicinal Chemistry and Photopharmacology Perspectives
    Leticia M. Lazinski, Guy Royal, Maxime Robin, Marc Maresca, Romain Haudecoeur
    Journal of Medicinal Chemistry.2022; 65(19): 12594.     CrossRef
  • Effect of detoxified Rhus verniciflua extract on oxidative stability and quality improvement of raw chicken breast during cold storage
    Farouq Heidar Barido, Sung Ki Lee
    Journal of Animal Science and Technology.2022; 64(2): 380.     CrossRef
  • Viral infections in cultured fish and shrimps: current status and treatment methods
    Haimanti Mondal, Natarajan Chandrasekaran, Amitava Mukherjee, John Thomas
    Aquaculture International.2022; 30(1): 227.     CrossRef
  • Antibacterial Activities of Prenylated Isoflavones from Maclura tricuspidata against Fish Pathogenic Streptococcus: Their Structure-Activity Relationships and Extraction Optimization
    Jae-Woong Lim, Yang Hee Jo, Ji-Seok Choi, Mi Kyeong Lee, Ki Yong Lee, So Young Kang
    Molecules.2021; 26(24): 7451.     CrossRef
  • Sulfuretin exerts diversified functions in the processing of amyloid precursor protein
    Jian Chen, Biao Luo, Bi-Rou Zhong, Kun-Yi Li, Qi-Xin Wen, Li Song, Xiao-Jiao Xiang, Gui-Feng Zhou, Li-Tian Hu, Xiao-Juan Deng, Yuan-Lin Ma, Guo-Jun Chen
    Genes & Diseases.2021; 8(6): 867.     CrossRef
  • Challenges and Solutions to Viral Diseases of Finfish in Marine Aquaculture
    Kizito K. Mugimba, Denis K. Byarugaba, Stephen Mutoloki, Øystein Evensen, Hetron M. Munang’andu
    Pathogens.2021; 10(6): 673.     CrossRef
  • Polyphenols Sourced from Terrestrial and Marine Plants as Coronavirus Reproduction Inhibitors
    N. N. Besednova, B. G. Andryukov, T. S. Zaporozhets, T. A. Kuznetsova, S. P. Kryzhanovskiy, L. N. Fedyanina, I. D. Makarenkova, I. V. Galkina, M. Yu. Shchelkanov
    Antibiotics and Chemotherapy.2021; 66(3-4): 62.     CrossRef
  • Flavonoids against the SARS-CoV-2 induced inflammatory storm
    Alena Liskova, Marek Samec, Lenka Koklesova, Samson M. Samuel, Kevin Zhai, Raghad Khalid Al-Ishaq, Mariam Abotaleb, Vladimir Nosal, Karol Kajo, Milad Ashrafizadeh, Ali Zarrabi, Aranka Brockmueller, Mehdi Shakibaei, Peter Sabaka, Ioana Mozos, David Ullrich
    Biomedicine & Pharmacotherapy.2021; 138: 111430.     CrossRef
  • Structure-based virtual screening of bioactive compounds from Indonesian medical plants against severe acute respiratory syndrome coronavirus-2
    Maria Apriliani Gani, Ahmad Dzulfikri Nurhan, Saipul Maulana, Siswandono Siswodihardjo, Dewi Wara Shinta, Junaidi Khotib
    Journal of Advanced Pharmaceutical Technology & Research.2021; 12(2): 120.     CrossRef
  • Compilation of antiviral treatments and strategies to fight fish viruses
    Patricia Pereiro, Antonio Figueras, Beatriz Novoa
    Reviews in Aquaculture.2021; 13(3): 1223.     CrossRef
  • α-Lipoic Acid Exerts Its Antiviral Effect against Viral Hemorrhagic Septicemia Virus (VHSV) by Promoting Upregulation of Antiviral Genes and Suppressing VHSV-Induced Oxidative Stress
    Wanwan Zhang, Xiaoqi Chen, Fangzhao Yu, Fengquan Li, Wangdong Li, Meisheng Yi, Kuntong Jia
    Virologica Sinica.2021; 36(6): 1520.     CrossRef
  • Could Sumac Be Effective on COVID-19 Treatment?
    Hasan Korkmaz
    Journal of Medicinal Food.2021; 24(6): 563.     CrossRef
  • Traditional uses, phytochemistry, and pharmacology of Toxicodendron vernicifluum (Stokes) F.A. Barkley - A review
    Mei-Chen Li, Yun-Qiang Zhang, Cai-Wen Meng, Jin-Gou Gao, Chao-Jie Xie, Jian-Yu Liu, Yong Nan Xu
    Journal of Ethnopharmacology.2021; 267: 113476.     CrossRef
  • De novo biosynthesis of garbanzol and fustin in Streptomyces albus based on a potential flavanone 3‐hydroxylase with 2‐hydroxylase side activity
    Laura Marín, Ignacio Gutiérrez‐del‐Río, Claudio Jesús Villar, Felipe Lombó
    Microbial Biotechnology.2021; 14(5): 2009.     CrossRef
  • Anti-parasitic effect of lacquer tree Rhus verniciflua Stokes lignum against Miamiensis avidus (Ciliophora: Scuticociliatida)
    Su-Mi Shin, Jae-Woong Lim, So Young Kang, Mi Kyeong Lee, Sung-Ju Jung
    Aquaculture.2021; 535: 736342.     CrossRef
  • Natural products isolated from Casimiroa
    Khun Nay Win Tun, Nanik Siti Aminah, Alfinda Novi Kristanti, Hnin Thanda Aung, Yoshiaki Takaya
    Open Chemistry.2020; 18(1): 778.     CrossRef
  • Anti-Influenza Activity of an Ethyl Acetate Fraction of a Rhus verniciflua Ethanol Extract by Neuraminidase Inhibition
    Young Soo Kim, Wei Li, Ji Hye Kim, Hwan-Suck Chung, Jang-Gi Choi, Bonggi Lee
    Oxidative Medicine and Cellular Longevity.2020; 2020: 1.     CrossRef
  • Antioxidant and α-glucosidase inhibitiory activity of Cercis chinensis flowers
    Juanjuan Zhang, Li Zhou, Lili Cui, Zhenhua Liu, Jinfeng Wei, Wenyi Kang
    Food Science and Human Wellness.2020; 9(4): 313.     CrossRef
  • Bacillus subtilis Inhibits Viral Hemorrhagic Septicemia Virus Infection in Olive Flounder (Paralichthys olivaceus) Intestinal Epithelial Cells
    So-Ri Han, Hetron M. Munang’andu, In-Kyu Yeo, Sung-Hyun Kim
    Viruses.2020; 13(1): 28.     CrossRef
  • Chemical constituents from the heartwood of Toxicodendron vernicifluum (Stokes) F.A. Barkley
    Mei Chen Li, Chao Jie Xie, Jin Gou Gao, Cai Wen Meng, Yuan Jiang He, Jian Yu Liu, Yong Nan Xu
    Biochemical Systematics and Ecology.2020; 90: 104017.     CrossRef
  • The protective effects of vernicilignan A, a new flavonolignan isolated from Toxicodendron vernicifluum on SH-SY5Y cells against oxidative stress-induced injury
    Meichen Li, Yanhua Fan, Ting Zhong, Ping Yi, Chengcheng Fan, Andong Wang, Jianyu Liu, Yongnan Xu
    Fitoterapia.2019; 134: 81.     CrossRef
  • Ursolic acid from Prunella vulgaris L. efficiently inhibits IHNV infection in vitro and in vivo
    Bo-Yang Li, Yang Hu, Jian Li, Kai Shi, Yu-Feng Shen, Bin Zhu, Gao-Xue Wang
    Virus Research.2019; 273: 197741.     CrossRef
  • Optimization of antibacterial extract from lacquer tree (Rhus verniciflua Stokes) using response surface methodology and its efficacy in controlling edwardsiellosis of olive flounder (Paralichthys olivaceus)
    Jae-Woong Lim, Su-Mi Shin, Sung-Ju Jung, Mi Kyeong Lee, So Young Kang
    Aquaculture.2019; 502: 40.     CrossRef
  • Synthesis and antiviral activity of a new arctigenin derivative against IHNV in vitro and in vivo
    Yang Hu, Wei-Chao Chen, Yu-Feng Shen, Bin Zhu, Gao-Xue Wang
    Fish & Shellfish Immunology.2019; 92: 736.     CrossRef
  • In Vitro Biocidal Actions of Rhus verniciflua Bark Extract Wrapped Gold Nanoballs Against Biofilm-Forming Food-Borne Bacterial Pathogens
    Sekar Vijayakumar, Kandasamy Saravanakumar, Xiaowen Hu, Myeong-Hyeon Wang
    Journal of Cluster Science.2019; 30(6): 1489.     CrossRef
  • Rise of the killer plants: investigating the antimicrobial activity of Australian plants to enhance biofilter-mediated pathogen removal
    P. Galbraith, R. Henry, D. T. McCarthy
    Journal of Biological Engineering.2019;[Epub]     CrossRef
  • Comparison of antibacterial activity and phenolic constituents of bark, lignum, leaves and fruit of Rhus verniciflua
    Jae Young Jang, Hyeji Shin, Jae-Woong Lim, Jong Hoon Ahn, Yang Hee Jo, Ki Yong Lee, Bang Yeon Hwang, Sung-Ju Jung, So Young Kang, Mi Kyeong Lee, Vijai Gupta
    PLOS ONE.2018; 13(7): e0200257.     CrossRef
  • Alpinone exhibited immunomodulatory and antiviral activities in Atlantic salmon
    Beatriz Valenzuela, Felipe E. Rodríguez, Brenda Modak, Mónica Imarai
    Fish & Shellfish Immunology.2018; 74: 76.     CrossRef
  • Dihydrofisetin exerts its anti-inflammatory effects associated with suppressing ERK/p38 MAPK and Heme Oxygenase-1 activation in lipopolysaccharide-stimulated RAW 264.7 macrophages and carrageenan-induced mice paw edema
    Kai Kai Li, Shan Shan Shen, Xiangyi Deng, Hoi Ting Shiu, Wing Sum Siu, Ping Chung Leung, Chun Hay Ko, Bao Hui Cheng
    International Immunopharmacology.2018; 54: 366.     CrossRef
  • Antimicrobial activity and active compounds of a Rhus verniciflua Stokes extract
    Jinfeng Yang, Yong Soo Kwon, Myong Jo Kim
    Zeitschrift für Naturforschung C.2018; 73(11-12): 457.     CrossRef
  • Heartwood extract of Rhus verniciflua Stokes and its active constituent fisetin attenuate vasoconstriction through calcium-dependent mechanism in rat aorta
    Jung-Min Park, Jun-Hyeong Lee, Chun-Soo Na, Dongho Lee, Jin-Yong Lee, Masahiko Satoh, Moo-Yeol Lee
    Bioscience, Biotechnology, and Biochemistry.2016; 80(3): 493.     CrossRef
  • On the difference in decomposition of taxifolin and luteolin vs. fisetin and quercetin in aqueous media
    Romana Sokolová, Šárka Ramešová, Jana Kocábová, Viliam Kolivoška, Ilaria Degano, Emanuela Pitzalis
    Monatshefte für Chemie - Chemical Monthly.2016; 147(8): 1375.     CrossRef
  • Fisetin-Rich Extracts ofRhus vernicifluaStokes Improve Blood Flow Rates in Mice Fed Both Normal and High-Fat Diets
    Won Kyun Im, Hyun Jung Park, Kwang Soo Lee, Jung Hoon Lee, Young Dong Kim, Kyeong-Hee Kim, Sang-Jae Park, Seokmann Hong, Sung Ho Jeon
    Journal of Medicinal Food.2016; 19(2): 120.     CrossRef
  • Metabolic Engineering of Escherichia coli for Astragalin Biosynthesis
    Jianjun Pei, Ping Dong, Tao Wu, Linguo Zhao, Xianying Fang, Fuliang Cao, Feng Tang, Yongde Yue
    Journal of Agricultural and Food Chemistry.2016; 64(42): 7966.     CrossRef
  • The study of the oxidation of the natural flavonol fisetin confirmed quercetin oxidation mechanism
    Šárka Ramešová, Romana Sokolová, Ilaria Degano
    Electrochimica Acta.2015; 182: 544.     CrossRef
  • Comparison of the Flavonoid and Urushiol Content in Different Parts of Rhus verniciflua Stokes Grown in Wonju and Okcheon
    Won-Jae Lee, Ji-Eun Kang, Ji-Ho Choi, Seok-Tae Jeong, Myung-Kon Kim, Han-Seok Choi
    Korean Journal of Food Science and Technology.2015; 47(2): 158.     CrossRef
  • Antiplatelet Effects ofRhus vernicifluaStokes Heartwood and Its Active Constituents—Fisetin, Butein, and Sulfuretin—in Rats
    Jun-Hyeong Lee, Mikyung Kim, Kyung-Hwa Chang, Cheol Yi Hong, Chun-Soo Na, Mi-Sook Dong, Dongho Lee, Moo-Yeol Lee
    Journal of Medicinal Food.2015; 18(1): 21.     CrossRef
  • Metabolic engineering of Escherichia coli into a versatile glycosylation platform: production of bio-active quercetin glycosides
    Frederik De Bruyn, Maarten Van Brempt, Jo Maertens, Wouter Van Bellegem, Dries Duchi, Marjan De Mey
    Microbial Cell Factories.2015;[Epub]     CrossRef
  • Assembly of a novel biosynthetic pathway for production of the plant flavonoid fisetin in Escherichia coli
    Steen G. Stahlhut, Solvej Siedler, Sailesh Malla, Scott J. Harrison, Jérôme Maury, Ana Rute Neves, Jochen Forster
    Metabolic Engineering.2015; 31: 84.     CrossRef
  • Melatonin Enhances the Anti-Tumor Effect of Fisetin by Inhibiting COX-2/iNOS and NF-κB/p300 Signaling Pathways
    Canhui Yi, Yong Zhang, Zhenlong Yu, Yao Xiao, Jingshu Wang, Huijuan Qiu, Wendan Yu, Ranran Tang, Yuhui Yuan, Wei Guo, Wuguo Deng, Chunhong Yan
    PLoS ONE.2014; 9(7): e99943.     CrossRef
  • Integrating Traditional Medicine into Modern Inflammatory Diseases Care: Multitargeting byRhus vernicifluaStokes
    Ji Hye Kim, Yong Cheol Shin, Seong-Gyu Ko
    Mediators of Inflammation.2014; 2014: 1.     CrossRef
  • Phenolic extractives in the trunk of Toxicodendron vernicifluum: chemical characteristics, contents and radial distribution
    Koh Hashida, Masanobu Tabata, Katsushi Kuroda, Yuichiro Otsuka, Satoshi Kubo, Rei Makino, Yoshitaka Kubojima, Mario Tonosaki, Seiji Ohara
    Journal of Wood Science.2014; 60(2): 160.     CrossRef
  • Antioxidant activity, total phenolic and flavonoid content variation among Tunisian natural populations of Rhus tripartita (Ucria) Grande and Rhus pentaphylla Desf.
    Chetoui Itidel, Messaoud Chokri, Boussaid Mohamed, Zaouali Yosr
    Industrial Crops and Products.2013; 51: 171.     CrossRef
  • Optimization of total flavonoids content extracted from Flos Populi using response surface methodology
    Zun-Lai Sheng, Peng-Fei Wan, Chun-Liu Dong, Yan-Hua Li
    Industrial Crops and Products.2013; 43: 778.     CrossRef
Review
REVIEW] Zika virus: An emerging flavivirus
Sang-Im Yun , Young-Min Lee
J. Microbiol. 2017;55(3):204-219.   Published online February 28, 2017
DOI: https://doi.org/10.1007/s12275-017-7063-6
  • 550 View
  • 0 Download
  • 77 Crossref
AbstractAbstract PDF
Zika virus (ZIKV) is a previously little-known flavivirus closely related to Japanese encephalitis, West Nile, dengue, and yellow fever viruses, all of which are primarily transmitted by blood-sucking mosquitoes. Since its discovery in Uganda in 1947, ZIKV has continued to expand its geographic range, from equatorial Africa and Asia to the Pacific Islands, then further afield to South and Central America and the Caribbean. Currently, ZIKV is actively circulating not only in much of Latin America and its neighbors but also in parts of the Pacific Islands and Southeast Asia. Although ZIKV infection generally causes only mild symptoms in some infected individuals, it is associated with a range of neuroimmunological disorders, including Guillain-Barré syndrome, meningoencephalitis, and myelitis. Recently, maternal ZIKV infection during pregnancy has been linked to neonatal malformations,
result
ing in various degrees of congenital abnormalities, microcephaly, and even abortion. Despite its emergence as an important public health problem, however, little is known about ZIKV biology, and neither vaccine nor drug is available to control ZIKV infection. This article provides a brief introduction to ZIKV with a major emphasis on its molecular virology, in order to help facilitate the development of diagnostics, therapeutics, and vaccines.

Citations

Citations to this article as recorded by  
  • The first possible case of airport Zika virus infection in the EU/EEA
    Jana Kerlik, Ján Hockicko, Mária Avdičová, Monika Musilová, Veronika Tarkovská, Elena Tichá, Hana Zelená
    Travel Medicine and Infectious Disease.2025; 66: 102864.     CrossRef
  • Integrated duplex reverse transcription-recombinase aided amplification (RT-RAA) and lateral flow assay (LFA) for rapid simultaneous detection of Zika virus and Japanese encephalitis virus in single reaction format
    Haolong Cong, Xiaodong Han, Mengyuan Lv, Yutong Chang, Xinyi Wang, Rong Lei
    Talanta.2025; 294: 128195.     CrossRef
  • Neferine inhibits Zika virus replication by targeting viral protease
    Senfeng Sun, Tingting Sun, Xinyu Lei, Fangfei Li, Jing Wang, Rui Zhou, Quanjie Li, Dongrong Yi, Jing Wang, Hongwei Jin, Shan Cen, Shizhong Chen
    Phytomedicine.2025; 146: 157105.     CrossRef
  • In silico Approaches for Investigation of the Natural Therapeutic Agents for Human Papillomavirus: Computer-aided Drug Design Perspective
    Sanjit Boora, Sapna Wadhwa, Sulochana Kaushik, Vatsla Vats, Samander Kaushik
    Anti-Infective Agents.2025;[Epub]     CrossRef
  • Comparison of Five Serological Methods for the Detection of West Nile Virus Antibodies
    Philipp Girl, Kathrin Euringer, Mircea Coroian, Andrei Daniel Mihalca, Johannes P. Borde, Gerhard Dobler
    Viruses.2024; 16(5): 788.     CrossRef
  • Exploring Zika Virus Impact on Endothelial Permeability: Insights into Transcytosis Mechanisms and Vascular Leakage
    Dama Faniriantsoa Henrio Marcellin, Jufang Huang
    Viruses.2024; 16(4): 629.     CrossRef
  • Optimal control problem for mathematical modeling of Zika virus transmission using fractional order derivatives
    Abdelfatah Kouidere, Amine El Bhih, Issam Minifi, Omar Balatif, Khalid Adnaoui
    Frontiers in Applied Mathematics and Statistics.2024;[Epub]     CrossRef
  • Analysis of RNA virus pathogenicity and development of novel prevention methods.
    Ryuta URAKI
    Uirusu.2024; 74(1): 57.     CrossRef
  • Differences in the Membrane-Binding Properties of Flaviviral Nonstructural 1 (NS1) Protein: Comparative Simulations of Zika and Dengue Virus NS1 Proteins in Explicit Bilayers
    Rajagopalan Muthukumaran, Ramasubbu Sankararamakrishnan
    ACS Bio & Med Chem Au.2024; 4(3): 137.     CrossRef
  • Bovine serum albumin nanoparticles containing Poly (I:C) can enhance the neutralizing antibody response induced by envelope protein of Orthoflavivirus zikaense
    Raíne Piva-Amaral, Gabriel Augusto Pires de Souza, João Carlos Vilela Vieira Júnior, Renato Fróes Goulart de Castro, William Permagnani Gozzi, Sergio Pereira Lima Neto, Ana Luisa Cauvilla dos Santos, Helena Pavani Cassiano, Lorena Christine Ferreira da Si
    International Immunopharmacology.2024; 128: 111523.     CrossRef
  • Employing Machine Learning-Based QSAR for Targeting Zika Virus NS3 Protease: Molecular Insights and Inhibitor Discovery
    Hisham N. Altayb, Hanan Ali Alatawi
    Pharmaceuticals.2024; 17(8): 1067.     CrossRef
  • Comparison of Three Chimeric Zika Vaccine Prototypes Developed on the Genetic Background of the Clinically Proven Live-Attenuated Japanese Encephalitis Vaccine SA14-14-2
    Byung-Hak Song, Jordan C. Frank, Sang-Im Yun, Justin G. Julander, Jeffrey B. Mason, Irina A. Polejaeva, Christopher J. Davies, Kenneth L. White, Xin Dai, Young-Min Lee
    International Journal of Molecular Sciences.2024; 26(1): 195.     CrossRef
  • Mice as an Animal Model for Japanese Encephalitis Virus Research: Mouse Susceptibility, Infection Route, and Viral Pathogenesis
    Jordan C. Frank, Byung-Hak Song, Young-Min Lee
    Pathogens.2023; 12(5): 715.     CrossRef
  • Zika Virus: A Comprehensive Review
    Snehal Dilip Kothavale, Rinaj Rasul Attar, S. K. Mohite, Sagar B. Patil
    Research Journal of Pharmacology and Pharmacodynamics.2023; : 24.     CrossRef
  • The Antiviral Potential of AdipoRon, an Adiponectin Receptor Agonist, Reveals the Ability of Zika Virus to Deregulate Adiponectin Receptor Expression
    Daed El Safadi, Grégorie Lebeau, Jonathan Turpin, Christian Lefebvre d’Hellencourt, Nicolas Diotel, Wildriss Viranaicken, Pascale Krejbich-Trotot
    Viruses.2023; 16(1): 24.     CrossRef
  • Synthesis of copaiba (Copaifera officinalis) oil nanoemulsion and the potential against Zika virus: An in vitro study
    Tamara Carvalho, Marcela Guimarães Landim, Maria Letícia Duarte Lima, Cíntia Bittar, Beatriz Carvalho de Araújo Oliveira Faria, Paula Rahal, Milena Campelo Freitas de Lima, Valdir Florêncio da Veiga Junior, Graziella Anselmo Joanitti, Marilia Freitas Calm
    PLOS ONE.2023; 18(9): e0283817.     CrossRef
  • Epidemiological evidence of acute transmission of Zika virus infection in dengue suspected patients in Sri-Lanka
    Mya Myat Ngwe Tun, Sandra Kendra Raini, Lakkumar Fernando, YINS Gunawardene, Shingo Inoue, Yuki Takamatsu, Takeshi Urano, Rohitha Muthugala, Menaka Hapugoda, Kouichi Morita
    Journal of Infection and Public Health.2023; 16(9): 1435.     CrossRef
  • The Drosophila melanogaster prophenoloxidase system participates in immunity against Zika virus infection
    Ghada Tafesh‐Edwards, Ioannis Eleftherianos
    European Journal of Immunology.2023;[Epub]     CrossRef
  • Designing photoaffinity tool compounds for the investigation of the DENV NS2B–NS3 protease allosteric binding pocket
    Hannah Maus, Andrea Gellert, Olivia R. Englert, Jia-Xuan Chen, Tanja Schirmeister, Fabian Barthels
    RSC Medicinal Chemistry.2023; 14(11): 2365.     CrossRef
  • Quinazolinone Compounds Have Potent Antiviral Activity against Zika and Dengue Virus
    Md Ashraf-Uz-Zaman, Xin Li, Yuan Yao, Chandra Bhushan Mishra, Bala Krishna Moku, Yongcheng Song
    Journal of Medicinal Chemistry.2023; 66(15): 10746.     CrossRef
  • Reprogramming of red blood cell metabolism in Zika virus–infected donors
    Alexis Catala, Mars Stone, Michael P. Busch, Angelo D'Alessandro
    Transfusion.2022; 62(5): 1045.     CrossRef
  • Structure-based design of a novel inhibitor of the ZIKA virus NS2B/NS3 protease
    Yanchao Xiong, Fei Cheng, Junyi Zhang, Haixia Su, Hangchen Hu, Yi Zou, Minjun Li, Yechun Xu
    Bioorganic Chemistry.2022; 128: 106109.     CrossRef
  • Host Molecules Regulating Neural Invasion of Zika Virus and Drug Repurposing Strategy
    Li Yin Tan, Thamil Vaani Komarasamy, William James, Vinod R. M. T. Balasubramaniam
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Functional Loop Dynamics and Characterization of the Inactive State of the NS2B-NS3 Dengue Protease due to Allosteric Inhibitor Binding
    Nisha Amarnath Jonniya, Parimal Kar
    Journal of Chemical Information and Modeling.2022; 62(16): 3800.     CrossRef
  • Pandemic influenza A (H1N1) virus causes abortive infection of primary human T cells
    Jiapei Yu, Hui Li, Ju Jia, Zhisheng Huang, Shuai Liu, Ying Zheng, Shengrui Mu, Xiaoyan Deng, Xiaohui Zou, Yeming Wang, Xiao Shang, Dan Cui, Lixue Huang, Xiaoxuan Feng, William J. Liu, Bin Cao
    Emerging Microbes & Infections.2022; 11(1): 1191.     CrossRef
  • Development and characterization of type I interferon receptor knockout sheep: A model for viral immunology and reproductive signaling
    Christopher J. Davies, Zhiqiang Fan, Kira P. Morgado, Ying Liu, Misha Regouski, Qinggang Meng, Aaron J. Thomas, Sang-Im Yun, Byung-Hak Song, Jordan C. Frank, Iuri V. Perisse, Arnaud Van Wettere, Young-Min Lee, Irina A. Polejaeva
    Frontiers in Genetics.2022;[Epub]     CrossRef
  • β-Catenin Restricts Zika Virus Internalization by Downregulating Axl
    Oscar A. Jimenez, Srinivas D. Narasipura, Hannah J. Barbian, Yasmeen A. Albalawi, Melanie S. Seaton, KaReisha F. Robinson, Lena Al-Harthi, Susana López
    Journal of Virology.2021;[Epub]     CrossRef
  • Zika virus endemic challenges during COVID-19 pandemic in Africa
    Abdullahi Tunde Aborode, Mahnoor Sukaina, Harendra Kumar, Tahreem Farooqui, Samar Faheem, Priyanka Chahal, Luay Alkazmi, Helal F. Hetta, Gaber El-Saber Batiha
    Tropical Medicine and Health.2021;[Epub]     CrossRef
  • Deciphering the Role of Extracellular Vesicles Derived from ZIKV-Infected hcMEC/D3 Cells on the Blood–Brain Barrier System
    Antonios Fikatas, Jonas Dehairs, Sam Noppen, Jordi Doijen, Frank Vanderhoydonc, Eef Meyen, Johannes V. Swinnen, Christophe Pannecouque, Dominique Schols
    Viruses.2021; 13(12): 2363.     CrossRef
  • Nanoparticles as Vaccines to Prevent Arbovirus Infection: A Long Road Ahead
    Gabriel Augusto Pires de Souza, Raíssa Prado Rocha, Ricardo Lemes Gonçalves, Cyntia Silva Ferreira, Breno de Mello Silva, Renato Fróes Goulart de Castro, João Francisco Vitório Rodrigues, João Carlos Vilela Vieira Júnior, Luiz Cosme Cotta Malaquias, Jônat
    Pathogens.2021; 10(1): 36.     CrossRef
  • Operationalizing Culturally Responsive Research Practices: Documenting the Communication Skills of Children With Confirmed or Possible Exposure to the Zika Virus in Saint Lucia, West Indies
    Keisha T. Lindsay Nurse, Kim Gardner, Maria R. Brea
    Perspectives of the ASHA Special Interest Groups.2021; 6(1): 191.     CrossRef
  • Synthesis, Structure–Activity Relationships, and Antiviral Activity of Allosteric Inhibitors of Flavivirus NS2B–NS3 Protease
    Shenyou Nie, Yuan Yao, Fangrui Wu, Xiaowei Wu, Jidong Zhao, Yuanda Hua, Jingyu Wu, Tong Huo, Yi-Lun Lin, Alexander R. Kneubehl, Megan B. Vogt, Josephine Ferreon, Rebecca Rico-Hesse, Yongcheng Song
    Journal of Medicinal Chemistry.2021; 64(5): 2777.     CrossRef
  • Zika virus lateral flow assays using reverse transcription-loop-mediated isothermal amplification
    Gna Ahn, SeonHyung Lee, Se Hee Lee, Yun Hee Baek, Min-Suk Song, Yang-Hoon Kim, Ji-Young Ahn
    RSC Advances.2021; 11(29): 17800.     CrossRef
  • CRISPR Tackles Emerging Viral Pathogens
    Emily N. Kirby, Byron Shue, Paul Q. Thomas, Michael R. Beard
    Viruses.2021; 13(11): 2157.     CrossRef
  • Relationship between vertical stratification and feeding habits of mosquito (Diptera: Culicidae) assemblages collected in conservation units in the green belt of the city of São Paulo, Brazil
    Eduardo Evangelista, Antônio Ralph Medeiros-Sousa, Walter Ceretti-Junior, Rafael Oliveira-Christe, Ramon Wilk-da-Silva, Ana Maria Ribeiro de Castro Duarte, Daniel Pagotto Vendrami, Gabriela Cristina de Carvalho, Luis Filipe Mucci, Mauro Toledo Marrelli
    Acta Tropica.2021; 221: 106009.     CrossRef
  • The Geraniin-Rich Extract from Reunion Island Endemic Medicinal Plant Phyllanthus phillyreifolius Inhibits Zika and Dengue Virus Infection at Non-Toxic Effect Doses in Zebrafish
    Juliano G. Haddad, Dovilė Grauzdytė, Andrea Cristine Koishi, Wildriss Viranaicken, Petras Rimantas Venskutonis, Claudia Nunes Duarte dos Santos, Philippe Desprès, Nicolas Diotel, Chaker El Kalamouni
    Molecules.2020; 25(10): 2316.     CrossRef
  • Development, Characterization, and Application of Two Reporter-Expressing Recombinant Zika Viruses
    Sang-Im Yun, Byung-Hak Song, Michael E. Woolley, Jordan C. Frank, Justin G. Julander, Young-Min Lee
    Viruses.2020; 12(5): 572.     CrossRef
  • Field-deployable molecular diagnostic platform for arbovirus detection in Aedes aegypti
    Natalie Rutkowski, Yuemei Dong, George Dimopoulos
    Parasites & Vectors.2020;[Epub]     CrossRef
  • The Molecular Interactions of ZIKV and DENV with the Type-I IFN Response
    Rosa C. Coldbeck-Shackley, Nicholas S. Eyre, Michael R. Beard
    Vaccines.2020; 8(3): 530.     CrossRef
  • Detection of Zika and dengue viruses in wild-caught mosquitoes collected during field surveillance in an environmental protection area in São Paulo, Brazil
    Karolina Morales Barrio-Nuevo, Mariana Sequetin Cunha, Adriana Luchs, Aristides Fernandes, Iray Maria Rocco, Luis Filipe Mucci, Renato Pereira de Souza, Antônio Ralph Medeiros-Sousa, Walter Ceretti-Junior, Mauro Toledo Marrelli, Humberto Lanz-Mendoza
    PLOS ONE.2020; 15(10): e0227239.     CrossRef
  • Future and Perspectives of the Zika Virus: Drug Repurposing as a Powerful Tool for Treatment Insights
    Denise Rampini, Diego Campos Prieto, Ana Luisa Colzi, Renan Vinícius de Araújo, Jeanine Giarolla
    Mini-Reviews in Medicinal Chemistry.2020; 20(18): 1917.     CrossRef
  • An in silico integrative protocol for identifying key genes and pathways useful to understand emerging virus disease pathogenesis
    Gabriel Augusto Pires de Souza, Ezequiel Aparecido Salvador, Fernanda Roza de Oliveira, Luiz Cosme Cotta Malaquias, Jonatas Santos Abrahão, Luiz Felipe Leomil Coelho
    Virus Research.2020; 284: 197986.     CrossRef
  • Development of oncolytic virotherapy: from genetic modification to combination therapy
    Qiaoshuai Lan, Shuai Xia, Qian Wang, Wei Xu, Haiyan Huang, Shibo Jiang, Lu Lu
    Frontiers of Medicine.2020; 14(2): 160.     CrossRef
  • Anti-Zika virus activity and chemical characterization by ultra-high performance liquid chromatography (UPLC-DAD-UV-MS) of ethanol extracts in Tecoma species
    Adriana Cotta Cardoso Reis, Breno Mello Silva, Hélia Maria Marques de Moura, Guilherme Rocha Pereira, Geraldo Célio Brandão
    BMC Complementary Medicine and Therapies.2020;[Epub]     CrossRef
  • Applying a pan-flavivirus RT-qPCR assay in Brazilian public health surveillance
    Mariana Sequetin Cunha, Adriana Luchs, Fabiana Cristina Pereira dos Santos, Giovana Santos Caleiro, Maurício Lacerda Nogueira, Paulo César Maiorka
    Archives of Virology.2020; 165(8): 1863.     CrossRef
  • The range of sampling times affects Zika virus evolutionary rates and divergence times
    Lucia P. Barzilai, Carlos G. Schrago
    Archives of Virology.2019; 164(12): 3027.     CrossRef
  • Prevalence of Zika virus in blood donations: a systematic review and meta-analysis
    Rongfei Liu, Xuanzhuo Wang, Yu Ma, Jianyong Wu, Chen Mao, Lihong Yuan, Jiahai Lu
    BMC Infectious Diseases.2019;[Epub]     CrossRef
  • Discovery, X-ray Crystallography and Antiviral Activity of Allosteric Inhibitors of Flavivirus NS2B-NS3 Protease
    Yuan Yao, Tong Huo, Yi-Lun Lin, Shenyou Nie, Fangrui Wu, Yuanda Hua, Jingyu Wu, Alexander R. Kneubehl, Megan B. Vogt, Rebecca Rico-Hesse, Yongcheng Song
    Journal of the American Chemical Society.2019; 141(17): 6832.     CrossRef
  • Molecular epidemiology of dengue, yellow fever, Zika and Chikungunya arboviruses: An update
    Adriana Higuera, Juan David Ramírez
    Acta Tropica.2019; 190: 99.     CrossRef
  • Crystallographic Snapshots of the Zika Virus NS3 Helicase Help Visualize the Reactant Water Replenishment
    Junnan Fang, Xuping Jing, Guoliang Lu, Yi Xu, Peng Gong
    ACS Infectious Diseases.2019; 5(2): 177.     CrossRef
  • Zika Fever: Development of Diagnostics, Prevention and Treatment
    E. I. Kazachinskaya, D. V. Shan’shin, A. V. Ivanova
    Problems of Particularly Dangerous Infections.2019; (2): 6.     CrossRef
  • Selective Disruption of the Blood–Brain Barrier by Zika Virus
    Ana Rachel Leda, Luc Bertrand, Ibolya Edit Andras, Nazira El-Hage, Madhavan Nair, Michal Toborek
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Vδ2 T-Cells Kill ZIKV-Infected Cells by NKG2D-Mediated Cytotoxicity
    Eleonora Cimini, Alessandra Sacchi, Sara De Minicis, Veronica Bordoni, Rita Casetti, Germana Grassi, Francesca Colavita, Concetta Castilletti, Maria Rosaria Capobianchi, Giuseppe Ippolito, Maria Giovanna Desimio, Margherita Doria, Chiara Agrati
    Microorganisms.2019; 7(9): 350.     CrossRef
  • Distinctive regulatory properties of pyruvate kinase 1 from Aedes aegypti mosquitoes
    Natthida Petchampai, Claribel Murillo-Solano, Jun Isoe, Juan C. Pizarro, Patricia Y. Scaraffia
    Insect Biochemistry and Molecular Biology.2019; 104: 82.     CrossRef
  • Rational Control of Poliovirus RNA-Dependent RNA Polymerase Fidelity by Modulating Motif-D Loop Conformational Dynamics
    Jingjing Shi, Jacob M. Perryman, Xiaorong Yang, Xinran Liu, Derek M. Musser, Alyson K. Boehr, Ibrahim M. Moustafa, Jamie J. Arnold, Craig E. Cameron, David D. Boehr
    Biochemistry.2019; 58(36): 3735.     CrossRef
  • Model System for the Formation of Tick-Borne Encephalitis Virus Replication Compartments without Viral RNA Replication
    Wai-Lok Yau, Van Nguyen-Dinh, Elin Larsson, Richard Lindqvist, Anna K. Överby, Richard Lundmark, Julie K. Pfeiffer
    Journal of Virology.2019;[Epub]     CrossRef
  • Human Coronaviruses and Other Respiratory Viruses: Underestimated Opportunistic Pathogens of the Central Nervous System?
    Marc Desforges, Alain Le Coupanec, Philippe Dubeau, Andréanne Bourgouin, Louise Lajoie, Mathieu Dubé, Pierre J. Talbot
    Viruses.2019; 12(1): 14.     CrossRef
  • Zika Virus Attenuation by Codon Pair Deoptimization Induces Sterilizing Immunity in Mouse Models
    Penghui Li, Xianliang Ke, Ting Wang, Zhongyuan Tan, Dan Luo, Yuanjiu Miao, Jianhong Sun, Yuan Zhang, Yan Liu, Qinxue Hu, Fuqiang Xu, Hanzhong Wang, Zhenhua Zheng, Julie K. Pfeiffer
    Journal of Virology.2018;[Epub]     CrossRef
  • The Recent Epidemic Spread of Zika Virus Disease
    Chang-Kweng Lim
    Uirusu.2018; 68(1): 1.     CrossRef
  • Zika Virus in the Male Reproductive Tract
    Liesel Stassen, Charles W. Armitage, David J. Van der Heide, Kenneth W. Beagley, Francesca D. Frentiu
    Viruses.2018; 10(4): 198.     CrossRef
  • Maternal immunization with a DNA vaccine candidate elicits specific passive protection against post-natal Zika virus infection in immunocompetent BALB/c mice
    Ran Wang, Xianzheng Liao, Dongying Fan, Lei Wang, Ji Song, Kaihao Feng, Mingyuan Li, Peigang Wang, Hui Chen, Jing An
    Vaccine.2018; 36(24): 3522.     CrossRef
  • Zika knowledge and preventive practices among reproductive-age women from Lambayeque, Peru
    Sara J. Burgos-Muñoz, Carlos J. Toro-Huamanchumo
    European Journal of Obstetrics & Gynecology and Reproductive Biology.2018; 228: 255.     CrossRef
  • A panoptic uncovering of the dynamical evolution of the Zika Virus NS5 methyltransferase binding site loops—zeroing in on the molecular landscape
    Nikita Devnarain, Mahmoud E. S. Soliman
    Chemical Biology & Drug Design.2018; 92(5): 1838.     CrossRef
  • Structural view of the helicase reveals thatZika virususes a conserved mechanism for unwinding RNA
    Lei Li, Jin Wang, Zhihui Jia, Neil Shaw
    Acta Crystallographica Section F Structural Biology Communications.2018; 74(4): 205.     CrossRef
  • Functional Genomics and Immunologic Tools: The Impact of Viral and Host Genetic Variations on the Outcome of Zika Virus Infection
    Sang-Im Yun, Byung-Hak Song, Jordan C. Frank, Justin G. Julander, Aaron L. Olsen, Irina A. Polejaeva, Christopher J. Davies, Kenneth L. White, Young-Min Lee
    Viruses.2018; 10(8): 422.     CrossRef
  • Comparative analysis of different cell systems for Zika virus (ZIKV) propagation and evaluation of anti-ZIKV compounds in vitro
    Ilaria Vicenti, Adele Boccuto, Alessia Giannini, Filippo Dragoni, Francesco Saladini, Maurizio Zazzi
    Virus Research.2018; 244: 64.     CrossRef
  • The use of humanized mice for studies of viral pathogenesis and immunity
    Florian Douam, Alexander Ploss
    Current Opinion in Virology.2018; 29: 62.     CrossRef
  • Immunization with phage virus-like particles displaying Zika virus potential B-cell epitopes neutralizes Zika virus infection of monkey kidney cells
    Rupsa Basu, Lukai Zhai, Alice Contreras, Ebenezer Tumban
    Vaccine.2018; 36(10): 1256.     CrossRef
  • Human Sertoli cells support high levels of Zika virus replication and persistence
    Anil Kumar, Juan Jovel, Joaquin Lopez-Orozco, Daniel Limonta, Adriana M. Airo, Shangmei Hou, Iryna Stryapunina, Chad Fibke, Ronald B. Moore, Tom C. Hobman
    Scientific Reports.2018;[Epub]     CrossRef
  • Identification of genetic variants associated with dengue or West Nile virus disease: a systematic review and meta-analysis
    Megan E. Cahill, Samantha Conley, Andrew T. DeWan, Ruth R. Montgomery
    BMC Infectious Diseases.2018;[Epub]     CrossRef
  • Zika virus and autoimmunity. One-step forward
    Diana M. Monsalve, Yovana Pacheco, Yeny Acosta-Ampudia, Yhojan Rodríguez, Carolina Ramírez-Santana, Juan-Manuel Anaya
    Autoimmunity Reviews.2017; 16(12): 1237.     CrossRef
  • Recombinant Zika NS1 Protein Secreted from Vero Cells Is Efficient for Inducing Production of Immune Serum Directed against NS1 Dimer
    Wildriss Viranaicken, Alexia Ndebo, Sandra Bos, Philippe Souque, Gilles Gadea, Chaker El-Kalamouni, Pascale Krejbich-Trotot, Pierre Charneau, Philippe Desprès, Marjolaine Roche
    International Journal of Molecular Sciences.2017; 19(1): 38.     CrossRef
  • Differential diagnosis of multiple sclerosis in Latin America
    YD Fragoso, FG Elso, A Carrá
    Multiple Sclerosis Journal - Experimental, Translational and Clinical.2017;[Epub]     CrossRef
  • Microglia at center stage: a comprehensive review about the versatile and unique residential macrophages of the central nervous system
    Nils Lannes, Elisabeth Eppler, Samar Etemad, Peter Yotovski, Luis Filgueira
    Oncotarget.2017; 8(69): 114393.     CrossRef
  • Prior Dengue Virus Exposure Shapes T Cell Immunity to Zika Virus in Humans
    Alba Grifoni, John Pham, John Sidney, Patrick H. O'Rourke, Sinu Paul, Bjoern Peters, Sheridan R. Martini, Aruna D. de Silva, Michael J. Ricciardi, Diogo M. Magnani, Cassia G. T. Silveira, Alvino Maestri, Priscilla R. Costa, Luzia Maria de-Oliveira-Pinto,
    Journal of Virology.2017;[Epub]     CrossRef
  • Brain grants permission of access to Zika virus but denies entry to drugs: a molecular modeling perspective to infiltrate the boundary
    Nikita Devnarain, Pritika Ramharack, Mahmoud E. Soliman
    RSC Adv..2017; 7(75): 47416.     CrossRef
  • Structures and Functions of the Envelope Glycoprotein in Flavivirus Infections
    Xingcui Zhang, Renyong Jia, Haoyue Shen, Mingshu Wang, Zhongqiong Yin, Anchun Cheng
    Viruses.2017; 9(11): 338.     CrossRef
Journal Article
Machine learning methods for microbiome studies
Junghyun Namkung
J. Microbiol. 2020;58(3):206-216.   Published online February 27, 2020
DOI: https://doi.org/10.1007/s12275-020-0066-8
  • 437 View
  • 1 Download
  • 83 Web of Science
  • 74 Crossref
AbstractAbstract PDF
Researches on the microbiome have been actively conducted worldwide and the results have shown human gut bacterial environment significantly impacts on immune system, psychological conditions, cancers, obesity, and metabolic diseases. Thanks to the development of sequencing technology, microbiome studies with large number of samples are eligible on an acceptable cost nowadays. Large samples allow analysis of more sophisticated modeling using machine learning approaches to study relationships between microbiome and various traits. This article provides an overview of machine learning methods for non-data scientists interested in the association analysis of microbiomes and host phenotypes. Once genomic feature of microbiome is determined, various analysis
methods
can be used to explore the relationship between microbiome and host phenotypes that include penalized regression, support vector machine (SVM), random forest, and artificial neural network (ANN). Deep neural network methods are also touched. Analysis procedure from environment setup to extract analysis results are presented with Python programming language.

Citations

Citations to this article as recorded by  
  • Biodegradation of CAHs and BTEX in groundwater at a multi-polluted pesticide site undergoing natural attenuation: Insights from identifying key bioindicators using machine learning methods based on microbiome data
    Feiyang Xia, Tingting Fan, Mengjie Wang, Lu Yang, Da Ding, Jing Wei, Yan Zhou, Dengdeng Jiang, Shaopo Deng
    Ecotoxicology and Environmental Safety.2025; 291: 117609.     CrossRef
  • Advanced computational tools, artificial intelligence and machine-learning approaches in gut microbiota and biomarker identification
    Tikam Chand Dakal, Caiming Xu, Abhishek Kumar
    Frontiers in Medical Technology.2025;[Epub]     CrossRef
  • Gut microbiota in Alzheimer’s disease: Understanding molecular pathways and potential therapeutic perspectives
    Simone Lista, Antonio Munafò, Filippo Caraci, Camillo Imbimbo, Enzo Emanuele, Piercarlo Minoretti, José Pinto-Fraga, María Merino-País, Paula Crespo-Escobar, Susana López-Ortiz, Giovanni Monteleone, Bruno P. Imbimbo, Alejandro Santos-Lozano
    Ageing Research Reviews.2025; 104: 102659.     CrossRef
  • Artificial intelligence in soil microbiome analysis: a potential application in predicting and enhancing soil health—a review
    Roberta Pace, Vincenzo Schiano Di Cola, Maurilia Maria Monti, Antonio Affinito, Salvatore Cuomo, Francesco Loreto, Michelina Ruocco
    Discover Applied Sciences.2025;[Epub]     CrossRef
  • Canada goose fecal microbiota correlate with geography more than host‐associated factors
    Joshua C. Gil, Heather R. Skeen, Celeste Cuellar, Sarah M. Hird
    Journal of Avian Biology.2025;[Epub]     CrossRef
  • Harnessing the fish gut microbiome and immune system to enhance disease resistance in aquaculture
    Mai A.M. El-Son, Samia Elbahnaswy, Mohsen A. Khormi, Ali M. Aborasain, Hanan H. Abdelhaffez, Eman Zahran
    Fish & Shellfish Immunology.2025; 163: 110394.     CrossRef
  • Deep learning-enhanced wellness scores: A population level study on gut microbiome profiling and health prediction
    Ozkan Ufuk Nalbantoglu, Beyza Hilal Ermis, Aycan Gundogdu
    Biomedical Signal Processing and Control.2025; 110: 108146.     CrossRef
  • micRoclean: an R package for decontaminating low-biomass 16S-rRNA microbiome data
    Rachel Griffard-Smith, Emily Schueddig, Diane E. Mahoney, Prabhakar Chalise, Devin C. Koestler, Dong Pei
    Frontiers in Bioinformatics.2025;[Epub]     CrossRef
  • High-throughput sequencing metabarcoding and network analysis elucidate the effects of soil fumigation and biostimulant on potato yield, rhizoctonia canker, and fungal community
    Honoré Tekeu, Joël D’Astous-Pagé, Thomas Jeanne, Richard Hogue
    Frontiers in Soil Science.2025;[Epub]     CrossRef
  • Application of Predictive Modeling and Molecular Simulations to Elucidate the Mechanisms Underlying the Antimicrobial Activity of Sage (Salvia officinalis L.) Components in Fresh Cheese Production
    Dajana Vukić, Biljana Lončar, Lato Pezo, Vladimir Vukić
    Foods.2025; 14(13): 2164.     CrossRef
  • Computing Two Heuristic Shrinkage Penalized Deep Neural Network Approach
    Mostafa Behzadi, Saharuddin Mohamad, Mahdi Roozbeh, Rossita Yunus, Nor Hamzah
    Mathematical and Computational Applications.2025; 30(4): 86.     CrossRef
  • Differential intestinal microbiome response to heat stress in two rabbit maternal lines: a comparative analysis using Random Forest, BayesC, and PLS-DA
    Iliyass Biada, Francesco Tiezzi, Noelia Ibáñez-Escriche, María Luz García, María José Argente, María Antonia Santacreu
    Journal of Animal Science.2025;[Epub]     CrossRef
  • The urinary microbiome distinguishes symptomatic urinary tract infection from asymptomatic older adult patients presenting to the emergency department
    Evan S. Bradley, Celina Stansky, Abigail L. Zeamer, Ziyuan Huang, Lindsey Cincotta, Abigail Lopes, Linda Potter, Theresa Fontes, Doyle V. Ward, Vanni Bucci, Beth A. McCormick, John P. Haran
    Virulence.2025;[Epub]     CrossRef
  • Association of body index with fecal microbiome in children cohorts with ethnic–geographic factor interaction: accurately using a Bayesian zero-inflated negative binomial regression model
    Jian Huang, Yanzhuan Lu, Fengwei Tian, Yongqing Ni, Cheng Gao, Dong Chen, Luciana Damascena Silva
    mSystems.2024;[Epub]     CrossRef
  • Characteristics of gut microbiota of premature infants in the early postnatal period and their relationship with intraventricular hemorrhage
    Yunlong Zhao, Shan Li, Rui Zhang, Xin Zhang, Qiuyue Shen, Xingyun Zhang, Tian Tian, Xinlin Hou
    BMC Microbiology.2024;[Epub]     CrossRef
  • Development and application of a machine learning-based predictive model for obstructive sleep apnea screening
    Kang Liu, Shi Geng, Ping Shen, Lei Zhao, Peng Zhou, Wen Liu
    Frontiers in Big Data.2024;[Epub]     CrossRef
  • Methodology for biomarker discovery with reproducibility in microbiome data using machine learning
    David Rojas-Velazquez, Sarah Kidwai, Aletta D. Kraneveld, Alberto Tonda, Daniel Oberski, Johan Garssen, Alejandro Lopez-Rincon
    BMC Bioinformatics.2024;[Epub]     CrossRef
  • mi-Mic: a novel multi-layer statistical test for microbiota-disease associations
    Oshrit Shtossel, Shani Finkelstein, Yoram Louzoun
    Genome Biology.2024;[Epub]     CrossRef
  • Understanding Nanoscale Interactions between Minerals and Microbes: Opportunities for Green Remediation of Contaminated Sites
    Tianchi Cao, Yaqi Liu, Cheng Gao, Yuxin Yuan, Wei Chen, Tong Zhang
    Environmental Science & Technology.2024; 58(32): 14078.     CrossRef
  • Harnessing of Artificial Intelligence for the Diagnosis and Prevention of Hospital-Acquired Infections: A Systematic Review
    Buket Baddal, Ferdiye Taner, Dilber Uzun Ozsahin
    Diagnostics.2024; 14(5): 484.     CrossRef
  • A longitudinal study of the gut microbiota during the first three years of life: Links with problem behavior and executive functions at preschool age
    Yvonne Willemsen, Yangwenshan Ou, Clara Belzer, Alejandro Arias Vásquez, Hauke Smidt, Roseriet Beijers, Carolina de Weerth
    Development and Psychopathology.2024; 36(4): 2032.     CrossRef
  • Baseline gut microbiota diversity and composition and albendazole efficacy in hookworm-infected individuals
    Javier Gandasegui, Pedro E. Fleitas, Paula Petrone, Berta Grau-Pujol, Valdemiro Novela, Elisa Rubio, Osvaldo Muchisse, Anélsio Cossa, José Carlos Jamine, Charfudin Sacoor, Eric A. T. Brienen, Lisette van Lieshout, José Muñoz, Climent Casals-Pascual
    Parasites & Vectors.2024;[Epub]     CrossRef
  • Gut bacteriome and mood disorders in women with PCOS
    S Lee, M V Tejesvi, E Hurskainen, O Aasmets, J Plaza-Díaz, S Franks, L Morin-Papunen, J S Tapanainen, T S Ruuska, S Altmäe, E Org, A Salumets, R K Arffman, T T Piltonen
    Human Reproduction.2024; 39(6): 1291.     CrossRef
  • DeepGum: Deep feature transfer for gut microbiome analysis using bottleneck models
    U. Gülfem Elgün Çiftcioğlu, O. Ufuk Nalbanoglu
    Biomedical Signal Processing and Control.2024; 91: 105984.     CrossRef
  • Harnessing meta-omics to unveil and mitigate methane emissions in ruminants: Integrative approaches and future directions
    Yuchao Zhao, Jian Tan, Luoyun Fang, Linshu Jiang
    Science of The Total Environment.2024; 951: 175732.     CrossRef
  • Coordination of Root Traits and Rhizosphere Microbial Community in Tea (Camellia sinensis L.) Plants under Drought and Rehydration
    Sihai Zhang, Xuemei Han, Yangchun Zhu, Xiangfeng Tan
    Forests.2023; 14(11): 2134.     CrossRef
  • Soterobionts: disease-preventing microorganisms and proposed strategies to facilitate their discovery
    Mengcen Wang, Tomislav Cernava
    Current Opinion in Microbiology.2023; 75: 102349.     CrossRef
  • Microbial biomarkers of tree water status for next‐generation biomonitoring of forest ecosystems
    Marine C. Cambon, Marine Trillat, Isabelle Lesur‐Kupin, Régis Burlett, Emilie Chancerel, Erwan Guichoux, Lucie Piouceau, Bastien Castagneyrol, Grégoire Le Provost, Stéphane Robin, Yves Ritter, Inge Van Halder, Sylvain Delzon, David A. Bohan, Corinne Vache
    Molecular Ecology.2023; 32(22): 5944.     CrossRef
  • Conditional Forest Models Built Using Metagenomic Data Accurately Predicted Salmonella Contamination in Northeastern Streams
    Taejung Chung, Runan Yan, Daniel L. Weller, Jasna Kovac, Jeffrey A. Gralnick
    Microbiology Spectrum.2023;[Epub]     CrossRef
  • The gut microbiota as a potential biomarker for methamphetamine use disorder: evidence from two independent datasets
    Linzi Liu, Zijing Deng, Wen Liu, Ruina Liu, Tao Ma, Yifang Zhou, Enhui Wang, Yanqing Tang
    Frontiers in Cellular and Infection Microbiology.2023;[Epub]     CrossRef
  • Machine Learning Algorithms Applied to Predict Autism Spectrum Disorder Based on Gut Microbiome Composition
    Juan M. Olaguez-Gonzalez, Isaac Chairez, Luz Breton-Deval, Mariel Alfaro-Ponce
    Biomedicines.2023; 11(10): 2633.     CrossRef
  • Predicting Personalized Responses to Dietary Fiber Interventions: Opportunities for Modulation of the Gut Microbiome to Improve Health
    Car Reen Kok, Devin Rose, Robert Hutkins
    Annual Review of Food Science and Technology.2023; 14(1): 157.     CrossRef
  • Machine learning: a powerful tool for identifying key microbial agents associated with specific cancer types
    Jia Feng, Kailan Yang, Xuexue Liu, Min Song, Ping Zhan, Mi Zhang, Jinsong Chen, Jinbo Liu
    PeerJ.2023; 11: e16304.     CrossRef
  • Artificial Intelligence: A Promising Tool in Exploring the Phytomicrobiome in Managing Disease and Promoting Plant Health
    Liang Zhao, Sean Walkowiak, Wannakuwattewaduge Gerard Dilantha Fernando
    Plants.2023; 12(9): 1852.     CrossRef
  • Impact of Aging Microbiome on Metabolic Profile of Natural Aging Huangjiu through Machine Learning
    Huakun Yu, Shuangping Liu, Zhilei Zhou, Hongyuan Zhao, Yuezheng Xu, Jian Mao
    Foods.2023; 12(4): 906.     CrossRef
  • An Intelligent and Optimal Deep-Learning Approach in Sensor-Based Networks for Detecting Microbes
    S. Remya, T. Anjali
    IEEE Sensors Journal.2023; 23(17): 19367.     CrossRef
  • Machine learning-guided determination of Acinetobacter density in waterbodies receiving municipal and hospital wastewater effluents
    Temitope C. Ekundayo, Mary A. Adewoyin, Oluwatosin A. Ijabadeniyi, Etinosa O. Igbinosa, Anthony I. Okoh
    Scientific Reports.2023;[Epub]     CrossRef
  • A Microbial-Based Approach to Mental Health: The Potential of Probiotics in the Treatment of Depression
    Dinyadarshini Johnson, Vengadesh Letchumanan, Chern Choong Thum, Sivakumar Thurairajasingam, Learn-Han Lee
    Nutrients.2023; 15(6): 1382.     CrossRef
  • Exploring the role of gut microbiota in advancing personalized medicine
    Gouxin Huang, Raees Khan, Yilin Zheng, Ping-Chin Lee, Qingnan Li, Imran Khan
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Using machine learning models to predict the effects of seasonal fluxes on Plesiomonas shigelloides population density
    Temitope C. Ekundayo, Oluwatosin A. Ijabadeniyi, Etinosa O. Igbinosa, Anthony I. Okoh
    Environmental Pollution.2023; 317: 120734.     CrossRef
  • Next-Generation Sequencing for the Detection of Microbial Agents in Avian Clinical Samples
    Claudio L. Afonso, Anna M. Afonso
    Veterinary Sciences.2023; 10(12): 690.     CrossRef
  • Classification of Microbiome Data from Type 2 Diabetes Mellitus Individuals with Deep Learning Image Recognition
    Juliane Pfeil, Julienne Siptroth, Heike Pospisil, Marcus Frohme, Frank T. Hufert, Olga Moskalenko, Murad Yateem, Alina Nechyporenko
    Big Data and Cognitive Computing.2023; 7(1): 51.     CrossRef
  • EnsDeepDP: An Ensemble Deep Learning Approach for Disease Prediction Through Metagenomics
    Yang Shen, Jinlin Zhu, Zhaohong Deng, Wenwei Lu, Hongchao Wang
    IEEE/ACM Transactions on Computational Biology and Bioinformatics.2023; 20(2): 986.     CrossRef
  • Classifying asthma control using salivary and fecal bacterial microbiome in children with moderate‐to‐severe asthma
    Jelle M. Blankestijn, Alejandro Lopez‐Rincon, Anne H. Neerincx, Susanne J. H. Vijverberg, Simone Hashimoto, Mario Gorenjak, Olaia Sardón Prado, Paula Corcuera‐Elosegui, Javier Korta‐Murua, Maria Pino‐Yanes, Uroš Potočnik, Corinna Bang, Andre Franke, Chris
    Pediatric Allergy and Immunology.2023;[Epub]     CrossRef
  • A new approach of microbiome monitoring in the built environment: feasibility analysis of condensation capture
    Jarrad T. Hampton-Marcell, Aritra Ghosh, Mohamad Jafari Gukeh, Constantine M. Megaridis
    Microbiome.2023;[Epub]     CrossRef
  • Artificial network inference analysis reveals the impact of biostimulant on bacterial communities in fumigated soil for potato production against common scab
    Honoré Tekeu, Thomas Jeanne, Joël D’Astous-Pagé, Richard Hogue
    Frontiers in Soil Science.2023;[Epub]     CrossRef
  • Discriminative Machine Learning Analysis for Skin Microbiome: Observing Biomarkers in Patients with Seborrheic Dermatitis
    H.E.C. van der Wall, R.J. Doll, G.J.P. van Westen, T. Niemeyer-van der Kolk, G. Feiss, H. Pinckaers, M.B.A. van Doorn, T. Nijsten, M.G.H. Sanders, A.F. Cohen, J. Burggraaf, R. Rissmann, L.M. Pardo
    Journal of Artificial Intelligence for Medical Sciences.2022; 3(1-2): 1.     CrossRef
  • Microbial Forensics: A Present to Future Perspective on Genomic Targets, Bioinformatic Challenges, and Applications
    Rachel Shadoff, Mary Anne Panoyan, Nicole Novroski
    Forensic Genomics.2022; 2(2): 42.     CrossRef
  • Robust host source tracking building on the divergent and non-stochastic assembly of gut microbiomes in wild and farmed large yellow croaker
    Jun Zhu, Hao Li, Ze Zhou Jing, Wei Zheng, Yuan Rong Luo, Shi Xi Chen, Feng Guo
    Microbiome.2022;[Epub]     CrossRef
  • Machine learning on the road to unlocking microbiota’s potential for boosting immune checkpoint therapy
    Szymon Wojciechowski, Monika Majchrzak-Górecka, Paweł Biernat, Krzysztof Odrzywołek, Łukasz Pruss, Konrad Zych, Jan Majta, Kaja Milanowska-Zabel
    International Journal of Medical Microbiology.2022; 312(7): 151560.     CrossRef
  • Machine Learning in Nutrition Research
    Daniel Kirk, Esther Kok, Michele Tufano, Bedir Tekinerdogan, Edith J M Feskens, Guido Camps
    Advances in Nutrition.2022; 13(6): 2573.     CrossRef
  • The diagnostic potential and barriers of microbiome based therapeutics
    Animesh Acharjee, Utpreksha Singh, Saptamita Paul Choudhury, Georgios V. Gkoutos
    Diagnosis.2022; 9(4): 411.     CrossRef
  • Microbiome-based personalized nutrition as a result of the 4.0 technological revolution: A mini literature review
    Neslihan Yeşilyurt, Birsen Yılmaz, Duygu Ağagündüz, Raffaele Capasso
    Process Biochemistry.2022; 121: 257.     CrossRef
  • Fecal Microbiota Transplants for Inflammatory Bowel Disease Treatment: Synthetic- and Engineered Communities-Based Microbiota Transplants Are the Future
    Raees Khan, Nazish Roy, Hussain Ali, Muhammad Naeem, Eiji Sakai
    Gastroenterology Research and Practice.2022; 2022: 1.     CrossRef
  • Utilizing stability criteria in choosing feature selection methods yields reproducible results in microbiome data
    Lingjing Jiang, Niina Haiminen, Anna‐Paola Carrieri, Shi Huang, Yoshiki Vázquez‐Baeza, Laxmi Parida, Ho‐Cheol Kim, Austin D. Swafford, Rob Knight, Loki Natarajan
    Biometrics.2022; 78(3): 1155.     CrossRef
  • New-Generation Sequencing Technology in Diagnosis of Fungal Plant Pathogens: A Dream Comes True?
    Maria Aragona, Anita Haegi, Maria Teresa Valente, Luca Riccioni, Laura Orzali, Salvatore Vitale, Laura Luongo, Alessandro Infantino
    Journal of Fungi.2022; 8(7): 737.     CrossRef
  • Machine learning to predict dynamic changes of pathogenic Vibrio spp. abundance on microplastics in marine environment
    Jiawen Jiang, Hua Zhou, Ting Zhang, Chuanyi Yao, Delin Du, Liang Zhao, Wenfang Cai, Liming Che, Zhikai Cao, Xue E Wu
    Environmental Pollution.2022; 305: 119257.     CrossRef
  • MicrobioSee: A Web-Based Visualization Toolkit for Multi-Omics of Microbiology
    JinHui Li, Yimeng Sang, Sen Zeng, Shuming Mo, Zufan Zhang, Sheng He, Xinying Li, Guijiao Su, Jianping Liao, Chengjian Jiang
    Frontiers in Genetics.2022;[Epub]     CrossRef
  • Multi-Omics Strategies for Investigating the Microbiome in Toxicology Research
    Ethan W Morgan, Gary H Perdew, Andrew D Patterson
    Toxicological Sciences.2022; 187(2): 189.     CrossRef
  • Noninvasive early diagnosis of intestinal diseases based on artificial intelligence in genomics and microbiome
    Weitong Zhang, Xingjian Chen, Ka‐Chun Wong
    Journal of Gastroenterology and Hepatology.2021; 36(4): 823.     CrossRef
  • Harnessing machine learning for development of microbiome therapeutics
    Laura E. McCoubrey, Moe Elbadawi, Mine Orlu, Simon Gaisford, Abdul W. Basit
    Gut Microbes.2021;[Epub]     CrossRef
  • Mild Cystic Fibrosis Lung Disease Is Associated with Bacterial Community Stability
    Thomas H. Hampton, Devin Thomas, Christopher van der Gast, George A. O’Toole, Bruce A. Stanton, Amanda G. Oglesby
    Microbiology Spectrum.2021;[Epub]     CrossRef
  • Feature Extension of Gut Microbiome Data for Deep Neural Network-Based Colorectal Cancer Classification
    Mwenge Mulenga, Sameem Abdul Kareem, Aznul Qalid Md Sabri, Manjeevan Seera, Suresh Govind, Chandramathi Samudi, Saharuddin Bin Mohamad
    IEEE Access.2021; 9: 23565.     CrossRef
  • The Effect of Immunobiotic/Psychobiotic Lactobacillus acidophilus Strain INMIA 9602 Er 317/402 Narine on Gut Prevotella in Familial Mediterranean Fever: Gender-Associated Effects
    Astghik Z. Pepoyan, Elya S. Pepoyan, Lilit Galstyan, Natalya A. Harutyunyan, Vardan V. Tsaturyan, Tamas Torok, Alexey M. Ermakov, Igor V. Popov, Richard Weeks, Michael L. Chikindas
    Probiotics and Antimicrobial Proteins.2021; 13(5): 1306.     CrossRef
  • Deep convolutional neural network: a novel approach for the detection of Aspergillus fungi via stereomicroscopy
    Haozhong Ma, Jinshan Yang, Xiaolu Chen, Xinyu Jiang, Yimin Su, Shanlei Qiao, Guowei Zhong
    Journal of Microbiology.2021; 59(6): 563.     CrossRef
  • Key Technologies for Progressing Discovery of Microbiome-Based Medicines
    Remy B. Young, Vanessa R. Marcelino, Michelle Chonwerawong, Emily L. Gulliver, Samuel C. Forster
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Statistical and Machine Learning Techniques in Human Microbiome Studies: Contemporary Challenges and Solutions
    Isabel Moreno-Indias, Leo Lahti, Miroslava Nedyalkova, Ilze Elbere, Gennady Roshchupkin, Muhamed Adilovic, Onder Aydemir, Burcu Bakir-Gungor, Enrique Carrillo-de Santa Pau, Domenica D’Elia, Mahesh S. Desai, Laurent Falquet, Aycan Gundogdu, Karel Hron, Tho
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • The potential for mitigation of methane emissions in ruminants through the application of metagenomics, metabolomics, and other -OMICS technologies
    Victoria Asselstine, Stephanie Lam, Filippo Miglior, Luiz F Brito, Hannah Sweett, Leluo Guan, Sinead M Waters, Graham Plastow, Angela Cánovas
    Journal of Animal Science.2021;[Epub]     CrossRef
  • Omics-based microbiome analysis in microbial ecology: from sequences to information
    Jang-Cheon Cho
    Journal of Microbiology.2021; 59(3): 229.     CrossRef
  • kernInt: A Kernel Framework for Integrating Supervised and Unsupervised Analyses in Spatio-Temporal Metagenomic Datasets
    Elies Ramon, Lluís Belanche-Muñoz, Francesc Molist, Raquel Quintanilla, Miguel Perez-Enciso, Yuliaxis Ramayo-Caldas
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Integrating Systems and Synthetic Biology to Understand and Engineer Microbiomes
    Patrick A. Leggieri, Yiyi Liu, Madeline Hayes, Bryce Connors, Susanna Seppälä, Michelle A. O'Malley, Ophelia S. Venturelli
    Annual Review of Biomedical Engineering.2021; 23(1): 169.     CrossRef
  • Towards multi-label classification: Next step of machine learning for microbiome research
    Shunyao Wu, Yuzhu Chen, Zhiruo Li, Jian Li, Fengyang Zhao, Xiaoquan Su
    Computational and Structural Biotechnology Journal.2021; 19: 2742.     CrossRef
  • User guides for biologists to learn computational methods
    Dokyun Na
    Journal of Microbiology.2020; 58(3): 173.     CrossRef
  • Catalyzing Holistic Agriculture Innovation Through Industrial Biotechnology
    Larry P. Walker, Douglas Buhler
    Industrial Biotechnology.2020; 16(4): 189.     CrossRef

Journal of Microbiology : Journal of Microbiology
TOP