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UBCG: Up-to-date bacterial core gene set and pipeline for phylogenomic tree reconstruction
Seong-In Na , Yeong Ouk Kim , Seok-Hwan Yoon , Sung-min Ha , Inwoo Baek , Jongsik Chun
J. Microbiol. 2018;56(4):280-285.   Published online February 28, 2018
DOI: https://doi.org/10.1007/s12275-018-8014-6
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AbstractAbstract
Genome-based phylogeny plays a central role in the future taxonomy and phylogenetics of Bacteria and Archaea by replacing 16S rRNA gene phylogeny. The concatenated core gene alignments are frequently used for such a purpose. The bacterial core genes are defined as single-copy, homologous genes that are present in most of the known bacterial species. There have been several studies describing such a gene set, but the number of species considered was rather small. Here we present the up-to-date bacterial core gene set, named UBCG, and software suites to accommodate necessary steps to generate and evaluate phylogenetic trees. The method was successfully used to infer phylogenomic relationship of Escherichia and related taxa and can be used for the set of genomes at any taxonomic ranks of Bacteria. The UBCG pipeline and file viewer are freely available at https://www.ezbiocloud.net/ tools/ubcg and https://www.ezbiocloud.net/tools/ubcg_viewer, respectively.

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  • Xiashengella succiniciproducens gen. nov., sp. nov., a succinate-producing bacterium isolated from an anaerobic digestion tank in the family Marinilabiliaceae of the order Bacteroidales
    Hao-Jie Huang, Xi Zhang, Xin-Wei Sun, Biao Chen, Xiu-Tong Li, Nan Zhou, Rashidin Abdugheni, Qiu-Yin Cheng, Tie-Jun Zhang, Yao Liu, Yong Jiang, Ye Deng, Shuang-Jiang Liu, Cheng-Ying Jiang
    Archives of Microbiology.2024;[Epub]     CrossRef
  • Comparative genome analysis of the genus Marivirga and proposal of two novel marine species: Marivirga arenosa sp. nov., and Marivirga salinae sp. nov.
    Neak Muhammad, Forbes Avila, Song-Gun Kim
    BMC Microbiology.2024;[Epub]     CrossRef
  • Lacticaseibacillus pabuli sp. nov., isolated from fermented cattle feed
    Hyorim Choi, Yiseul Kim, Seunghwan Kim, Soon-Wo Kwon, Daseul Lee, Byeong-Hak Han, Seung-Beom Hong, Hanako Naito, Tomomi Yamada, Moriyuki Hamada, Jun Heo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Resolving the metabolism of monolignols and other lignin-related aromatic compounds in Xanthomonas citri
    Damaris B. Martim, Anna J. V. C. Brilhante, Augusto R. Lima, Douglas A. A. Paixão, Joaquim Martins-Junior, Fernanda M. Kashiwagi, Lucia D. Wolf, Mariany S. Costa, Fabrícia F. Menezes, Rafaela Prata, Matheus C. Gazolla, Juliana A. Aricetti, Gabriela F. Per
    Nature Communications.2024;[Epub]     CrossRef
  • Pedobacter rhodius sp. nov. and Pedobacter punctiformis sp. nov., isolated from soil
    Haejin Woo, Geeta Chhetri, Inhyup Kim, Yoonseop So, Sunho Park, Yonghee Jung, Taegun Seo
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • A comparative genomic study of a hydrocarbon-degrading marine bacterial consortium
    Jorge Rojas-Vargas, Eria A. Rebollar, Alejandro Sanchez-Flores, Liliana Pardo-López, Pankaj Kumar Arora
    PLOS ONE.2024; 19(8): e0303363.     CrossRef
  • Gemmobacter denitrificans sp. nov., a denitrifying bacterium, isolated from pond water for Litopenaeus vannamei
    Mingxia Zhang, Yulian Zhang, Fan Yang, Qing Yao, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Janibacter alittae sp. nov., an actinobacterium isolated from the gut of marine sandworm (Alitta virens)
    Bora Kim, Min Ok Jun, Ah-In Yang, Sung-Hong Joe, Hae-In Joe, Hojun Sung, Ki Hyun Kim, Hyun Jung Kim, Na-Ri Shin
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Sporosarcina jeotgali sp. nov., Sporosarcina oncorhynchi sp. nov., and Sporosarcina trichiuri sp. nov., Isolated from Jeotgal, a Traditional Korean Fermented Seafood
    Ah-In Yang, Bora Kim, Sung-Hong Joe, Hae-In Joe, Hanna Choe, Ki Hyun Kim, Min Ok Jun, Na-Ri Shin
    Journal of Microbiology.2024; 62(4): 285.     CrossRef
  • Characterization of Bacillus velezensis TJS119 and its biocontrol potential against insect pathogens
    Kook-Il Han, Young Ho Nam, Byung Su Hwang, Jeong Tae Kim, Jum Oc Jung, Eunsun Kim, Mi-Hwa Lee
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • Altererythrobacter litoralis sp. nov., a New Carotenoid-Producing Member of the Family Erythrobacteraceae, Isolated from a Tidal Flat Sediment
    Yang Liu, Tao Pei, Juan Du, Mingxia Zhang, Honghui Zhu
    Current Microbiology.2024;[Epub]     CrossRef
  • Pengzhenrongella frigida sp. nov., isolated from a glacier
    Qing Liu, Lei-Lei Yang, Yu-Hua Xin
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Isolation and identification of uric acid-dependent Aciduricibacillus chroicocephali gen. nov., sp. nov. from seagull feces and implications for hyperuricemia treatment
    Wenxuan Liu, Fulong Nan, Fengjun Liu, Xiaoli Yang, Zonghui Li, Shasha Jiang, Xianjuan Zhang, Jun Li, Meng Yu, Yunyang Wang, Bin Wang, Vincent B. Young
    mSphere.2024;[Epub]     CrossRef
  • Ciceribacter sichuanensis sp. nov., a plant growth promoting rhizobacterium isolated from root nodules of soybean in Sichuan, China
    Yanqin Zhang, Yuanxue Chen, Petri Penttinen, Xing Wang, Ying Quan, Licheng Wen, Miao Yang, Xiaoping Zhang, Qiang Chen, Lingzi Zhang, Junjie Zhang, Xiaoxia Zhang, Kaiwei Xu
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Clostridium lapidicellarium sp. nov. and Clostridium moutaii sp. nov., two species isolated from fermentation cellar-producing sauce-flavour Chinese baijiu
    Fan Yang, Hui Wang, Liang-Qiang Chen, Nan Zhou, Jian-Jun Lu, Xiu-Xin Pu, Bo Wan, Li Wang, Shuang-Jiang Liu
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Paracoccus actinidiae sp.nov., a novel bacterium isolated from kiwi tree rhizosphere soil
    Chenqi Xu, Han Peng, He Li, Xinran Xie, Siwei Chen, Junhao Dai, Hong Ren
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • The Type Strain of Bifidobacterium indicum Scardovi and Trovatelli 1969 (Approved Lists 1980) is ATCC 25912, not DSM 20214, and Rejection to Reclassify Bifidobacterium coryneforme as Bifidobacterium indicum
    Cheng-Shan Jiang, Chun Yan Li, Chun Tao Gu
    Current Microbiology.2024;[Epub]     CrossRef
  • Actinomadura monticuli sp. nov., isolated from Darangshi Oreum (a volcanic cone), and the reclassification of Actinomadura glauciflava Lu et al. 2003 as a later heterotypic synonym of Actinomadura luteofluorescens (Shinobu 1962) Preobrazhensk
    Soon Dong Lee, Hong Lim Yang, In Seop Kim
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Streptococcus taoyuanensis sp. nov., a Novel Species Isolated from a Patient with Bacteremia
    Chien-Yu Lee, Chin-Kan Chan, Yi-Sheng Chen, Yun-Shien Lee, Shih-Ting Lin, Yu-Chung Chang, Hui-Chung Wu, Jia-rong Zhang, Hong-yu Chen, Li-Ting Wang
    Current Microbiology.2024;[Epub]     CrossRef
  • Difference in gut microbial dysbiotic patterns between body-first and brain-first Parkinson's disease
    Don Gueu Park, Woorim Kang, In-Ja Shin, Mauricio Chalita, Hyun-Seok Oh, Dong-Wook Hyun, Hyun Kim, Jongsik Chun, Young-Sil An, Eun Jeong Lee, Jung Han Yoon
    Neurobiology of Disease.2024; 201: 106655.     CrossRef
  • Acidithiobacillus acidisediminis sp. nov., an acidophilic sulphur-oxidizing chemolithotroph isolated from acid mine drainage sediment
    Xiu-Tong Li, Zong-Lin Liang, Ye Huang, Zhen Jiang, Zhen-Ni Yang, Nan Zhou, Ying Liu, Shuang-Jiang Liu, Cheng-Ying Jiang
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Sphingomonas Immobilis sp. nov., and Sphingomonas natans sp. nov. bacteria isolated from soil
    Inyoung Choi, Sathiyaraj Srinivasan, Myung Kyum Kim
    Archives of Microbiology.2024;[Epub]     CrossRef
  • Roseateles agri sp. nov., a New Species Isolated from Fresh Soil in Uiwang, South Korea
    Yelim You, Jaisoo Kim
    Diversity.2024; 16(5): 279.     CrossRef
  • Description of Roseibium sediminicola sp. nov. Isolated from Sediment of a Tidal Flat on the Yellow Sea Coast
    Soyeon Ahn, Veeraya Weerawongwiwat, Yunjeong Lee, David Hyung-Sun Choi, Jong-Hwa Kim, Jung-Hoon Yoon, Jung-Sook Lee, Ampaitip Sukhoom, Wonyong Kim
    Current Microbiology.2024;[Epub]     CrossRef
  • Chemolithoautotrophic diazotrophs dominate dark nitrogen fixation in mangrove sediments
    Shasha Wang, Lijing Jiang, Zhuoming Zhao, Zhen Chen, Jun Wang, Karine Alain, Liang Cui, Yangsheng Zhong, Yongyi Peng, Qiliang Lai, Xiyang Dong, Zongze Shao
    The ISME Journal.2024;[Epub]     CrossRef
  • Fontisubflavum oceani gen. nov., sp. nov., isolated from the deep-sea cold seep water of South China Sea
    Xiu-dan Xu, Dan-dan Zhou, Bin-zhe Zhang, Jian Zhang
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Paenibacillus glufosinatiresistens sp. nov., a glufosinate-resistant bacterium isolated from sludge
    Yan Wu, Yuwen Yang, Minglai Wan, Le Chen, Ye Yuan, Jian He, Baolong Zhang
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Erythrobacter oryzae sp. nov., isolated from rice paddy soil
    Hyo-Jin Lee, Ji-Soo Hwang, Eun-kyung Lee, Kyung-Sook Whang
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • SeqCode facilitates naming of South African rhizobia left in limbo
    Melandré van Lill, Stephanus N. Venter, Esther K. Muema, Marike Palmer, Wai Y. Chan, Chrizelle W. Beukes, Emma T. Steenkamp
    Systematic and Applied Microbiology.2024; 47(2-3): 126504.     CrossRef
  • A Novel Strain Burkholderia theae GS2Y Exhibits Strong Biocontrol Potential Against Fungal Diseases in Tea Plants (Camellia sinensis)
    Yijie Dong, Xing Wang, Guang-Da Feng, Qing Yao, Honghui Zhu
    Cells.2024; 13(21): 1768.     CrossRef
  • Clostridium omnivorum sp. nov., isolated from anoxic soil under the treatment of reductive soil disinfestation
    Atsuko Ueki, Akio Tonouchi, Nobuo Kaku, Sachi Honma, Katsuji Ueki
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Alkalimonas mucilaginosa sp. nov. and Alkalimonas cellulosilytica sp. nov. isolated from alkaline Lonar lake, India
    Sonia Thite, Devika Godbole, Mahima Debnath, Agrima Bhatt, Amit Yadav, Tushar Lodha, Neetha Joseph, Kiran Kirdat, Dibyajyoti Boruah, Roohani Sharma, Amaraja Joshi
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Genome-based taxonomic classification of the genus Sulfitobacter along with the proposal of a new genus Parasulfitobacter gen. nov. and exploring the gene clusters associated with sulfur oxidation
    Xiaokun Xu, Mengdan He, Qingjie Xue, Xiuzhen Li, Ang Liu
    BMC Genomics.2024;[Epub]     CrossRef
  • Aurantiacibacter flavus sp. nov. and Aurantiacibacter gilvus sp. nov., isolated from the mudflat of Suaeda japonica colonies
    Sunho Park, Inhyup Kim, Haejin Woo, Hyunji Lee, Subin Yook, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Ochrobactrum chromiisoli sp. nov., Isolated from Chromium-Contaminated Soil
    Yi Yang, Zhe Xu, Li Yang, Meng-yao Hu, Guang-yang Jiang, Jia Chen, Yi-chen Yang, Yongqiang Tian
    Current Microbiology.2024;[Epub]     CrossRef
  • Thiosulfate oxidation and autotrophy potential by marine prevalent heterotrophic bacteria of genus Marinobacter
    Fei Xu, Xiang Zeng, Yadong Gong, Zongze Shao
    Acta Oceanologica Sinica.2024; 43(8): 89.     CrossRef
  • Lacticaseibacillus parahuelsenbergensis sp. nov., Lacticaseibacillus styriensis sp. nov. and Lacticaseibacillus zeae subsp. silagei subsp. nov., isolated from different grass and corn silage
    Monika Grabner F., Monika Grabner H., Hermine Schein, Andrea Schrank, Manuela Töglhofer, Elisabeth Weidenholzer, Christian Rückert-Reed, Tobias Busche, Marlene Buchebner-Jance
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Draft genome sequence of 'Candidatus Phytoplasma asteris,’ strain SW86 associated with sandal spike disease (SSD)
    Kiran Kirdat, Bhavesh Tiwarekar, K. N. Manjula, S. Padma, Shivaji Sathe, R. Sundararaj, Amit Yadav
    3 Biotech.2024;[Epub]     CrossRef
  • Cold-adapted Exiguobacterium sibiricum K1 as a potential bioinoculant in cold regions: Physiological and genomic elucidation of biocontrol and plant growth promotion
    Sareeka Kumari, Anil Kumar, Ayush Lepcha, Rakshak Kumar
    Gene.2024; 916: 148439.     CrossRef
  • EcoGenoRisk: Developing a computational ecological risk assessment tool for synthetic biology
    Anna Ulanova, Cresten Mansfeldt
    Environmental Pollution.2024; 346: 123647.     CrossRef
  • Description of Aliirhizobium terrae sp. nov., A Plant Growth-Promoting Bacterium Isolated from a Maize-Rice Rotation Agriculture Field
    Shih-Yao Lin, Tzu-Yu Lin, Asif Hameed, Chia-Fang Tsai, Chiu-Chung Young
    Current Microbiology.2024;[Epub]     CrossRef
  • Novel oceanic cyanobacterium isolated from Bangaram island with profound acid neutralizing ability is proposed as Leptolyngbya iicbica sp. nov. strain LK
    Subhajeet Dutta, Shreya Kothari, Deeksha Singh, Samrat Ghosh, Aditya Narayan Sarangi, Smruti Sanjita Behera, Satish Prajapati, Prasanta Kumar Sinha, Asharani Prusty, Sucheta Tripathy
    Molecular Phylogenetics and Evolution.2024; 197: 108092.     CrossRef
  • Sulfide Toxicity as Key Control on Anaerobic Oxidation of Methane in Eutrophic Coastal Sediments
    Paula Dalcin Martins, João P. R. C. de Monlevad, Maider J. Echeveste Medrano, Wytze Klaas Lenstra, Anna Julia Wallenius, Martijn Hermans, Caroline P. Slomp, Cornelia Ulrike Welte, Mike S. M. Jetten, Niels A. G. M. van Helmond
    Environmental Science & Technology.2024; 58(26): 11421.     CrossRef
  • Phylogeny and genomic analysis of Shewanella cutis sp. nov., isolated from freshwater pufferfish
    Lipika Das, Ritu Rani Archana Kujur, Tanmoy Debnath, Subrata K. Das
    Folia Microbiologica.2024; 69(4): 723.     CrossRef
  • Aequorivita flava sp. nov., isolated from deep-sea sediments
    Xiangwei Chen, Jinmei Xia, Xiaoteng Fu, Qiliang Lai, Jianning Wang, Yaping Du, Xiupian Liu, Guangyu Li, Xixiang Tang, Zongze Shao
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Paraflavitalea pollutisoli sp. nov., Pollutibacter soli gen. nov. sp. nov., Polluticoccus soli gen. nov. sp. nov., and Terrimonas pollutisoli sp. nov., four new members of the family Chitinophagaceae from polluted soil
    Ze-Shen Liu, Xiao-Kang Wang, Ke-Huan Wang, Mei-Ling Yang, De-Feng Li, Shuang-Jiang Liu
    Systematic and Applied Microbiology.2024; 47(2-3): 126503.     CrossRef
  • Sinomonas terricola sp. nov., a plant-beneficial bacterium isolated from litchi rhizosphere soil in Guangdong, China
    Jiaxin Wan, Yang Zhou, Hui Sun, Huaping Li, Qing Yao, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Genetic and phenotypic diversity of Flavobacterium psychrophilum isolates from Czech salmonid fish farms
    Vera Vaibarova, Stanislava Kralova, Miroslava Palikova, Jana Schwarzerova, Julie Nejezchlebova, Darina Cejkova, Alois Cizek
    BMC Microbiology.2024;[Epub]     CrossRef
  • Citrobacter enshiensis sp. nov., isolated from seleniferous soil
    Sasa Zhang, Kui Li, Jing Peng, Haoyang Wang, Jiayin Sun, Yanbin Guo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Distinct genome trichotomy in members of Hapalosiphonaceae is guided by habitat adaptation with Mastigocladus laminosus UU774 as a case study
    Aribam Geeta, Mayuri Mukherjee, Bornita Das, Subhajeet Dutta, Asharani Prusty, Samrat Ghosh, Anashuya Biswas Raha, Mousumi Poddar Sarkar, Sucheta Tripathy
    Algal Research.2024; 82: 103603.     CrossRef
  • Microbacterium aquilitoris sp. nov. and Microbacterium gwkjiense sp. nov., isolated from beach
    Soon Dong Lee, Hong Lim Yang, Ji-Sun Kim, In Seop Kim
    Archives of Microbiology.2024;[Epub]     CrossRef
  • Microvirga sesbaniae sp. nov. and Microvirga yunnanensis sp. nov., Pink-Pigmented Bacteria Isolated from Root Nodules of Sesbania cannabina (Retz.) Poir.
    Nan Shi, Teng He, Huifang Qin, Ziye Wang, Shenghao You, Entao Wang, Guoli Hu, Fang Wang, Miao Yu, Xiaoyun Liu, Zhenyu Liu
    Microorganisms.2024; 12(8): 1558.     CrossRef
  • Microbacterium horticulturae sp. nov., a novel actinobacterium isolated from flowerpot soil
    Hyorim Choi, Yunhee Choi, Seunghwan Kim, Yiseul Kim, Hanako Naito, Tomomi Yamada, Moriyuki Hamada, NamJung Kim, Yonghoon Lee, Jun Heo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Comparative genomics of the genus Halioglobus reveals the genetic basis for the reclassification of Halioglobus pacificus as Parahalioglobus pacificus gen. nov. comb. nov
    Jake Adolf V. Montecillo
    International Microbiology.2024; 27(6): 1831.     CrossRef
  • Paraburkholderia largidicola sp. nov., a gut symbiont of the bordered plant bug Physopelta gutta
    Reona Yashima, Yuan Terata, Kaoru Sakamoto, Miho Watanabe, Kazutaka Takeshita
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Sphingomonas longa sp. nov., Sphingomonas mollis sp. nov. and Sphingomonas aurea sp. nov.: three novel Sphingomonas species isolated from soil
    Eo Jin Kim, Soo Hyun Maeng, Myung Kyum Kim
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Genomics of the Thermophilic Bacterium Thermosulfidibacter takaii Reveals Novel Lineage of Deep-Branching Bacterial Phylum
    Jake Adolf V. Montecillo
    Indian Journal of Microbiology.2024; 64(2): 762.     CrossRef
  • Hyalangiumruber sp. nov, characterization of a novel myxobacterium strain s54d21 and their secondary metabolites
    Yi Zang, Xianjiao Zhang, Zhe Wang, Qingyi Tong, Yang Zhou, Qing Yao, Honghui Zhu
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • Achromobacter seleniivolatilans sp. nov. and Buttiauxella selenatireducens sp. nov., isolated from the rhizosphere of selenium hyperaccumulator Cardamine hupingshanesis
    Sasa Zhang, Yi Liu, Hao Wang, Zhongnan Xu, Jing Peng, Qiaolin Xu, Kui Li, Haoyang Wang, Yanbin Guo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Draft Genome Sequence Analyses of Two Novel Marinobacter suadae sp. nov. and Wenyingzhuangia gilva sp. nov. Isolated from the Root of Suaeda japonica Makino
    Sunho Park, Inhyup Kim, Geeta Chhetri, Yonghee Jung, Haejin Woo, Taegun Seo
    Life.2024; 14(3): 296.     CrossRef
  • Unveiling three novel actinobacterial species (Streptomyces cavernicola sp. nov., Streptomyces solicavernae sp. nov. and Streptomyces luteolus sp. nov.) in soil samples in Phu Pha Phet Cave, Thailand
    Nitcha Chamroensaksri, Supattra Muangham, Chanwit Suriyachadkun, Worawich Phornsiricharoenphant, Wongsakorn Phongsopitanun, Satinee Suetrong, Somboon Tanasupawat
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Cellulomonas alba sp. nov. and Cellulomonas edaphi sp. nov., isolated from wetland soils
    Sunho Park, Inhyup Kim, Geeta Chhetri, Yonghee Jung, Haejin Woo, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Microbacterium algihabitans sp. nov., Microbacterium phycohabitans sp. nov., and Microbacterium galbum sp. nov., isolated from dried beach seaweeds
    Soon Dong Lee, Hong Lim Yang, In Seop Kim
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Bifidobacterium apicola sp. nov., isolated from the gut of honeybee (Apis mellifera)
    Ting-Yu Wang, Hao Wang, Chun Tao Gu
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Polaribacter ponticola sp. nov., isolated from seawater, reclassification of Polaribacter undariae as a later heterotypic synonym of Polaribacter sejongensis, and emended description of Polaribacter sejongensis Kim et al. 2013
    Ju Hye Baek, Mahrukh Butt, Dong Min Han, Jeong Min Kim, Seohui Choi, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Description of Mycolicibacterium arenosum sp. nov. Isolated from Coastal Sand on the Yellow Sea Coast
    Jiseon Jeong, Soyeon Ahn, Thoi Cong Truong, Jong-Hwa Kim, Veeraya Weerawongwiwat, Jung-Sook Lee, Jung-Hoon Yoon, Ampaitip Sukhoom, Wonyong Kim
    Current Microbiology.2024;[Epub]     CrossRef
  • Genome analysis deciphered Chryseobacterium indicum is a distinct species associated with freshwater pufferfish
    Manish Prakash Victor, Ritu Rani Archana Kujur, Lipika Das, Subrata K. Das
    Infection, Genetics and Evolution.2024; 118: 105561.     CrossRef
  • Stable-isotope probing combined with amplicon sequencing and metagenomics identifies key bacterial benzene degraders under microaerobic conditions
    András Táncsics, Anna Bedics, Sinchan Banerjee, André Soares, Erzsébet Baka, Alexander J. Probst, Balázs Kriszt
    Biologia Futura.2024; 75(3): 301.     CrossRef
  • Streptococcus taonis sp. nov., a novel bacterial species isolated from a blood culture of a patient
    Chien-Yu Lee, Chin-Kan Chan, Momoko Chida, Mika Miyashita, Yun-Shien Lee, Hui-Chung Wu, Yu-Chung Chang, Wen-Ting Lin, Yi-Sheng Chen
    Archives of Microbiology.2024;[Epub]     CrossRef
  • Shewanella phaeophyticola sp. nov. and Vibrio algarum sp. nov., isolated from marine brown algae
    Mahrukh Butt, Jaejoon Jung, Jeong Min Kim, Hülya Bayburt, Dong Min Han, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Two Novel Bacterial Species, Rhodanobacter lycopersici sp. nov. and Rhodanobacter geophilus sp. nov., Isolated from the Rhizosphere of Solanum lycopersicum with Plant Growth-Promoting Traits
    Haejin Woo, Inhyup Kim, Geeta Chhetri, Sunho Park, Hyunji Lee, Subin Yook, Taegun Seo
    Microorganisms.2024; 12(11): 2227.     CrossRef
  • Roseateles caseinilyticus sp. nov. and Roseateles cellulosilyticus sp. nov., isolated from rice paddy field soil
    Yoonseop So, Geeta Chhetri, Inhyup Kim, Sunho Park, Yonghee Jung, Taegun Seo
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • A Multilocus Sequence Typing Scheme for Rapid Identification of Xanthomonas citri Based on Whole-Genome Sequencing Data
    Efenaide B. Okoh, Michael Payne, Ruiting Lan, Markus Riegler, Toni A. Chapman, Daniel R. Bogema
    Phytopathology®.2024; 114(7): 1480.     CrossRef
  • Taxonomic characterization of Sphaerotilus microaerophilus sp. nov., a sheath-forming microaerophilic bacterium of activated sludge origin
    Shiori Narihara, Shun Chida, Naoki Matsunaga, Ryosuke Akimoto, Mizuki Akimoto, Aoi Hagio, Tomomi Mori, Tadashi Nittami, Michio Sato, Sehui Mun, Hyeonjin Kang, Ji Hwan Back, Minoru Takeda
    Archives of Microbiology.2024;[Epub]     CrossRef
  • Dietary quality and the gut microbiome in early-stage Parkinson’s disease patients
    Hyun Jeong Yoon, Woorim Kang, Sungyang Jo, Yun Su Hwang, Je Hee Lee, Sun Ju Chung, Yoo Kyoung Park
    Nutritional Neuroscience.2024; 27(7): 761.     CrossRef
  • Shewanella youngdeokensis sp. nov. Isolated from Marine Sediment and Sea Water of East Sea in Republic of Korea
    Y.-S. Lee, H.-R. Jeong, E.-J. Hwang, M. P. Patil, S. S. Choi, Y. B. Seo, G.-D. Kim
    Microbiology.2024; 93(6): 737.     CrossRef
  • Methylomonas rivi sp. nov., Methylomonas rosea sp. nov., Methylomonas aurea sp. nov. and Methylomonas subterranea sp. nov., type I methane-oxidizing bacteria isolated from a freshwater creek and the deep terrestrial subsurface
    Christopher A. Abin, Christopher T. Garner, Krithivasan Sankaranarayanan, Reid A. Sindelar, Kyrah F. Kotary, Rosa M. Garner, Samantha C. Barclay, Haiyuan Cai, Paul A. Lawson, Lee R. Krumholz
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Lysobacter stagni sp. nov. and Limnohabitans lacus sp. nov., isolated from a pond
    Yonghee Jung, Geeta Chhetri, Inhyup Kim, Yoonseop So, Sunho Park, Haejin Woo, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • EzBioCloud: a genome-driven database and platform for microbiome identification and discovery
    Mauricio Chalita, Yeong Ouk Kim, Sein Park, Hyun-Seok Oh, Jae Hyoung Cho, Jeongsup Moon, Nuga Baek, Changsik Moon, Kihyun Lee, Junwon Yang, Gi Gyun Nam, Yeonjae Jung, Seong-In Na, Michael James Bailey, Jongsik Chun
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Description and genomic characterization of Cohnella caldifontis sp. nov., isolated from hot springs in Yunnan province, south-west China
    Ming-Xian Xiang, Cui-Ping Miao, Dian-Yan Zhang, Juan Wang, Yi-Qing Li, Min Yin, ShuKun Tang
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Chitiniphilus purpureus sp. nov., a novel chitin-degrading bacterium isolated from crawfish pond sediment
    Kaiyang Li, Xiong Luo, Rongrong Fan, Zhuoran Ding, Shixue Zheng, Zhengjun Chen
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  • Description of Fuscovulum ytuae sp. nov, a facultative autotroph isolated from the intertidalite of Yangma island, China
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  • Roseateles subflavus sp. nov. and Roseateles aquae sp. nov., isolated from artificial pond water and Roseateles violae sp. nov., isolated from a Viola mandshurica root
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    Jinjun Yue, Fu Yang, Youtie Xiao, Seqiao Lin, Zhengping He, Siyu Wang, Jiayi Zhao, Jinling Yuan, Lubin Li, Lei Liu
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  • Genome-Based Classification of Pedobacter albus sp. nov. and Pedobacter flavus sp. nov. Isolated from Soil
    Nhan Le Thi Tuyet, Jaisoo Kim
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    Seunghwan Kim, Jun Heo, Hyorim Choi, Daseul Lee, Soon-Wo Kwon, Yiseul Kim
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    Weidong Mu, Haoran Liu, Bai Guo, Kaiyue Wang, Jinhua Hu, Jianjun Song, Xiuyun Li, Shuzhen Wei, Aijv Liu, Hongliang Liu
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    Xing Chen, Yuan-Dong Li, Xiu-Ming Liu, Li Gao, Xing-Kui Zhou, Li-Min Dong, Gang Du, Neeli Habib, Wen-Jun Li, Yan-Qing Duan
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  • Flavobacterium capsici sp. nov., isolated from the rhizospheric soils of bell pepper (Capsicum annuum L.)
    Dong Hyun Cho, Yuxin Peng, Zalfa Humaira, Yu Lim Park, Hyun Jung Kim, Rae-Dong Jeong, Cha Young Kim, Jiyoung Lee
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  • Blastococcus montanus sp. nov., a multi-stress-resistant and bacteriostatic-producing bacterium isolated from the Flaming Mountain, Xinjiang,China
    Kexin Wang, Yang Liu, Xiaowen Cui, Tuo Chen, Guangxiu Liu, Wei Zhang, Zhiyong Han, Gaosen Zhang
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    Pravin Kumar, Ashish Verma, Pooja Yadav, Joyasree Das, Lalit Kumar, Srinivasan Krishnamurthi
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    Jianyang Li, Shizheng Xiang, Yufei Li, Ruolin Cheng, Qiliang Lai, Liping Wang, Guizhen Li, Chunming Dong, Zongze Shao, Thomas J. Sharpton
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  • Methylocystis suflitae sp. nov., a novel type II methanotrophic bacterium isolated from landfill cover soil
    Christopher T. Garner, Krithivasan Sankaranarayanan, Christopher A. Abin, Rosa M. Garner, Haiyuan Cai, Paul A. Lawson, Lee R. Krumholz
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  • Polysaccharide degradation in Cellvibrionaceae: Genomic insights of the novel chitin-degrading marine bacterium, strain KSP-S5-2, and its chitinolytic activity
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  • Nitrogen source influences the interactions of comammox bacteria with aerobic nitrifiers
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  • Pseudoalteromonas simplex sp. nov. Isolated from the Skin of Bandtail Puffer Fish (Sphoeroides spengleri)
    Hannah K. Mattsson, Mayanne A. M. de Freitas, Gustavo P. R. de Azevedo, Vinicius Salazar, Verônica V. Vieira, Diogo A. Tschoeke, Cristiane C. Thompson, Fabiano L. Thompson
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  • Roseobacter fucihabitans sp. nov., isolated from the brown alga Fucus spiralis
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  • Massilia agrisoli sp. nov., isolated from rhizospheric soil of banana
    Md. Amdadul Huq, Juncai Ma, Sathiyaraj Srinivasan, Md. Anowar Khasru Parvez, M. Mizanur Rahman, Masoumeh Naserkheil, Md. Abuhena, Pulak Maitra, Fahadul Islam, Kihong NAM, Jong-Hyun Park, Shahina Akter
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  • Tamlana laminarinivorans sp. nov. and Tamlana sargassicola sp. nov., two novel species isolated from Sargassum, show genomic and physiological adaptations for a Sargassum-associated lifestyle
    Jin Li, Yumei Liang, Zhixiao He, Lu An, Yongjin Liu, Mingqi Zhong, Zhong Hu
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  • Ecophysiological and Genomic Characterization of the Freshwater Complete Ammonia OxidizerNitrospirasp. Strain BO4
    Sabita Ghimire-Kafle, Matt E. Weaver, Annette Bollmann, Jennifer B. Glass
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  • Bacteroides faecium sp. nov. isolated from human faeces
    Juseok Kim, Hye Seon Song, Joon Yong Kim, Tae Woong Whon, Won-Hyong Chung, Young-Do Nam, Yoon-E Choi, Seong Woon Roh
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    Jana Schwarzerova, Anastasiya Labanava, Ivan Rychlik, Margaret Varga, Darina Cejkova
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    Yifan Sun, Likun Wang, Dexing Han, Jianjie Li, Yuejiao Liu, Yafang Tan, Zhiyuan Pan, Ruifu Yang, Pinghua Qu, Ziping Wang, Yujing Bi
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    Mitsuo Sakamoto, Naomi Sakurai, Hiroki Tanno, Takao Iino, Moriya Ohkuma, Akihito Endo
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  • Trichlorobacter ammonificans, a dedicated acetate-dependent ammonifier with a novel module for dissimilatory nitrate reduction to ammonia
    Dimitry Y Sorokin, Tamara V Tikhonova, Hanna Koch, Eveline M van den Berg, Renske S Hinderks, Martin Pabst, Natalia I Dergousova, Anastasia Y Soloveva, Gijs J Kuenen, Vladimir O Popov, Mark C M van Loosdrecht, Sebastian Lücker
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  • Limobrevibacterium gyesilva gen. nov., sp. nov., Isolated from Forest Soil
    Nhan Le Thi Tuyet, Jaisoo Kim
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  • Microbacterium tenebrionis sp. nov. and Microbacterium allomyrinae sp. nov., isolated from larvae of Tenebrio molitor L. and Allomyrina dichotoma, respectively
    Soon Dong Lee, In Seop Kim
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  • Roseateles albus sp. nov., Roseateles koreensis sp. nov. and Janthinobacterium fluminis sp. nov., isolated from freshwater at Jucheon River, and emended description of Roseateles aquaticus comb. nov.
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  • Taxonomic Study of Three Novel Paenibacillus Species with Cold-Adapted Plant Growth-Promoting Capacities Isolated from Root of Larix gmelinii
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    Microorganisms.2023; 11(1): 130.     CrossRef
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    Microorganisms.2023; 11(8): 1900.     CrossRef
  • Cyclitol metabolism is a central feature of Burkholderia leaf symbionts
    Bram Danneels, Monique Blignaut, Guillaume Marti, Simon Sieber, Peter Vandamme, Marion Meyer, Aurélien Carlier
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  • Sphingomonas abietis sp. nov., an Endophytic Bacterium Isolated from Korean Fir
    Lingmin Jiang, Hanna Choe, Yuxin Peng, Doeun Jeon, Donghyun Cho, Yue Jiang, Ju Huck Lee, Cha Young Kim, Jiyoung Lee
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  • Description of Brachybacterium sillae sp. nov., a thermophilic bacterium isolated from a hot spring
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  • Bacillus velezensis RC116 Inhibits the Pathogens of Bacterial Wilt and Fusarium Wilt in Tomato with Multiple Biocontrol Traits
    Honghong Dong, Ruixiang Gao, Yijie Dong, Qing Yao, Honghui Zhu
    International Journal of Molecular Sciences.2023; 24(10): 8527.     CrossRef
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  • Asticcacaulis aquaticus sp. nov., Asticcacaulis currens sp. nov. and Asticcacaulis machinosus sp. nov., isolated from streams in PR China
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  • Maritalea mediterranea sp. nov., isolated from marine plastic residues
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  • Acidaminococcus homini s sp. nov., Amedibacillus hominis sp. nov., Lientehia hominis gen. nov. sp. nov., Merdimmobilis hominis gen. nov. sp. nov., and Paraeggerthella hominis sp. nov., isolated from human faeces
    Rashidin Abdugheni, Dan-Hua Li, Yu-Jing Wang, Meng-Xuan Du, Nan Zhou, Chang Liu, Shuang-Jiang Liu
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  • Streptomyces albidoflavus Q antifungal metabolites inhibit the ergosterol biosynthesis pathway and yeast growth in fluconazole-resistant Candida glabrata : phylogenomic and metabolomic analyses
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  • Neopusillimonas aromaticivorans sp. nov. isolated from poultry manure
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  • Salipiger pentaromativorans sp. nov., a polycyclic aromatic hydrocarbon-degrading bacterium isolated from mangrove sediment
    Jiangwei Li, Qiliang Lai, Anyi Hu, Huijie Liu, Dan Qin, Xiaoyong Yang, Yun Tian, Chang-Ping Yu
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    HyungWoo Jo, Chaeyun Baek, Young Mok Heo, Hye-Been Kim, Haeun Lee, Seunghyun Kang, Seyoung Mun, Yunseok Oh, Doyeong Ko, Kyudong Han, Raúl Riesco, Martha E. Trujillo, Dong-Geol Lee
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  • Cerina litoralis gen. nov., sp. nov., a novel potential polysaccharide degrading bacterium of the family Flavobacteriaceae, isolated from marine sediment
    Ya-Wei Wang, Xin-Hui Wang, Jing Zhang, Zong-Jun Du, Da-Shuai Mu
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  • Sphingomonas liriopis sp. nov., Sphingomonas donggukensis sp. nov., and Sphingomonas tagetis sp. nov., isolated from Liriope platyphylla fruit, soil, and Tagetes patula roots
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  • Thiorhodovibrio frisius and Trv. litoralis spp. nov., Two Novel Members from a Clade of Fastidious Purple Sulfur Bacteria That Exhibit Unique Red-Shifted Light-Harvesting Capabilities
    Anika Methner, Steven Kuzyk, Jörn Petersen, Sabine Bauer, Henner Brinkmann, Katja Sichau, Gerhard Wanner, Jacqueline Wolf, Meina Neumann-Schaal, Petra Henke, Marcus Tank, Cathrin Spröer, Boyke Bunk, Jörg Overmann
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  • Genomic attributes and characterization of novel exopolysaccharide-producing bacterium Halomonas piscis sp. nov. isolated from jeotgal
    Bora Kim, Ah-In Yang, Hae-In Joe, Ki Hyun Kim, Hanna Choe, Sung-Hong Joe, Min Ok Jun, Na-Ri Shin
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  • Corynebacterium lipophilum sp. nov., a lipophilic bacterium isolated from clinical breast specimens and emended description of the species Corynebacterium pilbarense
    Qiang Luo, Haimin Luo, Tianqi Zhang, Xiaofang Liu, Xiaowei Chen, Qianming Chen, Junhui Feng, Pinghua Qu, Cha Chen, Ning Xu
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  • Arcobacter roscoffensis sp. nov., a marine bacterium isolated from coastal seawater
    Javier Pascual, Cendrella Lepleux, Anika Methner, Cathrin Spröer, Boyke Bunk, Jörg Overmann
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  • Ferranicluibacter rubi gen. nov., sp. nov., a new member of family Rhizobiaceae isolated from stems of elmleaf blackberry (Rubus ulmifolius Schott) in Northwest Spain
    Rocio Roca-Couso, Jose David Flores-Felix, Jose M. Igual, Paula García-Fraile, Encarna Velázquez, Raúl Rivas
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  • Sulfurovum mangrovi sp. nov., an obligately chemolithoautotrophic, hydrogen-oxidizing bacterium isolated from coastal marine sediments
    Yufei Li, Shasha Wang, Bowen Ji, Qing Yuan, Shiping Wei, Qiliang Lai, Kaiyue Wu, Lijing Jiang, Zongze Shao
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  • Hominibacterium faecale gen. nov., sp. nov., an anaerobic l-arginine-degrading bacterium isolated from human feces
    Noori Borhanudin, Min Yang, Andrei V. Chaplin, Jiang Li, Qiong Wang, Li-rong Dai, Ke-jia Wu, Shi-chun Ma, Boris A. Efimov, Lei Cheng
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    Guang-Da Feng, Jiali Li, Songzhen Yang, Jun Zhang, Honghui Zhu
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  • Vibrio intestinalis sp. nov., isolated from intestine of seahorse
    Libo Yu, Shiping Wei, Zhidong Zhou, Zongze Shao
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    Ngoc Hoang Trinh, Jaisoo Kim
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  • Reclassification of Clostridium cocleatum, Clostridium ramosum, Clostridium spiroforme and Clostridium saccharogumia as Thomasclavelia cocleata gen. nov., comb. nov., Thomasclavelia ramosa comb. nov., gen. nov., Thomasclavelia spiroformis comb. nov. and T
    Paul A. Lawson, Liz Saavedra Perez, Krithivasan Sankaranarayanan
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Paracoccus albicereus sp. nov., isolated from the shallow-sea hydrothermal system off Kueishantao Island
    Yajie He, Dan Lin, Beihan Chen, Xinzhu Liu, Jianing Ye, Jia Sun, Kai Tang
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Flectobacillus longus sp. nov. and Flectobacillus rivi sp. nov., isolated from streams in China and reclassification of Flectobacillus rhizosphaerae as a synonym of Flectobacillus roseus
    Huibin Lu, Ping Li, Li Chen, Guangjie Chen
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Aequorivita vitellina sp. nov. and Aequorivita xiaoshiensis sp. nov., isolated from marine sediment
    Ya-Wei Wang, Jing Zhang, Shu-Xin Wang, Zong-Jun Du, Da-Shuai Mu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Two novel symbiovars of Bradyrhizobium yuanmingense, americaense and caribense, the symbiovar tropici of Bradyrhizobium pachyrhizi and the symbiovar cajani of Bradyrhizobium cajani are microsymbionts of the legume Cajanus cajan in Dominican Republic
    José David Flores-Félix, Fernando Sánchez-Juanes, Juan Araujo, César Antonio Díaz-Alcántara, Encarna Velázquez, Fernando González-Andrés
    Systematic and Applied Microbiology.2023; 46(5): 126454.     CrossRef
  • Frateuria soli sp. nov. and Frateuria edaphi sp. nov., isolated from greenhouse soil
    Miyoung Won, Jun Heo, Hang-Yeon Weon, Daseul Lee, Byeong-Hak Han, Seung-Beom Hong, Soon-Wo Kwon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Four new Microbacterium species isolated from seaweeds and reclassification of five Microbacterium species with a proposal of Paramicrobacterium gen. nov. under a genome-based framework of the genus Microbacterium
    Soon Dong Lee, Hong Lim Yang, In Seop Kim
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Actinomadura terrae sp. nov. and Actinomadura litoris OS3-89, isolated from rhizosphere soil of cactus
    Soon Dong Lee, Hong Lim Yang, In Seop Kim, Hanna Choe, Ji-Sun Kim
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Bioplastic (poly-3-hydroxybutyrate)-producing Massilia endophytica sp. nov., isolated from Cannabis sativa L. ‘Cheungsam’
    Doeun Jeon, Lingmin Jiang, Ki-Hyun Kim, Yuxin Peng, Donghyun Cho, Rae-Dong Jeong, Cha Young Kim, Jae Cheol Jeong, Jiyoung Lee
    Scientific Reports.2023;[Epub]     CrossRef
  • Similar but different: Characterization of dddD gene–mediated DMSP metabolism among coral-associated Endozoicomonas
    Yu-Jing Chiou, Ya-Fan Chan, Sheng-Ping Yu, Chih-Ying Lu, Silver Sung-Yun Hsiao, Pei-Wen Chiang, Ting-Chang Hsu, Po-Yu Liu, Naohisa Wada, Yu Lee, Wann-Neng Jane, Der-Chuen Lee, Yu-Wen Huang, Sen-Lin Tang
    Science Advances.2023;[Epub]     CrossRef
  • Halomonas dongshanensis sp. nov., isolated from the seawater of Dongshan Island
    Wen-zhen Lin, Lin-feng Gong, Ying Guo, Ru-zhen Liu, Wei Xu, Qi-yang Guan, Chi-ming Guo, Zhi-kai Lin, Hong-yan Meng, Xiao-yao Chen
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Reclassification of Sabulilitoribacter multivorans and Sabulilitoribacter arenilitoris as Flaviramulus multivorans comb. nov. and Wocania arenilitoris comb. nov., respectively, based on genome sequence analysis
    Ang Liu, Xinyue Dong, Wanting Wang, Jiayi Qin, Hongyu Leng, Chenlong Yan, Longyu Zhao
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Tahibacter harae sp. nov., isolated from pig farm soil in Guangdong, PR China
    Haixin Chen, Yang Zhou, Qing Yao, Hongxia Jiang, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Paenibacillus soyae sp. nov., isolated from the rhizosphere of soya bean
    Hui Zhao, Yue Su, Qihui Gu, Jumei Zhang, Xinqiang Xie, Qingping Wu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Maribacter aquimaris sp. nov., isolated from seawater adjacent to Fildes Peninsula, Antarctica
    Yanfeng Zhang, Yanwu Zhai, Lulu Mu, Miaomiao Hu, Wei Fang, Yazhong Xiao, Zemin Fang
    Antonie van Leeuwenhoek.2023; 116(8): 753.     CrossRef
  • Three novel marine species of the genus Reichenbachiella exhibiting degradation of complex polysaccharides
    Neak Muhammad, Forbes Avila, Olga I. Nedashkovskaya, Song-Gun Kim
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Isolation of Spirosoma foliorum sp. nov. from the fallen leaf of Acer palmatum by a novel cultivation technique
    Ho Le Han, Dian Alfian Nurcahyanto, Neak Muhammad, Yong-Jae Lee, Tra T. H. Nguyen, Song-Gun Kim, Sook Sin Chan, Kuan Shiong Khoo, Kit Wayne Chew, Pau Loke Show, Thi Ngoc Thu Tran, Thi Dong Phuong Nguyen, Chen Yaw Chiu
    Scientific Reports.2023;[Epub]     CrossRef
  • Identification and genomic analysis of Pseudosulfitobacter koreense sp. nov. isolated from toxin-producing dinoflagellate Alexandrium pacificum
    Yue Jiang, Zhun Li
    Archives of Microbiology.2023;[Epub]     CrossRef
  • Agromyces larvae sp. nov., a novel actinobacterium isolated from gut of larvae of Protaetia brevitarsis seulensis
    Miyoung Won, Parthiban Subramanian, Seunghwan Kim, Jun Heo, Hanako Naito, Tomomi Asano, Moriyuki Hamada, Soon-Wo Kwon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Antioxidant prodigiosin-producing cold-adapted Janthinobacterium sp. ERMR3:09 from a glacier moraine: Genomic elucidation of cold adaptation and pigment biosynthesis
    Srijana Mukhia, Anil Kumar, Rakshak Kumar
    Gene.2023; 857: 147178.     CrossRef
  • Oryzibacter oryziterrae gen. nov., sp. nov., isolated from rice paddy soil
    Hyo-Jin Lee, Kyung-Sook Whang
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Trinickia mobilis sp. nov. and Trinickia acidisoli sp. nov., isolated from soil
    You-qi Wang, Bing-nan Zhao, Xiu-yin Guo, Ke-cheng Wu, Li-hong Qiu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Metabolic Versatility of the FamilyHalieaceaeRevealed by the Genomics of Novel Cultured Isolates
    Shan-Hui Li, Ilnam Kang, Jang-Cheon Cho, Eva C. Sonnenschein
    Microbiology Spectrum.2023;[Epub]     CrossRef
  • Description of Luteibacter aegosomatis sp. nov., Luteibacter aegosomaticola sp. nov., and Luteibacter aegosomatissinici sp. nov. isolated from the Intestines of Aegosoma sinicum Larvae
    Hae-In Joe, Jee-Won Choi, June-Young Lee, Hojun Sung, Su-Won Jeong, Yun-Seok Jeong, Jae-Yun Lee, Jin-Woo Bae
    Journal of Microbiology.2023; 61(6): 603.     CrossRef
  • Alkalimarinus alittae sp. nov., isolated from gut of marine sandworm (Alitta virens) and emended description of the genus Alkalimarinus
    Ah-In Yang, Hae-In Joe, Hanna Choe, Han Sol Kim, Mi Kyung Eom, Zhun Li, Min Ok Jun, Bora Kim, Jung-Sook Lee, Na-Ri Shin
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Pan-Genome Analyses of the Genus Cohnella and Proposal of the Novel Species Cohnella silvisoli sp. nov., Isolated from Forest Soil
    Chunling Wang, Lutian Mao, Gegen Bao, Honghui Zhu
    Microorganisms.2023; 11(11): 2726.     CrossRef
  • Five novel Hymenobacter species isolated from air: Hymenobacter cellulosilyticus sp. nov., Hymenobacter cellulosivorans sp. nov., Hymenobacter aerilatus sp. nov., Hymenobacter sublimis sp. nov. and Hymenobacter volaticus sp. nov.
    Yiseul Kim, Parthiban Subramanian, Hyorim Choi, Hang-Yeon Weon, Seunghwan Kim, Soon-Wo Kwon, Daseul Lee, Byeong-Hak Han, Seung-Beom Hong, Jun Heo
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Vogesella aquatica sp. nov. and Vogesella margarita sp. nov., isolated from rivers in Southwest China
    Huibin Lu, Li Chen, Lingyang Kong, Linpei Huang, Guangjie Chen
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • tilS and rpoB: New Molecular Markers for Phylogenetic and Biodiversity Studies of the Genus Thiothrix
    Nikolai V. Ravin, Dmitry D. Smolyakov, Nikita D. Markov, Alexey V. Beletsky, Andrey V. Mardanov, Tatyana S. Rudenko, Margarita Yu. Grabovich
    Microorganisms.2023; 11(10): 2521.     CrossRef
  • Poseidonibacter ostreae sp. nov., Isolated from the Gut of Ostrea from the Seomjin River
    Kiwoon Baek, Sumin Jang, Eu Jin Chung, Shi Hyun Ryu, Ahyoung Choi
    Diversity.2023; 15(8): 920.     CrossRef
  • Paenibacillus dendrobii sp. nov., an indole-3-acetic acid-producing endophytic bacterium isolated from Dendrobium nobile
    Yadong Hu, Hongjie Li, Yaoyi Chen, Qiling Zhang, Shigang Zheng, Dan Rao, Ze Chun, Ruoxi Zhao
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Gillisia lutea sp. nov., isolated from marine aluminium residues from the Mediterranean sea
    Àngela Vidal-Verdú, Esther Molina-Menor, Javier Pascual, Juli Peretó, Manuel Porcar
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Flavobacterium potami sp. nov., a multi-metal resistance genes harbouring bacterium isolated from shallow river silt
    Shucheng Li, Sidi Mao, Weidong Mu, Bai Guo, Chen Li, Qing Zhu, Xiaoxiao Hou, Yanfang Zhao, Shuzhen Wei, Hongliang Liu, Aiju Liu
    Antonie van Leeuwenhoek.2023; 116(3): 265.     CrossRef
  • Ligilactobacillus cholophilus sp. nov., isolated from pickled potherb mustard (Brassica juncea Coss.)
    Quanlu Ren, Danqi Wang, Jin Han, Jing Wang, Zhenmin Liu, Zhengjun Wu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • EasyCGTree: a pipeline for prokaryotic phylogenomic analysis based on core gene sets
    Dao-Feng Zhang, Wei He, Zongze Shao, Iftikhar Ahmed, Yuqin Zhang, Wen-Jun Li, Zhe Zhao
    BMC Bioinformatics.2023;[Epub]     CrossRef
  • Genome-based analyses of the genus Acidovorax: proposal of the two novel genera Paracidovorax gen. nov., Paenacidovorax gen. nov. and the reclassification of Acidovorax antarcticus as Comamonas antarctica comb. nov. and emended description of the genus Ac
    Juan Du, Yang Liu, Honghui Zhu
    Archives of Microbiology.2023;[Epub]     CrossRef
  • Genomic insights of an alkaliphilic bacterium Halalkalibacter alkaliphilus sp. nov. isolated from an Indian Soda Lake
    Amaraja Joshi, Sonia Thite, Tushar Lodha, Neetha Joseph, Purva Mengade
    Antonie van Leeuwenhoek.2023; 116(5): 435.     CrossRef
  • Genome-Wide Pathway Exploration of the Epidermidibacterium keratini EPI-7T
    Yunseok Oh, Seyoung Mun, Young-Bong Choi, HyungWoo Jo, Dong-Geol Lee, Kyudong Han
    Microorganisms.2023; 11(4): 870.     CrossRef
  • Pseudomonas cucumis sp. nov., isolated from the rhizosphere of crop plants
    Kaiji Liao, Jianying Liu, Yi-Lin Gu, Can Wang, Hai-Lei Wei
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Three marine species of the genus Fulvivirga, rich sources of carbohydrate-active enzymes degrading alginate, chitin, laminarin, starch, and xylan
    Tra T. H. Nguyen, Tien Q. Vuong, Ho Le Han, Zhun Li, Yong-Jae Lee, Jaeho Ko, Olga I. Nedashkovskaya, Song-Gun Kim
    Scientific Reports.2023;[Epub]     CrossRef
  • Novosphingobium beihaiensis sp. nov., a novel pesticide-tolerant bacterium isolated from mangrove sediments
    Wenjin Hu, Yiying Huang, Yingjing Liu, Xiaoying Zhou, Shushi Huang, Jiemei Chu, Xinli Pan
    Antonie van Leeuwenhoek.2023; 116(11): 1151.     CrossRef
  • Paracoccus onchidii sp. nov., a moderately halophilic bacterium isolated from a marine invertebrate from the South China Sea
    Shan-shan Xu, Qi-liang Lai, Zeng-zhi Liu, Ying Xu
    Antonie van Leeuwenhoek.2023; 116(8): 801.     CrossRef
  • Ideonella oryzae sp. nov., isolated from soil, and Spirosoma liriopis sp. nov., isolated from fruits of Liriope platyphylla
    Yonghee Jung, Geeta Chhetri, Inhyup Kim, Yoonseop So, Sunho Park, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Mariniradius sediminis sp. nov., a multi-xenobiotics degrading genes harbouring bacterium isolated from sediment of river
    Shucheng Li, Weidong Mu, Haoran Liu, Bai Guo, Sidi Mao, Changqing Su, Hui Li, Zhiqiang Zhang, Aijv Liu, Shuzhen Wei, Hongliang Liu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Description of Xanthocytophaga agilis sp. nov. and Xanthocytophaga flavus sp. nov. of the new genus Xanthocytophaga gen. nov and the proposal of Rhodocytophagaceae fam. nov. within the order Cytophagales
    Xianjiao Zhang, Guang-Da Feng, Yang Liu, Fan Yang, Yanxuan Li, Xiaoqin Deng, Honghui Zhu, Qing Yao
    Archives of Microbiology.2023;[Epub]     CrossRef
  • A nostoxanthin-producing bacterium, Sphingomonas nostoxanthinifaciens sp. nov., alleviates the salt stress of Arabidopsis seedlings by scavenging of reactive oxygen species
    Lingmin Jiang, Jiyoon Seo, Yuxin Peng, Doeun Jeon, Ju Huck Lee, Cha Young Kim, Jiyoung Lee
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Halobacillus salinarum sp. nov., Halobacillus shinanisalinarum sp. nov. and Halobacillus amylolyticus sp. nov., isolated from saltern soil
    Yiseul Kim, Seunghwan Kim, Soon-Wo Kwon, Hang-Yeon Weon, Hanako Naito, Tomomi Asano, Moriyuki Hamada, Jun Heo
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Lignin-oxidizing and xylan-hydrolyzing Vibrio involved in the mineralization of plant detritus in the continental slope
    Jianyang Li, Chunming Dong, Biswarup Sen, Qiliang Lai, Linfeng Gong, Guangyi Wang, Zongze Shao
    Science of The Total Environment.2023; 854: 158714.     CrossRef
  • Alteromonas gilva sp. nov. and Erythrobacter fulvus sp. nov., isolated from a tidal mudflat
    Sunho Park, Inhyup Kim, Geeta Chhetri, Yoonseop So, Yonghee Jung, Haejin Woo, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Sphingobium nicotianae sp. nov., isolated from tobacco soil
    Rongrong Fan, Xiong Luo, Mengjuan Hong, Ruijia Yang, Xinyi Dong, Heli Shi, Mingshun Li
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Investigation of the potential of Brevibacillus spp. for the biosynthesis of nonribosomally produced bioactive compounds by combination of genome mining with MALDI-TOF mass spectrometry
    Jennifer Jähne, Stefanie Herfort, Joerg Doellinger, Peter Lasch, Le Thi Thanh Tam, Rainer Borriss, Joachim Vater
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Phylogenomic analysis of the genus Alcanivorax: proposal for division of this genus into the emended genus Alcanivorax and two novel genera Alloalcanivorax gen. nov. and Isoalcanivorax gen. nov.
    Anusha Rai, Gandham Suresh, Biswas Ria, Vighnesh L, Sreya PK, Sahu Ipsita, Chintalapati Sasikala, Chintalapati Venkata Ramana
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Corynebacterium oculi-related bacterium may act as a pathogen and carrier of antimicrobial resistance genes in dogs: a case report
    Milena Tresch, Christine Watté, Michele Stengard, Corinne Ritter, Isabelle Brodard, Simon Feyer, Estelle Gohl, Ezgi Akdesir, Vincent Perreten, Sonja Kittl
    BMC Veterinary Research.2023;[Epub]     CrossRef
  • Jeongeuplla avenae gen. nov., sp. nov., a novel β-carotene-producing bacterium that alleviates salinity stress in Arabidopsis
    Lingmin Jiang, Yuxin Peng, Ki-Hyun Kim, Doeun Jeon, Hanna Choe, Ah-Reum Han, Cha Young Kim, Jiyoung Lee
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Taxonomic descriptions of Aeromicrobium duanguangcaii sp. nov., Aeromicrobium wangtongii sp. nov. and Aeromicrobium senzhongii sp. nov.
    Lin Ye, Gui Zhang, Jing Yang, Caixin Yang, Yue Liu, Ji Pu, Yuyuan Huang, Sihui Zhang, Dong Jin, Shan Lu, Liyun Liu, Jianguo Xu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Characterization of four novel bacterial species of the genus Sphingomonas, Sphingomonas anseongensis, Sphingomonas alba, Sphingomonas brevis and Sphingomonas hankyongi sp.nov., isolated from wet land
    Muhammad Zubair Siddiqi, Govindan Rajivgandhi, Soon-Youl Lee, Wan-Taek Im
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Neiella litorisoli sp. nov., an alginate lyase: producing bacterium from South China Sea, and proposal of Echinimonadaceae fam. nov. in the order Alteromonadales
    Jing-Ran Sun, Kun-Lian Mo, Xue Li, Yong-Hua Hu, Zhi-Yuan Liu, Hui-Qin Huang
    Archives of Microbiology.2023;[Epub]     CrossRef
  • Paraburkholderia flagellata sp. nov. and Paraburkholderia adhaesiva sp. nov., two novel species isolated from forest soil in Dinghushan Biosphere Reserve in Guangdong, China
    Xiu-yin Guo, Ke-cheng Wu, Cheng-zhi Dong, Qiu-mei Zhang, Li-hong Qiu
    Antonie van Leeuwenhoek.2023; 116(10): 1023.     CrossRef
  • Comparative genomics reveals environmental adaptability and antimicrobial activity of a novel Streptomyces isolated from soil under black Gobi rocks
    Ying Wen, Binglin Zhang, Gaosen Zhang, Minghui Wu, Ximing Chen, Tuo Chen, Guangxiu Liu, Wei Zhang
    Antonie van Leeuwenhoek.2023; 116(12): 1407.     CrossRef
  • Phylotaxonomic assessment based on four core gene sets and proposal of a genus definition among the families Paracoccaceae and Roseobacteraceae
    Dao-Feng Zhang, Wei He, Zongze Shao, Iftikhar Ahmed, Yuqin Zhang, Wen-Jun Li, Zhe Zhao
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Pseudarthrobacter humi sp. nov., an actinobacterium isolated from soil
    Inhyup Kim, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Description of Salinimicrobium tongyeongense sp. nov., isolated from seawater
    Dariimaa Ganbat, Dong-Woo Lee, Seong-Bo Kim, Yong-Jik Lee, Gaewon Nam, Won-Jae Chi, Byoung-Hee Lee, You-Jung Jung, Jung-Sook Lee, Sang-Jae Lee
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Biocontrol potential of bacteria belonging to the Bacillus subtilis group against pests and diseases of agricultural interest through genome exploration
    Gabriela Teodoro Rocha, Paulo Roberto Martins Queiroz, Priscila Grynberg, Roberto Coiti Togawa, Antônia Débora Camila de Lima Ferreira, Izabela Nunes do Nascimento, Ana Cristina Meneses Mendes Gomes, Rose Monnerat
    Antonie van Leeuwenhoek.2023; 116(7): 599.     CrossRef
  • Mesorhizobium liriopis sp. nov., isolated from the fermented fruit of Liriope platyphylla a medicinal plant
    Inhyup Kim, Geeta Chhetri, Yoonseop So, Sunho Park, Yonghee Jung, Haejin Woo, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Tianweitania aestuarii sp. nov., isolated from a coastal dune, reclassification of Corticibacterium populi as Tianweitania populi comb. nov., and emended description of the genus Tianweitania
    Ji Hyeon Song, Sooyeon Park, Jung-Sook Lee, Wonyong Kim, Jung-Hoon Yoon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Roseobacter insulae sp. nov. and Loktanella gaetbuli sp. nov., isolated from tidal flats in the Yellow Sea in Korea
    Eun Bee Lee, Sooyeon Park, Wonyong Kim, Jung-Hoon Yoon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • UFCG: database of universal fungal core genes and pipeline for genome-wide phylogenetic analysis of fungi
    Dongwook Kim, Cameron L M Gilchrist, Jongsik Chun, Martin Steinegger
    Nucleic Acids Research.2023; 51(D1): D777.     CrossRef
  • Bioassay and Whole-Genome Analysis of Bacillus velezensis FIO1408, a Biocontrol Agent Against Pathogenic Bacteria in Aquaculture
    Wenhao Huang, Lingyun Qu, Ping Gao, Guangxun Du
    Current Microbiology.2023;[Epub]     CrossRef
  • VBCG: 20 validated bacterial core genes for phylogenomic analysis with high fidelity and resolution
    Renmao Tian, Behzad Imanian
    Microbiome.2023;[Epub]     CrossRef
  • Neoroseomonas alba sp. nov., Neoroseomonas nitratireducens sp. nov., Paraoseomonas indoligenes sp. nov and Paraoseomonas baculiformis sp. nov., isolated from the rhizosphere of paddy soil
    Yoonseop So, Geeta Chhetri, Inhyup Kim, Jiyoun Kim, Sunho Park, Yonghee Jung, Taegun Seo
    Antonie van Leeuwenhoek.2023; 116(10): 1009.     CrossRef
  • Microbacterium plantarum sp. nov. and Microbacterium thalli sp. nov., two endophytic metal-resistant bacteria isolated from Sphaeralcea angustifolia (Cav.) G. Don and Prosopis laevigata (Humb. et Bonpl. ex Willd) M.C. Johnston
    Ivan Arroyo-Herrera, Brenda Román-Ponce, Rafael Bustamante-Brito, Joseph Guevara-Luna, Violeta Larios-Serrato, Lorena Carro, Jose Mariano Igual, Otto Geiger, Ayixon Sánchez-Reyes, Paulina Estrada-de los Santos, En Tao Wang, María Soledad Vásquez-Murrieta
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Genome insight and probiotic potential of three novel species of the genus Corynebacterium
    Md Shamsuzzaman, Ram Hari Dahal, Shukho Kim, Jungmin Kim
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Marinobacterium lacunae sp. nov. isolated from estuarine sediment
    Srinivas Naga Radha Tanuku, Anil Kumar Pinnaka, Swarnaprava Behera, Aditya Singh, Sudharani Pydi, Gunjan Vasudeva, Bhumika Vaidya, Gunjan Sharma, Sampath Kumar Ganta, Naveen Sagar Garbhapu
    Archives of Microbiology.2023;[Epub]     CrossRef
  • Solicola gregarius gen. nov., sp. nov., a soil actinobacterium isolated after enhanced cultivation with Micrococcus luteus culture supernatant
    Marco A. Lopez Marin, Jachym Suman, Kunal Jani, Pavel Ulbrich, Tomas Cajthaml, Alena Filipova, Petr Pajer, Meina Neumann-Schaal, Michal Strejcek, Ondrej Uhlik
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Draft Genome Sequence of Afifella sp. Strain JA880, Isolated from a Salt Pond
    Jagadeeshwari Uppada, Sasikala Chintalapati, Venkata Ramana Chintalapati, J. Cameron Thrash
    Microbiology Resource Announcements.2023;[Epub]     CrossRef
  • Sphingomonas cremea sp. nov., isolated from ginseng soil
    Yuna Park, Qingzhen Liu, Soohyun Maeng, Hyejin Oh, Chan-Seok Yun, Hanna Choe, Hyang Burm Lee, Wan-Taek Im
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Marixanthotalea marina gen. nov., sp. nov., a bacterium in the family Flavobacteriaceae isolated from seawater
    Zi-Yue Fu, Hua-Peng Xue, Wei He, Guang-Yuan Ma, Ai Hua Zhang, Dao-Feng Zhang, Wen-Jun Li
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Aerococcus agrisoli sp. nov., isolated from paddy soil
    Lina Sun, Wen Qiu, Xinhua Gao, Zechao Cheng, Kaihua Huang, Wei Chen
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Bacillus changyiensis sp. nov., isolated from coastal sediment
    Guiqian Xiao, Qiliang Lai, Guangyu Li, Shanshan Wang, Yunyong Lin, Zongze Shao, Zhong Hu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Whole-genome sequencing of a biocontrol Myxococcus xanthus R31 isolate and comparative genomic analysis
    Honghong Dong, Ruixiang Gao, Yijie Dong, Qing Yao, Honghui Zhu
    Gene.2023; 863: 147286.     CrossRef
  • Comparative biodegradation analysis of three compostable polyesters by a marine microbial community
    Ingrid E. Meyer Cifuentes, Julius Degenhardt, Meina Neumann-Schaal, Nico Jehmlich, David Kamanda Ngugi, Başak Öztürk, Ning-Yi Zhou
    Applied and Environmental Microbiology.2023;[Epub]     CrossRef
  • Leucobacter allii sp. nov. and Leucobacter rhizosphaerae sp. nov., isolated from rhizospheres of onion and garlic, respectively
    Seunghwan Kim, Tomomi Asano, Hanako Naito, Moriyuki Hamada, Hang-Yeon Weon, Soon-Wo Kwon, Jun Heo
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Microcystis pangenome reveals cryptic diversity within and across morphospecies
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  • Oricola nitratireducens sp. nov., a novel nitrate reducing bacterium isolated from marine sediment in East China Sea
    Chaobo Guo, Xinyu Liu, Feilu Xie, Hong Ding, Shan He, Ning Wang, Weiyan Zhang
    Antonie van Leeuwenhoek.2023; 116(7): 711.     CrossRef
  • Runella salmonicolor sp. nov. and Dyella lutea sp. nov., isolated from paddy field soil
    Sunho Park, Inhyup Kim, Geeta Chhetri, Yoonseop So, Yonghee Jung, Haejin Woo, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Cellulosimicrobium fucosivorans is a later heterotypic synonym of Cellulosimicrobium composti
    Lingmin Jiang, Ho Le Han
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Gymnodinialimonas phycosphaerae sp. nov., a phycosphere bacterium isolated from Karlodinium veneficum
    Yuxin Peng, Lingmin Jiang, Yue Jiang, Jiyoon Seo, Doeun Jeon, Young-Min Kim, Zhun Li, Jiyoung Lee
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  • Larsenimonas rhizosphaerae sp. nov., isolated from a tidal mudflat
    Soon Dong Lee, In Seop Kim
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Alcanivorax xiamenensis sp. nov., a novel marine hydrocarbonoclastic bacterium isolated from surface seawater
    Qiliang Lai, Xiaoteng Fu, Jianning Wang, Chunming Dong, Liping Wang, Wanpeng Wang, Zongze Shao
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • High-quality full genome assembly of historic Xylella fastidiosa strains from ICMP collection using a hybrid sequencing approach
    Pragya Kant, Natasha Brohier, Rachel Mann, Luciano Rigano, Robert Taylor, Johanna Wong-Bajracharya, Toni A. Chapman, Monica Kehoe, Rebecca Roach, Brendan Rodoni, Fiona Constable, Vincent Michael Bruno
    Microbiology Resource Announcements.2023;[Epub]     CrossRef
  • Comammox Nitrospira and Ammonia-Oxidizing Archaea Are Dominant Ammonia Oxidizers in Sediments of an Acid Mine Lake Containing High Ammonium Concentrations
    Deyong Li, Zhichang Ren, Yangqi Zhou, Lugao Jiang, Min Zheng, Guoqiang Liu, Jennifer B. Glass
    Applied and Environmental Microbiology.2023;[Epub]     CrossRef
  • Combined Omics Approach Reveals Key Differences between Aerobic and Microaerobic Xylene-Degrading Enrichment Bacterial Communities: Rhodoferax─A Hitherto Unknown Player Emerges from the Microbial Dark Matter
    András Táncsics, Sinchan Banerjee, André Soares, Anna Bedics, Balázs Kriszt
    Environmental Science & Technology.2023; 57(7): 2846.     CrossRef
  • Sinomonas cellulolyticus sp. nov., isolated from Loktak lake
    Lhingjakim L. Khongsai, Jagadeeshwari Uppada, Shabbir Ahamad, Sasikala Chintalapati, Venkata Ramana Chintalapati
    Antonie van Leeuwenhoek.2023; 116(12): 1421.     CrossRef
  • Genomic and metabolic insights into the first host-associated isolate of Psychrilyobacter
    Meijia Liu, Guangshan Wei, Qiliang Lai, Zhaobin Huang, Min Li, Zongze Shao, Konstantinos Aristomenis Kormas, Muhamad Amin, Ruixuan Wang
    Microbiology Spectrum.2023;[Epub]     CrossRef
  • Emergence of Raoultella ornithinolytica in human infections from different hospitals in Ecuador with OXA-48-producing resistance
    José E. Villacís, Hugo G. Castelán-Sánchez, Jorge Rojas-Vargas, Ulises E. Rodríguez-Cruz, Viviana Albán, Jorge A. Reyes, Pablo M. Meza-Rodríguez, Sonia Dávila-Ramos, Fernando Villavicencio, Margarita Galarza, Monica C. Gestal
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Pseudodonghicola flavimaris sp. nov. and Sedimentitalea xiamensis sp. nov., two novel species belonging to the family Roseobacteraceae
    Jiamei Huang, Jianning Wang, Guangyu Li, Qiliang Lai, Xuying Zhu, Shanshan Wang, Xiupian Liu, Zongze Shao, Liping Wang
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Phylogeny and structural insights of lipase from Halopseudomonas maritima sp. nov., isolated from sea sand
    Ritu Rani Archana Kujur, Manisha Ghosh, Surajit Basak, Subrata K. Das
    International Microbiology.2023; 26(4): 1021.     CrossRef
  • Spirosoma oryzicola sp. nov., isolated from dried rice husk
    Miyoung Won, Jun Heo, Hang-Yeon Weon, Daseul Lee, Byeong-Hak Han, Seung-Beom Hong, Soon-Wo Kwon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Characterization of metagenome-assembled genomes of two endo-archaea of Candida tropicalis
    Uppada Jagadeeshwari, Chintalapati Sasikala, Anusha Rai, B. Indu, Sahu Ipsita, Chintalapati Venkata Ramana
    Frontiers in Microbiomes.2023;[Epub]     CrossRef
  • Pontibacterium sinense sp. nov., a nitrate-reducing and thiosulphate-oxidizing bacterium, isolated from coastal sediment
    Rui-Ying Chen, Rui-Jie Chen, De-Chen Lu, Ya Gong, Zong-Jun Du
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • UACG: Up-to-Date Archaeal Core Genes and Software for Phylogenomic Tree Reconstruction
    Seong-In Na, Michael James Bailey, Mauricio Chalita, Jae Hyoung Cho, Jongsik Chun
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  • Nocardioides pini sp. nov. and Nocardioides pinisoli sp. nov., two novel actinomycetes isolated from Pinus densiflora
    Yoonseop So, Geeta Chhetri, Inhyup Kim, Sunho Park, Yonghee Jung, Haejin Woo, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology.2023;[Epub]     CrossRef
  • Lacticaseibacillus huelsenbergensis sp. nov., isolated from grass silage and corn silage
    Monika Grabner F., Monika Grabner H., Hermine Schein, Elisabeth Weidenholzer, Tobias Busche, Christian Rückert-Reed, Marlene Buchebner-Jance
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  • Desulfovibrio mangrovi sp. nov., a sulfate-reducing bacterium isolated from mangrove sediments: a member of the proposed genus “Psychrodesulfovibrio”
    Jinjie Zhou, Cui-Jing Zhang, Meng Li
    Antonie van Leeuwenhoek.2023; 116(6): 499.     CrossRef
  • Devosia oryzisoli sp. nov., a novel moderately halotolerant bacterium isolated from the roots of rice plants and genome mining revealed the biosynthesis potential as plant growth promoter
    Geeta Chhetri, Inhyup Kim, Taegun Seo
    Antonie van Leeuwenhoek.2023; 116(3): 231.     CrossRef
  • Phosphorus Removal and Storage Polymer Synthesis by Tetrasphaera-Related Bacteria with Different Carbon Sources
    Zhaonian Yu, Shaoyi Xu, Peiliang Wang, Dezhao Liu, Huijie Lu
    ACS ES&T Water.2023; 3(5): 1374.     CrossRef
  • Phycobacter azelaicus gen. nov. sp. nov., a diatom symbiont isolated from the phycosphere of Asterionellopsis glacialis
    Lisa S. Y. Coe, Cong Fei, James Weston, Shady A. Amin
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Fluviispira vulneris sp. nov., isolated from human wound secretions
    Peijuan Tang, Na Peng, Pengwen Ouyang, Sheng Long, Zhenhua Wei, Xingchun Chen, Pinghua Qu, Liangyi Xie
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  • Revisiting the taxonomy of the genus Rhodopirellula with the proposal for reclassification of the genus to Rhodopirellula sensu stricto, Aporhodopirellula gen. nov., Allorhodopirellula gen. nov. and Neorhodopirellula gen. nov
    Pannikurungottu Sreya, Gandham Suresh, Anusha Rai, Biswas Ria, Lakshmanan Vighnesh, Vaibhav Chandrakant Agre, Uppada Jagadeeshwari, Chintalapati Sasikala, Chintalapati Venkata Ramana
    Antonie van Leeuwenhoek.2023; 116(3): 243.     CrossRef
  • Nocardioides cremeus sp. nov., Nocardioides abyssi sp. nov. and Nocardioides oceani sp. nov., three actinobacteria isolated from Western Pacific Ocean sediment
    Wenjing Wang, Yihan Ding, Shiping Wei, Miaomiao Yin, Gaiyun Zhang
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Gracilimonas sediminicola sp. nov., a moderately halotolerant bacterium isolated from seaweed sediment collected in the East Sea, Republic of Korea
    Yunjeong Lee, Veeraya Weerawongwiwat, Jong-Hwa Kim, Jung-Hoon Yoon, Jung-Sook Lee, Ampaitip Sukhoom, Wonyong Kim
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Peptoniphilus equinus sp. nov., a novel Gram-stain-positive anaerobic coccus isolated from the faeces of a thoroughbred racehorse
    Hye Su Jung, Jeong Ui Yun, Mi-Ja Jung, Hye Seon Song, Yeon Bee Kim, Yujin Kim, Joon-Gyu Kim, Che Ok Jeon, Seong Woon Roh, Tae Woong Whon, Se Hee Lee
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  • Holtiella tumoricola gen. nov. sp. nov., isolated from a human clinical sample
    Emma Allen-Vercoe, Michelle C. Daigneault, Sarah J. Vancuren, Kyla Cochrane, Lindsey L. O’Neal, Krithivasan Sankaranarayanan, Paul A. Lawson
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Gimibacter soli gen. nov. sp. nov., isolated from mangrove soil and insight into its ecological distribution and metabolic potential
    Yang Liu, Tao Pei, Jiao Duan, Juan Du, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Flavobacterium frigoritolerans sp. nov. and Flavobacterium shii sp. nov., isolated from glaciers on the Tibetan Plateau
    Lei-Lei Yang, Hong-Can Liu, Yu-Hua Xin, Qing Liu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Leucobacter edaphi sp. nov., a highly chromate-tolerant bacterium isolated from chromium containing chemical plant soil
    Bijun Zheng, Zhe Xu, Li Yang, Guangyang Jiang, Jia Chen, Yichen Yang, Yongqiang Tian
    Antonie van Leeuwenhoek.2023; 116(12): 1433.     CrossRef
  • Nitratireductor luteus sp. nov. isolated from saline-alkali land
    Xinping Yang, Liuyan Zhou, Xiaowu Wang, Zhifang Wang, Pengbin Li, Jinping Dai, Huitao Zhang, Yuqing Xie
    Antonie van Leeuwenhoek.2023; 116(3): 221.     CrossRef
  • Melaminivora suipulveris sp. nov., isolated from pigpen dust
    Miyoung Won, Jun Heo, Daseul Lee, Byeong-Hak Han, Seung-Beom Hong, Soon-Wo Kwon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Trinickia violacea sp. nov. and Trinickia terrae sp. nov., isolated from forest soil
    Zeng-hong Gao, Xiu-yin Guo, Yi-zhi Liu, Qiu-mei Zhang, Xin-jie Tong, Li-hong Qiu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Polycladospora coralii gen. nov., sp. nov., a novel member of the family Thermoactinomycetaceae isolated from stony coral in the South China Sea
    Kunlian Mo, Huiqin Huang, Lin Ye, Qingjuan Wu, Yong hua Hu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Comparative genomics and transcriptomics insight into myxobacterial metabolism potentials and multiple predatory strategies
    Chunling Wang, Yi Xiao, Yong Wang, Yumin Liu, Qing Yao, Honghui Zhu
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  • Acinetobacter thutiue sp. nov. Isolated from Oil-Contaminated Soil in Motorbike Repair Workshops
    Nhan Le Thi Tuyet, Jaisoo Kim
    Diversity.2023; 15(12): 1179.     CrossRef
  • Chryseobacterium edaphi sp. nov. and Chryseobacterium gilvum sp. nov., isolated from soil
    Yonghee Jung, Geeta Chhetri, Inhyup Kim, Yoonseop So, Sunho Park, Haejin Woo, Ki-Ho Lee, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Ten Novel Species Belonging to the Genus Flavobacterium, Isolated from Freshwater Environments: F. praedii sp. nov., F. marginilacus sp. nov., F. aestivum sp. nov., F. flavigenum sp. nov., F. luteolum sp. nov., F. gelatinilyticum sp. nov., F. aquiphilum s
    Hyunyoung Jo, Miri S. Park, Yeonjung Lim, Ilnam Kang, Jang-Cheon Cho
    Journal of Microbiology.2023; 61(5): 495.     CrossRef
  • Description of Flavobacterium agricola sp. nov., an auxin producing bacterium isolated from paddy field
    Shih-Yao Lin, Asif Hameed, Chia-Fang Tsai, Chiu-Chung Young
    Antonie van Leeuwenhoek.2023; 116(12): 1345.     CrossRef
  • Blastopirellula sediminis sp. nov. a new member of Pirellulaceae isolated from the Andaman and Nicobar Islands
    P. K. Sreya, Kumar Gaurav, Shabbir Ahmed, Chintalapati Sasikala, Chintalapati Venkata Ramana
    Antonie van Leeuwenhoek.2023; 116(5): 463.     CrossRef
  • Macromonas nakdongensis sp. nov., Isolated from Freshwater and Characterization of Bacteriophage BK-30P—The First Phage That Infects Genus Macromonas
    Kiwoon Baek, Ahyoung Choi
    Microorganisms.2023; 11(9): 2237.     CrossRef
  • Sphingomonas lycopersici sp. nov., isolated from tomato rhizosphere soil
    Ruixiang Gao, Honghong Dong, Yang Liu, Qing Yao, Huaping Li, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Staphylococcus brunensis sp. nov. isolated from human clinical specimens with a staphylococcal cassette chromosome-related genomic island outside of the rlmH gene bearing the ccrDE r
    Vojtěch Kovařovic, Adéla Finstrlová, Ivo Sedláček, Petr Petráš, Pavel Švec, Ivana Mašlaňová, Meina Neumann-Schaal, Ondrej Šedo, Tibor Botka, Eva Staňková, Jiří Doškař, Roman Pantůček, Shannon D. Manning
    Microbiology Spectrum.2023;[Epub]     CrossRef
  • The Raphidiopsis (= Cylindrospermopsis) raciborskii pangenome updated: Two new metagenome-assembled genomes from the South American clade
    Marcele Laux, Carlos Morais Piroupo, João Carlos Setubal, Alessandra Giani
    Harmful Algae.2023; 129: 102518.     CrossRef
  • Marivirga aurantiaca sp. nov., a halophilic nitrite-reducing bacterium, isolated from intertidal surface sediments
    Mingxia Zhang, Yulian Zhang, Qing Yao, Fan Yang, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Agromyces chromiiresistens sp. nov., Novosphingobium album sp. nov., Sphingobium arseniciresistens sp. nov., Sphingomonas pollutisoli sp. nov., and Salinibacterium metalliresistens sp. nov.: five new members of Microbacteriaceae and Sphingomonadaceae from
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    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Sphingomonas oryzagri sp. nov., isolated from a rice field
    Md. Amdadul Huq, Sun-Young Lee, Md. Shahedur Rahman, Shahina Akter
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Tsuneonella litorea sp. nov., a novel carotenoid-producing bacterium isolated from coastal sediment
    Yizhou He, Yang Liu, Tao Pei, Jiao Duan, Juan Du, Xiaoqin Deng, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Gramella oceanisediminis sp. nov., isolated from deep-sea sediment of the Indian Ocean
    Lin Yang, Haolei Shi, Qian Li, Minggang Zheng, Qiliang Lai, Li Zheng
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Pseudomonas petrae sp. nov. isolated from regolith samples in Antarctica
    Dana Nováková, Vendula Koublová, Karel Sedlář, Eva Staňková, Stanislava Králová, Pavel Švec, Meina Neumann-Schaal, Jacqueline Wolf, Sylva Koudelková, Miloš Barták, Ivo Sedláček
    Systematic and Applied Microbiology.2023; 46(4): 126424.     CrossRef
  • Paraflavisolibacter caeni gen. nov., sp. nov., a novel taxon within the family Chitinophagaceae isolated from sludge
    Cansheng Yuan, Bin Liu, Lin Wang, Weihua Long, Zhuang Ke, Jian He
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Shimia ponticola sp. nov., an aerobic anoxygenic photoheterotrophic bacterium, isolated from surface seawater in the South China Sea
    Qi Chen, Bowen He, Ta-Hui Lin, Nianzhi Jiao, Qiang Zheng
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • From sequences to species: Charting the phytoplasma classification and taxonomy in the era of taxogenomics
    Kiran Kirdat, Bhavesh Tiwarekar, Shivaji Sathe, Amit Yadav
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Thermobacterium salinum gen. nov., sp. nov., a novel member of the family Flavobacteriaceae isolated from a hydrothermal zone
    Beihan Chen, Haichen Zhang, Dan Lin, Jianing Ye, Kai Tang
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Phenotypic and Genomic Characterization of Streptomyces pakalii sp. nov., a Novel Species with Anti-Biofilm and Anti-Quorum Sensing Activity in ESKAPE Bacteria
    Michelle Chávez-Hernández, Jossue Ortiz-Álvarez, Jesús Morales-Jiménez, Lourdes Villa-Tanaca, César Hernández-Rodríguez
    Microorganisms.2023; 11(10): 2551.     CrossRef
  • Dyella humicola sp. nov., Dyella subtropica sp. nov., Dyella silvatica sp. nov. and Dyella silvae sp. nov., isolated from subtropical forest soil
    Guang-Da Feng, Xiaoqin Deng, Jiali Li, Wendi Chen, Xianjiao Zhang, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Hufsiella ginkgonis gen. nov., sp. nov. and Hufsiella arboris sp. nov., isolated from tree barks
    Heeyoung Kang, Seokhyeon Bae, Haneul Kim, Kiseong Joh
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Description ofDefluviimonas salinarumsp. nov. with the potential of benzene-degradation isolated from saltern in the Yellow Seacoast
    Yunjeong Lee, Jong-Hwa Kim, Jung-Hoon Yoon, Jung-Sook Lee, Ampaitip Sukhoom, Wonyong Kim
    FEMS Microbiology Letters.2023;[Epub]     CrossRef
  • Genomic potential for inorganic carbon sequestration and xenobiotic degradation in marine bacterium Youngimonas vesicularis CC-AMW-ET affiliated to family Paracoccaceae
    Asif Hameed, Kokkarambath Vannadil Suchithra, Shih-Yao Lin, Paul Stothard, Chiu-Chung Young
    Antonie van Leeuwenhoek.2023; 116(11): 1247.     CrossRef
  • Polyphasic Characterization and Genomic Insights into an Aerobic Denitrifying Bacterium, Shewanella zhuhaiensis sp. nov., Isolated from a Tidal Flat Sediment
    Yang Liu, Tao Pei, Juan Du, Honghui Zhu
    Microorganisms.2023; 11(12): 2870.     CrossRef
  • Pseudomonas quebecensis sp. nov., a bacterium isolated from root-zone soil of a native legume, Amphicarpaea bracteata (L.) Fernald, in Quebec, Canada
    James T. Tambong, Renlin Xu, Sylvia I. Chi, Isabelle Birugu, Sylvia Bachelet, Conrad Hutter, Marc-Olivier Duceppe, Stephan Brière
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Taxogenomics of Alkalihalobacterium chitinilyticum sp. nov.: an alkaliphilic chitin degrading bacterial strain isolated from Lonar Lake, India, with potential biotechnological applications
    Sonia Thite, Kamakshi Tarwadge, Purva Mengade, Tushar Lodha, Neetha Joseph, Lucky Thakkar, Amaraja Joshi
    Antonie van Leeuwenhoek.2023; 116(11): 1103.     CrossRef
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    Jun Wang, Qiang Zheng, Shasha Wang, Jialing Zeng, Qing Yuan, Yangsheng Zhong, Lijing Jiang, Zongze Shao
    Frontiers in Marine Science.2023;[Epub]     CrossRef
  • Pseudomonas citri sp. nov., a potential novel plant growth promoting bacterium isolated from rhizosphere soil of citrus
    Hong Gao, Guang-Da Feng, Zengwei Feng, Qing Yao, Jiali Li, Xiaoqin Deng, Xiaoran Li, Honghui Zhu
    Antonie van Leeuwenhoek.2023; 116(3): 281.     CrossRef
  • Pontibacter liquoris sp. nov. and Pontibacter vulgaris sp. nov., two novel bacteria isolated from the pit mud of Chinese liquor
    Chaobo Guo, Haohao Wang, Xinyu Liu, Yifan Guo, Shan He, Lijian Ding, Weiyan Zhang
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Pseudophaeobacter profundi sp. nov., isolated from the Western Pacific Ocean
    Xuying Zhu, Liping Wang, Qiliang Lai, Jianning Wang, Jiamei Huang, Guangyu Li, Lingyu Zeng, Jingyu Xia, Zongze Shao
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Physiological and genomic analyses of cobalamin (vitamin B12)-auxotrophy of Lysobacter auxotrophicus sp. nov., a methionine-auxotrophic chitinolytic bacterium isolated from chitin-treated soil
    Akihiro Saito, Hideo Dohra, Moriyuki Hamada, Ryota Moriuchi, Yohei Kotsuchibashi, Koji Mori
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Hyperactive nanobacteria with host-dependent traits pervade Omnitrophota
    Cale O. Seymour, Marike Palmer, Eric D. Becraft, Ramunas Stepanauskas, Ariel D. Friel, Frederik Schulz, Tanja Woyke, Emiley Eloe-Fadrosh, Dengxun Lai, Jian-Yu Jiao, Zheng-Shuang Hua, Lan Liu, Zheng-Han Lian, Wen-Jun Li, Maria Chuvochina, Brianna K. Finley
    Nature Microbiology.2023; 8(4): 727.     CrossRef
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    Pengyuan Liu, Songbao Zou, Haikun Zhang, Qing Liu, Zenglei Song, Yanyan Huang, Xiaoke Hu
    Frontiers in Marine Science.2023;[Epub]     CrossRef
  • ComammoxNitrospirabacteria outnumber canonical nitrifiers irrespective of electron donor mode and availability in biofiltration systems
    Katherine J Vilardi, Irmarie Cotto, Maria Sevillano, Zihan Dai, Christopher L Anderson, Ameet Pinto
    FEMS Microbiology Ecology.2022;[Epub]     CrossRef
  • Glycoside hydrolase subfamily GH5_57 features a highly redesigned catalytic interface to process complex hetero-β-mannans
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    Acta Crystallographica Section D Structural Biology.2022; 78(11): 1358.     CrossRef
  • Alexandriicola marinus gen. nov., sp. nov., a new member of the family Rhodobacteraceae isolated from marine phycosphere
    Wen-Zhuo Zhu, Hui-Min Gao, Ya-Ming Ge, Jun Dai, Xi Yang, Xiao-Ling Zhang, Qiao Yang
    Antonie van Leeuwenhoek.2022; 115(4): 473.     CrossRef
  • In silico, in vitro and in vivo safety evaluation of Limosilactobacillus reuteri strains ATCC PTA-126787 & ATCC PTA-126788 for potential probiotic applications
    Dharanesh Gangaiah, Shrinivasrao P. Mane, Nilesh R. Tawari, Nallakannu Lakshmanan, Valerie Ryan, Alyssa Volland, Dwi Susanti, Milind Patel, Abraham Abouzeid, Emily B. Helmes, Arvind Kumar, Konstantinos Papadimitriou
    PLOS ONE.2022; 17(1): e0262663.     CrossRef
  • Alicyclobacillus curvatus sp. nov. and Alicyclobacillus mengziensis sp. nov., two acidophilic bacteria isolated from acid mine drainage
    Zhen Jiang, Dildar Wu, Zong-Lin Liang, Xiu-Tong Li, Ye Huang, Nan Zhou, Zheng-Hua Liu, Guang-Ji Zhang, Yan Jia, Hua-Qun Yin, Shuang-Jiang Liu, Cheng-Ying Jiang
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Genome-based taxonomic classification of the closest-to-Comamonadaceae group supports a new family Sphaerotilaceae fam. nov. and taxonomic revisions
    Yang Liu, Juan Du, Tao Pei, Hanqin Du, Guang-Da Feng, Honghui Zhu
    Systematic and Applied Microbiology.2022; 45(6): 126352.     CrossRef
  • Paraphocaeicola brunensis gen. nov., sp. nov., Carrying Two Variants of nimB Resistance Gene from Bacteroides fragilis, and Caecibacteroides pullorum gen. nov., sp. nov., Two Novel G
    Stanislava Kralova, Lenka Davidova-Gerzova, Adam Valcek, Matej Bezdicek, Ivan Rychlik, Veronika Rezacova, Alois Cizek, Jeffrey A. Gralnick
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  • Antrihabitans stalagmiti sp. nov., isolated from a larva cave and a proposal to transfer Rhodococcus cavernicola Lee et al. 2020 to a new genus Spelaeibacter as Spelaeibacter cavernicola gen. nov. comb. nov
    Sung-Min Kim, Soon Dong Lee, Young Sang Koh, In Seop Kim
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  • Sphingopyxis lutea sp. nov., a novel moderately halotolerant bacterium isolated from pebbles
    Geeta Chhetri, Inhyup Kim, Taegun Seo
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Nocardioides nematodiphilus sp. nov., isolated from rhizosphere of Arabidopsis thaliana
    Xue-Mei Zhang, Wan-Ting Mo, Yu-Qian Wei, Xin Li, Gui-Mei Ma, Yu-Sen Yang, Xue-Jian Wang, Jian-Jin Liu, Zi-Yi Liu, Xing-Kui Zhou, Ti-Kun Zhang
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Sedimentimonas flavescens gen. nov., sp. nov., isolated from sediment of Clam Island, Liaoning Province
    Lulu Mu, Xueping Zhang, Yanfeng Zhang, Zemin Fang, Yazhong Xiao
    Antonie van Leeuwenhoek.2022; 115(8): 979.     CrossRef
  • Pseudomonas oligotrophica sp. nov., a Novel Denitrifying Bacterium Possessing Nitrogen Removal Capability Under Low Carbon–Nitrogen Ratio Condition
    Mingxia Zhang, Anzhang Li, Qing Yao, Botao Xiao, Honghui Zhu
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Panacibacter microcysteis sp. nov., isolated from a eutrophic reservoir during the Microcystis bloom period
    Ve Van Le, So-Ra Ko, Mingyeong Kang, Sang-Ah Lee, Hee-Mock Oh, Chi-Yong Ahn
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Ruegeria alba sp. nov., Isolated from a Tidal Flat Sediment
    Juan Du, Yang Liu, Tao Pei, Anzhang Li, Honghui Zhu
    Current Microbiology.2022;[Epub]     CrossRef
  • Larkinella humicola sp. nov., a gamma radiation-resistant bacterium isolated from soil
    Yuna Park, Leonid N. Ten, Young Koung Lee, Hee‑Young Jung, Myung Kyum Kim
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  • Oral and gut dysbiosis leads to functional alterations in Parkinson’s disease
    Sungyang Jo, Woorim Kang, Yun Su Hwang, Seung Hyun Lee, Kye Won Park, Mi Sun Kim, Hyunna Lee, Hyung Jeong Yoon, Yoo Kyoung Park, Mauricio Chalita, Je Hee Lee, Hojun Sung, Jae-Yun Lee, Jin-Woo Bae, Sun Ju Chung
    npj Parkinson's Disease.2022;[Epub]     CrossRef
  • Colwellia maritima sp. nov. and Polaribacter marinus sp. nov., isolated from seawater
    Sylvia Kristyanto, Jaejoon Jung, Jeong Min Kim, Keunpil Kim, Mi-hwa Lee, Lujiang Hao, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Hymenobacter translucens sp. nov. and Hymenobacter pini sp. nov. isolated from soil
    Minji Bang, Myung Kyum Kim, Hee‑Young Jung
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Chryseobacterium subflavum sp. nov., isolated from soil
    Delong Kong, Yan Wang, Qingqing Li, Yanzheng Zhou, Xu Jiang, Zhen Xing, Zhiye Wang, Zhiyong Ruan
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Acetobacter vaccinii sp. nov., a novel acetic acid bacterium isolated from blueberry fruit (Vaccinium corymbosum L.)
    Jun Heo, Atena Sadat Sombolestani, David Laureys, Jessika De Clippeleer, Miyoung Won, Peter Vandamme, Soon-Wo Kwon
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Neotabrizicola shimadae gen. nov., sp. nov., an aerobic anoxygenic phototrophic bacterium harbouring photosynthetic genes in the family Rhodobacteraceae, isolated from a terrestrial hot spring
    So Muramatsu, Setsuko Hirose, Takao Iino, Moriya Ohkuma, Satoshi Hanada, Shin Haruta
    Antonie van Leeuwenhoek.2022; 115(6): 731.     CrossRef
  • Pedomonas mirosovicensis gen. nov., sp. nov., a bacterium isolated from soil with the aid of Micrococcus luteus culture supernatant containing resuscitation-promoting factor
    Marco A. Lopez Marin, Jachym Suman, Kunal Jani, Pavel Ulbrich, Tomas Cajthaml, Petr Pajer, Jacqueline Wolf, Meina Neumann-Schaal, Michal Strejcek, Ondrej Uhlik
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Streptococcus oriscaviae sp. nov. Infection Associated with Guinea Pigs
    Jade L. L. Teng, Yuanchao Ma, Jonathan H. K. Chen, Ruibang Luo, Chuen-Hing Foo, Tsz Tuen Li, Jordan Y. H. Fong, Weiming Yao, Samson S. Y. Wong, Kitty S. C. Fung, Susanna K. P. Lau, Patrick C. Y. Woo, Jasna Kovac
    Microbiology Spectrum.2022;[Epub]     CrossRef
  • Paracidobacterium acidisoli gen. nov., sp. nov. and Alloacidobacterium dinghuense gen. nov., sp. nov., two acidobacteria isolated from forest soil, and reclassification of Acidobacterium ailaaui and Acidipila dinghuensis as Pseudacidobacteriu
    Qiu-mei Zhang, Jia-cheng Fu, Zhi-qin Chen, Li-hong Qiu
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Non‐ribosomal peptide biosynthetic potential of the nematode symbiont Photorhabdus
    Ao‐Qi Du, Ti‐Ti Ying, Zhen‐Yi Zhou, Wen‐Chao Yu, Gang‐Ao Hu, Xian Luo, Man‐Jing Ma, Yan‐Lei Yu, Hong Wang, Bin Wei
    Environmental Microbiology Reports.2022; 14(6): 917.     CrossRef
  • Chryseobacterium oryzae sp. nov. and Chryseobacterium suipulveris sp. nov., isolated from Andong sikhye and pigpen dust, respectively
    Jun Heo, Miyoung Won, Daseul Lee, Jeong-Seon Kim, Byeong-Hak Han, Soo-Jin Kim, Seung-Beom Hong, Soon-Wo Kwon
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Metagenomic evidence of a novel family of anammox bacteria in a subsea environment
    Carolina Suarez, Paula Dalcin Martins, Mike S.M. Jetten, Sabina Karačić, Britt Marie Wilén, Oskar Modin, Per Hagelia, Malte Hermansson, Frank Persson
    Environmental Microbiology.2022; 24(5): 2348.     CrossRef
  • Evolutionary Principles of Bacterial Signaling Capacity and Complexity
    Ran Mo, Yugeng Liu, Yuanyuan Chen, Yingjin Mao, Beile Gao, Qijing Zhang
    mBio.2022;[Epub]     CrossRef
  • Pseudomonas phenolilytica sp. nov., a novel phenol-degrading bacterium
    Ritu Rani Archana Kujur, Subrata K. Das
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Pontibacter pamirensis sp. nov., isolated from saline-alkaline soil
    Fang Liu, Yang-Yang Liu, Yu-Qian Li, Rui-Feng Lei, Qin Ma, Dilireba Abudourousuli, Zulihumaer Rouzi, Muyesaier Aosiman, Deng-Di An, Wen-Jun Li
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Limosilactobacillus reuteri DS0384 promotes intestinal epithelial maturation via the postbiotic effect in human intestinal organoids and infant mice
    Hana Lee, Kwang Bo Jung, Ohman Kwon, Ye Seul Son, Eunho Choi, Won Dong Yu, Naeun Son, Jun Hyoung Jeon, Hana Jo, Haneol Yang, Yeong Rak Son, Chan-Seok Yun, Hyun-Soo Cho, Sang Kyu Kim, Dae-Soo Kim, Doo-Sang Park, Mi-Young Son
    Gut Microbes.2022;[Epub]     CrossRef
  • Some like it cold: the cellular organization and physiological limits of cold‐tolerant nitrite‐oxidizing Nitrotoga
    Sabine Keuter, Hanna Koch, Katharina Sass, Simone Wegen, Natuschka Lee, Sebastian Lücker, Eva Spieck
    Environmental Microbiology.2022; 24(4): 2059.     CrossRef
  • Horticoccus luteus gen. nov., sp. nov., A Novel Member of the Phylum Verrucomicrobia Isolated from a Dichlorodiphenyltrichloroethane (DDT)-Contaminated Orchard Soil
    Joon-hui Chung, Ja-Yeon Lee, Geun-Hyung Choi, Miyoung Won, Jehyeong Yeon, Younggun Yoon, Si-Hyun An, Da-Yeon Kim, InCheol Park, Ye-eun Kim, Jae-Hyung Ahn
    Current Microbiology.2022;[Epub]     CrossRef
  • Burkholderia orbicola sp. nov., a novel species within the Burkholderia cepacia complex
    Leslie-Mariana Morales-Ruíz, Mariana Rodríguez-Cisneros, Jeniffer-Chris Kerber-Díaz, Fernando-Uriel Rojas-Rojas, J. Antonio Ibarra, Paulina Estrada-de los Santos
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Assessing the utility of mitochondrial gene markers in the family Suessiaceae (Dinophyta) with phylogenomic validation
    Se Hyeon Jang, Seong In Na, Moo Joon Lee, Yeong Du Yoo
    Molecular Phylogenetics and Evolution.2022; 177: 107625.     CrossRef
  • Taxonomic and Bioactivity Characterizations of Mameliella alba Strain LZ-28 Isolated from Highly Toxic Marine Dinoflagellate Alexandrium catenella LZT09
    Cheng-Zhe Ren, Hui-Min Gao, Jun Dai, Wen-Zhuo Zhu, Fei-Fei Xu, Yun Ye, Xiao-Ling Zhang, Qiao Yang
    Marine Drugs.2022; 20(5): 321.     CrossRef
  • Nocardioides panacis sp. nov., isolated from soil of a ginseng field
    Yuna Park, Qingzhen Liu, Soohyun Maeng, Won Jung Choi, Yoonjee Chang, Wan-Taek Im
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Water quality drives the distribution of freshwater cable bacteria
    Meijun Dong, Shan Yang, Xunan Yang, Meiying Xu, Wenzhe Hu, Bin Wang, Youda Huang, Jiarou Xu, Huibin Lu, Yonggang Yang, Xingjuan Chen, Haobin Huang, Guoping Sun
    Science of The Total Environment.2022; 841: 156468.     CrossRef
  • Vibrio ostreae sp. nov., a novel gut bacterium isolated from a Yellow Sea oyster
    Neak Muhammad, Tra T.H. Nguyen, Yong-Jae Lee, Jaeho Ko, Forbes Avila, Song-Gun Kim
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Flavobacterium endoglycinae sp. nov., an endophytic bacterium isolated from soybean (Glycine max L. cv. Gwangan) stems
    Jiyoon Seo, Yuxin Peng, Lingmin Jiang, Sang-Beom Lee, Rae-Dong Jeong, Soon Ju Park, Cha Young Kim, Man-Soo Choi, Jiyoung Lee
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Draft Genome Sequence of Methanobacterium paludis IBT-C12, Recovered from Sediments of the Apatlaco River, Mexico
    Erick Alejandro Sánchez-Salazar, Lizbeth Hernández-Jaimes, Luz Breton-Deval, Ayixon Sánchez-Reyes, Frank J. Stewart
    Microbiology Resource Announcements.2022;[Epub]     CrossRef
  • Successful Direct Whole Genome Sequencing and Revivification of Freeze-Dried Nontuberculous Mycobacteria after More than Half a Century of Storage
    Xenia Emilie Sinding Iversen, Anders Norman, Dorte Bek Folkvardsen, Erik Svensson, Erik Michael Rasmussen, Troels Lillebaek, Sébastien P. Faucher
    Microbiology Spectrum.2022;[Epub]     CrossRef
  • Bacterial filamentation as a mechanism for cell-to-cell spread within an animal host
    Tuan D. Tran, Munira Aman Ali, Davin Lee, Marie-Anne Félix, Robert J. Luallen
    Nature Communications.2022;[Epub]     CrossRef
  • Greater functional diversity and redundancy of coral endolithic microbiomes align with lower coral bleaching susceptibility
    Anny Cárdenas, Jean-Baptiste Raina, Claudia Pogoreutz, Nils Rädecker, Jeremy Bougoure, Paul Guagliardo, Mathieu Pernice, Christian R Voolstra
    The ISME Journal.2022; 16(10): 2406.     CrossRef
  • Comparative Genomics Reveal the Animal-Associated Features of the Acanthopleuribacteraceae Bacteria, and Description of Sulfidibacter corallicola gen. nov., sp., nov.
    Guanghua Wang, Yuanjin Li, Jianfeng Liu, Biao Chen, Hongfei Su, Jiayuan Liang, Wen Huang, Kefu Yu
    Frontiers in Microbiology.2022;[Epub]     CrossRef
  • Dyella sedimenti sp. nov., Isolated from the Sediment of a Winery
    Li Gao, Yuan-Dong Li, Xing-Kui Zhou, Xiu-Ming Liu, Hui-Tian Li, Wen-Jun Li, Yan-Qing Duan
    Current Microbiology.2022;[Epub]     CrossRef
  • Arenibacterium arenosum sp. nov., isolated from sea sand
    Jiseon Jeong, Veeraya Weerawongwiwat, Jong-Hwa Kim, Min Kuk Suh, Han Sol Kim, Jung-Sook Lee, Jung-Hoon Yoon, Ampaitip Sukhoom, Wonyong Kim
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Gordonia pseudamarae sp. nov., a home for novel actinobacteria isolated from stable foams on activated sludge wastewater treatment plants
    Raúl Riesco, Jayson J. A. Rose, Steven Batinovic, Steve Petrovski, Fernando Sánchez-Juanes, Robert J. Seviour, Michael Goodfellow, Martha E. Trujillo
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Predicting butyrate- and propionate-forming bacteria of gut microbiota from sequencing data
    Berenike Kircher, Sabrina Woltemate, Frank Gutzki, Dirk Schlüter, Robert Geffers, Heike Bähre, Marius Vital
    Gut Microbes.2022;[Epub]     CrossRef
  • Kaistella soli sp. nov., isolated from oil-contaminated experimental soil
    Dhiraj Kumar Chaudhary, Ram Hari Dahal, Joung-Ho Park, Yongseok Hong
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Halomonas salinarum sp. nov., a moderately halophilic bacterium isolated from saline soil in Yingkou, China
    Ya-Lin Yin, Fang-Ling Li, Lei Wang
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Neoroseomonas marina sp. nov., Isolated from a Beach Sand
    Anusha Rai, Jagadeeshwari Uppada, Deepshikha Gupta, Smita Nandardhane, Ipsita Sahu, Sasikala Chintalapati, Venkata Ramana Chintalapati
    Current Microbiology.2022;[Epub]     CrossRef
  • Paenibacillus albicereus sp. nov. and Niallia alba sp. nov., isolated from digestive syrup
    Vipool Thorat, Kiran Kirdat, Bhavesh Tiwarekar, Priyanka Dhanavade, Prachi Karodi, Yogesh Shouche, Shivaji Sathe, Tushar Lodha, Amit Yadav
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Identification of Mucilaginibacter conchicola sp. nov., Mucilaginibacter achroorhodeus sp. nov. and Mucilaginibacter pallidiroseus sp. nov. and emended description of the genus Mucilaginibacter
    Jiyoun Kim, Byungjo Lee, Geeta Chhetri, Inhyup Kim, Yoonseop So, Wonhee Jang, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Pusillimonas faecipullorum sp. nov., isolated from the poultry manure
    Shih-Yao Lin, Asif Hameed, Chia-Fang Tsai, Yu-Shan Tang, Chiu-Chung Young
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Unveiling the genomic potential of Pseudomonas type strains for discovering new natural products
    Zaki Saati-Santamaría, Nelly Selem-Mojica, Ezequiel Peral-Aranega, Raúl Rivas, Paula García-Fraile
    Microbial Genomics .2022;[Epub]     CrossRef
  • A genomic overview including polyphasic taxonomy of Thalassoroseus pseudoceratinae gen. nov., sp. nov. isolated from a marine sponge, Pseudoceratina sp.
    Gaurav Kumar, Uppada Jagadeeshwari, Pannikurungottu Sreya, Ahmed Shabbir, Chintalapati Sasikala, Chintalapati Venkata Ramana
    Antonie van Leeuwenhoek.2022; 115(7): 843.     CrossRef
  • Novosphingobium percolationis sp. nov. and Novosphingobium huizhouense sp. nov., isolated from landfill leachate of a domestic waste treatment plant
    Xiaoling He, Huibin Lu, Wenzhe Hu, Tongchu Deng, Xiaofan Gong, Xunan Yang, Da Song, Mei He, Meiying Xu
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Development of a Novel Real-Time Polymerase Chain Reaction Assay to DetectEscherichia albertiiin Chicken Meat
    Sakura Arai, Tadasuke Ooka, Mizuha Shibata, Yuhki Nagai, Yuki Tokoi, Hiromi Nagaoka, Rika Maeda, Akihiko Tsuchiya, Yuka Kojima, Kenji Ohya, Takahiro Ohnishi, Noriko Konishi, Kayoko Ohtsuka, Yukiko Hara-Kudo
    Foodborne Pathogens and Disease.2022; 19(12): 823.     CrossRef
  • Psychroflexus curvus sp. nov., Psychroflexus longus sp. nov. and Psychroflexus montanilacus sp. nov., isolated from salt lakes on the Tibetan Plateau
    Huibin Lu, Peixin Gao, Dorji Phurbu, Qinglong Wu, Peng Xing
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Tumebacillus amylolyticus sp. nov., isolated from garden soil in Korea
    Minchung Kang, Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Yoonseop So, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Description of Polaribacter batillariae sp. nov., Polaribacter cellanae sp. nov., and Polaribacter pectinis sp. nov., novel bacteria isolated from the gut of three types of South Korean shellfish
    Su-Won Jeong, Jeong Eun Han, June-Young Lee, Ji-Ho Yoo, Do-Yeon Kim, In Chul Jeong, Jee-Won Choi, Yun-Seok Jeong, Jae-Yun Lee, So-Yeon Lee, Euon Jung Tak, Hojun Sung, Hyun Sik Kim, Pil Soo Kim, Dong-Wook Hyun, Jin-Woo Bae
    Journal of Microbiology.2022; 60(6): 576.     CrossRef
  • Survival strategy of comammox bacteria in a wastewater nutrient removal system with sludge fermentation liquid as additional carbon source
    Shaoyi Xu, Wenbo Chai, Rui Xiao, Barth F. Smets, Alejandro Palomo, Huijie Lu
    Science of The Total Environment.2022; 802: 149862.     CrossRef
  • Hymenobacter armeniacus sp. nov. and Hymenobacter montanus sp. nov., two radiation-resistant bacteria from soil
    Yuna Park, Yoonjee Chang, Myung Kyum Kim
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Hymenobacter telluris sp. nov., isolated from soil in South Korea
    Tuvshinzaya Damdintogtokh, Yuna Park, Soohyun Maeng, Hye Jin Oh, Minji Bang, Young Koung Lee, Jaesung Oh, Jaewoo Bai, Myung Kyum Kim
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Ferruginibacter albus sp. nov., isolated from a mountain soil, and Mucilaginibacter robiniae sp. nov., isolated from a black locust flower, Robinia pseudoacacia
    Miyoung Won, Hang-Yeon Weon, Jun Heo, Daseul Lee, Byeong-Hak Han, Seung-Beom Hong, Soon-Wo Kwon
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Beyond the ABCs—Discovery of Three New Plasmid Types in Rhodobacterales (RepQ, RepY, RepW)
    Heike M. Freese, Victoria Ringel, Jörg Overmann, Jörn Petersen
    Microorganisms.2022; 10(4): 738.     CrossRef
  • Comparative Genomic Analyses of the Genus Photobacterium Illuminate Biosynthetic Gene Clusters Associated with Antagonism
    Nyok-Sean Lau, Wooi Liang Heng, Noorizan Miswan, Nor Azura Azami, Go Furusawa
    International Journal of Molecular Sciences.2022; 23(17): 9712.     CrossRef
  • Comparative Genomic Analysis of Fusobacterium necrophorum Provides Insights into Conserved Virulence Genes
    Prabha K. Bista, Deepti Pillai, Chayan Roy, Joy Scaria, Sanjeev K. Narayanan, Philip N. Rather
    Microbiology Spectrum.2022;[Epub]     CrossRef
  • Shewanella sp. T2.3D-1.1 a Novel Microorganism Sustaining the Iron Cycle in the Deep Subsurface of the Iberian Pyrite Belt
    Guillermo Mateos, Adrián Martínez Bonilla, Sofía de Francisco de Polanco, José M. Martínez, Cristina Escudero, Nuria Rodríguez, Irene Sánchez-Andrea, Ricardo Amils
    Microorganisms.2022; 10(8): 1585.     CrossRef
  • Devosia rhizoryzae sp. nov., and Devosia oryziradicis sp. nov., novel plant growth promoting members of the genus Devosia, isolated from the rhizosphere of rice plants
    Geeta Chhetri, Inhyup Kim, Minchung Kang, Jiyoun Kim, Yoonseop So, Taegun Seo
    Journal of Microbiology.2022; 60(1): 1.     CrossRef
  • Nocardioides carbamazepini sp. nov., an ibuprofen degrader isolated from a biofilm bacterial community enriched on carbamazepine
    Tibor Benedek, Márton Pápai, Kholood Gharieb, Anna Bedics, András Táncsics, Erika Tóth, Hussein Daood, Gergely Maróti, Roland Wirth, Ofir Menashe, Károly Bóka, Balázs Kriszt
    Systematic and Applied Microbiology.2022; 45(4): 126339.     CrossRef
  • Agrilactobacillus fermenti sp. nov. isolated from fermented vegetable residue
    Shih-Yao Lin, Asif Hameed, Chia-Fang Tsai, Mei-Hua Hung, Chiu-Chung Young
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Genomic Insights into the Radiation-Resistant Capability of Sphingomonas qomolangmaensis S5-59T and Sphingomonas glaciei S8-45T, Two Novel Bacteria from the North Slope of Mount Everest
    Yang Liu, Xiaowen Cui, Ruiqi Yang, Yiyang Zhang, Yeteng Xu, Guangxiu Liu, Binglin Zhang, Jinxiu Wang, Xinyue Wang, Wei Zhang, Tuo Chen, Gaosen Zhang
    Microorganisms.2022; 10(10): 2037.     CrossRef
  • In silico, in vitro and in vivo characterization of host-associated Latilactobacillus curvatus strains for potential probiotic applications in farmed Atlantic salmon (Salmo salar)
    Hannah S. Cathers, Shrinivasrao P. Mane, Nilesh R. Tawari, Jayanth Balakuntla, Germán Plata, Madan Krishnamurthy, Alicia MacDonald, Marilyn Wolter, Niel Baxter, Julian Briones, Akshitha Nagireddy, Gregory Millman, Roberto E. Martin, Arvind Kumar, Dharanes
    Scientific Reports.2022;[Epub]     CrossRef
  • Rahnella sikkimica sp. nov., a novel cold-tolerant bacterium isolated from the glacier of Sikkim Himalaya with plant growth-promoting properties
    Anil Kumar, Anne Le Flèche-Matéos, Rakshak Kumar, Fabienne Lomprez, Frédéric Fichenick, Dharam Singh, Patrick A. D. Grimont, Sanjay Kumar
    Extremophiles.2022;[Epub]     CrossRef
  • Hydrogenophaga crocea sp. nov. associated with cyanobacterial mat isolated from farmland mud
    Vipool Thorat, Bhavesh Tiwarekar, Kiran Kirdat, Saurabhee Chavan, Shital Markad, Shivaji Sathe, Tushar Lodha, Amit Yadav
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Genome mining revealed polyhydroxybutyrate biosynthesis by Ramlibacter agri sp. nov., isolated from agriculture soil in Korea
    Ram Hari Dahal, Jungmin Kim, Dhiraj Kumar Chaudhary, Thi Tuyet Nhan Le, Dong-Uk Kim, Hyein Jang, Jaisoo Kim
    Antonie van Leeuwenhoek.2022; 115(5): 563.     CrossRef
  • Aestuarium zhoushanense is a later heterotypic synonym of Marivivens donghaensis, and transfer of Paradonghicola geojensis to the genus Marivivens as Marivivens geojensis comb. nov
    Luxuan Qu, Yating Li, Wanpeng Wang, Zongze Shao, Zheng Gao, Qiliang Lai
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Lysobacter chinensis sp. nov., a cellulose-degrading strain isolated from cow dung compost
    Yuyue Liu, Liuyan Zhou, Xinping Yang, Pengbin Li, Jinping Dai, Yuqing Xie, Xiaowu Wang, Zhifang Wang, Zhanqiang Su, Lei Feng
    Antonie van Leeuwenhoek.2022; 115(8): 1031.     CrossRef
  • Quadrisphaera setariae sp. nov., polyphosphate-accumulating bacterium occurring as tetrad or aggregate cocci and isolated from Setaria viridis
    Inhyup Kim, Geeta Chhetri, Jiyoun Kim, Yoonseop So, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Thauera sedimentorum sp. nov., Isolated from Coastal Sediment
    Jihye Baek, Nattira Jaikwang, Jong-Hwa Kim, Jung-Hoon Yoon, Jung-Sook Lee, Ampaitip Sukhoom, Wonyong Kim
    Current Microbiology.2022;[Epub]     CrossRef
  • Description of Deefgea piscis sp. nov., and Deefgea tanakiae sp. nov., isolated from the gut of Korean indigenous fish
    Do-Hun Gim, So-Yeon Lee, Jeong Eun Han, Jae-Yun Lee, Seo Min Kang, Jin-Woo Bae
    Journal of Microbiology.2022; 60(11): 1061.     CrossRef
  • Flavobacterium proteolyticum sp. nov., isolated from aquaculture water
    Juan Du, Yang Liu, Tao Pei, Anzhang Li, Ming-Rong Deng, Honghui Zhu
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Paracoccus everestensis sp. nov., a novel bacterium with great antioxidant capacity isolated from the north slope of Mount Everest
    Xiaowen Cui, Yang Liu, Yajie Xu, Tuo Chen, Songlin Zhang, Jinxiu Wang, Ruiqi Yang, Guangxiu Liu, Wei Zhang, Gaosen Zhang
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • [Retracted] Assembly of 97 Novel Bacterial Genomes in the Microbial Community Affiliated with Polyvinyl Alcohol in Soil of Northern China
    Jiaxing Liu, Xun Gu, Hui Li, Yu-Hang Zhang
    BioMed Research International.2022;[Epub]     CrossRef
  • Comparative Genomics Reveals Genetic Diversity and Metabolic Potentials of the Genus Qipengyuania and Suggests Fifteen Novel Species
    Yang Liu, Tao Pei, Juan Du, Qing Yao, Ming-Rong Deng, Honghui Zhu, Gaurav Sharma, Feng Cai, Xuewei Xu
    Microbiology Spectrum.2022;[Epub]     CrossRef
  • Sagittula salina sp. nov., isolated from marine waste
    Leila Satari, Esther Molina-Menor, Àngela Vidal-Verdú, Javier Pascual, Juli Peretó, Manuel Porcar
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Pseudophaeobacter flagellatus sp. nov., isolated from coastal water
    Yong Guan, Yue Jiang, Young-Min Kim, Seung Yeob Yu, Seung-Hyeon Choi, Hanna Choe, Zhun Li, Mi-Kyung Lee
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Thalassococcus arenae sp. nov. isolated from sea sand
    Veeraya Weerawongwiwat, Jong-Hwa Kim, Jung-Sook Lee, Jung-Hoon Yoon, Ampaitip Sukhoom, Wonyong Kim
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  • Microaerobic enrichment of benzene-degrading bacteria and description of Ideonella benzenivorans sp. nov., capable of degrading benzene, toluene and ethylbenzene under microaerobic conditions
    Anna Bedics, András Táncsics, Erika Tóth, Sinchan Banerjee, Péter Harkai, Balázs Kovács, Károly Bóka, Balázs Kriszt
    Antonie van Leeuwenhoek.2022; 115(9): 1113.     CrossRef
  • Hymenobacter lucidus sp. nov., and Hymenobacter nitidus sp. nov., isolated from soil
    Hyejin Oh, Hyang Burm Lee, Myung Kyum Kim
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  • Natronococcus pandeyae sp. nov., a Novel Haloarchaeon from Sambhar Salt Lake
    Swapnil Kajale, Neelima Deshpande, Tushar Lodha, Yogesh Shouche, Avinash Sharma
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  • Parachryseolinea silvisoli gen. nov., sp. nov., isolated from forest soil, and reclassification of Chryseolinea flava as Pseudochryseolinea flava gen. nov., comb. nov.
    Chunling Wang, Yingying Lv, Anzhang Li, Qing Yao, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Whole genome sequencing of the halophilic Halomonas qaidamensis XH36, a novel species strain with high ectoine production
    Tiantian Zhang, Tianqi Cui, Yaning Cao, Yongzhen Li, Fenghui Li, Derui Zhu, Jiangwa Xing
    Antonie van Leeuwenhoek.2022; 115(4): 545.     CrossRef
  • Draft Genome Sequence of Labrys okinawensis, Isolated from Acaciella sp. Nodules in Mexico
    Belén Chávez-Ramírez, Violeta Larios-Serrato, Paulina Estrada-de los Santos, Leighton Pritchard
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  • Sporosarcina jiandibaonis sp. nov., isolated from saline soil
    Delong Kong, Zhanfeng Xia, Yan Gao, Yiqing Zhou, Xu Jiang, Piao Xu, Wei Guo, Zhiyong Ruan
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Niabella agricola sp. nov., isolated from paddy soil
    Shih-Yao Lin, Chia-Fang Tsai, Asif Hameed, Tzung-Han Lee, Chiu-Chung Young
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  • Description of Corynebacterium poyangense sp. nov., isolated from the feces of the greater white-fronted geese (Anser albifrons)
    Qian Liu, Guoying Fan, Kui Wu, Xiangning Bai, Xi Yang, Wentao Song, Shengen Chen, Yanwen Xiong, Haiying Chen
    Journal of Microbiology.2022; 60(7): 668.     CrossRef
  • Paludisphaera rhizosphaereae sp. nov., a new member of the family Isosphaeraceae, isolated from the rhizosphere soil of Erianthus ravennae
    Khongsai L. Lhingjakim, Nandardhane Smita, Gaurav Kumar, Uppada Jagadeeshwari, Shabbir Ahamad, Chintalapati Sasikala, Chintalapati Venkata Ramana
    Antonie van Leeuwenhoek.2022; 115(8): 1073.     CrossRef
  • Fibrella aquatilis sp. nov., Fibrella rubiginis sp. nov. and Fibrella forsythiae sp. nov., isolated from freshwater, rusty iron and forsythia flower
    Heeyoung Kang, Haneul Kim, Seokhyeon Bae, Kiseong Joh
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Corallococcus silvisoli sp. nov., a novel myxobacterium isolated from subtropical forest soil
    Xian-Jiao Zhang, Guang-Da Feng, Yang Liu, Yang Zhou, Xiaoqin Deng, Qing Yao, Honghui Zhu
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  • Fundicoccus fermenti sp. nov., an indigo-reducing facultative anaerobic alkaliphile isolated from indigo fermentation liquor used for dyeing
    Zhihao Tu, Helena de Fátima Silva Lopes, Isao Yumoto
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Lignin-Oxidizing Vibrios Involved in the Mineralization of Plant Detritus in the Continental Slope
    Jianyang Li, Chunming Dong, Biswarup Sen, Qiliang Lai, Linfeng Gong, Guangyi Wang, Zongze Shao
    SSRN Electronic Journal .2022;[Epub]     CrossRef
  • Mapping Strengths and Weaknesses of Different Clustering Approaches to Deciphering Bacterial Chimerism
    David J. Burks, Rajeev K. Azad
    OMICS: A Journal of Integrative Biology.2022; 26(8): 422.     CrossRef
  • Unraveling Nitrogen, Sulfur, and Carbon Metabolic Pathways and Microbial Community Transcriptional Responses to Substrate Deprivation and Toxicity Stresses in a Bioreactor Mimicking Anoxic Brackish Coastal Sediment Conditions
    Paula Dalcin Martins, Maider J. Echeveste Medrano, Arslan Arshad, Julia M. Kurth, Heleen T. Ouboter, Huub J. M. Op den Camp, Mike S. M. Jetten, Cornelia U. Welte
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  • Rhizobium setariae sp. nov., an Indole-3-Acetic Acid-Producing Bacterium Isolated from Green Foxtail, Setaria viridis
    Minchung Kang, Taegun Seo
    Current Microbiology.2022;[Epub]     CrossRef
  • Description of Flavobacterium cyclinae sp. nov. and Flavobacterium channae sp. nov., isolated from the intestines of Cyclina sinensis (Corb shell) and Channa argus (Northern snakehead)
    Seomin Kang, Jae-Yun Lee, Jeong Eun Han, Yun-Seok Jeong, Do-Hun Gim, Jin-Woo Bae
    Journal of Microbiology.2022; 60(9): 890.     CrossRef
  • Paenibacillus arenosi sp. nov., a siderophore-producing bacterium isolated from coastal sediment
    Jihye Baek, Veeraya Weerawongwiwat, Jong-Hwa Kim, Jung-Hoon Yoon, Jung-Sook Lee, Ampaitip Sukhoom, Wonyong Kim
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  • Vagococcus allomyrinae sp. nov. and Enterococcus larvae sp. nov., isolated from larvae of Allomyrina dichotoma
    Sung-Min Kim, Yeong-Sik Byeon, Hong Lim Yang, In Seop Kim, Soon Dong Lee
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  • Staphylococcus ratti sp. nov. Isolated from a Lab Rat
    Vojtěch Kovařovic, Ivo Sedláček, Petr Petráš, Stanislava Králová, Ivana Mašlaňová, Pavel Švec, Meina Neumann-Schaal, Tibor Botka, Tereza Gelbíčová, Eva Staňková, Jiří Doškař, Roman Pantůček
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  • Mucilaginibacter rivuli sp. nov., isolated from a water rivulet
    Seokhyeon Bae, Heeyoung Kang, Haneul Kim, Kiseong Joh
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  • A Novel Alteromonas Phage Lineage with a Broad Host Range and Small Burst Size
    Yahui Yang, Ruijie Ma, Chen Yu, Junlei Ye, Xiaowei Chen, Long Wang, Nianzhi Jiao, Rui Zhang, Wei-Hua Chen
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  • Muricauda aurea sp. nov. and Muricauda profundi sp. nov., two marine bacteria isolated from deep sea sediment of Pacific Ocean
    Sufang Zhao, Renju Liu, Qiliang Lai, Zongze Shao
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  • Lysobacter ciconiae sp. nov., and Lysobacter avium sp. nov., isolated from the faeces of an Oriental stork
    So-Yeon Lee, Pil Soo Kim, Hojun Sung, Dong-Wook Hyun, Jin-Woo Bae
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  • Culturomics of Bacteria from Radon-Saturated Water of the World’s Oldest Radium Mine
    Gabriela Kapinusova, Kunal Jani, Tereza Smrhova, Petr Pajer, Irena Jarosova, Jachym Suman, Michal Strejcek, Ondrej Uhlik, Jing Han
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  • Pseudomonas germanica sp. nov., isolated from Iris germanica rhizomes
    Kostadin Evgeniev Atanasov, David Miñana Galbis, Julia Gallego, Annabel Serpico, Montserrat Bosch, Teresa Altabella, Albert Ferrer
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  • Cohnella herbarum sp. nov., isolated from wild grass fermentation broth
    Miyoung Won, Shin Ae Lee, Seung-Beom Hong, Byeong-Hak Han, Soon-Wo Kwon
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  • Description of Prasinibacter corallicola gen. nov., sp. nov., a zeaxanthin-producing bacterium isolated from stony coral Porites lutea
    Guanghua Wang, Jianfeng Liu, Yuanjin Li, Jin Li, Jixin Luo, Biao Chen, Zhiheng Liao, Hongfei Su, Jiayuan Liang, Kefu Yu
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  • Phylogenomic analysis of a metagenome-assembled genome indicates a new taxon of an anoxygenic phototroph bacterium in the family Chromatiaceae and the proposal of “Candidatus Thioaporhodococcus” gen. nov
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  • Mucilaginibacter aurantiaciroseus sp. nov. and Mucilaginibacter flavidus sp. nov., isolated from Renlongba glacier on the Tibetan Plateau
    Lei-Lei Yang, Yu Pang, Hong-Can Liu, Yu-Hua Xin, Qing Liu
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Aeromicrobium stalagmiti sp. nov., isolated from a lava cave
    Yeong-Sik Byeon, Sung-Min Kim, Hong Lim Yang, In Seop Kim, Soon Dong Lee
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  • Halorubrum salinarum sp. nov., an extremely halophilic archaeon isolated from a saturated brine pond of a saltern
    Ho Le Han, Reneelyn E. Danganan, Zhun Li, Na-Ri Shin, Reuel M. Bennett, Gina R. Dedeles, Song-Gun Kim
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  • Sulfuriroseicoccus oceanibius gen. nov., sp. nov., a representative of the phylum Verrucomicrobia with a special cytoplasmic membrane
    Xi Feng, Qi-Yun Liang, Qi-Hang Zou, Meng-Qi Ye, Zong-Jun Du
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  • Sediminibacillus dalangtanensis sp. nov., a moderate halophile isolated from hypersaline sediments of the Qaidam Basin in Northwest China
    Ting Huang, Qiliang Lai, Long Xiao, Linfeng Gong, Zongze Shao, Hongmei Wang, Yi Xu, Ricardo Amils, Cristina Escudero, José M. Martinez
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  • Croceicoccus hydrothermalis sp. nov., isolated from shallow-sea hydrothermal system off Kueishantao Island
    Beihan Chen, Youting Ye, Dan Lin, Mu Zhang, Jia Sun, Kai Tang
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  • Deciphering Genomes: Genetic Signatures of Plant-Associated Micromonospora
    Raúl Riesco, Maite Ortúzar, José Manuel Fernández-Ábalos, Martha E. Trujillo
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  • Erwinia phyllosphaerae sp. nov., a novel bacterium isolated from phyllosphere of pomelo (Citrus maxima)
    Ming-Kai Pan, Guang-Da Feng, Qing Yao, Jiali Li, Chenjian Liu, Honghui Zhu
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  • Capillimicrobium parvum gen. nov., sp. nov., a novel representative of Capillimicrobiaceae fam. nov. within the order Solirubrobacterales, isolated from a grassland soil
    Selma Vieira, Katharina J. Huber, Alicia Geppert, Jacqueline Wolf, Meina Neumann-Schaal, Manja Luckner, Gerhard Wanner, Mathias Müsken, Jörg Overmann
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  • Salegentibacter lacus sp. nov. and Salegentibacter tibetensis sp. nov., isolated from hypersaline lakes on the Tibetan Plateau
    Huibin Lu, Peixin Gao, Dorji Phurbu, Qinglong L. Wu, Peng Xing
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  • Sphingomonas cannabina sp. nov., isolated from Cannabis sativa L. ‘Cheungsam’
    Doeun Jeon, Lingmin Jiang, Yuxin Peng, Jiyoon Seo, Zhun Li, Seung-Hwan Park, Rae-Dong Jeong, Soon Ju Park, Jae Cheol Jeong, Jiyoung Lee
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  • Ideonella alba sp. nov. and Ideonella aquatica sp. nov. isolated from an aquaculture farm
    Juan Du, Yang Liu, Tao Pei, Honghui Zhu
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  • Gottfriedia endophyticus sp. nov., a novel indole-acetic acid producing bacterium isolated from the roots of rice plant
    Geeta Chhetri, Inhyup Kim, Taegun Seo
    Antonie van Leeuwenhoek.2022; 115(7): 943.     CrossRef
  • Gut microbiome of the largest living rodent harbors unprecedented enzymatic systems to degrade plant polysaccharides
    Lucelia Cabral, Gabriela F. Persinoti, Douglas A. A. Paixão, Marcele P. Martins, Mariana A. B. Morais, Mariana Chinaglia, Mariane N. Domingues, Mauricio L. Sforca, Renan A. S. Pirolla, Wesley C. Generoso, Clelton A. Santos, Lucas F. Maciel, Nicolas Terrap
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  • Aggregatimonas sangjinii gen. nov., sp. nov., a novel silver nanoparticle synthesizing bacterium belonging to the family Flavobacteriaceae
    Dawoon Chung, Jaejoon Jung, Jaoon Young Hwan Kim, Kyung Woo Kim, Yong Min Kwon
    Antonie van Leeuwenhoek.2022; 115(2): 325.     CrossRef
  • Comparative genomic analyses of four novel Ramlibacter species and the cellulose-degrading properties of Ramlibacter cellulosilyticus sp. nov.
    Minchung Kang, Geeta Chhetri, Inhyup Kim, Yoonseop So, Taegun Seo
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  • Cellulosimicrobium protaetiae sp. nov., isolated from the gut of the larva of Protaetia brevitarsis seulensis
    Ho Le Han, Tra T. H. Nguyen, Zhun Li, Na-Ri Shin, Song-Gun Kim
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  • Prokaryotes of renowned Karlovy Vary (Carlsbad) thermal springs: phylogenetic and cultivation analysis
    Tereza Smrhova, Kunal Jani, Petr Pajer, Gabriela Kapinusova, Tomas Vylita, Jachym Suman, Michal Strejcek, Ondrej Uhlik
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  • Draft Genome Sequences of the Kocuria subflava Type Strain KCTC 39547 and Kocuria sp. Strain JC486, a Newly Isolated Strain from a Wild Ass Sanctuary in Gujarat, India
    Jagadeeshwari Uppada, Sasikala Chintalapati, Karthika K, Venkata Ramana Chintapati, J. Cameron Thrash
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  • Cellulomonas fulva sp. nov., isolated from oil-contaminated soil
    Ram Hari Dahal, Jungmin Kim, Dong-Uk Kim, Ke Dong, Yongseok Hong, Dhiraj Kumar Chaudhary
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  • Hymenobacter piscis sp. nov., isolated from a fish pond
    Shih-Yi Sheu, Che-Chia Yang, Soon-Wo Kwon, Wen-Ming Chen
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  • Corynebacterium uberis sp. nov. frequently isolated from bovine mastitis
    Sonja Kittl, Eveline Studer, Isabelle Brodard, Andreas Thomann, Jörg Jores
    Systematic and Applied Microbiology.2022; 45(4): 126325.     CrossRef
  • Spiractinospora alimapuensis gen. nov., sp. nov., isolated from marine sediment of Valparaíso Bay (Chile) and proposal for reclassification of two species of the genus Nocardiopsis
    Fernanda P. Claverías, Néstor Serna-Cardona, Andrés Cumsille, Leonardo Zamora-Leiva, Raúl Riesco, Eduardo Couve, Martha E. Trujillo, Beatriz Cámara
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Microvirga splendida sp. nov., bacteria isolated from soil
    Yuna Park, Soohyun Maeng, Tuvshinzaya Damdintogtokh, Hyejin Oh, Minji Bang, Jaewoo Bai, Myung Kyum Kim
    Antonie van Leeuwenhoek.2022; 115(6): 741.     CrossRef
  • Genome analysis of Pseudomonas species reveals that Pseudomonas panacis Park et al. 2005 is a later heterotypic synonym of Pseudomonas marginalis (Brown 1918) Stevens 1925 (Approved Lists 1980)
    Ritu Rani Archana Kujur, Sushanta Deb, Subrata K. Das
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Halomonas antri sp. nov., a carotenoid-producing bacterium isolated from surface seawater
    Yoonseop So, Geeta Chhetri, Inhyup Kim, Minchung Kang, Jiyoun Kim, Byungjo Lee, Wonhee Jang, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Parvicella tangerina gen. nov., sp. nov. (Parvicellaceae fam. nov., Flavobacteriales), first cultured representative of the marine clade UBA10066, and Lysobacter luteus sp. nov., from activated sludge of a seawater-processing wastewater treat
    Teresa Lucena, Olga Sánchez, Isabel Sanz-Saez, Silvia G. Acinas, Laura Garrido, Jordi Mas, M. Carmen Macián, María A. Ruvira, David R. Arahal, María J. Pujalte
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  • Sphingomonas folii sp. nov., Sphingomonas citri sp. nov. and Sphingomonas citricola sp. nov., isolated from citrus phyllosphere
    Guang-Da Feng, Jiali Li, Mingkai Pan, Xiaoqin Deng, Meng Chen, Qing Yao, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Frequent Occurrence and Metabolic Versatility of Marinifilaceae Bacteria as Key Players in Organic Matter Mineralization in Global Deep Seas
    Jianyang Li, Chunming Dong, Qiliang Lai, Guangyi Wang, Zongze Shao, Thomas J. Sharpton
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  • Tenebrionicola larvae gen. nov., sp. nov., isolated from larvae of mealworm Tenebrio molitor L., and a proposal to transfer Erwinia teleogrylli Liu et al. 2016 to a new genus Entomohabitans as Entomohabitans teleogrylli comb. nov.
    Soon Dong Lee, Seong-Min Kim, Yeong-Sik Byeon, Hong Lim Yang, Soo Hong Chang, In Seop Kim
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  • Sessilibacter corallicola gen. nov., sp. nov., a sessile bacterium isolated from coral Porites lutea
    Jianfeng Liu, Jin Li, Jixin Luo, Yuanjin Li, Zian Yang, Chengli Huang, Feilong Sun, Guanghua Wang
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Moraxella tetraodonis sp. nov., isolated from freshwater pufferfish (Tetraodon cutcutia) skin
    Lipika Das, Subrata K. Das
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  • Sulfurimonas marina sp. nov., an obligately chemolithoautotrophic, sulphur-oxidizing bacterium isolated from a deep-sea sediment sample from the South China Sea
    Zhaodi Wang, Shasha Wang, Qiliang Lai, Shiping Wei, Lijing Jiang, Zongze Shao
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  • Genome-based reclassification of Azospirillum brasilense Az39 as the type strain of Azospirillum argentinense sp. nov.
    Natália dos Santos Ferreira, Anahí Coniglio, Mariana Puente, Fernando Hayashi Sant’Anna, Guillermo Maroniche, Julia García, Romina Molina, Sofia Nievas, Camila Gazolla Volpiano, Adriana Ambrosini, Luciane M. P. Passaglia, Raul O. Pedraza, Verônica Massena
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  • Genome-based, phenotypic and chemotaxonomic classification of Faecalibacterium strains: proposal of three novel species Faecalibacterium duncaniae sp. nov., Faecalibacterium hattorii sp. nov. and Faecalibacterium gallinarum sp. nov.
    Mitsuo Sakamoto, Naomi Sakurai, Hiroki Tanno, Takao Iino, Moriya Ohkuma, Akihito Endo
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  • Bradyrhizobium altum sp. nov., Bradyrhizobium oropedii sp. nov. and Bradyrhizobium acaciae sp. nov. from South Africa show locally restricted and pantropical nodA phylogeographic patterns
    Juanita R. Avontuur, Marike Palmer, Chrizelle W. Beukes, Wai Y. Chan, Taponeswa Tasiya, Elritha van Zyl, Martin P.A. Coetzee, Tomasz Stepkowski, Stephanus N. Venter, Emma T. Steenkamp
    Molecular Phylogenetics and Evolution.2022; 167: 107338.     CrossRef
  • Azospirillum tabaci sp. nov., a bacterium isolated from rhizosphere soil of Nicotiana tabacum L
    Yan-Qing Duan, Xing-Kui Zhou, Neeli Habib, Shi-Qiang Gao, Li-Min Dong, Xiao-Fei Liu, Yang-Mei Shi, Wen-Jun Li, Gang Du
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  • Cecal Microbial Hydrogen Cycling Potential Is Linked to Feed Efficiency Phenotypes in Chickens
    Gustavo Antonio Ramírez, Jitendra Keshri, Isabella Vahrson, Arkadiy I. Garber, Mark E. Berrang, Nelson A. Cox, Fernando González-Cerón, Samuel E. Aggrey, Brian B. Oakley
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  • Enterococcus alishanensis sp. nov., a novel lactic acid bacterium isolated from fresh coffee beans
    Jen-hao Chung, Misa Otoguro, Fujitoshi Yanagida, Hui-chung Wu, Yu-chung Chang, Yun-Shien Lee, Yi-sheng Chen
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  • Comparative Genomics of the Genus Pseudomonas Reveals Host- and Environment-Specific Evolution
    Zaki Saati-Santamaría, Riccardo Baroncelli, Raúl Rivas, Paula García-Fraile, Olaya Rendueles Garcia
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  • Croceicoccus gelatinilyticus sp. nov., isolated from a tidal flat sediment
    Tao Pei, Yang Liu, Juan Du, Kunpeng Huang, Ming-Rong Deng, Honghui Zhu
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  • Shewanella jiangmenensis sp. nov., isolated from aquaculture water
    Yingli Song, Anzhang Li, Shuaishuai Xu, Mingxia Zhang, Qing Yao, Lian Ma, Honghui Zhu
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  • Mesonia aestuariivivens sp. nov., isolated from a tidal flat
    Sooyeon Park, Jung-Sook Lee, Wonyong Kim, Jung-Hoon Yoon
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  • Chryseobacterium tagetis sp. nov., a plant growth promoting bacterium with an antimicrobial activity isolated from the roots of medicinal plant (Tagetes patula)
    Geeta Chhetri, Inhyup Kim, Jiyoun Kim, Yoonseop So, Taegun Seo
    The Journal of Antibiotics.2022; 75(6): 312.     CrossRef
  • Description ofPseudogemmobacter faecipullorumsp. nov., isolated from poultry manure
    Shih-Yao Lin, Asif Hameed, Chia-Fang Tsai, Yu-Shan Tang, Chiu-Chung Young
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  • Acetylenotrophic and Diazotrophic Bradyrhizobium sp. Strain I71 from TCE-Contaminated Soils
    Denise M. Akob, John M. Sutton, Timothy J. Bushman, Shaun M. Baesman, Edina Klein, Yesha Shrestha, Robert Andrews, Janna L. Fierst, Max Kolton, Sara Gushgari-Doyle, Ronald S. Oremland, John L. Freeman, Jeremy D. Semrau
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  • Definition of the Metagenomic Profile of Ocean Water Samples From the Gulf of Mexico Based on Comparison With Reference Samples From Sites Worldwide
    Antonio Loza, Fernando García-Guevara, Lorenzo Segovia, Alejandra Escobar-Zepeda, Maria del Carmen Sanchez-Olmos, Enrique Merino, Alejandro Sanchez-Flores, Liliana Pardo-Lopez, Katy Juarez, Rosa-Maria Gutierrez-Rios
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  • Marinobacterium arenosum sp. nov., isolated from a coastal sand
    Yunjeong Lee, Veeraya Weerawongwiwat, Jong-Hwa Kim, Jung-Hoon Yoon, Jung-Sook Lee, Ampaitip Sukhoom, Wonyong Kim
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  • Nocardioides palaemonis sp. nov. and Tessaracoccus palaemonis sp. nov., isolated from the gastrointestinal tract of lake prawn
    Do-Yeon Kim, In-Chul Jeong, So-Yeon Lee, Yun-Seok Jeong, Jeong Eun Han, Euon Jung Tak, June-Young Lee, Pil Soo Kim, Dong-Wook Hyun, Jin-Woo Bae
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  • Genomic characterization and production of antimicrobial lipopeptides by Bacillus velezensis P45 growing on feather by-products
    Carolini Esmeriz da Rosa, Cristian Mauricio Barreto Pinilla, Paolo Stincone, Jamile Queiroz Pereira, Ana Paula Muterle Varela, Fabiana Quoos Mayer, Adriano Brandelli
    Journal of Applied Microbiology.2022; 132(3): 2067.     CrossRef
  • Subtercola endophyticus sp. nov., a cold-adapted bacterium isolated from Abies koreana
    Lingmin Jiang, Yuxin Peng, Jiyoon Seo, Doeun Jeon, Mi Gyeong Jo, Ju Huck Lee, Jae Cheol Jeong, Cha Young Kim, Hyeong Cheol Park, Jiyoung Lee
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  • Type IV pili trigger episymbiotic association of Saccharibacteria with its bacterial host
    Bingliang Xie, Jian Wang, Yong Nie, Jing Tian, Zerui Wang, Dongwei Chen, Beiyu Hu, Xiao-Lei Wu, Wenbin Du
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  • Gymnodinialimonas ceratoperidinii gen. nov., sp. nov., isolated from rare marine dinoflagellate Ceratoperidinium margalefii
    Yue Jiang, Yuxin Peng, Hyeon Ho Shin, Hyun Jung Kim, Ki-Hyun Kim, Lingmin Jiang, Jiyoung Lee, Zhun Li
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  • Pufferfish (Tetraodon cutcutia) Sampled from a Freshwater River Serves as an Intermediate Reservoir of a Sucrose Nonfermenting Variant of Vibrio cholerae PS-4
    Lipika Das, Sushanta Deb, Eiji Arakawa, Shinji Yamasaki, Subrata K. Das, Courtney J. Robinson
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  • Deinococcus betulae sp. nov. and Deinococcus arboris sp. nov., novel bacteria isolated from bark of birch tree (Betula platyphylla)
    Seokhyeon Bae, Heeyoung Kang, Haneul Kim, Kiseong Joh
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Hi-C deconvolution of a textile dye–related microbiome reveals novel taxonomic landscapes and links phenotypic potential to individual genomes
    Ayixon Sánchez-Reyes, Luz Bretón-Deval, Hayley Mangelson, Ilse Salinas-Peralta, Alejandro Sanchez-Flores
    International Microbiology.2022; 25(1): 99.     CrossRef
  • Thermal Endurance by a Hot-Spring-Dwelling Phylogenetic Relative of the Mesophilic Paracoccus
    Nibendu Mondal, Chayan Roy, Sumit Chatterjee, Jagannath Sarkar, Subhajit Dutta, Sabyasachi Bhattacharya, Ranadhir Chakraborty, Wriddhiman Ghosh, Jeffrey A. Gralnick
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  • Microbiota of the Pregnant Mouse: Characterization of the Bacterial Communities in the Oral Cavity, Lung, Intestine, and Vagina through Culture and DNA Sequencing
    Jonathan M. Greenberg, Roberto Romero, Andrew D. Winters, Jose Galaz, Valeria Garcia-Flores, Marcia Arenas-Hernandez, Jonathan Panzer, Zachary Shaffer, David J. Kracht, Nardhy Gomez-Lopez, Kevin R. Theis, Jennifer M. Auchtung
    Microbiology Spectrum.2022;[Epub]     CrossRef
  • Sphingomonas radiodurans sp. nov., a novel radiation-resistant bacterium isolated from the north slope of Mount Everest
    Yang Liu, Tuo Chen, Xiaowen Cui, Yeteng Xu, Shixin Hu, Yidan Zhao, Wei Zhang, Guangxiu Liu, Gaosen Zhang
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Enterovibrio paralichthyis sp. nov., isolated from the gut of an olive flounder Paralichthys olivaceus
    Young-Ok Kim, In-Suk Park, Dong-Gyun Kim, Sooyeon Park, Sung Hoon Han, Jung-Hoon Yoon
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Deep Learning Encoding for Rapid Sequence Identification on Microbiome Data
    Jacob Borgman, Karen Stark, Jeremy Carson, Loren Hauser
    Frontiers in Bioinformatics.2022;[Epub]     CrossRef
  • Arthrobacter wenxiniae sp. nov., a novel plant growth-promoting rhizobacteria species harbouring a carotenoids biosynthetic gene cluster
    Yu-chen Sun, Pengbo Sun, Jing Xue, Yunpeng Du, Hui Yan, Li-wei Wang, Xin-xin Yi, Jian-guang Sun, Xiuhai Zhang, Jun-lian Gao
    Antonie van Leeuwenhoek.2022; 115(3): 353.     CrossRef
  • Microvirga terricola sp. nov. and Microvirga solisilvae sp. nov, isolated from forest soil
    Xianjiao Zhang, Guang-Da Feng, Xiangling Zhen, Yulian Zhang, Xiaoqin Deng, Honghui Zhu, Qing Yao
    Archives of Microbiology.2022;[Epub]     CrossRef
  • Pararoseburia lenta gen. nov., sp. nov. isolated from human faeces
    Rashidin Abdugheni, Yu-Jing Wang, Dan-Hua Li, Meng-Xuan Du, Chang Liu, Nan Zhou, Shuang-Jiang Liu
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Six novel Micromonospora species associated with the phyllosphere and roots of leguminous plants: Micromonospora alfalfae sp. nov., Micromonospora cabrerizensis sp. nov., Micromonospora foliorum sp. nov., Micromonospora hortensis sp. nov., Micromonospora
    Raúl Riesco, Maite Ortúzar, Brenda Román-Ponce, Fernando Sánchez-Juanes, José Mariano Igual, Martha E. Trujillo
    International Journal of Systematic and Evolutionary Microbiology .2022;[Epub]     CrossRef
  • Rothia santali sp. nov., endophytic bacteria isolated from sandalwood (Santalum album L.) seedling
    Ngangyola Tuikhar, Kiran Kirdat, Gayatri Nair, S. Padma, Vipool Thorat, P. Swetha, Shivaji Sathe, R. Sundararaj, Amit Yadav
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  • Rhodococcus spelaei sp. nov., isolated from a cave, and proposals that Rhodococcus biphenylivorans is a later synonym of Rhodococcus pyridinivorans, Rhodococcus qingshengii and Rhodococcus baikonurensis are later synonyms of Rhodococcus eryth
    Soon Dong Lee, In Seop Kim
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Sweet spheres: succession and CAZyme expression of marine bacterial communities colonizing a mix of alginate and pectin particles
    Carina Bunse, Hanna Koch, Sven Breider, Meinhard Simon, Matthias Wietz
    Environmental Microbiology.2021; 23(6): 3130.     CrossRef
  • Pareuzebyella sediminis gen. nov., sp. nov., a novel marine bacterium in the family Flavobacteriaceae, isolated from a tidal flat sediment
    Zhaobin Huang, Xiaomei Wei, Qiliang Lai, Shiyong Chen, Jianjun Yuan
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Description of Devosia faecipullorum sp. nov., harboring antibiotic- and toxic compound-resistant genes, isolated from poultry manure
    Shih-Yao Lin, Chia-Fang Tsai, Asif Hameed, Yu-Shan Tang, Chiu-Chung Young
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Description of Nocardioides piscis sp. nov., Sphingomonas piscis sp. nov. and Sphingomonas sinipercae sp. nov., isolated from the intestine of fish species Odontobutis interrupta (Korean spotted sleeper) and Siniperca scherzeri (leopard mandarin fish)
    Dong-Wook Hyun, Yun-Seok Jeong, Jae-Yun Lee, Hojun Sung, So-Yeon Lee, Jee-Won Choi, Hyun Sik Kim, Pil Soo Kim, Jin-Woo Bae
    Journal of Microbiology.2021; 59(6): 552.     CrossRef
  • Pseudomonas schmalbachii sp. nov., isolated from the gut of a millipede (Trigoniulus corallinus) from a coconut tree
    Matan Shelomi, Wen-Ming Chen, Hsin-Kuang Chen, Hsin-Ying Lee, Chiu-Chung Young, Shih-Yao Lin, Shwu-Jen Liaw
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Fuscibacter oryzae gen. nov., sp. nov., a phosphate-solubilizing bacterium isolated from the rhizosphere of rice plant
    Geeta Chhetri, Minchung Kang, Jiyoun Kim, Inhyup Kim, Yoonseop So, Taegun Seo
    Antonie van Leeuwenhoek.2021; 114(9): 1453.     CrossRef
  • Genome insight and description of antibiotic producing Massilia antibiotica sp. nov., isolated from oil-contaminated soil
    Ram Hari Dahal, Dhiraj Kumar Chaudhary, Jaisoo Kim
    Scientific Reports.2021;[Epub]     CrossRef
  • Maritimibacter harenae sp. nov. and Sneathiella litorea sp. nov.: members of Alphaproteobacteria isolated from sea sand
    Shehzad Abid Khan, Hye Su Jung, Hye Yoon Park, Che Ok Jeon
    Antonie van Leeuwenhoek.2021; 114(6): 799.     CrossRef
  • Palleronia sediminis sp. nov. and Flavivirga algicola sp. nov., two marine bacteria isolated from offshore areas near Weihai
    Xun-Ke Sun, Ya-Ning Zhang, Yu-Yao Jia, Yan-Lin Zhong, Guan-Jun Chen, Zong-Jun Du
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Paenarthrobacter sp. GOM3 Is a Novel Marine Species With Monoaromatic Degradation Relevance
    Jaime Rosas-Díaz, Alejandra Escobar-Zepeda, Libertad Adaya, Jorge Rojas-Vargas, Diego Humberto Cuervo-Amaya, Ayixon Sánchez-Reyes, Liliana Pardo-López
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  • Pseudidiomarina piscicola sp. nov., isolated from cultured European seabass, Dicenthrarchus labrax
    M. Carmen Macián, Teresa Lucena, David R. Arahal, María A. Ruvira, Rosa Aznar, María J. Pujalte
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  • Pseudoprevotella muciniphila gen. nov., sp. nov., a mucin-degrading bacterium attached to the bovine rumen epithelium
    Sang Weon Na, Byung Hee Chun, Seok-Hyeon Beak, Shehzad Abid Khan, Md. Najmul Haque, Jae Sung Lee, Che Ok Jeon, Sang-Suk Lee, Myunggi Baik, Pankaj Kumar Arora
    PLOS ONE.2021; 16(5): e0251791.     CrossRef
  • Nocardioides baculatus sp. nov., a novel actinomycete isolated from the rhizosphere of Tagetes patula
    Geeta Chhetri, Inhyup Kim, Minchung Kang, Jiyoun Kim, Yoonseop So, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Phylogenomic Analyses of a Clade Within the Family Flavobacteriaceae Suggest Taxonomic Reassignments of Species of the Genera Algibacter, Hyunsoonleella, Jejuia, and Flavivirga, and the Proposal of Pseudalgibacter gen. nov. and Pseudalgibacter alginicilyt
    Miao Li, Ling-Zhi Hou, Xing-Hao Xu, Xiao-Xiao Wang, Ming-Can Zheng, Yan-Jiao Zhang, Ang Liu
    Current Microbiology.2021; 78(8): 3277.     CrossRef
  • Description of antibiotic-producing novel bacteria Paraburkholderia antibiotica sp. nov. and Paraburkholderia polaris sp. nov.
    Ram Hari Dahal, Jungmin Kim, Dhiraj Kumar Chaudhary, Dong-Uk Kim, Jaisoo Kim
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Thiomicrorhabdus sediminis sp. nov. and Thiomicrorhabdus xiamenensis sp. nov., novel sulfur-oxidizing bacteria isolated from coastal sediments and an emended description of the genus Thiomicrorhabdus
    Xuewen Liu, Baoping Chen, Qiliang Lai, Zongze Shao, Lijing Jiang
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Sanguibacter suaedae sp. nov., isolated from the root of Suaeda aralocaspica in north-west PR China
    Qin Ma, Rui-Feng Lei, Yu-Qian Li, Dilireba Abudourousuli, Zulihumaer Rouzi, Muyesaier Aosiman, Fang Liu, Yang-Yang Liu, Deng-Di An, Wen-Jun Li
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Algibacillus agarilyticus gen. nov., sp. nov., isolated from the surface of the red algae Gelidium amansii
    Xue Meng, Ya-Qi Chang, Huan Wang, Zong-Jun Du
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • 'Candidatus Phytoplasma sacchari’, a novel taxon - associated with Sugarcane Grassy Shoot (SCGS) disease
    Kiran Kirdat, Bhavesh Tiwarekar, Vipool Thorat, Shivaji Sathe, Yogesh Shouche, Amit Yadav
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Bruguierivorax albus gen. nov. sp. nov. Isolated from Mangrove Sediment and Proposal of Bruguierivoracaceae fam. nov
    Mi Li, Kai Liu, Yonghong Liu, Chenghai Gao, Xiangxi Yi
    Current Microbiology.2021; 78(2): 856.     CrossRef
  • Uliginosibacterium aquaticum sp. nov., Isolated from a Freshwater Lake
    Jaeho Song, Mirae Kim, Miri S. Park, Yochan Joung, Ilnam Kang, Jang-Cheon Cho
    Current Microbiology.2021; 78(9): 3381.     CrossRef
  • Nonlabens ponticola sp. nov., isolated from seawater and reclassification of Nonlabens sediminis as a later heterotypic synonym of Nonlabens tegetincola
    Ye Lin Seo, Jaejoon Jung, Chi-une Song, Yong Min Kwon, Hye Su Jung, Seong-il Eyun, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Thermosipho ferrireducens sp.nov., an anaerobic thermophilic iron(III)-reducing bacterium isolated from a deep-sea hydrothermal sulfide deposits
    Yao Chen, Yang He, Zongze Shao, Xiqiu Han, Danling Chen, Jian Yang, Xiang Zeng
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Peteryoungia gen. nov. with four new species combinations and description of Peteryoungia desertarenae sp. nov., and taxonomic revision of the genus Ciceribacter based on phylogenomics of Rhizobiaceae
    Praveen Rahi, Mitesh Khairnar, Ashwini Hagir, Avinash Narayan, Kunal R. Jain, Datta Madamwar, Aabeejjeet Pansare, Yogesh Shouche
    Archives of Microbiology.2021; 203(6): 3591.     CrossRef
  • Brevilactibacter coleopterorum sp. nov., isolated from the intestine of the dark diving beetle Hydrophilus acuminatus, and Weissella coleopterorum sp. nov., isolated from the intestine of the diving beetle Cybister lewisianus
    Dong-Wook Hyun, June-Young Lee, Hojun Sung, Pil Soo Kim, Yun-Seok Jeong, Jae-Yun Lee, Ji-Hyun Yun, Jee-Won Choi, Jeong Eun Han, So-Yeon Lee, Euon Jung Tak, Hyun Sik Kim, Jin-Woo Bae
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Crassaminicella thermophila sp. nov., a moderately thermophilic bacterium isolated from a deep-sea hydrothermal vent chimney and emended description of the genus Crassaminicella
    Xue-Gong Li, Jin Lin, Shi-Jie Bai, Jie Dai, Ze-Xi Jiao, Hong-Zhi Tang, Xiao-Qing Qi, Wei-Jia Zhang, Min Liu, Jian-Sheng Xu, Long-Fei Wu
    International Journal of Systematic and Evolutionary Microbiology.2021;[Epub]     CrossRef
  • Isoptericola sediminis sp. nov., Isolated from Chilika Lagoon
    Dhanesh Kumar, Jagadeeshwari U., Krishnaiah A., Suresh G., Ch. Sasikala, Ch. Venkata Ramana
    Current Microbiology.2021; 78(2): 848.     CrossRef
  • “Candidatus Laterigemmans baculatus” gen. nov. sp. nov., the first representative of rod shaped planctomycetes with lateral budding in the family Pirellulaceae
    Dhanesh Kumar, Gaurav Kumar, Uppada Jagadeeshwari, Chintalapati Sasikala, Chintalapati Venkata Ramana
    Systematic and Applied Microbiology.2021; 44(2): 126188.     CrossRef
  • Rahnella laticis sp. nov. and Rahnella contaminans sp. nov., and emended description of the genus Rahnella
    Dabin Jeon, In Seop Kim, Soon Dong Lee
    International Journal of Systematic and Evolutionary Microbiology.2021;[Epub]     CrossRef
  • Proposal of Thermoactinomyces mirandus sp. nov., a filamentous, anaerobic bacterium isolated from a biogas plant
    Mira Mutschlechner, Nina Lackner, Rudolf Markt, Willi Salvenmoser, Christopher A. Dunlap, Andreas O. Wagner
    Antonie van Leeuwenhoek.2021; 114(1): 45.     CrossRef
  • Enrichment and physiological characterization of a novel comammox Nitrospira indicates ammonium inhibition of complete nitrification
    Dimitra Sakoula, Hanna Koch, Jeroen Frank, Mike S M Jetten, Maartje A H J van Kessel, Sebastian Lücker
    The ISME Journal.2021; 15(4): 1010.     CrossRef
  • Pontixanthobacter rizhaonensis sp. nov., a marine bacterium isolated from surface seawater of the Yellow Sea, and proposal of Pseudopontixanthobacter gen. nov., Pseudopontixanthobacter confluentis comb. nov. and Pseudopontixanthobacter sedimi
    Ang Liu, Qing-Jie Xue, Shi-Gen Li, Yan-Jiao Zhang
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Burkholderia species in human infections in Mexico: Identification of B. cepacia, B. contaminans, B. multivorans, B. vietnamiensis,B. pseudomallei and a new Burkholderia species
    Georgina Meza-Radilla, Violeta Larios-Serrato, Rigoberto Hernández-Castro, J. Antonio Ibarra, Paulina Estrada-de los Santos, Yunn-Hwen Gan
    PLOS Neglected Tropical Diseases.2021; 15(6): e0009541.     CrossRef
  • Chryseobacterium caseinilyticum sp. nov., a casein hydrolyzing bacterium isolated from rice plant and emended description of Chryseobacterium piscicola
    Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Minchung Kang, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Genome-Based Taxonomic Rearrangement of the Order Geobacterales Including the Description of Geomonas azotofigens sp. nov. and Geomonas diazotrophica sp. nov.
    Zhenxing Xu, Yoko Masuda, Xueding Wang, Natsumi Ushijima, Yutaka Shiratori, Keishi Senoo, Hideomi Itoh
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  • Description of Ornithinimicrobium ciconiae sp. nov., and Ornithinimicrobium avium sp. nov., isolated from the faeces of the endangered and near-threatened birds
    So-Yeon Lee, Hojun Sung, Pil Soo Kim, Hyun Sik Kim, Jae-Yun Lee, June-Young Lee, Yun-Seok Jeong, Euon Jung Tak, Jeong Eun Han, Dong-Wook Hyun, Jin-Woo Bae
    Journal of Microbiology.2021; 59(11): 978.     CrossRef
  • CAZymes in Maribacter dokdonensis 62–1 From the Patagonian Shelf: Genomics and Physiology Compared to Related Flavobacteria and a Co-occurring Alteromonas Strain
    Laura A. Wolter, Maximilian Mitulla, Jovan Kalem, Rolf Daniel, Meinhard Simon, Matthias Wietz
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  • Gephyromycinifex aptenodytis gen. nov., sp. nov., isolated from gut of Antarctic emperor penguin Aptenodytes forsteri
    Wen-Zhuo Zhu, Ya-Ming Ge, Hui-Min Gao, Jun Dai, Xiao-Ling Zhang, Qiao Yang
    Antonie van Leeuwenhoek.2021; 114(12): 2003.     CrossRef
  • Roseibium litorale sp. nov., isolated from a tidal flat sediment and proposal for the reclassification of Labrenzia polysiphoniae as Roseibium polysiphoniae comb. nov.
    Yang Liu, Tao Pei, Juan Du, Meijie Chao, Ming-Rong Deng, Honghui Zhu
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  • Enrichment of novel Verrucomicrobia, Bacteroidetes, and Krumholzibacteria in an oxygen‐limited methane‐ and iron‐fed bioreactor inoculated with Bothnian Sea sediments
    Paula Dalcin Martins, Anniek de Jong, Wytze K. Lenstra, Niels A. G. M. van Helmond, Caroline P. Slomp, Mike S. M. Jetten, Cornelia U. Welte, Olivia Rasigraf
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  • Description of Acinetobacter kanungonis sp. nov., based on phylogenomic analysis
    Lipika Das, Sushanta Deb, Subrata K. Das
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Inhella proteolytica sp. nov. and Inhella gelatinilytica sp. nov., two novel species of the genus Inhella isolated from aquaculture water
    Yang Liu, Tao Pei, Juan Du, Ming-Rong Deng, Honghui Zhu
    Archives of Microbiology.2021; 203(6): 3191.     CrossRef
  • Variimorphobacter saccharofermentans gen. nov., sp. nov., a new member of the family Lachnospiraceae, isolated from a maize-fed biogas fermenter
    Regina Rettenmaier, Nils Thieme, Johanna Streubel, Luca Di Bello, Marie-Louise Kowollik, Liren Huang, Irena Maus, Andreas Klingl, Wolfgang Liebl, Vladimir V. Zverlov
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Crateriforma spongiae sp. nov., isolated from a marine sponge and emended description of the genus “Crateriforma”
    Gaurav Kumar, Dhanesh Kumar, U. Jagadeeshwari, P. K. Sreya, A. Shabbir, Ch. Sasikala, Ch. V. Ramana
    Antonie van Leeuwenhoek.2021; 114(4): 341.     CrossRef
  • Characterization of Sulfurimonas hydrogeniphila sp. nov., a Novel Bacterium Predominant in Deep-Sea Hydrothermal Vents and Comparative Genomic Analyses of the Genus Sulfurimonas
    Shasha Wang, Lijing Jiang, Qitao Hu, Liang Cui, Bitong Zhu, Xiaoteng Fu, Qiliang Lai, Zongze Shao, Suping Yang
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  • Elizabethkingia argenteiflava sp. nov., isolated from the pod of soybean, Glycine max
    Jun-Hee Hwang, Jihyeon Kim, Jae-heon Kim, SangJoon Mo
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Clostridium fessum sp. nov., isolated from human faeces
    Boram Seo, Kyungchan Jeon, Inwoo Baek, Yung Mi Lee, Kiwoon Baek, GwangPyo Ko
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • A sulfate-reducing bacterial genus, Desulfosediminicola gen. nov., comprising two novel species cultivated from tidal-flat sediments
    Jaeho Song, Juchan Hwang, Ilnam Kang, Jang-Cheon Cho
    Scientific Reports.2021;[Epub]     CrossRef
  • Hyphomicrobium album sp. nov., isolated from mountain soil and emended description of genus Hyphomicrobium
    Qing Xu, Yuxiao Zhang, Xing Wang, Gejiao Wang
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  • Bowmanella yangjiangensis sp. nov. and Amphritea pacifica sp. nov., isolated from mariculture fishponds in China
    Zhipeng Cai, Huibin Lu, Youfeng Qian, Letian Chen, Meiying Xu
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Dyella telluris sp. nov. and Dyella acidiphila sp. nov., isolated from forest soil of Dinghushan Biosphere Reserve, China
    Tao Huang, Jia-cheng Fu, Shuo-han Dong, Qiu-mei Zhang, Ting-ting Wu, Li-hong Qiu
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Noviherbaspirillum pedocola sp. nov., isolated from oil-contaminated experimental soil
    Dhiraj Kumar Chaudhary, Ram Hari Dahal, Yongseok Hong
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  • Reclassification of Facklamia ignava, Facklamia sourekii and Facklamia tabacinasalis as Falseniella ignava gen. nov., comb. nov., Hutsoniella sourekii gen. nov., comb. nov., and Ruoffia tabacinasalis gen. nov., comb. nov., and description of Ruoffia halot
    Rashmi Fotedar, Krithivasan Sankaranarayanan, Matthew E. Caldwell, Aisha Zeyara, Amina Al Malki, Ridhima Kaul, Hamad Al Shamari, Mohammad Ali, Masoud Al Marri, Paul A. Lawson
    Antonie van Leeuwenhoek.2021; 114(8): 1181.     CrossRef
  • Reconstructing Draft Genomes Using Genome Resolved Metagenomics Reveal Arsenic Metabolizing Genes and Secondary Metabolites in Fresh Water Lake in Eastern India
    Samrat Ghosh, Aditya Narayan Sarangi, Mayuri Mukherjee, Deeksha Singh, Madduluri Madhavi, Sucheta Tripathy
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  • Xyloglucan processing machinery in Xanthomonas pathogens and its role in the transcriptional activation of virulence factors
    Plinio S. Vieira, Isabela M. Bonfim, Evandro A. Araujo, Ricardo R. Melo, Augusto R. Lima, Melissa R. Fessel, Douglas A. A. Paixão, Gabriela F. Persinoti, Silvana A. Rocco, Tatiani B. Lima, Renan A. S. Pirolla, Mariana A. B. Morais, Jessica B. L. Correa, L
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  • Mesobacillus aurantius sp. nov., isolated from an orange-colored pond near a solar saltern
    Anusha Rai, N. Smita, A. Shabbir, U. Jagadeeshwari, T. Keertana, Ch. Sasikala, Ch. V. Ramana
    Archives of Microbiology.2021; 203(4): 1499.     CrossRef
  • Paenibacillus foliorum sp. nov., Paenibacillus phytohabitans sp. nov., Paenibacillus plantarum sp. nov., Paenibacillus planticolens sp. nov., Paenibacillus phytorum sp. nov. and Paenibacillus germinis sp. nov., isolated from the Arabidopsis t
    Shan Shan Qi, Margo Cnockaert, Aurélien Carlier, Peter A. Vandamme
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Marinobacter orientalis sp. nov., a thiosulfate-oxidizing bacterium isolated from a marine solar saltern
    Feng-Bai Lian, Xu-Yang Chen, Shan Jiang, Guang-Yu Li, Zong-Jun Du
    Antonie van Leeuwenhoek.2021; 114(6): 765.     CrossRef
  • Cold-Active Shewanella glacialimarina TZS-4T nov. Features a Temperature-Dependent Fatty Acid Profile and Putative Sialic Acid Metabolism
    Muhammad Suleman Qasim, Mirka Lampi, Minna-Maria K. Heinonen, Berta Garrido-Zabala, Dennis H. Bamford, Reijo Käkelä, Elina Roine, Leif Peter Sarin
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  • Descriptions of Roseiconus nitratireducens gen. nov. sp. nov. and Roseiconus lacunae sp. nov.
    Dhanesh Kumar, Gaurav Kumar, Jagadeeshwari Uppada, Shabbir Ahmed, Chintalapati Sasikala, Chintalapati Venkata Ramana
    Archives of Microbiology.2021; 203(2): 741.     CrossRef
  • Comparative Genome Analysis of Bacillus amyloliquefaciens Focusing on Phylogenomics, Functional Traits, and Prevalence of Antimicrobial and Virulence Genes
    Hualin Liu, Vimalkumar Prajapati, Shobha Prajapati, Harsh Bais, Jianguo Lu
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  • Taibaiella lutea sp. nov., Isolated from Ubiquitous Weedy Grass
    Geeta Chhetri, Inhyup Kim, Jiyoun Kim, Minchung Kang, Taegun Seo
    Current Microbiology.2021; 78(7): 2799.     CrossRef
  • Marinobacter shengliensis subsp. alexandrii Subsp. Nov., Isolated from Cultivable Phycosphere Microbiota of Highly Toxic Dinoflagellate Alexandrium catenella LZT09 and Description of Marinobacter shengliensis Subsp. shengliensis Subsp. Nov
    Xi Yang, Rong Xiang, Nurhezreen Md Iqbal, Yu-Han Duan, Xiao-Ai Zhang, Lei Wang, Lin-Zeng Yu, Jia-Zhou Li, Ming-Fei Sun, Qiao Yang, Chun-Tian Zheng, Shen-Quan Liao
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  • Assessment of Erythrobacter Species Diversity through Pan-Genome Analysis with Newly Isolated Erythrobacter sp. 3-20A1M
    Sang-Hyeok Cho, Yujin Jeong, Eunju Lee, So-Ra Ko, Chi-Yong Ahn, Hee-Mock Oh, Byung-Kwan Cho, Suhyung Cho
    Journal of Microbiology and Biotechnology.2021; 31(4): 601.     CrossRef
  • Phylotaxogenomics for the Reappraisal of the Genus Roseomonas With the Creation of Six New Genera
    Anusha Rai, Uppada Jagadeeshwari, Gupta Deepshikha, Nandardhane Smita, Chintalapati Sasikala, Chintalapati Venkata Ramana
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  • Zafaria cholistanensis gen. nov. sp. nov., a moderately thermotolerant and halotolerant actinobacterium isolated from Cholistan desert soil of Pakistan
    Arshia Amin, Iftikhar Ahmed, Nauman Khalid, Peter Schumann, Hans-Jürgen Busse, Inam Ullah Khan, Ahmad Ali, Shuai Li, Wen-Jun Li
    Archives of Microbiology.2021; 203(4): 1717.     CrossRef
  • Sphingomonas sabuli sp. nov., a carotenoid-producing bacterium isolated from beach sand
    Minchung Kang, Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Gut microbiome drives individual memory variation in bumblebees
    Li Li, Cwyn Solvi, Feng Zhang, Zhaoyang Qi, Lars Chittka, Wei Zhao
    Nature Communications.2021;[Epub]     CrossRef
  • Qipengyuania soli sp. nov., Isolated from Mangrove Soil
    Yang Liu, Tao Pei, Ming-Rong Deng, Honghui Zhu
    Current Microbiology.2021; 78(7): 2806.     CrossRef
  • Description of Microbacterium luteum sp. nov., Microbacterium cremeum sp. nov., and Microbacterium atlanticum sp. nov., three novel C50 carotenoid producing bacteria
    Fuquan Xie, Siwen Niu, Xihuang Lin, Shengxiang Pei, Li Jiang, Yun Tian, Gaiyun Zhang
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  • Arthrobacter cheniae and Arthrobacter frigidicola sp. nov., isolated from a glacier
    Lei-Lei Yang, Hong-Can Liu, Qing Liu, Yu-Hua Xin
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  • Stappia albiluteola sp. nov., isolated from marine sediment
    Shan Jiang, You-Yang Sun, Feng-Bai Lian, Xiao-Kui Zhang, Zong-Jun Du
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Flagellatimonas centrodinii gen. nov., sp. nov., a novel member of the family Nevskiaceae isolated from toxin-producing dinoflagellate Centrodinium punctatum
    Yue Jiang, Lingmin Jiang, Yuxin Peng, Ki-Hyun Kim, Hyeon Ho Shin, Young-Min Kim, Jiyoung Lee, Zhun Li
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Adlercreutzia hattorii sp. nov., an equol non-producing bacterium isolated from human faeces
    Mitsuo Sakamoto, Nao Ikeyama, Masahiro Yuki, Takumi Murakami, Hiroshi Mori, Takao Iino, Moriya Ohkuma
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Anaerosporobacter faecicola sp. nov. isolated from faeces of Korean cow
    Seung-Hyeon Choi, Jam-Eon Park, Ji Young Choi, Ji-Sun Kim, Se Won Kang, Jiyoung Lee, Mi-Kyung Lee, Jung-Sook Lee, Ju Huck Lee, Hyunjung Jung, Tai-Young Hur, Hyeun Bum Kim, Ju-Hoon Lee, Jae-Kyung Kim, Seung-Hwan Park
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Marixanthomonas spongiae sp. nov., isolated from marine sponge
    Lingping Zhuang, Haiyue Pang, Li Xu, Dan Chen
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Alkalihalobacterium elongatum gen. nov. sp. nov.: An Antibiotic-Producing Bacterium Isolated From Lonar Lake and Reclassification of the Genus Alkalihalobacillus Into Seven Novel Genera
    Amaraja Joshi, Sonia Thite, Prachi Karodi, Neetha Joseph, Tushar Lodha
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Aliidiomarina indica sp. nov., isolated from deep seawater
    Lei Song, Hongcan Liu, Ying Huang, Xin Dai, Yuguang Zhou
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • First description outside Europe of the emergent pathogen Vibrio europaeus in shellfish aquaculture
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  • Chryseoglobus indicus sp. nov., isolated from deep sea water
    Shengxiang Pei, Fuquan Xie, Wenjing Wang, Shuang Zhang, Gaiyun Zhang
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Sphingosinicella flava sp. nov., indole acetic acid producing bacteria isolated from maize field soil
    Geeta Chhetri, Minchung Kang, Jiyoun Kim, Inhyup Kim, Yoonseop So, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Duganella aceris sp. nov., isolated from tree sap and proposal to transfer of Rugamonas aquatica and Rugamonas rivuli to the genus Duganella as Duganella aquatica comb. nov., with the emended description of the genus Rugamonas
    Dabin Jeon, In Seop Kim, Hanna Choe, Ji-Sun Kim, Soon Dong Lee
    Archives of Microbiology.2021; 203(6): 2843.     CrossRef
  • Hymenobacter puniceus sp. nov., radiation resistant bacteria isolated from soil in South Korea
    Yuna Park, Soohyun Maeng, Tuvshinzaya Damdintogtokh, Minji Bang, Hyejin Oh, Sathiyaraj Srinivasan, Myung Kyum Kim
    Antonie van Leeuwenhoek.2021; 114(10): 1647.     CrossRef
  • Tessaracoccus coleopterorum sp. nov., isolated from the intestine of the dark diving beetle, Hydrophilus acuminatus
    Dong-Wook Hyun, Hojun Sung, Pil Soo Kim, Jae-Yun Lee, Yun-Seok Jeong, Ji-Hyun Yun, Jee-Won Choi, Jeong Eun Han, So-Yeon Lee, Euon Jung Tak, June-Young Lee, Hyun Sik Kim, Jin-Woo Bae
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Limnohabitans radicicola sp. nov., a slow-growing bacterium isolated from rhizosphere of rice plant and emended description of the genus Limnohabitans
    Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Minchung Kang, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Distribution and Diversity of Nisin Producing LAB in Fermented Food
    Basista Rabina Sharma, Dharana Jayant, Kumari Rajshee, Yashika Singh, Prakash M. Halami
    Current Microbiology.2021; 78(9): 3430.     CrossRef
  • Chryseobacterium cheonjiense sp. nov., isolated from forest soil
    Dhiraj Kumar Chaudhary, Ram Hari Dahal, Dong-Uk Kim, Jaisoo Kim
    Archives of Microbiology.2021; 203(2): 725.     CrossRef
  • Undibacterium baiyunense sp. nov., Undibacterium curvum sp. nov., Undibacterium fentianense sp. nov., Undibacterium flavidum sp. nov., Undibacterium griseum sp. nov., Undibacterium hunanense sp. nov., Undibacterium luofuense sp. nov., Undibac
    Huibin Lu, Fei Liu, Tongchu Deng, Meiying Xu
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Flavobacterium franklandianum sp. nov. and Flavobacterium gawalongense sp. nov., isolated from glaciers on the Tibetan Plateau
    Qing Liu, Hong-Can Liu, Lei-Lei Yang, Yu-Hua Xin
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Sediminihaliea albiluteola gen. nov., sp. nov., a new member of the family Halieaceae, isolated from marine sediment
    Shan Jiang, Feng-Bai Lian, You-Yang Sun, Xiao-Kui Zhang, Zong-Jun Du
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Fusibacter ferrireducens sp. nov., an anaerobic, Fe(Ⅲ)- and sulphur-reducing bacterium isolated from mangrove sediment
    Donghua Qiu, Xiang Zeng, Lingyu Zeng, Guangyu Li, Zongze Shao
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Geothermobacter hydrogeniphilus sp. nov., a mesophilic, iron(III)-reducing bacterium from seafloor/subseafloor environments in the Pacific Ocean, and emended description of the genus Geothermobacter
    Ileana Pérez-Rodríguez, Jessica K. Choi, Karla Abuyen, Madeline Tyler, Cynthia Ronkowski, Eric Romero, Anthony Trujillo, Jason Tremblay, Isabella Viney, Pratixaben Savalia, Jan P. Amend
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Oryzicola mucosus gen. nov., sp. nov., a novel slime producing bacterium belonging to the family Phyllobacteriaceae isolated from the rhizosphere of rice plants
    Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Minchung Kang, Yoonseop So, Taegun Seo
    Antonie van Leeuwenhoek.2021; 114(11): 1925.     CrossRef
  • Ostreibacterium oceani gen. nov., sp. nov., isolated from oyster, and description of Ostreibacteriaceae fam. nov.
    Chao-Nan Wang, Feng-Qing Wang, Yuan Liu, Ming-Yi Wang, Zong-Jun Du
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Salegentibacter maritimus sp. nov., isolated from marine coastal sediment
    Feng-Bai Lian, Shan Jiang, Ke-Lei Zhu, Dan-Dan Shang, Jing Zhang, Zong-Jun Du
    Systematic and Applied Microbiology.2021; 44(3): 126209.     CrossRef
  • Solimonas marina sp. nov., isolated from deep seawater of the Pacific Ocean
    Xiupian Liu, Qiliang Lai, Fengqin Sun, Yaping Du, Yingbao Gai, Guangyu Li, Zongze Shao
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Phylo-taxogenomics of the genus Tautonia with descriptions of Tautonia marina sp. nov., Tautonia rosea sp. nov., and emended description of the genus
    Kumar Gaurav, Dhanesh Kumar, U. Jagadeeshwari, A. Shabbir, Ch. Sasikala, Ch.V. Ramana
    Systematic and Applied Microbiology.2021; 44(4): 126229.     CrossRef
  • Reclassification of Algibacter wandonensis as a Later Heterotypic Synonym of Algibacter lectus Based on Whole-Genome Sequence Analysis
    Ang Liu, Hui Wang, Yuan-Yuan Yang, Qing-Jie Xue, Xiu-Zhen Li
    Current Microbiology.2021; 78(3): 1034.     CrossRef
  • Vibrio ziniensis sp. nov., isolated from mangrove sediments
    Jie Wu, Wu Qu, Qiliang Lai, Shengxiang Pei, Tianyou Zhang, Yan Zhuang, Zhuhua Chan, Runying Zeng
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Parasphingopyxis marina sp. nov. isolated from coastal seawater
    Soo-Yeon Choi, Ji-Sung Oh, Dong-Hyun Roh
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Kushneria phosphatilytica sp. nov., a phosphate-solubilizing bacterium isolated from a solar saltern
    Guang-Xun Du, Ling-Yun Qu, Xu-Guang Hong, Cheng-Hua Li, De-Wen Ding, Ping Gao, Qin-Zeng Xu
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Phylogenomic Analyses of the Genus Pseudomonas Lead to the Rearrangement of Several Species and the Definition of New Genera
    Zaki Saati-Santamaría, Ezequiel Peral-Aranega, Encarna Velázquez, Raúl Rivas, Paula García-Fraile
    Biology.2021; 10(8): 782.     CrossRef
  • Marinobacter alexandrii sp. nov., a novel yellow-pigmented and algae growth-promoting bacterium isolated from marine phycosphere microbiota
    Qiao Yang, Qi Feng, Bao-ping Zhang, Jia-jun Gao, Zhi Sheng, Qi-ping Xue, Xiao-ling Zhang
    Antonie van Leeuwenhoek.2021; 114(6): 709.     CrossRef
  • Multi-Omics Characterization of Host-Derived Bacillus spp. Probiotics for Improved Growth Performance in Poultry
    Dwi Susanti, Alyssa Volland, Nilesh Tawari, Nielson Baxter, Dharanesh Gangaiah, Germán Plata, Akshitha Nagireddy, Troy Hawkins, Shrinivasrao P. Mane, Arvind Kumar
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  • Salibaculum halophilum gen. nov., sp. nov. and Salibaculum griseiflavum sp. nov., in the family Rhodobacteraceae
    Ke-Lei Zhu, Xiao-Qun Wang, Tian-Shu Zhang, Dan-Dan Shang, Zong-Jun Du
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Aquabacterium terrae sp. nov., isolated from soil
    Ram Hari Dahal, Ji Yeon Han, Hyosun Lee, Dhiraj Kumar Chaudhary, Dong-Uk Kim
    Archives of Microbiology.2021; 203(6): 3183.     CrossRef
  • Safety Assessment of Lactiplantibacillus (formerly Lactobacillus) plantarum Q180
    Yoo Jin Kwon, Byung Hee Chun, Hye Su Jung, Jaeryang Chu, Hyunchae Joung, Sung Yurb Park, Byoung Kook Kim, Che Ok Jeon
    Journal of Microbiology and Biotechnology.2021; 31(10): 1420.     CrossRef
  • Collimonas silvisoli sp. nov. and Collimonas humicola sp. nov., two novel species isolated from forest soil
    Jiali Li, Mingkai Pan, Xianjiao Zhang, Yang Zhou, Guang-Da Feng, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Flavobacterium tagetis sp. nov., a novel urea-hydrolysing bacterium isolated from the roots of Tagetes patula
    Geeta Chhetri, Inhyup Kim, Minchung Kang, Jiyoun Kim, Yoonseop So, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Croceicoccus bisphenolivorans sp. nov., a bisphenol A-degrading bacterium isolated from seawater
    Jiangwei Li, Anyi Hu, Min Lv, Chang-Ping Yu
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Vineibacter terrae gen. nov., sp. nov., an ammonium-assimilating and nitrate-reducing bacterium isolated from vineyard soil
    Shih-Yao Lin, Asif Hameed, Chia-Fang Tsai, Chiu-Chung Young
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Geomesophilobacter sediminis gen. nov., sp. nov., Geomonas propionica sp. nov. and Geomonas anaerohicana sp. nov., three novel members in the family Geobacterecace isolated from river sediment and paddy soil
    Zhengcheng Zhang, Zhenxing Xu, Yoko Masuda, Xueding Wang, Natsumi Ushijima, Yutaka Shiratori, Keishi Senoo, Hideomi Itoh
    Systematic and Applied Microbiology.2021; 44(5): 126233.     CrossRef
  • Rouxiella aceris sp. nov., isolated from tree sap and the emended description of the genus Rouxiella
    Soon Dong Lee, Hong Lim Yang, In Seop Kim
    Antonie van Leeuwenhoek.2021; 114(7): 1013.     CrossRef
  • Pseudomarimonas arenosa gen. nov., sp. nov. isolated from marine sand
    Veeraya Weerawongwiwat, Jong-Hwa Kim, Jung-Hoon Yoon, Jung-Sook Lee, Ampaitip Sukhoom, Wonyong Kim
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Chitinophaga fulva sp. nov., isolated from forest soil
    Ram Hari Dahal, Dhiraj Kumar Chaudhary, Dong-Uk Kim, Jaisoo Kim
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Horizontal Gene Transfer of Genes Encoding Copper-Containing Membrane-Bound Monooxygenase (CuMMO) and Soluble Di-iron Monooxygenase (SDIMO) in Ethane- and Propane-Oxidizing Rhodococcus Bacteria
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    Applied and Environmental Microbiology.2021;[Epub]     CrossRef
  • Arachidicoccus soli sp. nov., a bacterium isolated from soil
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    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Quantitative Real-Time PCR Assay for the Detection of Pectobacterium parmentieri, a Causal Agent of Potato Soft Rot
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    Plants.2021; 10(9): 1880.     CrossRef
  • Phylogenomic Framework for Taxonomic Delineation of Paracoccus spp. and Exploration of Core-Pan Genome
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    Indian Journal of Microbiology.2021; 61(2): 180.     CrossRef
  • Echinicola arenosa sp. nov., isolated from marine sand
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    Archives of Microbiology.2021; 203(9): 5675.     CrossRef
  • Cold-shock gene cspC in the genome of Massilia polaris sp. nov. revealed cold-adaptation
    Ram Hari Dahal, Dhiraj Kumar Chaudhary, Dong-Uk Kim, Jaisoo Kim
    Antonie van Leeuwenhoek.2021; 114(8): 1275.     CrossRef
  • Complete genome sequence of Streptomyces sp. HSG2 from rhizosphere soil of mangrove in Qingmei Gang, Sanya
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    Archives of Microbiology.2021; 203(6): 3519.     CrossRef
  • Martelella alba sp. nov., isolated from mangrove rhizosphere soil within the Beibu Gulf
    Mi Li, Chenghai Gao, Yuyao Feng, Kai Liu, Pei Cao, Yonghong Liu, Xiangxi Yi
    Archives of Microbiology.2021; 203(4): 1779.     CrossRef
  • Photobacterium arenosum sp. nov., isolated from marine sediment sand
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    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Oricola thermophila sp. nov., a marine bacterium isolated from tidal flat sediment and emended description of the genus Oricola Hameed et al. 2015
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    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Zeimonas arvi gen. nov., sp. nov., of the family Burkholderiaceae, harboring biphenyl- and phenolic acid-metabolizing genes, isolated from a long-term ecological research field
    Shih-Yao Lin, Asif Hameed, Chia-Fang Tsai, Chiu-Chung Young
    Antonie van Leeuwenhoek.2021; 114(12): 2101.     CrossRef
  • Chitinilyticum piscinae sp. nov., isolated from aquaculture water
    Tao Pei, Juan Du, Yang Liu, Ming-Rong Deng, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Usitatibacter rugosus gen. nov., sp. nov. and Usitatibacter palustris sp. nov., novel members of Usitatibacteraceae fam. nov. within the order Nitrosomonadales isolated from soil
    Selma Vieira, Katharina J. Huber, Meina Neumann-Schaal, Alicia Geppert, Manja Luckner, Gerhard Wanner, Jörg Overmann
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Caenimonas soli sp. nov., isolated from soil
    Ram Hari Dahal, Hyosun Lee, Dhiraj Kumar Chaudhary, Dae-Young Kim, Jigwan Son, Jaisoo Kim, Jong-Ok Ka, Dong-Uk Kim
    Archives of Microbiology.2021; 203(3): 1123.     CrossRef
  • Coprobacter secundus subsp. similis subsp. nov. and Solibaculum mannosilyticum gen. nov., sp. nov., isolated from human feces
    Mitsuo Sakamoto, Nao Ikeyama, Atsushi Toyoda, Takumi Murakami, Hiroshi Mori, Sho Morohoshi, Tadao Kunihiro, Takao Iino, Moriya Ohkuma
    Microbiology and Immunology.2021; 65(6): 245.     CrossRef
  • Mesobacillus harenae sp. nov., isolated from the sandy soil of a cold desert
    Gaosen Zhang, Ruiqi Yang, Tuo Chen, Binglin Zhang, Hui Yang, Xiukun Wu, Haining Gao, Wei Zhang, Guangxiu Liu
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Pedobacter riviphilus sp. nov., isolated from stream sediment
    Hong Sik Im, Yochan Joung, Sang-Seob Lee
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Paraliobacillus salinarum sp. nov., isolated from saline soil in Yingkou, China
    Ya-Lin Yin, Fang-Ling Li, Xian-Yuan Du, Ya-Xi Zhang, Lei Wang
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Leucobacter coleopterorum sp. nov., Leucobacter insecticola sp. nov., and Leucobacter viscericola sp. nov., isolated from the intestine of the diving beetles, Cybister brevis and Cybister lewisianus, and emended description of the genus Leucobacter
    Dong-Wook Hyun, Hojun Sung, Pil Soo Kim, Ji-Hyun Yun, Jin-Woo Bae
    Journal of Microbiology.2021; 59(4): 360.     CrossRef
  • Brevibacterium limosum sp. nov., Brevibacterium pigmenatum sp. nov., and Brevibacterium atlanticum sp. nov., three novel dye decolorizing actinobacteria isolated from ocean sediments
    Shengxiang Pei, Siwen Niu, Fuquan Xie, Wenjing Wang, Shuang Zhang, Gaiyun Zhang
    Journal of Microbiology.2021; 59(10): 898.     CrossRef
  • Saccharobesus litoralis gen. nov., sp. nov., a novel alginate-degrading bacterium isolated from the surface of intertidal algal turf
    Rosyada Amran Amrina, Go Furusawa, Nyok-Sean Lau
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Sphingopyxis microcysteis sp. nov., a novel bioactive exopolysaccharides-bearing Sphingomonadaceae isolated from the Microcystis phycosphere
    Xiao-ling Zhang, Gui-xian Li, Ya-ming Ge, Nurhezreen Md Iqbal, Xi Yang, Zhen-dong Cui, Qiao Yang
    Antonie van Leeuwenhoek.2021; 114(6): 845.     CrossRef
  • Aquisphaera insulae sp. nov., a new member in the family Isosphaeraceae, isolated from the floating island of Loktak lake and emended description of the genus Aquisphaera
    Gaurav Kumar, Khongsai L. Lhingjakim, Jagadeeshwari Uppada, Shabbir Ahamad, Dhanesh Kumar, Gulam Mohammad Kashif, Chintalapati Sasikala, Chintalapati Venkata Ramana
    Antonie van Leeuwenhoek.2021; 114(9): 1465.     CrossRef
  • Description of Lujinxingia vulgaris sp. nov., isolated from coastal sediment via prey-traps
    Shuo Wang, Da-Shuai Mu, Guang-Yu Li, Zong-Jun Du
    Antonie van Leeuwenhoek.2021; 114(11): 1805.     CrossRef
  • Novosphingobium olei sp. nov., with the ability to degrade diesel oil, isolated from oil-contaminated soil and proposal to reclassify Novosphingobium stygium as a later heterotypic synonym of Novosphingobium aromaticivorans
    Dhiraj Kumar Chaudhary, Ram Hari Dahal, Dong-Uk Kim, Jaisoo Kim
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Pontibacter aquaedesilientis sp. nov., isolated from Jeongbang Waterfall, Jeju Island
    Geeta Chhetri, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Aeromicrobium terrae sp. nov., isolated from a maize field
    Shih-Yao Lin, Chia-Fang Tsai, Asif Hameed, Chiu-Chung Young
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • UBCG2: Up-to-date bacterial core genes and pipeline for phylogenomic analysis
    Jihyeon Kim, Seong-In Na, Dongwook Kim, Jongsik Chun
    Journal of Microbiology.2021; 59(6): 609.     CrossRef
  • Engineering Vibrio sp. SP1 for the production of carotenoids directly from brown macroalgae
    Sungwoo Park, Sung Won Cho, Yungyu Lee, Mincheol Choi, Jina Yang, Hojun Lee, Sang Woo Seo
    Computational and Structural Biotechnology Journal.2021; 19: 1531.     CrossRef
  • Aquabacterium soli sp. nov., a novel bacterium isolated from soil under the long-term application of bifenthrin
    Lina Sun, Wei Chen, Kaihua Huang, Weiguang Lyu, Xinhua Gao
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Permianibacter fluminis sp. nov., isolated from a freshwater stream
    Miri S. Park, Jaeho Song, Jaeho Chang, Yochan Joung, Ilnam Kang, Jang-Cheon Cho
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Description of Cohnella zeiphila sp. nov., a bacterium isolated from maize callus cultures
    Eric T. Johnson, Patrick F. Dowd, Christopher D. Skory, Christopher A. Dunlap
    Antonie van Leeuwenhoek.2021; 114(1): 37.     CrossRef
  • Mesorhizobium microcysteis sp. nov., isolated from a culture of Microcystis aeruginosa
    Jaejoon Jung, Ye Lin Seo, Kyeong Ryeol Kim, Hye Yoon Park, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Sphingobacterium micropteri sp. nov. and Sphingobacterium litopenaei sp. nov., isolated from aquaculture water
    Mingxia Zhang, Anzhang Li, Shuaishuai Xu, Meng Chen, Qing Yao, Botao Xiao, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Maritimibacter alexandrii sp. nov., a New Member of Rhodobacteraceae Isolated from Marine Phycosphere
    Xing Wang, Yun Ye, Fei-Fei Xu, Yu-Han Duan, Peng-Fei Xie, Qiao Yang, Xiao-Ling Zhang
    Current Microbiology.2021; 78(11): 3996.     CrossRef
  • Mucilaginibacter glaciei sp. nov. and Mucilaginibacter pankratovii sp. nov., isolated from a glacier on the Tibetan Plateau
    Lei-Lei Yang, Yu Pang, Hong-Can Liu, Yu-Hua Xin, Qing Liu
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Pedobacter endophyticus sp. nov., an endophytic bacterium isolated from Carex pumila
    Yuxin Peng, Lingmin Jiang, Jiyoon Seo, Zhun Li, Hanna Choe, Jae Cheol Jeong, Suk Weon Kim, Young-Min Kim, Cha Young Kim, Jiyoung Lee
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Zongyanglinia huanghaiensis gen. nov., sp. nov., a novel denitrifying bacterium isolated from the yellow sea, and transfer of Pelagicola marinus to Zongyanglinia gen. nov. as Zongyanglinia marinus comb. nov
    Lili Xu, Ang Liu, Yan-Jiao Zhang
    Antonie van Leeuwenhoek.2021; 114(2): 137.     CrossRef
  • Pyomelanin-Producing Brevundimonas vitisensis sp. nov., Isolated From Grape (Vitis vinifera L.)
    Lingmin Jiang, Doeun Jeon, Jueun Kim, Chul Won Lee, Yuxin Peng, Jiyoon Seo, Ju Huck Lee, Jin Hyub Paik, Cha Young Kim, Jiyoung Lee
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Belnapia mucosa sp. nov. and Belnapia arida sp. nov., isolated from desert biocrust
    Esther Molina-Menor, Àngela Vidal-Verdú, Leila Satari, Alba Calonge-García, Javier Pascual, Juli Peretó, Manuel Porcar
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Nocardioides donggukensis sp. nov. and Hyunsoonleella aquatilis sp. nov., isolated from Jeongbang Waterfall on Jeju Island
    Inhyup Kim, Geeta Chhetri, Jiyoun Kim, Minchung Kang, Yoonseop So, Byungjo Lee, Wonhee Jang, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Yangia mangrovi sp. nov., a novel member of the Roseobacter clade isolated from mangrove soil and emended description of Yangia pacifica Dai et al. 2006
    Ashish Verma, Shiva S. Sundharam, Yash Pal, Bhawana Bisht, Pooja Yadav, Srinivasan Krishnamurthi
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Draft genome of a novel methanotrophic Methylobacter sp. from the volcanic soils of Pantelleria Island
    Carmen Hogendoorn, Nunzia Picone, Femke van Hout, Sophie Vijverberg, Lianna Poghosyan, Theo A. van Alen, Jeroen Frank, Arjan Pol, Antonia L. Gagliano, Mike S. M. Jetten, Walter D’Alessandro, Paola Quatrini, Huub J. M. Op den Camp
    Antonie van Leeuwenhoek.2021; 114(3): 313.     CrossRef
  • Strain-Specific Identification and In Vivo Immunomodulatory Activity of Heat-Killed Latilactobacillus sakei K040706
    Kyung-Sook Chung, Jae Woong Choi, Ji-Sun Shin, Seo-Yeon Kim, Hee-Soo Han, Su-Yeon Kim, Kwang-Young Lee, Joo-Yeon Kang, Chang-Won Cho, Hee-Do Hong, Young Kyoung Rhee, Kyung-Tae Lee
    Foods.2021; 10(12): 3034.     CrossRef
  • Zophobihabitans entericus gen. nov., sp. nov., a new member of the family Orbaceae isolated from the gut of a superworm Zophobas morio
    Chih-Horng Kuo, Pin-Yun Huang, Shih-Yi Sheu, Der-Shyan Sheu, Li-Cheng Jheng, Wen-Ming Chen
    International Journal of Systematic and Evolutionary Microbiology.2021;[Epub]     CrossRef
  • Description of Vagococcus coleopterorum sp. nov., isolated from the intestine of the diving beetle, Cybister lewisianus, and Vagococcus hydrophili sp. nov., isolated from the intestine of the dark diving beetle, Hydrophilus acuminatus, and emended descrip
    Dong-Wook Hyun, Euon Jung Tak, Pil Soo Kim, Jin-Woo Bae
    Journal of Microbiology.2021; 59(2): 132.     CrossRef
  • Devosia aurantiaca sp. nov., Isolated from Mountain Soil and Proposal of Albitalea gen. nov. to Replace the Illegitimate Prokaryotic Genus Name Geomonas Khan et al. 2020
    Shehzad Abid Khan, Hyung Min Kim, Byung Hee Chun, Che Ok Jeon
    Current Microbiology.2021; 78(7): 2548.     CrossRef
  • An atlas of bacterial secondary metabolite biosynthesis gene clusters
    Bin Wei, Ao‐Qi Du, Zhen‐Yi Zhou, Cong Lai, Wen‐Chao Yu, Jin‐Biao Yu, Yan‐Lei Yu, Jian‐Wei Chen, Hua‐Wei Zhang, Xue‐Wei Xu, Hong Wang
    Environmental Microbiology.2021; 23(11): 6981.     CrossRef
  • Nesterenkonia sedimenti sp. nov., isolated from marine sediment
    Fuquan Xie, Shengxiang Pei, Yubian Zhang, Yun Tian, Gaiyun Zhang
    Archives of Microbiology.2021; 203(10): 6287.     CrossRef
  • Phylogenomics reveals the evolution of root nodulating alpha- and beta-Proteobacteria (rhizobia)
    Saleh Rahimlou, Mohammad Bahram, Leho Tedersoo
    Microbiological Research.2021; 250: 126788.     CrossRef
  • Mesonia hitae sp. nov., isolated from the seawater of the South Atlantic Ocean
    Ying Zhou, Xiujun Gao, Jingjing Xu, Guizhen Li, Rui Ma, Peisheng Yan, Chunming Dong, Zongze Shao
    International Journal of Systematic and Evolutionary Microbiology.2021;[Epub]     CrossRef
  • Microcella flavibacter sp. nov., isolated from marine sediment, and reclassification of Chryseoglobus frigidaquae, Chryseoglobus indicus, and Yonghaparkia alkaliphila as Microcella frigidaquae comb. nov., Microcella indica nom. nov., and Microcella alkali
    Fuquan Xie, Shengxiang Pei, Xiaoyun Huang, Lina Wang, Jinyan Kou, Gaiyun Zhang
    Antonie van Leeuwenhoek.2021; 114(12): 2133.     CrossRef
  • Hongsoonwoonella zoysiae gen. nov., sp. nov., a new member of the family Stappiaceae isolated from a tidal mudflat
    Soon Dong Lee, Sung-Min Kim, Hong Lim Yang, Yeong-Sik Byeon, In Seop Kim
    Archives of Microbiology.2021; 203(4): 1335.     CrossRef
  • Poseidonibacter parvus sp. nov., isolated from a squid
    Min Ji Kim, Min-gyung Baek, Su-Kyoung Shin, Hana Yi
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Methylomonas albis sp. nov. and Methylomonas fluvii sp. nov.: Two cold-adapted methanotrophs from the river Elbe and emended description of the species Methylovulum psychrotolerans
    Ingeborg Bussmann, Fabian Horn, Michael Hoppert, Karl-Walter Klings, Anke Saborowski, Julia Warnstedt, Susanne Liebner
    Systematic and Applied Microbiology.2021; 44(6): 126248.     CrossRef
  • Chitinibacter bivalviorum sp. nov., isolated from the gut of the freshwater mussel Anodonta arcaeformis
    Jee-Won Choi, Jae-Yun Lee, Dong-Wook Hyun, June-Young Lee, Pil Soo Kim, Jeong Eun Han, Yun-Seok Jeong, So-Yeon Lee, Hojun Sung, Euon Jung Tak, Hyun Sik Kim, Jin-Woo Bae
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Aerobic Denitrification and Heterotrophic Sulfur Oxidation in the Genus Halomonas Revealed by Six Novel Species Characterizations and Genome-Based Analysis
    Liping Wang, Zongze Shao
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • Horizontal Gene Transfer and Genomic Erosion Shape Functional Differences of the Two-Partner Secretion Toxin Exla in the Genus Pseudomonas
    Viviana Job, Laura Gomez-Valero, Adèle Renier, Christophe Rusniok, Stéphanie Bouillot, Viviane Chenal-Francisque, Erwan Gueguen, Annie Adrait, Mylène Robert-Genthon, Katy Jeannot, Peter Panchev, Sylvie Elsen, Marie-Odile Fauvarque, Yohann Couté, Carmen Bu
    SSRN Electronic Journal .2021;[Epub]     CrossRef
  • Schlegelella koreensis sp. nov., isolated from evaporator core of automobile air conditioning system
    Dhiraj Kumar Chaudhary, Hyosun Lee, Ram Hari Dahal, Dong-Uk Kim
    Archives of Microbiology.2021; 203(5): 2373.     CrossRef
  • Chryseobacterium potabilaquae sp. nov., Chryseobacterium aquaeductus sp. nov. and Chryseobacterium fistulae sp. nov., from drinking water systems
    Teresa Lucena, María A. Ruvira, M. Carmen Macián, David R. Arahal, Rosa Aznar, María J. Pujalte
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Flavobacterium undicola sp. nov., isolated from a freshwater lake
    Wen-Ming Chen, Yi-Ru Xie, Soon-Wo Kwon, Shih-Yi Sheu
    Archives of Microbiology.2021; 203(3): 989.     CrossRef
  • Flavobacterium difficile sp. nov., isolated from a freshwater waterfall
    Wen-Ming Chen, Ya-Xiu You, Chiu-Chung Young, Shih-Yao Lin, Shih-Yi Sheu
    Archives of Microbiology.2021; 203(7): 4449.     CrossRef
  • Salipiger mangrovisoli sp. nov., isolated from mangrove soil and the proposal for the reclassification of Paraphaeobacter pallidus as Salipiger pallidus comb. nov.
    Juan Du, Yang Liu, Tao Pei, Ming-Rong Deng, Honghui Zhu
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Classification of uncultivated anammox bacteria and Candidatus Uabimicrobium into new classes and provisional nomenclature as Candidatus Brocadiia classis nov. and Candidatus Uabimicrobiia classis nov. of the phylum Planctomycetes and novel family Candida
    Tushar Lodha, Simran Narvekar, Prachi Karodi
    Systematic and Applied Microbiology.2021; 44(6): 126272.     CrossRef
  • Sulfurimonas indica sp. nov., a hydrogen- and sulfur-oxidizing chemolithoautotroph isolated from a hydrothermal sulfide chimney in the Northwest Indian Ocean
    Qitao Hu, Shasha Wang, Qiliang Lai, Zongze Shao, Lijing Jiang
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Pontibacter cellulosilyticus sp. nov., a carboxymethyl cellulose-hydrolysing bacterium isolated from coastal water
    Minchung Kang, Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Chitinophaga rhizophila sp. nov., isolated from rhizosphere soil of banana
    Xian-Jiao Zhang, Guang-Da Feng, Fan Yang, Honghui Zhu, Qing Yao
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Jinshanibacter allomyrinae sp. nov., isolated from larvae of Allomyrina dichotoma, proposal of Insectihabitans xujianqingii gen. nov., comb. nov. and emended descriptions of the genera Jinshanibacter, Limnobaculum and Pragia
    Soon Dong Lee, Yeong-Sik Byeon, Sung-Min Kim, Hong Lim Yang, In Seop Kim
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Revealing taxon-specific heavy metal-resistance mechanisms in denitrifying phosphorus removal sludge using genome-centric metaproteomics
    Yuan Lin, Liye Wang, Ke Xu, Kan Li, Hongqiang Ren
    Microbiome.2021;[Epub]     CrossRef
  • Development of qPCR Detection Assay for Potato Pathogen Pectobacterium atrosepticum Based on a Unique Target Sequence
    Anna A. Lukianova, Peter V. Evseev, Alexander A. Stakheev, Irina B. Kotova, Sergey K. Zavriev, Alexander N. Ignatov, Konstantin A. Miroshnikov
    Plants.2021; 10(2): 355.     CrossRef
  • Marivivens aquimaris sp. nov., isolated from seawater
    Jeong Ah Kim, Binna Lee, Ji Young Kang, Jae Jun Song, Jong Hyun Choi
    Archives of Microbiology.2021; 203(6): 3229.     CrossRef
  • Lysobacter arenosi sp. nov. and Lysobacter solisilvae sp. nov. isolated from soil
    Kyeong Ryeol Kim, Kyung Hyun Kim, Shehzad Abid Khan, Hyung Min Kim, Dong Min Han, Che Ok Jeon
    Journal of Microbiology.2021; 59(8): 709.     CrossRef
  • Sediminibacterium soli sp. nov., isolated from soil
    Shijuan Wu, Limin Zhong, Shuijiao Liao, Tengfei Li, Zijie Zhou, Gejiao Wang
    Archives of Microbiology.2021; 203(3): 967.     CrossRef
  • Rhodobacter amnigenus sp. nov. and Rhodobacter ruber sp. nov., isolated from freshwater habitats
    Wen-Ming Chen, Ting-Hsuan Chang, Che-Chia Yang, Der-Shyan Sheu, Li-Cheng Jheng, Shih-Yi Sheu
    International Journal of Systematic and Evolutionary Microbiology.2021;[Epub]     CrossRef
  • Alcanivorax profundimaris sp. nov., a Novel Marine Hydrocarbonoclastic Bacterium Isolated from Seawater and Deep-Sea Sediment
    Chunming Dong, Qiliang Lai, Xiupian Liu, Li Gu, Yu Zhang, Zhangxian Xie, Dazhi Wang, Zongze Shao
    Current Microbiology.2021; 78(3): 1053.     CrossRef
  • Ornithobacterium rhinotracheale: MALDI-TOF MS and Whole Genome Sequencing Confirm That Serotypes K, L and M Deviate from Well-Known Reference Strains and Numerous Field Isolates
    Merima Alispahic, Lukas Endler, Michael Hess, Claudia Hess
    Microorganisms.2021; 9(5): 1006.     CrossRef
  • Geomonas silvestris sp. nov., Geomonas paludis sp. nov. and Geomonas limicola sp. nov., isolated from terrestrial environments, and emended description of the genus Geomonas
    Hideomi Itoh, Zhenxing Xu, Yoko Masuda, Natsumi Ushijima, Chie Hayakawa, Yutaka Shiratori, Keishi Senoo
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Marinobacter mangrovi sp. nov., isolated from mangrove sediment
    En Yi, Zongze Shao, Guizhen Li, Xiaobo Liang, Meixian Zhou
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Paraneptunicella aestuarii gen. nov., sp. nov., a member of the family Alteromonadaceae isolated from seawater in East China Sea
    Yanzhu Zhang, Shufen He, Liufei Shi, Yang Liu, Deqiang Mao, Biying Liu, Xiaoping He, Bahareh Nowruzi, Dawoon Jung, Weiyan Zhang, Lijian Ding, Shan He, Liwei Liu
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Sulfurimonas sediminis sp. nov., a novel hydrogen- and sulfur-oxidizing chemolithoautotroph isolated from a hydrothermal vent at the Longqi system, southwestern Indian ocean
    Shasha Wang, Zongze Shao, Qiliang Lai, Xuewen Liu, Shaobin Xie, Lijing Jiang, Suping Yang
    Antonie van Leeuwenhoek.2021; 114(6): 813.     CrossRef
  • Dyadobacter sandarakinus sp. nov., isolated from Arctic tundra soil, and emended descriptions of Dyadobacter alkalitolerans, Dyadobacter koreensis and Dyadobacter psychrophilus
    Yongping Zhang, Xiaoya Peng, Kun Qin, Jia Liu, Qiang Xu, Jingjing Niu, Yanyan Zheng, Fang Peng
    International Journal of Systematic and Evolutionary Microbiology .2021;[Epub]     CrossRef
  • Current Status and Future Strategies to Increase Secondary Metabolite Production from Cyanobacteria
    Yujin Jeong, Sang-Hyeok Cho, Hookeun Lee, Hyung-Kyoon Choi, Dong-Myung Kim, Choul-Gyun Lee, Suhyung Cho, Byung-Kwan Cho
    Microorganisms.2020; 8(12): 1849.     CrossRef
  • Description of Three Novel Members in the Family Geobacteraceae, Oryzomonas japonicum gen. nov., sp. nov., Oryzomonas sagensis sp. nov., and Oryzomonas ruber sp. nov.
    Zhenxing Xu, Yoko Masuda, Chie Hayakawa, Natsumi Ushijima, Keisuke Kawano, Yutaka Shiratori, Keishi Senoo, Hideomi Itoh
    Microorganisms.2020; 8(5): 634.     CrossRef
  • Hypericibacter terrae gen. nov., sp. nov. and Hypericibacter adhaerens sp. nov., two new members of the family Rhodospirillaceae isolated from the rhizosphere of Hypericum perforatum
    Zahra Noviana, Selma Vieira, Javier Pascual, Serge Alain Tanemossu Fobofou, Manfred Rohde, Cathrin Spröer, Boyke Bunk, Jorg Overmann
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(3): 1850.     CrossRef
  • Mucilaginibacter celer sp. nov. and Aquirhabdus parva gen. nov., sp. nov., isolated from freshwater
    MinJi Kim, Su-Kyoung Shin, Hana Yi
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(10): 5479.     CrossRef
  • Methylotenera oryzisoli sp. nov., a lanthanide-dependent methylotrophic bacteria isolated from rice field soil
    Haoxin Lv, Nurettin Sahin, Akio Tani
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(4): 2713.     CrossRef
  • Lewinella aurantiaca sp. nov., a carotenoid pigment-producing bacterium isolated from surface seawater
    Inhyup Kim, Geeta Chhetri, Jiyoun Kim, Minchung Kang, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(12): 6180.     CrossRef
  • Pseudomonas kitaguniensis sp. nov., a pathogen causing bacterial rot of Welsh onion in Japan
    Hiroyuki Sawada, Takashi Fujikawa, Yoshie Nishiwaki, Harukuni Horita
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(5): 3018.     CrossRef
  • Sandaracinomonas limnophila gen. nov., sp. nov., a new member of the family Cytophagaceae isolated from a freshwater mesocosm
    Wen-Ming Chen, Cheng-Ye Cai, Shih-Yi Sheu
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(4): 2178.     CrossRef
  • Use of Newly Designed Primers for Quantification of Complete Ammonia-Oxidizing (Comammox) Bacterial Clades and Strict Nitrite Oxidizers in the Genus Nitrospira
    Ran Jiang, Jian-Gong Wang, Ting Zhu, Bin Zou, Dan-Qi Wang, Sung-Keun Rhee, Dong An, Zhi-Yuan Ji, Zhe-Xue Quan, Alfons J. M. Stams
    Applied and Environmental Microbiology.2020;[Epub]     CrossRef
  • Importance of Defluviitalea raffinosedens for Hydrolytic Biomass Degradation in Co-Culture with Hungateiclostridium thermocellum
    Regina Rettenmaier, Martina Schneider, Bernhard Munk, Michael Lebuhn, Sebastian Jünemann, Alexander Sczyrba, Irena Maus, Vladimir Zverlov, Wolfgang Liebl
    Microorganisms.2020; 8(6): 915.     CrossRef
  • Flavobacterium restrictum sp. nov., Flavobacterium rhamnosiphilum sp. nov., and Flavobacterium zepuense sp. nov. isolated from glaciers
    Guo-Qing Zhang, Lei-Lei Yang, Qing Liu, Hong-Can Liu, Yu-Guang Zhou, Yu-Hua Xin
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(8): 4583.     CrossRef
  • Arenimonas terrae sp. nov., isolated from orchard soil
    Dong Min Han, Byung Hee Chun, Hyung Min Kim, Shehzad Abid Khan, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(1): 537.     CrossRef
  • Morphologically Different Pectobacterium brasiliense Bacteriophages PP99 and PP101: Deacetylation of O-Polysaccharide by the Tail Spike Protein of Phage PP99 Accompanies the Infection
    Anna A. Lukianova, Mikhail M. Shneider, Peter V. Evseev, Anna M. Shpirt, Eugenia N. Bugaeva, Anastasia P. Kabanova, Ekaterina A. Obraztsova, Kirill K. Miroshnikov, Sofiya N. Senchenkova, Alexander S. Shashkov, Stepan V. Toschakov, Yuriy A. Knirel, Alexand
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Shedding light on biogas: Phototrophic biofilms in anaerobic digesters hold potential for improved biogas production
    Christian Abendroth, Adriel Latorre-Pérez, Manuel Porcar, Claudia Simeonov, Olaf Luschnig, Cristina Vilanova, Javier Pascual
    Systematic and Applied Microbiology.2020; 43(1): 126024.     CrossRef
  • Saliniradius amylolyticus gen. nov., sp. nov., isolated from solar saltern sediment
    Heeyoung Kang, Inseong Cha, Haneul Kim, Kiseong Joh
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(1): 267.     CrossRef
  • Pseudomonas lalkuanensis sp. nov., isolated from a bacterial consortia of contaminated soil enriched for the remediation of e-waste
    Vipool Thorat, Kiran Kirdat, Bhavesh Tiwarekar, Elaine DaCosta, Prasenjit Debbarma, Yogesh Shouche, Shivaji Sathe, Reeta Goel, Tushar Lodha, Amit Yadav
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(12): 6468.     CrossRef
  • Denitrobaculum tricleocarpae gen. nov., sp. nov., a marine bacterium from coralline algae Tricleocarpa sp
    Guanghua Wang, Dahao Tang, Guangyu Li, Shuailiang Xu, Ge Dang, Hongfei Su, Zhiheng Liao, Biao Chen, Wen Huang, Jiayuan Liang, Kefu Yu
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(5): 3335.     CrossRef
  • Roseovarius gahaiensis sp. nov., isolated from Gahai Saline Lake, PR China
    Xia Sun, Fang Wang, Yang Liu, Ying Lu
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(10): 5330.     CrossRef
  • Bacillus yapensis sp. nov., a novel piezotolerant bacterium isolated from deep-sea sediment of the Yap Trench, Pacific Ocean
    Xiashutong Xu, Libo Yu, Guangxin Xu, Qilin Wang, Shiping Wei, Xixiang Tang
    Antonie van Leeuwenhoek.2020; 113(3): 389.     CrossRef
  • Description of Luteithermobacter gelatinilyticus gen. nov., sp. nov., and Paremcibacter congregatus gen. nov., comb. nov. via reclassification of the genus Emcibacter
    Mi-Jeong Park, Teddy Namirimu, Sung-Hyun Yang, Kae Kyoung Kwon
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(8): 4691.     CrossRef
  • Genetic Organization of the aprX-lipA2 Operon Affects the Proteolytic Potential of Pseudomonas Species in Milk
    Christopher Maier, Christopher Huptas, Mario von Neubeck, Siegfried Scherer, Mareike Wenning, Genia Lücking
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Nonomuraea nitratireducens sp. nov., a new actinobacterium isolated from Suaeda australis Moq. rhizosphere
    Yixin Ou, Yong Sheng, Xiaojing Hu, Dongjin Leng, Jiafu Huang, Zhiyu Hu, Linquan Bai, Zixin Deng, Qianjin Kang, Yingying Wu
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(9): 5026.     CrossRef
  • Muricauda oceani sp. nov., isolated from the East Pacific Ocean
    Bingxia Dong, Sidong Zhu, Ting Chen, Na Ren, Xiunuan Chen, Yong Chen, Zehao Xue, Xudong Shen, Yizhe Huang, Jifang Yang, Jigang Chen
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(6): 3839.     CrossRef
  • Sphingobium fluviale sp. nov., isolated from a river
    Shih-Yi Sheu, Ya-Ping Guo, Soon-Wo Kwon, Wen-Ming Chen
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(2): 827.     CrossRef
  • Characterization of Staphylococcus intermedius Group Isolates Associated with Animals from Antarctica and Emended Description of Staphylococcus delphini
    Veronika Vrbovská, Ivo Sedláček, Michal Zeman, Pavel Švec, Vojtěch Kovařovic, Ondrej Šedo, Monika Laichmanová, Jiří Doškař, Roman Pantůček
    Microorganisms.2020; 8(2): 204.     CrossRef
  • Variovorax beijingensis sp. nov., a novel plant-associated bacterial species with plant growth-promoting potential isolated from different geographic regions of Beijing, China
    Jun-lian Gao, Yu-chen Sun, Jing Xue, Pengbo Sun, Hui Yan, Mohammad Sayyar Khan, Li-wei Wang, Xiuhai Zhang, Jian-guang Sun
    Systematic and Applied Microbiology.2020; 43(6): 126135.     CrossRef
  • Aliikangiella coralliicola sp. nov., a bacterium isolated from coral Porites lutea, and proposal of Pleioneaceae fam. nov. to accommodate Pleionea and Aliikangiella
    Guanghua Wang, Ge Dang, Shuailiang Xu, Jianfeng Liu, Hongfei Su, Jiayuan Liang, Wen Huang, Yinghui Wang, Kefu Yu
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(11): 5880.     CrossRef
  • Jeotgalibaca ciconiae sp. nov., isolated from the faeces of an Oriental stork
    So-Yeon Lee, Woorim Kang, Pil Soo Kim, Hyun Sik Kim, Hojun Sung, Na-Ri Shin, Ji-Hyun Yun, Jae-Yun Lee, June-Young Lee, Mi-Ja Jung, Yun-Seok Jeong, Euon Jung Tak, Jeong Eun Han, Dong-Wook Hyun, Myung-Suk Kang, Ki-Eun Lee, Byoung-Hee Lee, Jin-Woo Bae
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(5): 3247.     CrossRef
  • Aquabacterium lacunae sp. nov., isolated from a freshwater pond
    Wen-Ming Chen, Tzu-Ying Chen, Soon-Wo Kwon, Shih-Yi Sheu
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(4): 2888.     CrossRef
  • Zoogloea dura sp. nov., a N2-fixing bacterium isolated from forest soil and emendation of the genus Zoogloea and the species Zoogloea oryzae and Zoogloea ramigera
    Ram Hari Dahal, Dhiraj Kumar Chaudhary, Dong-Uk Kim, Jaisoo Kim
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(10): 5312.     CrossRef
  • Roseimaritima sediminicola sp. nov., a new member of Planctomycetaceae isolated from Chilika lagoon
    Dhanesh Kumar, Kumar Gaurav, Jagadeeshwari U, Deepshikha G, Sasikala Ch., Ramana Ch.V.
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(4): 2616.     CrossRef
  • Lactobacillus jinshani sp. nov., isolated from solid-state vinegar culture of Zhenjiang aromatic vinegar
    Yongjian Yu, Xin Li, Junhong Zhang, Li-Juan Chai, Zhen-Ming Lu, Zheng-Hong Xu
    Antonie van Leeuwenhoek.2020; 113(1): 43.     CrossRef
  • Aquirufa rosea sp. nov., isolated from a freshwater lake
    Shih-Yi Sheu, Tzu-Ying Chen, Wen-Ming Chen
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(5): 3145.     CrossRef
  • Staphylococcus borealis sp. nov., isolated from human skin and blood
    Maria Pain, Runa Wolden, Daniel Jaén-Luchoro, Francisco Salvà-Serra, Beatriz Piñeiro Iglesias, Roger Karlsson, Claus Klingenberg, Jorunn Pauline Cavanagh
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(12): 6067.     CrossRef
  • Exploring the Diversity Within the Genus Francisella – An Integrated Pan-Genome and Genome-Mining Approach
    Rajender Kumar, Jeanette E. Bröms, Anders Sjöstedt
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Mesonia oceanica sp. nov., isolated from oceans during the Tara oceans expedition, with a preference for mesopelagic waters
    Teresa Lucena, Isabel Sanz-Sáez, David R. Arahal, Silvia G. Acinas, Olga Sánchez, Carlos Pedrós-Alió, Rosa Aznar, María J. Pujalte
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(7): 4329.     CrossRef
  • Jiella pacifica sp. nov., isolated from the West Pacific Ocean
    Zehao Xue, Sidong Zhu, Xiunuan Chen, Ting Chen, Na Ren, Yong Chen, Bingxia Dong, Xudong Shen, Yizhe Huang, Jifang Yang, Jigang Chen
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(7): 4345.     CrossRef
  • Sphingomonas lacunae sp. nov., isolated from a freshwater pond
    Shih-Yi Sheu, Che-Chia Yang, Der-Shyan Sheu, Jyh-Ming Tsai, Wen-Ming Chen
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(11): 5899.     CrossRef
  • Bradymonabacteria, a novel bacterial predator group with versatile survival strategies in saline environments
    Da-Shuai Mu, Shuo Wang, Qi-Yun Liang, Zhao-Zhong Du, Renmao Tian, Yang Ouyang, Xin-Peng Wang, Aifen Zhou, Ya Gong, Guan-Jun Chen, Joy Van Nostrand, Yunfeng Yang, Jizhong Zhou, Zong-Jun Du
    Microbiome.2020;[Epub]     CrossRef
  • Gemmobacter aquarius sp. nov., Runella rosea sp. nov. and Flavobacterium fluviale sp. nov., isolated from the Namhangang River system
    Min-gyung Baek, Su-Kyoung Shin, Hana Yi
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(11): 5640.     CrossRef
  • Sphingobacterium endophyticum sp. nov., a novel endophyte isolated from halophyte
    Yang-Yang Liu, Fang Liu, Yu-Qian Li, Rui-Feng Lei, Qin Ma, Manik Prabhu Narsing Rao, Dilireba Abudourousuli, Zulihumaer Rouzi, Muyesaier Aosiman, Deng-Di An, Wen-Jun Li
    Archives of Microbiology.2020; 202(10): 2771.     CrossRef
  • Sphingomonas montanisoli sp. nov., isolated from mountain soil
    Zixiao Xu, Yuxiao Zhang, Yasir Muhammad, Gejiao Wang
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(6): 3606.     CrossRef
  • Out of the Abyss: Genome and Metagenome Mining Reveals Unexpected Environmental Distribution of Abyssomicins
    Alba Iglesias, Adriel Latorre-Pérez, James E. M. Stach, Manuel Porcar, Javier Pascual
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Pseudomonas xionganensis sp. nov., isolated from Baiyangdian Lake in Xiong'an New Area
    Yingying Zhao, Yunzhen Yang, Fei He, Chao Wang, Jie Feng, Xiumin Zhang
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(12): 6052.     CrossRef
  • Massilia aquatica sp. nov., Isolated from a Subtropical Stream in China
    Hui-Bin Lu, Tong-Chu Deng, Mei-Ying Xu
    Current Microbiology.2020; 77(10): 3185.     CrossRef
  • Duganella rivus sp. nov., Duganella fentianensis sp. nov., Duganella qianjiadongensis sp. nov. and Massilia guangdongensis sp. nov., isolated from subtropical streams in China and reclassification of all species within genus Pseudoduganella
    Hui-Bin Lu, Zhi-Peng Cai, Yong-Gang Yang, Mei-Ying Xu
    Antonie van Leeuwenhoek.2020; 113(8): 1155.     CrossRef
  • Poritiphilus flavus gen. nov., sp. nov., a member of the family Flavobacteriaceae isolated from coral Porites lutea
    Guanghua Wang, Shuailiang Xu, Ge Dang, Jianfeng Liu, Hongfei Su, Biao Chen, Zhiheng Liao, Wen Huang, Jiayuan Liang, Yinghui Wang, Kefu Yu
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(11): 5620.     CrossRef
  • Sphingomonas edaphi sp. nov., a novel species isolated from beach soil in the Republic of Korea
    Hyungdong Kim, Geeta Chhetri, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(1): 522.     CrossRef
  • Thalassocella blandensis gen. nov., sp. nov., a novel member of the family Cellvibrionaceae
    Teresa Lucena, David R. Arahal, Isabel Sanz-Sáez, Silvia G. Acinas, Olga Sánchez, Rosa Aznar, Carlos Pedrós-Alió, María J. Pujalte
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(2): 1231.     CrossRef
  • Hymenobacter terrestris sp. nov. and Hymenobacter lapidiphilus sp. nov., isolated from regoliths in Antarctica
    Ivo Sedláček, Roman Pantůček, Michal Zeman, Pavla Holochová, Ondrej Šedo, Eva Staňková, Pavel Švec, Stanislava Králová, Petra Vídeňská, Lenka Micenková, Urvashi, Suresh Korpole, Rup Lal
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(12): 6364.     CrossRef
  • Reclassification of genus Izhakiella into the family Erwiniaceae based on phylogenetic and genomic analyses
    Lingmin Jiang, Dexin Wang, Ji-Sun Kim, Ju Huck Lee, Dae-Hyuk Kim, Suk Weon Kim, Jiyoung Lee
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(5): 3541.     CrossRef
  • Orrella amnicola sp. nov., isolated from a freshwater river, reclassification of Algicoccus marinus as Orrella marina comb. nov., and emended description of the genus Orrella
    Shih-Yi Sheu, Li-Chu Chen, Che-Chia Yang, Aurelien Carlier, Wen-Ming Chen
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(12): 6381.     CrossRef
  • Allorhizobium terrae sp. nov., isolated from paddy soil, and reclassification of Rhizobium oryziradicis (Zhao et al. 2017) as Allorhizobium oryziradicis comb. nov.
    Shih-Yao Lin, Asif Hameed, Hsin-I Huang, Chiu-Chung Young
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(1): 397.     CrossRef
  • Antrihabitans stalactiti gen. nov., sp. nov., a new member of the family Nocardiaceae isolated from a cave
    Soon Dong Lee, In Seop Kim, Susanne Verbarg, Yochan Joung
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(10): 5503.     CrossRef
  • Methylobacterium terricola sp. nov., a gamma radiation-resistant bacterium isolated from gamma ray-irradiated soil
    Jiyoun Kim, Geeta Chhetri, Inhyup Kim, Byungjo Lee, Wonhee Jang, Myung Kyum Kim, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(4): 2449.     CrossRef
  • Pseudomonas leptonychotis sp. nov., isolated from Weddell seals in Antarctica
    Dana Nováková, Pavel Švec, Michal Zeman, Hans-Jürgen Busse, Ivana Mašlaňová, Roman Pantůček, Stanislava Králová, Lucie Krištofová, Ivo Sedláček
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(1): 302.     CrossRef
  • Tichowtungia aerotolerans gen. nov., sp. nov., a novel representative of the phylum Kiritimatiellaeota and proposal of Tichowtungiaceae fam. nov., Tichowtungiales ord. nov. and Tichowtungiia class. nov.
    Da-Shuai Mu, Liu-Yan Zhou, Qi-Yun Liang, Guan-Jun Chen, Zong-Jun Du
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(9): 5001.     CrossRef
  • Alcanivorax sediminis sp. nov., isolated from deep-sea sediment of the Pacific Ocean
    Xianzhi Liao, Qiliang Lai, Junpeng Yang, Chunming Dong, Dengfeng Li, Zongze Shao
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(7): 4280.     CrossRef
  • Oleiharenicola lentus sp. nov., isolated from irrigation water
    Wen-Ming Chen, Tzu-Ying Chen, Che-Chia Yang, Shih-Yi Sheu
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(5): 3440.     CrossRef
  • Aestuariirhabdus litorea gen. nov., sp. nov., isolated from a sea tidal flat and proposal of Aestuariirhabdaceae fam. nov.
    Shehzad Abid Khan, Hye Su Jung, Hyung Min Kim, Jeill Oh, Sang-Suk Lee, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(4): 2239.     CrossRef
  • Larkinella punicea sp. nov., isolated from manganese mine soil
    Zijie Zhou, Lin Zhu, Yixuan Dong, Xian Xia, Shijuan Wu, Gejiao Wang
    Archives of Microbiology.2020; 202(9): 2517.     CrossRef
  • Persicimonas caeni gen. nov., sp. nov., the Representative of a Novel Wide-Ranging Predatory Taxon in Bradymonadales
    Shuo Wang, Dashuai Mu, Zong-Jun Du
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Distribution and conservation of known secondary metabolite biosynthesis gene clusters in the genomes of geographically diverse Microcystis aeruginosa strains
    Leanne A. Pearson, Nicholas D. Crosbie, Brett A. Neilan
    Marine and Freshwater Research.2020; 71(5): 701.     CrossRef
  • Terricaulis silvestris gen. nov., sp. nov., a novel prosthecate, budding member of the family Caulobacteraceae isolated from forest soil
    Selma Vieira, Javier Pascual, Christian Boedeker, Alicia Geppert, Thomas Riedel, Manfred Rohde, Jörg Overmann
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(9): 4966.     CrossRef
  • Description of Azotobacter chroococcum subsp. isscasi subsp. nov. isolated from paddy soil and establishment of Azotobacter chroococcum subsp. chroococcum subsp. nov.
    Haiyang Jin, Hui Wang, Yanhui Zhang, Tianlong Hu, Zhibin Lin, Benjuan Liu, Jing Ma, Xiaojie Wang, Qi Liu, Xingwu Lin, Zubin Xie
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(3): 2124.     CrossRef
  • Gracilibacillus oryzae sp. nov., isolated from rice seeds
    Shan-Wen He, Xing Wang, He-Bao Guo, Ji-Gang Han, Kyu Kyu Thin, Ju-sheng Gao, Li-An Ma, Xiao-Xia Zhang
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(10): 5467.     CrossRef
  • Senegalimassilia faecalis sp. nov., an anaerobic actinobacterium isolated from human faeces, and emended description of the genus Senegalimassilia
    Kook-Il Han, Ji-Sun Kim, Keun Chul Lee, Mi Kyung Eom, Min Kuk Suh, Han Sol Kim, Seung-Hwan Park, Ju Huck Lee, Se Won Kang, Jam-Eon Park, Byeong Seob Oh, Seung Yeob Yu, Seung-Hyeon Choi, Dong Ho Lee, Hyuk Yoon, Byung-Yong Kim, Je Hee Lee, Jung-Sook Lee
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(3): 1684.     CrossRef
  • Limnobacter alexandrii sp. nov., a thiosulfate-oxidizing, heterotrophic and EPS-bearing Burkholderiaceae isolated from cultivable phycosphere microbiota of toxic Alexandrium catenella LZT09
    Yuhan Duan, Zhiwei Jiang, Zheng Wu, Zhi Sheng, Xi Yang, Jingya Sun, Xiaoling Zhang, Qiao Yang, Xinwei Yu, Jianbo Yan
    Antonie van Leeuwenhoek.2020; 113(11): 1689.     CrossRef
  • Alteromonas profundi sp. nov., isolated from the Indian Ocean
    Xudong Shen, Sidong Zhu, Bingxia Dong, Yong Chen, Zehao Xue, Na Ren, Ting Chen, Xiunuan Chen, Jifang Yang, Jigang Chen
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(8): 4531.     CrossRef
  • Wenzhouxiangella limi sp. nov., isolated from a salt lake
    Xiao-Yu Zhang, Rui Zhang, Jia-Cheng Wang, Ting Zhang, Zong-Jun Du
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(8): 4610.     CrossRef
  • Hymenobacter ginkgonis sp. nov., isolated from bark of Ginkgo biloba
    Inseong Cha, Heeyoung Kang, Haneul Kim, Seokhyeon Bae, Kiseong Joh
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(8): 4760.     CrossRef
  • Maribacter luteus sp. nov., a marine bacterium isolated from intertidal sand of the Yellow Sea
    Ang Liu, Yan-Jiao Zhang, De-Kun Liu, Xiu-Zhen Li
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(5): 3497.     CrossRef
  • Cryobacterium soli sp. nov., isolated from forest soil
    Chunjie Gong, Qiliang Lai, Hanfeng Cai, Yanming Jiang, Hu Liao, Yunfei Liu, Dongsheng Xue
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(1): 675.     CrossRef
  • Flavobacterium supellecticarium sp. nov., isolated from an abandoned construction timber
    Shih-Yao Lin, Wen-Ming Chen, Guan-Hua Huang, Asif Hameed, Chun-Tse Chang, Chia-Fang Tsai, Chiu-Chung Young
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(6): 3731.     CrossRef
  • Rubrivivax albus sp. nov., isolated from a freshwater pond
    Shih-Yi Sheu, Zhi-Hao Li, Chiu-Chung Young, Wen-Ming Chen
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(2): 805.     CrossRef
  • Tabrizicola oligotrophica sp. nov. and Rhodobacter tardus sp. nov., two new species of bacteria belonging to the family Rhodobacteraceae
    Ceshing Sheu, Zhi-Hao Li, Shih-Yi Sheu, Che-Chia Yang, Wen-Ming Chen
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(12): 6266.     CrossRef
  • Spirosoma telluris sp. nov. and Spirosoma arboris sp. nov. isolated from soil and tree bark, respectively
    Heeyoung Kang, Inseong Cha, Haneul Kim, Kiseong Joh
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(10): 5355.     CrossRef
  • Devosia indica sp. nov., isolated from surface seawater in the Indian Ocean
    Danqiu Lin, Yizhe Huang, Yong Chen, Sidong Zhu, Jifang Yang, Jigang Chen
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(1): 340.     CrossRef
  • Brevilactibacter flavus gen. nov., sp. nov., a novel bacterium of the family Propionibacteriaceae isolated from raw milk and dairy products and reclassification of Propioniciclava sinopodophylli as Brevilactibacter sinopodophylli comb. nov.
    Mareike Wenning, Franziska Breitenwieser, Christopher Huptas, Etienne Doll, Benedikt Bächler, Annika Schulz, Andreas Dunkel, Thomas Hofmann, Mario von Neubeck, Hans-Jürgen Busse, Siegfried Scherer
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(4): 2186.     CrossRef
  • Ideonella livida sp. nov., isolated from a freshwater lake
    Wen-Ming Chen, Li-Chu Chen, Der-Shyan Sheu, Jyh-Ming Tsai, Shih-Yi Sheu
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(9): 4942.     CrossRef
  • Jejubacter calystegiae gen. nov., sp. nov., moderately halophilic, a new member of the family Enterobacteriaceae, isolated from beach morning glory
    Lingmin Jiang, Dexin Wang, Jung-Sook Lee, Dae-Hyuk Kim, Jae Cheol Jeong, Cha Young Kim, Suk Weon Kim, Jiyoung Lee
    Journal of Microbiology.2020; 58(5): 357.     CrossRef
  • Hymenobacter setariae sp. nov., isolated from the ubiquitous weedy grass Setaria viridis
    Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Hyungdong Kim, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(6): 3724.     CrossRef
  • Geomonas soli gen. nov., sp. nov., a New Member of the Family Comamonadaceae, Isolated from Soil
    Shehzad Abid Khan, Sang Eun Jeong, Hye Yoon Park, Sang-Suk Lee, Che Ok Jeon
    Current Microbiology.2020; 77(2): 286.     CrossRef
  • Arenibacter lacus sp. nov., Isolated from Chilika Lagoon, India
    Dhanesh Kumar, Nandardhane Smita, Gaurav Kumar, Gandham Suresh, Uppada Jagadeeshwari, Chintalapati Sasikala, Chintalapati Venkata Ramana
    Current Microbiology.2020; 77(12): 4152.     CrossRef
  • Adhaeribacter arboris sp. nov., and Adhaeribacter pallidiroseus sp. nov., novel bacteria isolated from birch tree (Betula platyphylla)
    Heeyoung Kang, Haneul Kim, Inseong Cha, Kiseong Joh
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(12): 6195.     CrossRef
  • Sphingobium algorifonticola sp. nov., isolated from a cold spring
    Wen-Ming Chen, Ya-Ping Guo, Ceshing Sheu, Shih-Yi Sheu
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(1): 309.     CrossRef
  • Distribution of Phototrophic Purple Nonsulfur Bacteria in Massive Blooms in Coastal and Wastewater Ditch Environments
    Akira Hiraishi, Nobuyoshi Nagao, Chinatsu Yonekawa, So Umekage, Yo Kikuchi, Toshihiko Eki, Yuu Hirose
    Microorganisms.2020; 8(2): 150.     CrossRef
  • Rhodovarius crocodyli sp. nov., isolated from a crocodile pond
    Wen-Ming Chen, Yi-Ru Xie, Der-Shyan Sheu, Jyh-Ming Tsai, Shih-Yi Sheu
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(9): 5141.     CrossRef
  • Description of Azoarcus nasutitermitis sp. nov. and Azoarcus rhizosphaerae sp. nov., two nitrogen-fixing species isolated from termite nest and rhizosphere of Ficus religiosa
    Shih-Yao Lin, Asif Hameed, Chia-Fang Tsai, Guan-Hua Huang, Yi-Han Hsu, Chiu-Chung Young
    Antonie van Leeuwenhoek.2020; 113(7): 933.     CrossRef
  • Cohnella fermenti sp. nov., isolated from a fermentation process
    Shih-Yao Lin, Wen-Ming Chen, Asif Hameed, Guan-Hua Huang, Mei-Hua Hung, Chiu-Chung Young
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(4): 2602.     CrossRef
  • Gimesia chilikensis sp. nov., a haloalkali-tolerant planctomycete isolated from Chilika lagoon and emended description of the genus Gimesia
    Dhanesh Kumar, Kumar Gaurav, Sreya PK, Shabbir A., Jagadeeshwari Uppada, Sasikala Ch., Ramana Ch.V.
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(6): 3647.     CrossRef
  • Salinibius halmophilus gen. nov., sp. nov., isolated from a marine solar saltern
    Si-Kai Ling, Hui Zhang, Nan-Nan Wang, Guan-Jun Chen, Zong-Jun Du
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(2): 1079.     CrossRef
  • Metagenomic profiling of ammonia- and methane-oxidizing microorganisms in two sequential rapid sand filters
    Lianna Poghosyan, Hanna Koch, Jeroen Frank, Maartje A.H.J. van Kessel, Geert Cremers, Theo van Alen, Mike S.M. Jetten, Huub J.M. Op den Camp, Sebastian Lücker
    Water Research.2020; 185: 116288.     CrossRef
  • “ Candidatus Desulfobulbus rimicarensis,” an Uncultivated Deltaproteobacterial Epibiont from the Deep-Sea Hydrothermal Vent Shrimp Rimicaris exoculata
    Lijing Jiang, Xuewen Liu, Chunming Dong, Zhaobin Huang, Marie-Anne Cambon-Bonavita, Karine Alain, Li Gu, Shasha Wang, Zongze Shao, Shuang-Jiang Liu
    Applied and Environmental Microbiology.2020;[Epub]     CrossRef
  • Nocardioides convexus sp. nov. and Nocardioides anomalus sp. nov., isolated from soil and mineral water
    Yuna Park, Qingzhen Liu, Soohyun Maeng, Won Jung Choi, Yoonjee Chang, Wan-Taek Im
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(12): 6402.     CrossRef
  • Mesorhizobium alexandrii sp. nov., isolated from phycosphere microbiota of PSTs-producing marine dinoflagellate Alexandrium minutum amtk4
    Xi Yang, Zhiwei Jiang, Jing Zhang, Xin Zhou, Xiaoling Zhang, Lei Wang, Ting Yu, Zhilin Wang, Jinlong Bei, Bo Dong, Zhangyan Dai, Qiao Yang, Zhuang Chen
    Antonie van Leeuwenhoek.2020; 113(7): 907.     CrossRef
  • Description of Massilia rubra sp. nov., Massilia aquatica sp. nov., Massilia mucilaginosa sp. nov., Massilia frigida sp. nov., and one Massilia genomospecies isolated from Antarctic streams, lakes and regoliths
    Pavla Holochová, Ivana Mašlaňová, Ivo Sedláček, Pavel Švec, Stanislava Králová, Vojtěch Kovařovic, Hans-Jürgen Busse, Eva Staňková, Miloš Barták, Roman Pantůček
    Systematic and Applied Microbiology.2020; 43(5): 126112.     CrossRef
  • Paradesulfovibrio onnuriensis gen. nov., sp. nov., a chemolithoautotrophic sulfate-reducing bacterium isolated from the Onnuri vent field of the Indian Ocean and reclassification of Desulfovibrio senegalensis as Paradesulfovibrio senegalensis comb. nov.
    Yun Jae Kim, Jhung-Ahn Yang, Jae Kyu Lim, Mi-Jeong Park, Sung-Hyun Yang, Hyun Sook Lee, Sung Gyun Kang, Jung-Hyun Lee, Kae Kyoung Kwon
    Journal of Microbiology.2020; 58(4): 252.     CrossRef
  • Litorilituus lipolyticus sp. nov., isolated from intertidal sand of the Yellow Sea in China, and emended description of Colwellia asteriadis
    Ang Liu, Yan-Jiao Zhang, Qing-Jie Xue, Hui Wang, Yuan-Yuan Yang, Feng Du, Long-Yu Zhao, Hong-Hua Zhang, Yun-Qing Li, Xiu-Zhen Li
    Antonie van Leeuwenhoek.2020; 113(4): 449.     CrossRef
  • Wocania indica gen. nov., sp. nov., isolated from deep sea hydrothermal sulfide in the northwest Indian Ocean, and proposal to reclassify Flaviramulus ichthyoenteri as Wocania ichthyoenteri comb. nov.
    Yang He, Xiang Zeng, Jinbo Xiong, Qiliang Lai, Jianyang Li, Zongze Shao
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(10): 5488.     CrossRef
  • Whole genome analysis calls for a taxonomic rearrangement of the genus Colwellia
    Ang Liu, Yan-Jiao Zhang, Peng Cheng, Ya-Jie Peng, Jochen Blom, Qing-Jie Xue
    Antonie van Leeuwenhoek.2020; 113(7): 919.     CrossRef
  • Leeia aquatica sp. nov., isolated from freshwater
    Jaeho Song, Yochan Joung, Shan-Hui Li, Juchan Hwang, Jang-Cheon Cho
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(11): 5848.     CrossRef
  • Aurantiacibacter rhizosphaerae sp. nov., isolated from a rhizosphere mudflat of a halophyte and proposal to reclassify Erythrobacter suaedae Lee et al. 2019. and Erythrobacter flavus Yoon et al. 2003 as Aurantiacibacter suaedae comb. nov. and
    Soon Dong Lee, In Seop Kim
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(12): 6257.     CrossRef
  • Hydrogen and Carbon Monoxide-Utilizing Kyrpidia spormannii Species From Pantelleria Island, Italy
    Carmen Hogendoorn, Arjan Pol, Nunzia Picone, Geert Cremers, Theo A. van Alen, Antonina L. Gagliano, Mike S. M. Jetten, Walter D’Alessandro, Paola Quatrini, Huub J. M. Op den Camp
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Fundicoccus ignavus gen. nov., sp. nov., a novel genus of the family Aerococcaceae isolated from bulk tank milk
    Annemarie Siebert, Christopher Huptas, Mareike Wenning, Siegfried Scherer, Etienne V. Doll
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(8): 4774.     CrossRef
  • Flammeovirga pectinis sp. nov., isolated from the gut of the Korean scallop, Patinopecten yessoensis
    Yun-Seok Jeong, Woorim Kang, Hojun Sung, June-Young Lee, Ji-Hyun Yun, Na-Ri Shin, Hyun Sik Kim, So-Yeon Lee, Jeong Eun Han, Jae-Yun Lee, Euon Jung Tak, Pil Soo Kim, Dong-Wook Hyun, Mi-Ja Jung, Tae Woong Whon, Myung-Suk Kang, Ki-Eun Lee, Byoung-Hee Lee, Ji
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(1): 499.     CrossRef
  • High counts of thermophilic spore formers in dairy powders originate from persisting strains in processing lines
    Anna Dettling, Carolin Wedel, Christopher Huptas, Jörg Hinrichs, Siegfried Scherer, Mareike Wenning
    International Journal of Food Microbiology.2020; 335: 108888.     CrossRef
  • Paenibacillus lycopersici sp. nov. and Paenibacillus rhizovicinus sp. nov., isolated from the rhizosphere of tomato (Solanum lycopersicum)
    Shin Ae Lee, Tae-Wan Kim, Jun Heo, Mee-Kyung Sang, Jaekyeong Song, Soon-Wo Kwon, Hang-Yeon Weon
    Journal of Microbiology.2020; 58(10): 832.     CrossRef
  • Cerasibacillus terrae sp. nov., isolated from maize field, and emended description of Cerasibacillus quisquiliarum Nakamura et al. 2004
    Shih-Yao Lin, Chia-Fang Tsai, Asif Hameed, Chiu-Chung Young
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(11): 5725.     CrossRef
  • Microbial community composition and functional potential in Bothnian Sea sediments is linked to Fe and S dynamics and the quality of organic matter
    Olivia Rasigraf, Niels A. G. M. van Helmond, Jeroen Frank, Wytze K. Lenstra, Matthias Egger, Caroline P. Slomp, Mike S. M. Jetten
    Limnology and Oceanography.2020;[Epub]     CrossRef
  • Metagenomic Association Analysis of Gut Symbiont Limosilactobacillus reuteri Without Host-Specific Genome Isolation
    Sein Park, Martin Steinegger, Ho-Seong Cho, Jongsik Chun
    Frontiers in Microbiology.2020;[Epub]     CrossRef
  • Methylobacterium symbioticum sp. nov., a new species isolated from spores of Glomus iranicum var. tenuihypharum
    Jose Antonio Pascual, Margarita Ros, Jesus Martínez, Francisco Carmona, Antonio Bernabé, Rocío Torres, Teresa Lucena, Rosa Aznar, David R. Arahal, Felix Fernández
    Current Microbiology.2020; 77(9): 2031.     CrossRef
  • Sphingomonas solaris sp. nov., isolated from a solar panel in Boston, Massachusetts
    Kristie Tanner, Christopher P. Mancuso, Juli Peretó, Ahmad S. Khalil, Cristina Vilanova, Javier Pascual
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(3): 1814.     CrossRef
  • Adhaeribacter rhizoryzae sp. nov., a fibrillar matrix-producing bacterium isolated from the rhizosphere of rice plant
    Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Byungjo Lee, Wonhee Jang, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(10): 5382.     CrossRef
  • Genomic Comparison of Insect Gut Symbionts from Divergent Burkholderia Subclades
    Kazutaka Takeshita, Yoshitomo Kikuchi
    Genes.2020; 11(7): 744.     CrossRef
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    International Journal of Systematic and Evolutionary Microbiology .2020; 70(6): 3801.     CrossRef
  • Description of Maribellus sediminis sp. nov., a marine nitrogen-fixing bacterium isolated from sediment of cordgrass and mangrove
    Zhaobin Huang, Yuzhong Hu, Qiliang Lai, Yu Guo
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  • Ningiella ruwaisensis gen. nov., sp. nov., a member of the family Alteromonadaceae isolated from marine water of the Arabian Gulf
    Rashmi Fotedar, Matthew E. Caldwell, Krithivasan Sankaranarayanan, Aisha Al -Zeyara, Ameena Al-Malki, Ridhima Kaul, Masoud Al Marri, Hamad S. Al -Shamari, Paul A. Lawson
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  • Maribacter algicola sp. nov., isolated from a marine red alga, Porphyridium marinum, and transfer of Maripseudobacter aurantiacus Chen et al. 2017 to the genus Maribacter as Maribacter aurantiacus comb. nov.
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    Mauricio Chalita, Sung-min Ha, Yeong Ouk Kim, Hyun-Seok Oh, Seok-Hwan Yoon, Jongsik Chun
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  • Klebsiella indica sp. nov., isolated from the surface of a tomato
    Sukriti Gujarati, Diptaraj Chaudhari, Ashwini Hagir, Mitesh Khairnar, Yogesh Shouche, Praveen Rahi
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(5): 3278.     CrossRef
  • Cupriavidus agavae sp. nov., a species isolated from Agave L. rhizosphere in northeast Mexico
    Ivan Arroyo-Herrera, Jessica Maldonado-Hernández, Fernando-Uriel Rojas-Rojas, Georgina Meza-Radilla, Violeta Larios-Serrato, María-Soledad Vásquez-Murrieta, William B. Whitman, Paulina Estrada-de los Santos
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(7): 4165.     CrossRef
  • Filimonas effusa sp. nov., isolated from a freshwater river
    Wen-Ming Chen, Tzu-Ying Chen, Zhi-Hao Li, Soon-Wo Kwon, Shih-Yi Sheu
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(3): 1508.     CrossRef
  • Duganella lactea sp. nov., Duganella guangzhouensis sp. nov., Duganella flavida sp. nov. and Massilia rivuli sp. nov., isolated from a subtropical stream in PR China and proposal to reclassify Duganella ginsengisoli as Massilia ginsengisoli c
    Huibin Lu, Tongchu Deng, Feifei Liu, Yonghong Wang, Xunan Yang, Meiying Xu
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(8): 4822.     CrossRef
  • Genome-based reclassification of Paenibacillus jamilae Aguilera et al. 2001 as a later heterotypic synonym of Paenibacillus polymyxa (Prazmowski 1880) Ash et al. 1994
    Min-Jung Kwak, Seon-Bin Choi, Sung-min Ha, Eun Hye Kim, Byung-Yong Kim, Jongsik Chun
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  • Aequoribacter fuscus gen. nov., sp. nov., a new member of the family Halieaceae, isolated from coastal seawater
    Shan-Hui Li, Jaeho Song, Ilnam Kang, Juchan Hwang, Jang-Cheon Cho
    Journal of Microbiology.2020; 58(6): 463.     CrossRef
  • Psychroflexus maritimus sp. nov., isolated from coastal sediment
    Yan-Lin Zhong, Rui Zhang, Xiao-Yu Zhang, Li-Xue Yu, Meng-Fan Zhao, Zong-Jun Du
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  • Ketobacter nezhaii sp. nov., a marine bacterium isolated from coastal sediment
    Jianyang Li, Mingming Qi, Qiliang Lai, Xianhua Liu, Zongze Shao
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(9): 4960.     CrossRef
  • Sphingobacterium chungjuense sp. nov., isolated from a freshwater lake
    Jaeho Song, Yochan Joung, Shan-Hui Li, Juchan Hwang, Jang-Cheon Cho
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(12): 6126.     CrossRef
  • Paracoccus xiamenensis sp. nov., isolated from seawater on the Xiamen
    Lina Lyu, Bin Zhi, Qiliang Lai, Zongze Shao, Zhiqiang Yu
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(7): 4285.     CrossRef
  • Paludisphaera soli sp. nov., a new member of the family Isosphaeraceae isolated from high altitude soil in the Western Himalaya
    Rishabh Kaushik, Meesha Sharma, Kumar Gaurav, U. Jagadeeshwari, A. Shabbir, Ch. Sasikala, Ch. V. Ramana, Maharaj K. Pandit
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  • Lacibacter luteus sp. nov., isolated from a freshwater river
    Shih-Yi Sheu, Tzu-Ying Chen, Soon-Wo Kwon, Wen-Ming Chen
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(2): 1404.     CrossRef
  • Flavobacterium ichthyis sp. nov., isolated from a fish pond
    Wen-Ming Chen, Che-Chia Yang, Ceshing Sheu, Soon-Wo Kwon, Shih-Yi Sheu
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(9): 5075.     CrossRef
  • Mucilaginibacter agri sp. nov. and Mucilaginibacter humi sp. nov., isolated from soil
    Ye Lin Seo, Shehzad Abid Khan, Hyung Min Kim, Byung Hee Chun, Dong Min Han, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(8): 4616.     CrossRef
  • Ferrimonas sediminicola sp. nov. and Ferrimonas aestuarii sp. nov., Fe(III)-reducing bacteria isolated from marine environments
    Juchan Hwang, Jaeho Song, Yeonjung Lim, Yochan Joung, Jang-Cheon Cho
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(9): 4927.     CrossRef
  • Patiriisocius marinistellae gen. nov., sp. nov., isolated from the starfish Patiria pectinifera, and reclassification of Ulvibacter marinus as a member of the genus Patiriisocius comb. nov.
    Keisuke Kawano, Natsumi Ushijima, Minoru Kihara, Hideomi Itoh
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(7): 4119.     CrossRef
  • Integration of culture-dependent and independent methods provides a more coherent picture of the pig gut microbiome
    Gavin J Fenske, Sudeep Ghimire, Linto Antony, Jane Christopher-Hennings, Joy Scaria
    FEMS Microbiology Ecology.2020;[Epub]     CrossRef
  • Pseudomonas karstica sp. nov. and Pseudomonas spelaei sp. nov., isolated from calcite moonmilk deposits from caves
    Pavel Švec, Marcel Kosina, Michal Zeman, Pavla Holochová, Stanislava Králová, Eva Němcová, Lenka Micenková, Urvashi, Vipin Gupta, Utkarsh Sood, Rup Lal, Suresh Korpole, Ivo Sedláček
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  • Extremophilic nitrite-oxidizing Chloroflexi from Yellowstone hot springs
    Eva Spieck, Michael Spohn, Katja Wendt, Eberhard Bock, Jessup Shively, Jeroen Frank, Daniela Indenbirken, Malik Alawi, Sebastian Lücker, Jennifer Hüpeden
    The ISME Journal.2020; 14(2): 364.     CrossRef
  • Novosphingobium ovatum sp. nov., isolated from a freshwater mesocosm
    Wen-Ming Chen, Cheng-Ye Cai, Der-Shyan Sheu, Jyh-Ming Tsai, Shih-Yi Sheu
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(10): 5243.     CrossRef
  • Sunxiuqinia indica sp. nov., isolated from deep sea
    Jianyang Li, Mingming Qi, Qiliang Lai, Guangyi Wang, Zongze Shao
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(7): 4186.     CrossRef
  • Saccharibacillus brassicae sp. nov., an endophytic bacterium isolated from kimchi cabbage (Brassica rapa subsp. pekinensis) seeds
    Lingmin Jiang, Chan Ju Lim, Song-Gun Kim, Jae Cheol Jeong, Cha Young Kim, Dae-Hyuk Kim, Suk Weon Kim, Jiyoung Lee
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  • Sphingorhabdus lacus sp. nov. and Sphingorhabdus profundilacus sp. nov., isolated from freshwater environments
    Miri Park, Ilsuk Jung, Jaeho Song, Jang-Cheon Cho
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(5): 3202.     CrossRef
  • Novosphingobium umbonatum sp. nov., isolated from a freshwater mesocosm
    Shih-Yi Sheu, Cheng-Ye Cai, Soon-Wo Kwon, Wen-Ming Chen
    International Journal of Systematic and Evolutionary Microbiology.2020; 70(2): 1122.     CrossRef
  • Pseudooceanicola pacificus sp. nov., isolated from deep-sea sediment of the Pacific Ocean
    Lina Lyu, Qiliang Lai, Jianyang Li, Zongze Shao, Zhiqiang Yu
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(7): 4372.     CrossRef
  • Halioglobus maricola sp. nov., isolated from coastal seawater
    Shan-Hui Li, Jaeho Song, Yeonjung Lim, Yochan Joung, Ilnam Kang, Jang-Cheon Cho
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  • Cryobacterium ruanii sp. nov. and Cryobacterium breve sp. nov., isolated from glaciers
    Qing Liu, Ji-Hui Tian, Hong-Can Liu, Yu-Guang Zhou, Yu-Hua Xin
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(3): 1918.     CrossRef
  • Prokaryotic sigma factors and their transcriptional counterparts in Archaea and Eukarya
    Ana G. Abril, Jose Luis R. Rama, A. Sánchez-Pérez, Tomás G. Villa
    Applied Microbiology and Biotechnology.2020; 104(10): 4289.     CrossRef
  • Nitratireductor alexandrii sp. nov., from phycosphere microbiota of toxic marine dinoflagellate Alexandrium tamarense
    Zhiwei Jiang, Yuhan Duan, Xi Yang, Bing Yao, Teer Zeng, Xiaoyan Wang, Qi Feng, Min Qi, Qiao Yang, Xiaoling Zhang
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  • Croceicoccus sediminis sp. nov., isolated from coastal sediment
    Zhaobin Huang, Aoqiang Zhang, Qiliang Lai, Jianjun Yuan
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(2): 779.     CrossRef
  • Signs of a phyllospheric lifestyle in the genome of the stress-tolerant strain Azospirillum brasilense Az19
    Julia E. García, Maria M. Labarthe, Luciana A. Pagnussat, Melina Amenta, Cecilia M. Creus, Guillermo A. Maroniche
    Systematic and Applied Microbiology.2020; 43(6): 126130.     CrossRef
  • Genomic, metabolic and phenotypic variability shapes ecological differentiation and intraspecies interactions of Alteromonas macleodii
    Hanna Koch, Nora Germscheid, Heike M. Freese, Beatriz Noriega-Ortega, Dominik Lücking, Martine Berger, Galaxy Qiu, Ezequiel M. Marzinelli, Alexandra H. Campbell, Peter D. Steinberg, Jörg Overmann, Thorsten Dittmar, Meinhard Simon, Matthias Wietz
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  • Reinekea thalattae sp. nov., a New Species of the Genus Reinekea Isolated from Surface Seawater in Sehwa Beach
    Inhyup Kim, Geeta Chhetri, Jiyoun Kim, Minchung Kang, Taegun Seo
    Current Microbiology.2020; 77(12): 4174.     CrossRef
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    Marike Palmer, Emma T. Steenkamp, Jochen Blom, Brian P. Hedlund, Stephanus N. Venter
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(4): 2937.     CrossRef
  • Rhizobium indicum sp. nov., isolated from root nodules of pea (Pisum sativum) cultivated in the Indian trans-Himalayas
    Praveen Rahi, Pranoti Giram, Diptaraj Chaudhari, George C. diCenzo, Shashi Kiran, Aastha Khullar, Mahima Chandel, Sayali Gawari, Anagha Mohan, Shraddha Chavan, Bhagyashree Mahajan
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    Zhaobin Huang, Yaping Du, Qiliang Lai, Zongze Shao
    Antonie van Leeuwenhoek.2019; 112(8): 1263.     CrossRef
  • Amniculibacterium aquaticum gen. nov., sp. nov., a new member of the family Flavobacteriaceae isolated from a stream
    Wen-Ming Chen, Ya-Ping Guo, Ceshing Sheu, Shih-Yi Sheu
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    Christina Ferousi, Simon Lindhoud, Frauke Baymann, Eric R. Hester, Joachim Reimann, Boran Kartal
    Journal of Biological Chemistry.2019; 294(45): 16953.     CrossRef
  • Flavobacterium piscinae sp. nov., isolated from a fish pond
    Wen-Ming Chen, Ya-Ping Guo, Soon-Wo Kwon, Shih-Yi Sheu
    International Journal of Systematic and Evolutionary Microbiology .2019; 69(6): 1775.     CrossRef
  • Description of Sphingobium psychrophilum sp. nov., a cold-adapted bacterium isolated from Arctic soil
    Ram Hari Dahal, Dhiraj Kumar Chaudhary, Dong-Uk Kim, Jaisoo Kim
    International Journal of Systematic and Evolutionary Microbiology .2019;[Epub]     CrossRef
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  • Sphingomonas crocodyli sp. nov., isolated from a crocodile pond
    Shih-Yi Sheu, Yi-Ru Xie, Soon-Wo Kwon, Ceshing Sheu, Wen-Ming Chen
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(7): 2153.     CrossRef
  • N-glycan Utilization by Bifidobacterium Gut Symbionts Involves a Specialist β-Mannosidase
    Rosa Lorizolla Cordeiro, Renan Augusto Siqueira Pirolla, Gabriela Felix Persinoti, Fábio Cesar Gozzo, Priscila Oliveira de Giuseppe, Mario Tyago Murakami
    Journal of Molecular Biology.2019; 431(4): 732.     CrossRef
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    Danyu Hu, Yang Zang, Yingjin Mao, Beile Gao
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Neobacillus endophyticus sp. nov., an endophytic bacterium isolated from Selaginella involvens roots
    Lingmin Jiang, Myoung Hui Lee, Jae Cheol Jeong, Dae-Hyuk Kim, Cha Young Kim, Suk Weon Kim, Jiyoung Lee
    International Journal of Systematic and Evolutionary Microbiology .2019;[Epub]     CrossRef
  • Stagnimonas aquatica gen. nov., sp. nov., a new member of the family Nevskiaceae isolated from a freshwater mesocosm
    Shih-Yi Sheu, Tzu-Ying Chen, Chiu-Chung Young, Wen-Ming Chen
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(6): 1606.     CrossRef
  • Hydrocarboniclastica marina gen. nov., sp. nov., a marine hydrocarbonoclastic bacterium isolated from an in situ enriched hydrocarbon-degrading consortium in sea sediment
    Chunming Dong, Tiantian Ma, Renju Liu, Qiliang Lai, Zongze Shao
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(8): 2250.     CrossRef
  • Anaerosacchariphilus polymeriproducens gen. nov., sp. nov., an anaerobic bacterium isolated from a salt field
    Wonduck Kim, Sung-Hyun Yang, Mi-Jeong Park, Jihye Oh, Jung-Hyun Lee, Kae Kyoung Kwon
    International Journal of Systematic and Evolutionary Microbiology .2019; 69(7): 1934.     CrossRef
  • Flavobacterium baculatum sp. nov., a carotenoid and flexirubin-type pigment producing species isolated from flooded paddy field
    Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Minchung Kang, Byungjo Lee, Wonhee Jang, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2019;[Epub]     CrossRef
  • Oceaniradius stylonematis gen. nov., sp. nov., isolated from a red alga, Stylonema cornu-cervi
    Sang Eun Jeong, Kyung Hyun Kim, Duckhyun Lhee, Hwan Su Yoon, Zhe-Xue Quan, En-Young Lee, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2019; 69(7): 1967.     CrossRef
  • Pradoshia eiseniae gen. nov., sp. nov., a spore-forming member of the family Bacillaceae capable of assimilating 3-nitropropionic acid, isolated from the anterior gut of the earthworm Eisenia fetida
    Tilak Saha, Vivek K. Ranjan, Sriradha Ganguli, Subarna Thakur, Biswanath Chakraborty, Partha Barman, Wriddhiman Ghosh, Ranadhir Chakraborty
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(5): 1265.     CrossRef
  • Rhizobium chutanense sp. nov., isolated from root nodules of Phaseolus vulgaris in China
    Yunyun Huo, Wenjun Tong, Juanjuan Wang, Fang Wang, Wenqing Bai, Entao Wang, Peng Shi, Weimin Chen, Gehong Wei
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(7): 2049.     CrossRef
  • Complete nitrification: insights into the ecophysiology of comammox Nitrospira
    Hanna Koch, Maartje A. H. J. van Kessel, Sebastian Lücker
    Applied Microbiology and Biotechnology.2019; 103(1): 177.     CrossRef
  • Paraburkholderia telluris sp. nov., isolated from subtropical forest soil
    Sen-yang Xiao, Zeng-hong Gao, Zi Yang, Jie-yi Bi, Li-hong Qiu
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(5): 1274.     CrossRef
  • Pseudorhodobacter turbinis sp. nov., isolated from the gut of the Korean turban shell, Turbo cornutus
    Yun-Seok Jeong, Woorim Kang, June-Young Lee, Hojun Sung, Hyun Sik Kim, Jeong-Eun Han, Euon Jung Tak, So-Yeon Lee, Jae-Yun Lee, Pil Soo Kim, Dong-Wook Hyun, Mi-Ja Jung, Jin-Woo Bae
    International Journal of Systematic and Evolutionary Microbiology .2019;[Epub]     CrossRef
  • Isolation and genome analysis of Winogradskyella algicola sp. nov., the dominant bacterial species associated with the green alga Dunaliella tertiolecta
    Jaeho Song, Yeonjung Lim, Hye-Jin Jang, Yochan Joung, Ilnam Kang, Seong-Joo Hong, Choul-Gyun Lee, Jang-Cheon Cho
    Journal of Microbiology.2019; 57(11): 982.     CrossRef
  • Jannaschia marina sp. nov., isolated from the gut of a gastropod, Onchidium reevesii
    Si Chen, Mengyuan He, Qiliang Lai, Ying Xu, Chenjing Shang
    International Journal of Systematic and Evolutionary Microbiology .2019;[Epub]     CrossRef
  • Allopseudarcicella aquatilis gen. nov., sp. nov., isolated from freshwater
    Haneul Kim, Heeyoung Kang, Kiseong Joh
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(11): 3574.     CrossRef
  • Paraburkholderia pallida sp. nov. and Paraburkholderia silviterrae sp. nov., isolated from forest soil
    Sen-yang Xiao, Zeng-hong Gao, Qin-hua Lin, Li-hong Qiu
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(12): 3777.     CrossRef
  • Aquincola rivuli sp. nov., isolated from a freshwater stream
    Shih-Yi Sheu, Tsai-Ying Hsieh, Wen-Ming Chen
    International Journal of Systematic and Evolutionary Microbiology .2019; 69(8): 2226.     CrossRef
  • Flavobacterium amnicola sp. nov., isolated from a sub-tropical stream
    Shih-Yi Sheu, Ya-Ping Guo, Wen-Ming Chen
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(8): 2283.     CrossRef
  • Shimia thalassica sp. nov., and reclassification of Pseudopelagicola gijangensis as Shimia gijangensis comb. nov., and Thalassobius activus as Cognatishimia activa comb. nov.
    David R. Arahal, Alexandra La Mura, Teresa Lucena, Lidia Rodrigo-Torres, Rosa Aznar, María J. Pujalte
    International Journal of Systematic and Evolutionary Microbiology .2019; 69(11): 3405.     CrossRef
  • Clostridium indicum sp. nov., a novel anaerobic bacterium isolated from the sludge of an industrial effluent
    Krishna Gundawar, Sumeeta Kumari, Shikha Sharma, Vishakha Grover, Prabhu B. Patil, Suresh Korpole
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(3): 672.     CrossRef
  • Peribacillus faecalis sp. nov., a moderately halophilic bacterium isolated from the faeces of a cow
    Lingmin Jiang, Won Yong Jung, Zhun Li, Mi-Kyung Lee, Seung-Hwan Park, Se Won Kang, Jung-Sook Lee, Hyunjung Jung, Tai-Young Hur, Hyeun Bum Kim, Jae-Kyung Kim, Ju-Hoon Lee, Ju Huck Lee, Jiyoung Lee
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  • Mucilaginibacter aquatilis sp. nov., Mucilaginibacter arboris sp. nov., and Mucilaginibacter ginkgonis sp. nov., novel bacteria isolated from freshwater and tree bark
    Heeyoung Kang, Haneul Kim, Seokhyeon Bae, Kiseong Joh
    International Journal of Systematic and Evolutionary Microbiology .2019;[Epub]     CrossRef
  • Devosia naphthalenivorans sp. nov., isolated from East Pacific Ocean sediment
    Yong Chen, Sidong Zhu, Danqiu Lin, Xing Wang, Jifang Yang, Jigang Chen
    International Journal of Systematic and Evolutionary Microbiology .2019; 69(7): 1974.     CrossRef
  • Parashewanella tropica sp. nov., a mesophilic bacterium isolated from a marine sponge from Chuuk lagoon, Federated States of Micronesia, and emended description of the genus Parashewanella
    Teddy Namirimu, Mi-Jeong Park, Sung-Hyun Yang, Young-Gun Zo, Kae Kyoung Kwon
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(10): 3256.     CrossRef
  • Histidinibacterium lentulum gen. nov., sp. nov., a marine bacterium from the culture broth of marine microalga Picochlorum sp. 122
    Guanghua Wang, Shuailiang Xu, Hongfei Su, Biao Chen, Jiayuan Liang, Wen Huang, Yinghui Wang, Kefu Yu
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(2): 578.     CrossRef
  • Apibacter muscae sp. nov., a novel bacterial species isolated from house flies
    Rahel Park, Maria C. Dzialo, Donat Nsabimana, Bart Lievens, Kevin J. Verstrepen
    International Journal of Systematic and Evolutionary Microbiology.2019; 69(11): 3586.     CrossRef
  • Pseudomonas nitrititolerans sp. nov., a nitrite-tolerant denitrifying bacterium isolated from a nitrification/denitrification bioreactor
    Ji-Sen Peng, Ying Liu, Lei Yan, Ting-Ting Hou, Hong-Can Liu, Yu-Guang Zhou, Zhi-Pei Liu
    International Journal of Systematic and Evolutionary Microbiology .2019; 69(8): 2471.     CrossRef
  • Geomonas oryzae gen. nov., sp. nov., Geomonas edaphica sp. nov., Geomonas ferrireducens sp. nov., Geomonas terrae sp. nov., Four Ferric-Reducing Bacteria Isolated From Paddy Soil, and Reclassification of Three Species of the Genus Geobacter as Members of
    Zhenxing Xu, Yoko Masuda, Hideomi Itoh, Natsumi Ushijima, Yutaka Shiratori, Keishi Senoo
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Comparative Genomic and Phylogenomic Analyses Clarify Relationships Within and Between Bacillus cereus and Bacillus thuringiensis: Proposal for the Recognition of Two Bacillus thuringiensis Genomovars
    Inwoo Baek, Kihyun Lee, Michael Goodfellow, Jongsik Chun
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Flavobacterium lotistagni sp. nov. and Flavobacterium celericrescens sp. nov., isolated from freshwater habitats
    Jia-Hong Wu, Ya-Xiu You, Chiu-Chung Young, Soon-Wo Kwon, Wen-Ming Chen
    International Journal of Systematic and Evolutionary Microbiology .2019;[Epub]     CrossRef
  • Proposal of Parashewanella gen. nov. to accommodate Parashewanella curva sp. nov. and Parashewanella spongiae comb. nov. in the Shewanellaceae
    Shuailiang Xu, Kefu Yu, Hongfei Su, Biao Chen, Wen Huang, Jiayuan Liang, Yinghui Wang, Guanghua Wang
    International Journal of Systematic and Evolutionary Microbiology .2019; 69(5): 1259.     CrossRef
  • Sulfitobacter profundi sp. nov., isolated from deep seawater
    Jaeho Song, Hye-Jin Jang, Yochan Joung, Ilnam Kang, Jang-Cheon Cho
    Journal of Microbiology.2019; 57(8): 661.     CrossRef
  • Lujinxingia litoralis gen. nov., sp. nov. and Lujinxingia sediminis sp. nov., two new representatives in the order Bradymonadales
    Ling-Yun Guo, Chang-Ming Li, Shuo Wang, Da-Shuai Mu, Zong-Jun Du
    International Journal of Systematic and Evolutionary Microbiology .2019; 69(9): 2767.     CrossRef
  • Syntrophotalea acetylenivorans sp. nov., a diazotrophic, acetylenotrophic anaerobe isolated from intertidal sediments
    Shaun M. Baesman, John M. Sutton, Janna L. Fierst, Denise M. Akob, Ronald S. Oremland
    International Journal of Systematic and Evolutionary Microbiology.2019;[Epub]     CrossRef
  • Adaptations of Alteromonas sp. 76-1 to Polysaccharide Degradation: A CAZyme Plasmid for Ulvan Degradation and Two Alginolytic Systems
    Hanna Koch, Heike M. Freese, Richard L. Hahnke, Meinhard Simon, Matthias Wietz
    Frontiers in Microbiology.2019;[Epub]     CrossRef
  • Sulfurovum indicum sp. nov., a novel hydrogen- and sulfur-oxidizing chemolithoautotroph isolated from a deep-sea hydrothermal plume in the Northwestern Indian Ocean
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Review
Minireview] Loop-mediated isothermal amplification (LAMP): principle, features, and future prospects
Tsugunori Notomi , Yasuyoshi Mori , Norihiro Tomita , Hidetoshi Kanda
J. Microbiol. 2015;53(1):1-5.   Published online January 4, 2015
DOI: https://doi.org/10.1007/s12275-015-4656-9
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AbstractAbstract
Loop-mediated isothermal amplification (LAMP), a newly developed gene amplification method, combines rapidity, simplicity, and high specificity. Several tests have been developed based on this method, and simplicity is maintained throughout all steps, from extraction of nucleic acids to detection of amplification. In the LAMP reaction, samples are amplified at a fixed temperature through a repetition of two types of elongation reactions occurring at the loop regions: self-elongation of templates from the stem loop structure formed at the 3'-terminal and the binding and elongation of new primers to the loop region. The LAMP reaction has a wide range of possible applications, including point-of-care testing, genetic testing in resource-poor settings (such as in developing countries), and rapid testing of food products and environmental samples.

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Research Support, Non-U.S. Gov't
Bacterial Endophyte Sphingomonas sp. LK11 Produces Gibberellins and IAA and Promotes Tomato Plant Growth
Abdul Latif Khan , Muhammad Waqas , Sang-Mo Kang , Ahmed Al-Harrasi , Javid Hussain , Ahmed Al-Rawahi , Salima Al-Khiziri , Ihsan Ullah , Liaqat Ali , Hee-Young Jung , In-Jung Lee
J. Microbiol. 2014;52(8):689-695.   Published online July 4, 2014
DOI: https://doi.org/10.1007/s12275-014-4002-7
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AbstractAbstract
Plant growth promoting endophytic bacteria have been identified as potential growth regulators of crops. Endophytic bacterium, Sphingomonas sp. LK11, was isolated from the leaves of Tephrosia apollinea. The pure culture of Sphingomonas sp. LK11 was subjected to advance chromatographic and spectroscopic techniques to extract and isolate gibberellins (GAs). Deuterated standards of [17, 17-2H2]-GA4, [17, 17-2H2]-GA9 and [17, 17-2H2]-GA20 were used to quantify the bacterial GAs. The analysis of the culture broth of Sphingomonas sp. LK11 revealed the existence of physiologically active gibberellins (GA4: 2.97 ± 0.11 ng/ml) and inactive GA9 (0.98 ± 0.15 ng/ml) and GA20 (2.41 ± 0.23). The endophyte also produced indole acetic acid (11.23 ± 0.93 μM/ml). Tomato plants inoculated with endophytic Sphingomonas sp. LK11 showed significantly increased growth attributes (shoot length, chlorophyll contents, shoot, and root dry weights) compared to the control. This indicated that such phyto-hormones-producing strains could help in increasing crop growth.

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Reviews
MINIREVIEW] The therapeutic applications of antimicrobial peptides (AMPs): a patent review
Hee-Kyoung Kang , Cheolmin Kim , Chang Ho Seo , Yoonkyung Park
J. Microbiol. 2017;55(1):1-12.   Published online December 30, 2016
DOI: https://doi.org/10.1007/s12275-017-6452-1
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AbstractAbstract
Antimicrobial peptides (AMPs) are small molecules with a broad spectrum of antibiotic activities against bacteria, yeasts, fungi, and viruses and cytotoxic activity on cancer cells, in addition to anti-inflammatory and immunomodulatory activities. Therefore, AMPs have garnered interest as novel therapeutic agents. Because of the rapid increase in drug-resistant pathogenic microorganisms, AMPs from synthetic and natural sources have been developed using alternative antimicrobial strategies. This article presents a broad analysis of patents referring to the therapeutic applications of AMPs since 2009. The review focuses on the universal trends in the effective design, mechanism, and biological evolution of AMPs.

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REVIEW] The Ruminococci: key symbionts of the gut ecosystem
Alex J. La Reau , Garret Suen
J. Microbiol. 2018;56(3):199-208.   Published online February 28, 2018
DOI: https://doi.org/10.1007/s12275-018-8024-4
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AbstractAbstract
Mammalian gut microbial communities form intricate mutualisms with their hosts, which have profound implications on overall health. One group of important gut microbial mutualists are bacteria in the genus Ruminococcus, which serve to degrade and convert complex polysaccharides into a variety of nutrients for their hosts. Isolated decades ago from the bovine rumen, ruminococci have since been cultured from other ruminant and non-ruminant sources, and next-generation sequencing has further shown their distribution to be widespread in a diversity of animal hosts. While most ruminococci that have been studied are those capable of degrading cellulose, much less is known about non-cellulolytic, nonruminant- associated species, such as those found in humans. Furthermore, a mechanistic understanding of the role of Ruminococcus spp. in their respective hosts is still a work in progress. This review highlights the broad work done on species within the genus Ruminococcus with respect to their physiology, phylogenetic relatedness, and their potential impact on host health.

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    Probiotics and Antimicrobial Proteins.2024; 16(4): 1240.     CrossRef
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    Animals.2024; 14(5): 787.     CrossRef
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    Актуальні проблеми сучасної медицини: Вісник Української медичної стоматологічної академії.2024; 24(1): 239.     CrossRef
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    Critical Reviews in Food Science and Nutrition.2024; 64(18): 6432.     CrossRef
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    José L. Fachi, Laís. P. Pral, Helder C. Assis, Sarah Oliveira, Vinícius R. Rodovalho, Jefferson A. C. dos Santos, Mariane F. Fernandes, Valquíria A. Matheus, Renata Sesti-Costa, Paulo J. Basso, Marina Flóro e Silva, Niels O. S. Câmara, Selma Giorgio, Marc
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    Актуальні проблеми сучасної медицини: Вісник Української медичної стоматологічної академії.2024; 24(2): 277.     CrossRef
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    Tingting Yan, Jinghe Sun, Yuying Zhang, Chengrong Wen, Jingfeng Yang
    Journal of Agricultural and Food Chemistry.2024; 72(42): 23258.     CrossRef
  • Chlorella and vegetable oil inclusion in diets for growing rabbits: effects on growth, digestibility, plasma metabolites, and caecal fermentations and microbiota
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    animal.2024; 18(12): 101365.     CrossRef
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    Jiayue Lou, Baojie Zhang, Yu Zheng, Meiqi Liu, Yang Qu
    Current Research in Food Science.2024; 9: 100863.     CrossRef
  • Blackcurrants shape gut microbiota profile and reduce risk of postmenopausal osteoporosis via the gut-bone axis: Evidence from a pilot randomized controlled trial
    Briana M. Nosal, Staci N. Thornton, Manije Darooghegi Mofrad, Junichi R. Sakaki, Kyle J. Mahoney, Zachary Macdonald, Lauren Daddi, Thi Dong Binh Tran, George Weinstock, Yanjiao Zhou, Elaine Choung-Hee Lee, Ock K. Chun
    The Journal of Nutritional Biochemistry.2024; 133: 109701.     CrossRef
  • Characterization of the follicular fluid microbiota based on culturomics and sequencing analysis
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    Journal of Medical Microbiology .2023;[Epub]     CrossRef
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    Nutrients.2023; 15(8): 1931.     CrossRef
  • Polysaccharides from small black soybean alleviating type 2 diabetes via modulation of gut microbiota and serum metabolism
    Zhouya Bai, Xiaojun Huang, Guangjie Wu, Yanli Zhang, Hedi Xu, Yang Chen, Huayu Yang, Shaoping Nie
    Food Hydrocolloids.2023; 141: 108670.     CrossRef
  • Metatranscriptome analysis of blood in healthy individuals and irritable bowel syndrome patients
    Lauma Jagare, Maija Rozenberga, Ivars Silamikelis, Laura Ansone, Ilze Elbere, Monta Briviba, Kaspars Megnis, Ilze Konrade, Ilze Birka, Zane Straume, Janis Klovins
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  • Gut bacteria of adult and larval Cotinis nitida Linnaeus (Coleoptera: Scarabaeidae) demonstrate community differences according to respective life stage and gut region
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  • Definition of a microbial signature as a predictor of endoscopic post-surgical recurrence in patients with Crohn’s disease
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  • Integrated Analysis of the Effects of Cecal Microbiota and Serum Metabolome on Market Weights of Chinese Native Chickens
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    Animals.2023; 13(19): 3034.     CrossRef
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    Huimin Ji, Dejin Tan, Yuhua Chen, Zhiqiang Cheng, Jingwen Zhao, Miao Lin
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    Noah T. Hutchinson, Selena S. Wang, Laurie A. Rund, Maria Elisa Caetano-Silva, Jacob M. Allen, Rodney W. Johnson, Jeffrey A. Woods
    Experimental Gerontology.2023; 176: 112164.     CrossRef
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    Lydia K. Greene, Erin A. McKenney, William Gasper, Claudia Wrampelmeier, Shivdeep Hayer, Erin E. Ehmke, Jonathan B. Clayton
    Microbial Ecology.2023; 85(4): 1608.     CrossRef
  • Metaproteomic Analysis of Gut Resistome in the Cecal Microbiota of Fattening Pigs Raised without Antibiotics
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  • Effects of dietary Chinese herbal mixtures on productive performance, egg quality, immune status, caecal and offspring meconial microbiota of Wenchang breeder hens
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    Antibiotics.2023; 12(2): 362.     CrossRef
  • Gut Microbiome Profiling of the Endangered Southern Greater Glider (Petauroides volans) after the 2019–2020 Australian Megafire
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  • Orally Administrated Lactiplantibacillus plantarum BGAN8-Derived EPS-AN8 Ameliorates Cd Hazards in Rats
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    International Journal of Molecular Sciences.2023; 24(3): 2845.     CrossRef
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    Animal Feed Science and Technology.2023; 299: 115628.     CrossRef
  • Characterization of the Gut Microbiota in Urban Thai Individuals Reveals Enterotype-Specific Signature
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  • Lignocellulose degradation by rumen bacterial communities: New insights from metagenome analyses
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    Environmental Research.2023; 229: 115925.     CrossRef
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  • Invited review: Rumen modifiers in today's dairy rations
    J.L. Firkins, K.E. Mitchell
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  • Exploration of the Gut Microbiome in Thai Patients with Major Depressive Disorder Shows a Specific Bacterial Profile with Depletion of the Ruminococcus Genus as a Putative Biomarker
    Michael Maes, Asara Vasupanrajit, Ketsupar Jirakran, Pavit Klomkliew, Prangwalai Chanchaem, Chavit Tunvirachaisakul, Sunchai Payungporn
    Cells.2023; 12(9): 1240.     CrossRef
  • Associations between Accelerometer-Measured Physical Activity and Fecal Microbiota in Adults with Overweight and Obesity
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    Medicine & Science in Sports & Exercise.2023; 55(4): 680.     CrossRef
  • Revealing the developmental characterization of rumen microbiome and its host in newly received cattle during receiving period contributes to formulating precise nutritional strategies
    Yanjiao Li, Kang Mao, Yitian Zang, Guwei Lu, Qinghua Qiu, Kehui Ouyang, Xianghui Zhao, Xiaozhen Song, Lanjiao Xu, Huan Liang, Mingren Qu
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  • Food desert residence has limited impact on veteran fecal microbiome composition: a U.S. Veteran Microbiome Project study
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  • The gut microbiome dysbiosis is recovered by restoring a normal diet in hypercholesterolemic pigs
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    European Journal of Clinical Investigation.2023;[Epub]     CrossRef
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    Animals.2023; 13(22): 3437.     CrossRef
  • Dysbiosis in gastrointestinal pathophysiology: Role of the gut microbiome in Gulf War Illness
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    Journal of Cellular and Molecular Medicine.2023; 27(7): 891.     CrossRef
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    Environmental Science & Technology.2023; 57(43): 16219.     CrossRef
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    Wiwat Chancharoenthana, Supitcha Kamolratanakul, Phatcharapon Yiengwattananon, Pornpimol Phuengmaung, Kanyarat Udompornpitak, Wilasinee Saisorn, Pratsanee Hiengrach, Peerapat Visitchanakun, Marcus J Schultz, Asada Leelahavanichkul
    Immunology & Cell Biology.2023; 101(8): 746.     CrossRef
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    Scientific Reports.2023;[Epub]     CrossRef
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    Age and Ageing.2023;[Epub]     CrossRef
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    Heliyon.2023; 9(10): e20803.     CrossRef
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    Frontiers in Aging Neuroscience.2023;[Epub]     CrossRef
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    Frontiers in Immunology.2023;[Epub]     CrossRef
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    Animals.2023; 13(16): 2644.     CrossRef
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    Nutrients.2023; 15(18): 3934.     CrossRef
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    The Nucleus.2023;[Epub]     CrossRef
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    Frontiers in Marine Science.2023;[Epub]     CrossRef
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    Microorganisms.2023; 11(6): 1488.     CrossRef
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    Animals.2022; 12(16): 2011.     CrossRef
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    Journal of Cellular and Molecular Medicine.2022; 26(21): 5360.     CrossRef
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    Journal of Applied Microbiology.2022; 133(4): 2331.     CrossRef
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    British Journal of Nutrition.2022; 127(3): 353.     CrossRef
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    The Journal of Nutrition.2022; 152(6): 1438.     CrossRef
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    Journal of Dairy Science.2022; 105(11): 8879.     CrossRef
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    Science of The Total Environment.2022; 837: 155797.     CrossRef
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    Environmental Pollution.2022; 306: 119418.     CrossRef
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Journal Articles
Introducing EzAAI: a pipeline for high throughput calculations of prokaryotic average amino acid identity
Dongwook Kim , Sein Park , Jongsik Chun
J. Microbiol. 2021;59(5):476-480.   Published online April 28, 2021
DOI: https://doi.org/10.1007/s12275-021-1154-0
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AbstractAbstract
The average amino acid identity (AAI) is an index of pairwise genomic relatedness, and multiple studies have proposed its application in prokaryotic taxonomy and related disciplines. AAI demonstrates better resolution in elucidating taxonomic structure beyond the species rank when compared with average nucleotide identity (ANI), which is a standard criterion in species delineation. However, an efficient and easy-to-use computational tool for AAI calculation in large-scale taxonomic studies is not yet available. Here, we introduce a bioinformatic pipeline, named EzAAI, which allows for rapid and accurate AAI calculation in prokaryote sequences. The EzAAI tool is based on the MMSeqs2 program and computes AAI values almost identical to those generated by the standard BLAST algorithm with significant improvements in the speed of these evaluations. Our pipeline also provides a function for hierarchical clustering to create dendrograms, which is an essential part of any taxonomic study. EzAAI is available for download as a standalone JAVA program at http:// leb.snu.ac.kr/ezaai.

Citations

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    Eva Pouder, Erwann Vince, Karen Jacquot, Maimouna batoma Traoré, Ashley Grosche, Maria Ludwig, Mohamed Jebbar, Loïs Maignien, Karine Alain, Sophie Mieszkin
    Systematic and Applied Microbiology.2025; 48(1): 126578.     CrossRef
  • Description of Hyphococcus formosus sp. nov. and Hyphococcus lacteus sp. nov., isolated from coastal sediment, and reclassification of Marinicaulis flavus as Hyphococcus luteus nom. nov. and Marinicaulis aureus as Hyphococcus aureus comb. nov
    Yu-Qi Ye, Xin-Yue Zhang, Hong-Nan Gong, Meng-Qi Ye, Zong-Jun Du
    Systematic and Applied Microbiology.2025; 48(1): 126575.     CrossRef
  • Methyloraptor flagellatus gen. nov., sp. nov., novel Ancalomicrobiaceae-affiliated facultatively methylotrophic bacteria that feed on methanotrophs of the genus Methylococcus
    Victoria A. Saltykova, Olga V. Danilova, Igor Y. Oshkin, Svetlana E. Belova, Natalia E. Suzina, Nikolai V. Pimenov, Svetlana N. Dedysh
    Systematic and Applied Microbiology.2025; 48(1): 126565.     CrossRef
  • Florfenicol-resistant Brevundimonas sanguinis sp. nov., a novel bacterium isolated from patient blood in South Korea
    Ji Hee Lee, Yewon An, Su Yeon Kim
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Aquibaculum sediminis sp. nov., a halotolerant bacteria isolated from salt lake sediment
    Qing-Yu Xu, Lei Gao, Dildar Wu, Xin-Yao Li, Yong-Hong Liu, Yao Zhang, Yue-Heng Chen, Ting-Ting She, Bao-Zhu Fang, Wen-Jun Li
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • LINgroups as a Robust Principled Approach to Compare and Integrate Multiple Bacterial Taxonomies
    Reza Mazloom, N. Tessa Pierce-Ward, Parul Sharma, Leighton Pritchard, C. Titus Brown, Boris A. Vinatzer, Lenwood S. Heath
    IEEE/ACM Transactions on Computational Biology and Bioinformatics.2024; 21(6): 2304.     CrossRef
  • Microbulbifer spongiae sp. nov., isolated from marine sponge Diacarnus erythraeanus
    Nabila Ishaq, Mimi Zhang, Luyao Gao, Micha Ilan, Zhiyong Li
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Genome‐based taxonomic analysis of the genus Pseudoalteromonas reveals heterotypic synonyms
    Patrick Videau, Maximillian D. Shlafstein, David K. Oline, Scott A. Givan, Linda Fleet Chapman, Wendy K. Strangman, Richard L. Hahnke, Jimmy H. Saw, Blake Ushijima
    Environmental Microbiology.2024;[Epub]     CrossRef
  • Arcicella gelida sp. nov. and Arcicella lustrica sp. nov., isolated from streams in China and re-examining the taxonomic status of all the genera within the families Spirosomataceae and Cytophagaceae
    Huibin Lu, Li Chen, Linpei Huang
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Sustained bacterial N2O reduction at acidic pH
    Guang He, Gao Chen, Yongchao Xie, Cynthia M. Swift, Diana Ramirez, Gyuhyon Cha, Konstantinos T. Konstantinidis, Mark Radosevich, Frank E. Löffler
    Nature Communications.2024;[Epub]     CrossRef
  • Paenalcaligenes faecalis sp. nov., a novel species of the family Alcaligenaceae isolated from chicken faeces
    Yiran Zhang, John Quensen, Bo Chen, Hailong Li, James Tiedje, Wei Sun, Xun Qian
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Rhodoferax lithotrophicus sp. nov., a neutrophilic iron-oxidizing and -reducing bacterium isolated from iron-rich freshwater sediments
    Shingo Kato, Takashi Itoh, Takao Iino, Mitsuo Sakamoto, Moriya Ohkuma
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Paenibacillus suaedae sp. nov. and Paenibacillus violae sp. nov., isolated from the roots of Suaeda japonica Makino and Viola mandshurica W. Becker with plant growth-promoting potential
    Inhyup Kim, Sunho Park, Yonghee Jung, Haejin Woo, Hyunji Lee, Subin Yook, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Genetic potential for aerobic respiration and denitrification in globally distributed respiratory endosymbionts
    Daan R. Speth, Linus M. Zeller, Jon S. Graf, Will A. Overholt, Kirsten Küsel, Jana Milucka
    Nature Communications.2024;[Epub]     CrossRef
  • Description of the first marine-isolated member of the under-represented phylum Gemmatimonadota , and the environmental distribution and ecogenomics of Gaopeijiales ord. nov.
    Yu-Qi Ye, Meng-Qi Ye, Xin-Yue Zhang, You-Zhi Huang, Zi-Yang Zhou, Yan-Jun Feng, Zong-Jun Du, Thulani P. Makhalanyane
    mSystems.2024;[Epub]     CrossRef
  • Ideonella margarita sp. nov., Ideonella lacteola sp. nov., Pseudaquabacterium inlustre sp. nov. and Pseudaquabacterium rugosum sp. nov., isolated from streams in China and re-examining the taxonomic status of all the genera within the family
    Huibin Lu, Li Chen
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Comparative genomics of obligate predatory bacteria belonging to phylum Bdellovibrionota highlights distribution and predicted functions of lineage-specific protein families
    Sidney C. Davis, Joseph Cerra, Laura E. Williams, Barbara J. Campbell
    mSphere.2024;[Epub]     CrossRef
  • Isolation and characterization of cellulose-mineralizing haloalkaliphilic bacteria from Siberian soda lakes
    Dimitry Y. Sorokin, Alexander Y. Merkel, Tatjana V. Khizhniak
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • The genome of a new Halorubrum distributum strain ICIS4 isolated from the culture of a microalga Dunaliella salina
    Е. А. Selivanova, А. S. Balkin, Yu. А. Khlopko, V. Ya. Kataev, А. О. Plotnikov
    Microbiology.2024; 93(4): 444.     CrossRef
  • Lacrimispora brassicae sp. nov. isolated from fermented cabbage, and proposal of Clostridium indicum Gundawar et al. 2019 and Clostridium methoxybenzovorans Mechichi et al. 1999 as heterotypic synonyms of Lacrimispora amygdalina (Parshina et
    Hisami Kobayashi, Yasuhiro Tanizawa, Mitsuo Sakamoto, Moriya Ohkuma, Masanori Tohno
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Clostridium lapidicellarium sp. nov. and Clostridium moutaii sp. nov., two species isolated from fermentation cellar-producing sauce-flavour Chinese baijiu
    Fan Yang, Hui Wang, Liang-Qiang Chen, Nan Zhou, Jian-Jun Lu, Xiu-Xin Pu, Bo Wan, Li Wang, Shuang-Jiang Liu
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Ultraconserved bacteriophage genome sequence identified in 1300-year-old human palaeofaeces
    Piotr Rozwalak, Jakub Barylski, Yasas Wijesekara, Bas E. Dutilh, Andrzej Zielezinski
    Nature Communications.2024;[Epub]     CrossRef
  • Description of Streptococcus dentalis sp. nov., Streptococcus gingivalis sp. nov., and Streptococcus lingualis sp. nov., Isolated from Human Oral Cavities
    Beom-Jin Goo, Young-Sik Choi, Do-Hun Gim, Su-Won Jeong, Jee-Won Choi, Hojun Sung, Jae-Yun Lee, Jin-Woo Bae
    Journal of Microbiology.2024; 62(11): 973.     CrossRef
  • Hohaiivirga grylli gen. nov., sp. nov., a New Member of the Family Methylobacteriaceae, Isolated from Cricket (Gryllus chinensis)
    Hong-Chuan Wang, Meng-Han Huang, Dan-Yuan Guo, Wei He, Lu Wang, Zi-Yue Fu, Wen-Jun Li, Ai Hua Zhang, Dao-Feng Zhang
    Current Microbiology.2024;[Epub]     CrossRef
  • Cellulomonas alba sp. nov. and Cellulomonas edaphi sp. nov., isolated from wetland soils
    Sunho Park, Inhyup Kim, Geeta Chhetri, Yonghee Jung, Haejin Woo, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Age, metabolisms, and potential origin of dominant anammox bacteria in the global oxygen-deficient zones
    Rui Zhao, Irene H Zhang, Amal Jayakumar, Bess B Ward, Andrew R Babbin
    ISME Communications.2024;[Epub]     CrossRef
  • Limosilactobacillus allomucosae sp. nov., a novel species isolated from wild boar faecal samples as a potential probiotic for domestic pigs
    Binbin Chen, Shaktheeshwari Silvaraju, Sharifah Nora Ahmad Almunawar, Yu Chyuan Heng, Jolie Kar Yi Lee, Sandra Kittelmann
    Systematic and Applied Microbiology.2024; 47(6): 126556.     CrossRef
  • Evaluation of sequence-based tools to gather more insight into the positioning of rhizogenic agrobacteria within the Agrobacterium tumefaciens species complex
    Pablo Roberto Vargas Ribera, Nuri Kim, Marc Venbrux, Sergio Álvarez-Pérez, Hans Rediers, Muhammad Anwar
    PLOS ONE.2024; 19(11): e0302954.     CrossRef
  • Chitiniphilus purpureus sp. nov., a novel chitin-degrading bacterium isolated from crawfish pond sediment
    Kaiyang Li, Xiong Luo, Rongrong Fan, Zhuoran Ding, Shixue Zheng, Zhengjun Chen
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Thalassotalea aquiviva sp. nov., and Thalassotalea maritima sp. nov., Isolated from Seawater of the Coast in South Korea
    Jina Lee, Seung-Hui Song, Kira Moon, Nakyeong Lee, Sangdon Ryu, Hye Seon Song, Sung Moon Lee, Yun Ji Kim, Se Won Chun, Kyung-Min Choi, Aslan Hwanhwi Lee
    Journal of Microbiology.2024; 62(12): 1099.     CrossRef
  • Cold adaptation and response genes of Antarctic Cryobacterium sp. SO2 from the Fildes Peninsula, King George Island
    Chui Peng Teoh, Marcelo González‑Aravena, Paris Lavin, Clemente Michael Vui Ling Wong
    Polar Biology.2024; 47(2): 135.     CrossRef
  • Xiashengella succiniciproducens gen. nov., sp. nov., a succinate-producing bacterium isolated from an anaerobic digestion tank in the family Marinilabiliaceae of the order Bacteroidales
    Hao-Jie Huang, Xi Zhang, Xin-Wei Sun, Biao Chen, Xiu-Tong Li, Nan Zhou, Rashidin Abdugheni, Qiu-Yin Cheng, Tie-Jun Zhang, Yao Liu, Yong Jiang, Ye Deng, Shuang-Jiang Liu, Cheng-Ying Jiang
    Archives of Microbiology.2024;[Epub]     CrossRef
  • Paracoccus spongiarum sp. nov., isolated from the marine sponge, Phakellia elegans
    Soo-Bin Kim, Kyung Hyun Kim, Jin-Sook Park
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Sorlinia euscelidii gen. nov., sp. nov., a novel acetic acid bacterium isolated from the leafhopper Euscelidius variegatus (Hemiptera: Cicadellidae)
    Ramona Marasco, Grégoire Michoud, Kholoud A. Seferji, Elena Gonella, Elisa Garuglieri, Eleonora Rolli, Alberto Alma, Francesca Mapelli, Sara Borin, Daniele Daffonchio, Elena Crotti
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Comparative genomics of the genus Halioglobus reveals the genetic basis for the reclassification of Halioglobus pacificus as Parahalioglobus pacificus gen. nov. comb. nov
    Jake Adolf V. Montecillo
    International Microbiology.2024; 27(6): 1831.     CrossRef
  • Neisseria leonii sp. nov., isolated from the nose, lung, and liver of rabbits
    Martin Boutroux, Sandrine Favre-Rochex, Olivier Gorgette, Gérald Touak, Estelle Mühle, Christiane Bouchier, Olivier Chesneau, Frédéric J. Veyrier, Dominique Clermont, Praveen Rahi
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Pedobacter rhodius sp. nov. and Pedobacter punctiformis sp. nov., isolated from soil
    Haejin Woo, Geeta Chhetri, Inhyup Kim, Yoonseop So, Sunho Park, Yonghee Jung, Taegun Seo
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Taxonomic characterization of Sphaerotilus microaerophilus sp. nov., a sheath-forming microaerophilic bacterium of activated sludge origin
    Shiori Narihara, Shun Chida, Naoki Matsunaga, Ryosuke Akimoto, Mizuki Akimoto, Aoi Hagio, Tomomi Mori, Tadashi Nittami, Michio Sato, Sehui Mun, Hyeonjin Kang, Ji Hwan Back, Minoru Takeda
    Archives of Microbiology.2024;[Epub]     CrossRef
  • Streptomyces yaizuensis sp. nov., a berninamycin C-producing actinomycete isolated from sponge
    Miku Takahashi, Kanata Hoshino, Moriyuki Hamada, Tomohiko Tamura, Ryota Moriuchi, Hideo Dohra, Youji Nakagawa, Susumu Kokubo, Motoyuki Yamazaki, Hiroyuki Nakagawa, Masayuki Hayakawa, Shinya Kodani, Hideki Yamamura
    The Journal of Antibiotics.2024;[Epub]     CrossRef
  • Advanced aspects of acetogens
    Anja Poehlein, Benjamin Zeldes, Maximilian Flaiz, Tim Böer, Alina Lüschen, Franziska Höfele, Kira S. Baur, Bastian Molitor, Christian Kröly, Meng Wang, Quan Zhang, Yixuan Fan, Wei Chao, Rolf Daniel, Fuli Li, Mirko Basen, Volker Müller, Largus T. Angenent,
    Bioresource Technology.2024; : 131913.     CrossRef
  • Sphingomonas rustica sp. nov. and Sphingomonas agrestis sp. nov., novel carotenoid-producing bacterial species isolated from farm soil
    Hyunji Lee, Inhyup Kim, Sunho Park, Haejin Woo, Subin Yook, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Hidden genomic diversity drives niche partitioning in a cosmopolitan eukaryotic picophytoplankton
    Yangbing Xu, Shara K K Leung, Taylor M W Li, Charmaine C M Yung
    The ISME Journal.2024;[Epub]     CrossRef
  • Flagellimonas baculiformis sp. nov. and Flagellimonas crocea sp. nov., isolated from surface seawater of the Pacific Ocean
    Ming-lei Wang, Ge-Yi Fu, Xue-Wei Xu
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Two Novel Bacterial Species, Rhodanobacter lycopersici sp. nov. and Rhodanobacter geophilus sp. nov., Isolated from the Rhizosphere of Solanum lycopersicum with Plant Growth-Promoting Traits
    Haejin Woo, Inhyup Kim, Geeta Chhetri, Sunho Park, Hyunji Lee, Subin Yook, Taegun Seo
    Microorganisms.2024; 12(11): 2227.     CrossRef
  • Preliminary comparative genomics analysis among Corynebacterium kroppenstedtii complex necessitates a reassessment of precise species associated with mastitis
    Ying Huang, Ming-Hui Song, Shun-Guang Li, Hong- Yu Shen, Ping-Hua Qu, Dao-Feng Zhang
    Journal of Applied Microbiology.2024;[Epub]     CrossRef
  • Salmonirosea aquatica gen. nov., sp. nov., a Novel Genus within the Family Spirosomaceae, Was Isolated from Brackish Water in the Republic of Korea
    Kiwoon Baek, Sumin Jang, Jaeduk Goh, Ahyoung Choi
    Microorganisms.2024; 12(8): 1671.     CrossRef
  • Phylogenomic analyses of the genus Actinoplanes: description of four novel genera
    Ivan Roman, Victor Fedorenko, Oleksandr Gromyko
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • A hotspot of diversity: novel Shewanella species isolated from Baltic Sea sediments delineate a sympatric species complex
    Alberto J. Martín-Rodríguez, Víctor Fernández-Juárez, Valerie D. Valeriano, Indiwari Mihindukulasooriya, Livia Ceresnova, Enrique Joffré, Susanne Jensie-Markopoulos, Edward R. B. Moore, Åsa Sjöling
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • An evolutionary view of the Fusarium core genome
    Daniel A. Gomez-Chavarria, Alvaro L. Rua-Giraldo, Juan F. Alzate
    BMC Genomics.2024;[Epub]     CrossRef
  • Complete genome sequence of a winter season Vibrio facilitates discovery of a novel subclade of cold-adapted species in the albus clade
    Paul D. Kastner, Stephen E. Noell, David A. Essig
    Microbial Genomics .2024;[Epub]     CrossRef
  • Advancements in prokaryotic systematics and the role of Bergey's International Society for Microbial Systematicsin addressing challenges in the meta-data era
    Jian-Yu Jiao, Rashidin Abdugheni, Dao-Feng Zhang, Iftikhar Ahmed, Mukhtiar Ali, Maria Chuvochina, Svetlana N Dedysh, Xiuzhu Dong, Markus Göker, Brian P Hedlund, Philip Hugenholtz, Kamlesh Jangid, Shuang-Jiang Liu, Edward R B Moore, Manik Prabhu Narsing Ra
    National Science Review.2024;[Epub]     CrossRef
  • Klebsiella Pneumoniae – Taxonomy, Occurrence, Identification, Virulence Factors and Pathogenicity
    Dorota Ochońska, Monika Brzychczy-Włoch
    Advancements of Microbiology.2024; 63(3): 157.     CrossRef
  • Characterization of a Novel Species of Legionella Isolated from a Healthcare Facility: Legionella resiliens sp. nov
    Sandra Cristino, Maria Rosaria Pascale, Federica Marino, Carlo Derelitto, Silvano Salaris, Massimiliano Orsini, Stefano Squarzoni, Antonella Grottola, Luna Girolamini
    Pathogens.2024; 13(3): 250.     CrossRef
  • Genome-based classification of Halobellus rubicundus sp. nov., a novel extremely halophilic archaeon isolated from a Korean solar saltern
    Chi Young Hwang, Eui-Sang Cho, In-Tae Cha, Ki-Eun Lee, Eun-Young Lee, Myung-Ji Seo
    Extremophiles.2024;[Epub]     CrossRef
  • Reclassification of Aestuariicella albida as Pseudomaricurvus albidus comb. nov. and Aestuariicella hydrocarbonica as Pseudomaricurvus hydrocarbonicus comb. nov. Based on Comparative Genomics and Molecular Synapomorphies
    Jake Adolf V. Montecillo, Merell P. Billacura, Maria Distressa G. Billacura
    Current Microbiology.2024;[Epub]     CrossRef
  • Schauerella fraxinea gen. nov., sp. nov., a bacterial species that colonises ash trees tolerant to dieback caused by Hymenoscyphus fraxineus
    Undine Behrendt, Valentin Burghard, Sonja Wende, Kristina Ulrich, Jacqueline Wolf, Meina Neumann-Schaal, Andreas Ulrich
    Systematic and Applied Microbiology.2024; 47(4): 126516.     CrossRef
  • Roseateles subflavus sp. nov. and Roseateles aquae sp. nov., isolated from artificial pond water and Roseateles violae sp. nov., isolated from a Viola mandshurica root
    Haejin Woo, Geeta Chhetri, Inhyup Kim, Yoonseop So, Sunho Park, Yonghee Jung, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • New Drinking Water Genome Catalog Identifies a Globally Distributed Bacterial Genus Adapted to Disinfected Drinking Water Systems
    Ashwin S Sudarshan, Zihan Dai, Marco Gabrielli, Solize Oosthuizen-Vosloo, Konstantinos T. Konstantinidis, Ameet J Pinto
    Environmental Science & Technology.2024; 58(37): 16475.     CrossRef
  • Phylogenomic evaluation of Mangrovimicrobium sediminis gen. nov. sp. nov., the first nitrogen fixing member of the family Halieaceae adapted to mangrove habitat and reclassification of Halioglobus pacificus to Pseudohaliglobus pacificus comb. nov.
    Pravin Kumar, Ashish Verma, Pooja Yadav, Joyasree Das, Lalit Kumar, Srinivasan Krishnamurthi
    Science of The Total Environment.2024; 933: 172995.     CrossRef
  • Draft Genome Sequences of Three Janthinobacterium lividum Strains Producing Violacein
    Yu Jeong Lee, Jae-Cheol Lee, Kira Moon, Aslan Hwanhwi Lee, Byung Hee Chun
    Microbiology and Biotechnology Letters.2024; 52(2): 215.     CrossRef
  • Eubacterium album sp. nov., a butyrate-producing bacterium isolated from faeces of a healthy human
    Feng-Lan Liu, Rashidin Abdugheni, Cong-Guo Ran, Nan Zhou, Shuang-Jiang Liu
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Description of Asgardarchaeum abyssi gen. nov. spec. nov., a novel species within the class Asgardarchaeia and phylum Asgardarchaeota in accordance with the SeqCode
    Daniel Tamarit, Stephan Köstlbacher, Kathryn E. Appler, Kassiani Panagiotou, Valerie De Anda, Christian Rinke, Brett J. Baker, Thijs J.G. Ettema
    Systematic and Applied Microbiology.2024; 47(4): 126525.     CrossRef
  • Alterisphingorhabdus coralli gen. nov. sp. nov., a novel aerobic anoxygenic phototrophic bacteria isolated from reef-building coral
    Chang Yan, Kun Zhang, Songbiao Shi, Lili Jian, Beilin Chen, Syed Raziuddin Quadri, Xinpeng Tian
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Update on the proposed minimal standards for the use of genome data for the taxonomy of prokaryotes
    Raúl Riesco, Martha E. Trujillo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Polymorphospora lycopeni sp. nov., a lycopene-producing actinomycetes isolated from lakeside soil sample of Baiyangdian
    Jiashan Liu, Shilong Li, Xiaomin Duan, Hongmei Li, Xiumin Zhang
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Reclassification of Butyrivibrio crossotus Moore et al. 1976 (Approved Lists 1980) into a novel genus as Eshraghiella crossota gen. nov., comb. nov.
    Mehdi Fatahi-Bafghi
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Analysis of the genetic diversity in RNA-directed RNA polymerase sequences: implications for an automated RNA virus classification system
    Zhongshuai Tian, Tao Hu, Edward C Holmes, Jingkai Ji, Weifeng Shi
    Virus Evolution.2024;[Epub]     CrossRef
  • Fodinisporobacter ferrooxydans gen. nov., sp. nov.—A Spore-Forming Ferrous-Oxidizing Bacterium Isolated from a Polymetallic Mine
    Zhen Jiang, Xiutong Li, Zonglin Liang, Zebao Tan, Nan Zhou, Ying Liu, Zhenghua Liu, Huaqun Yin, Kun Luo, Supawadee Ingsriswang, Shuangjiang Liu, Chengying Jiang
    Microorganisms.2024; 12(5): 853.     CrossRef
  • An abundant bacterial phylum with nitrite-oxidizing potential in oligotrophic marine sediments
    Rui Zhao, Steffen L. Jørgensen, Andrew R. Babbin
    Communications Biology.2024;[Epub]     CrossRef
  • Genomic and phenotypic characterization of 26 novel marine bacterial strains with relevant biogeochemical roles and widespread presence across the global ocean
    Xavier Rey-Velasco, Teresa Lucena, Ana Belda, Josep M. Gasol, Olga Sánchez, David R. Arahal, María J. Pujalte
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • Ignisphaera cupida sp. nov., a hyperthermophilic hydrolytic archaeon from a hot spring of Uzon (Kamchatka), and emended description of the genus Ignisphaera
    Olga A. Podosokorskaya, Alexander G. Elcheninov, Alexandra A. Klyukina, Alexander Y. Merkel
    Systematic and Applied Microbiology.2024; 47(5): 126541.     CrossRef
  • Genomic diversity in Paenibacillus polymyxa: unveiling distinct species groups and functional variability
    Adrian Wallner, Livio Antonielli, Ouiza Mesguida, Patrice Rey, Stéphane Compant
    BMC Genomics.2024;[Epub]     CrossRef
  • Taxonomic and genomic characterization of a siderophore-producing bacterium, Rhodoligotrophos ferricapiens sp. nov isolated from lettuce cultivation soil
    Yu-Jin Kim, Yong-Seok Kim, Chang-Jun Cha
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Comparative genomic analyses of Cutibacterium granulosum provide insights into genomic diversity
    Peishan Chen, Shaojing Wang, Hongyan Li, Xiaoye Qi, Yuanyuan Hou, Ting Ma
    Frontiers in Microbiology.2024;[Epub]     CrossRef
  • A new insight on the xyl upper operon revealed through genomic investigation strategy
    Xuefeng Tian, Shaojing Wang, Peishan Chen, Mingbo Yang, Zhaoying Su, Yue Ming, Guoqiang Li, Ting Ma
    International Biodeterioration & Biodegradation.2024; 189: 105748.     CrossRef
  • Genome-based reclassification of Spiroplasma atrichopogonis Koerber et al. 2005 as a later heterotypic synonym of Spiroplasma mirum Tully et al. 1982
    Vatsal Bhargava, Darshana Lahon, Sonal Gupta, Jasvinder Kaur, Pushp Lata
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Lysinibacillus piscis sp. nov. isolated from the gut of mottled spinefoot Siganus fuscescens
    Hiyu Kanbe, Yuki Sano, Kazumori Mise, Shusei Kanie, Natsumi Ushijima, Keisuke Kawano, Minoru Kihara, Hideomi Itoh
    Archives of Microbiology.2024;[Epub]     CrossRef
  • Specific amino acid changes correlate with pathogenic flavobacteria
    Vincent Gélinas, Valérie E. Paquet, Maude F. Paquet, Steve J. Charette, Antony T. Vincent
    Genome.2024; 67(10): 368.     CrossRef
  • Aurantiacibacter flavus sp. nov. and Aurantiacibacter gilvus sp. nov., isolated from the mudflat of Suaeda japonica colonies
    Sunho Park, Inhyup Kim, Haejin Woo, Hyunji Lee, Subin Yook, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Splendidivirga corallicola gen. nov., sp. nov. and Agaribacillus aureus gen. nov., sp. nov., two bacteria isolated from coral Porites lutea, and proposal of Splendidivirgaceae fam. nov.
    Jin Li, Jixin Luo, Mi Li, Chenyan Wang, Siyu Hu, Kun Lu, Guanghua Wang
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • The Genome of a New Halorubrum distributum Strain ICIS4 Isolated from the Culture of a Microalga Dunaliella salina
    E. A. Selivanova, A. S. Balkin, Yu. A. Khlopko, V. Ya. Kataev, A. O. Plotnikov
    Microbiology.2024; 93(4): 482.     CrossRef
  • Peteryoungia algae sp. nov. isolated from seaweeds of Gouqi Island, China, and its unique genetic features among Peteryoungia strains
    Jun Yin, Min He, Xiao-Xiao Liu, Chang-Bin Ren, Hou-Hong Liu, Hai Luo, Gen Chen, Ze-Fei Wang, Sanjit Chandra Debnath, Pin-Mei Wang, Hai-Xin Chen, Dao-Qiong Zheng
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Methylomonas rivi sp. nov., Methylomonas rosea sp. nov., Methylomonas aurea sp. nov. and Methylomonas subterranea sp. nov., type I methane-oxidizing bacteria isolated from a freshwater creek and the deep terrestrial subsurface
    Christopher A. Abin, Christopher T. Garner, Krithivasan Sankaranarayanan, Reid A. Sindelar, Kyrah F. Kotary, Rosa M. Garner, Samantha C. Barclay, Haiyuan Cai, Paul A. Lawson, Lee R. Krumholz
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  • Phylogenomic discernments into Anaerolineaceae thermal adaptations and the proposal of a candidate genus Mesolinea
    Katherine Bedoya-Urrego, Juan F. Alzate
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  • Unraveling the genomic secrets of Tritonibacter mobilis AK171: a plant growth-promoting bacterium isolated from Avicennia marina
    Amal Khalaf Alghamdi, Sabiha Parween, Heribert Hirt, Maged M. Saad
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  • Ochrobactrum chromiisoli sp. nov., Isolated from Chromium-Contaminated Soil
    Yi Yang, Zhe Xu, Li Yang, Meng-yao Hu, Guang-yang Jiang, Jia Chen, Yi-chen Yang, Yongqiang Tian
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  • Spartinivicinus poritis sp. nov., a red pigment-producing bacterium isolated from a scleractinian coral Porites lutea
    Sumbal Sajid, Guoqiang Zhang, Zongyao Zhang, Yishan Lu, Lianguo Chen, Lin Cai
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Tardiphaga alba sp. nov., a heavy-metal-tolerant bacterium isolated from garden soil
    Zhihua Bao, Chaojun Wang, Jiahui Cao, Tingting Zhang, Yong Guo, Yoshinori Sato, Tomoyasu Nishizawa, Hiroyuki Ohta
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  • Novel order-level lineage of ammonia-oxidizing archaea widespread in marine and terrestrial environments
    Yue Zheng, Baozhan Wang, Ping Gao, Yiyan Yang, Bu Xu, Xiaoquan Su, Daliang Ning, Qing Tao, Qian Li, Feng Zhao, Dazhi Wang, Yao Zhang, Meng Li, Mari-K H Winkler, Anitra E Ingalls, Jizhong Zhou, Chuanlun Zhang, David A Stahl, Jiandong Jiang, Willm Martens-H
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  • Refining the taxonomy of the order Hyphomicrobiales (Rhizobiales) based on whole genome comparisons of over 130 type strains
    George C. diCenzo, Yuqi Yang, J. Peter W. Young, Nemanja Kuzmanović
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Luteimonas flava sp. nov. and Aquilutibacter rugosus gen. nov., sp. nov., isolated from freshwater environments in China and re-examining the taxonomic status of genera Luteimonas and Lysobacter
    Huibin Lu, Li Chen, Yujing Wang, Peng Xing, Qinglong Wu
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  • Novel taxonomic and functional diversity of eight bacteria from the upper digestive tract of chicken
    Bibiana Rios-Galicia, Johan S. Sáenz, Timur Yergaliyev, Christoph Roth, Amélia Camarinha-Silva, Jana Seifert
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  • Parendozoicomonas callyspongiae sp. nov. Isolated from a Marine Sponge, Callyspongia elongate, and Reclassification of Sansalvadorimonas verongulae as Parendozoicomonas verongulae comb. nov.
    Soo-Bin Kim, Kyung Hyun Kim, Jin-Sook Park
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  • Novel phage infecting the Roseobacter CHUG lineage reveals a diverse and globally distributed phage family
    Zuqing Wu, Luyuan Guo, Ying Wu, Mingyu Yang, Sen Du, Jiabing Shao, Zefeng Zhang, Yanlin Zhao, Michael J. Imperiale
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  • Biochip-Based Identification of Mycobacterial Species in Russia
    Danila Zimenkov, Vyacheslav Zhuravlev, Anastasia Ushtanit, Marina Filippova, Uliana Semenova, Natalia Solovieva, Maria Sviridenko, Anastasia Khakhalina, Svetlana Safonova, Marina Makarova, Elizaveta Gordeeva, Elena Guselnikova, Yakov Schwartz, Natalia Sta
    International Journal of Molecular Sciences.2024; 25(23): 13200.     CrossRef
  • Leptothrix ochracea genomes reveal potential for mixotrophic growth on Fe(II) and organic carbon
    Gracee K. Tothero, Rene L. Hoover, Ibrahim F. Farag, Daniel I. Kaplan, Pamela Weisenhorn, David Emerson, Clara S. Chan, Arpita Bose
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  • Svornostia abyssi gen. nov., sp. nov. isolated from the world’s deepest silver–uranium mine currently devoted to the extraction of radon-saturated water
    Gabriela Kapinusova, Jachym Suman, Michal Strejcek, Petr Pajer, Tomas Cajthaml, Pavel Ulbrich, Meina Neumann-Schaal, Ondrej Uhlik
    International Journal of Systematic and Evolutionary Microbiology .2024;[Epub]     CrossRef
  • Genomic analysis of the class Phycisphaerae reveals a versatile group of complex carbon-degrading bacteria
    Wouter B. Lenferink, Theo A. van Alen, Mike S. M. Jetten, Huub J. M. Op den Camp, Maartje A. H. J. van Kessel, Sebastian Lücker
    Antonie van Leeuwenhoek.2024;[Epub]     CrossRef
  • Genome streamlining in Parcubacteria transitioning from soil to groundwater
    Narendrakumar M. Chaudhari, Olga M. Pérez-Carrascal, Will A. Overholt, Kai U. Totsche, Kirsten Küsel
    Environmental Microbiome.2024;[Epub]     CrossRef
  • Sulfurospirillum diekertiae sp. nov., a tetrachloroethene-respiring bacterium isolated from contaminated soil
    Huijuan Jin, Leitao Huo, Yi Yang, Yan Lv, Jingjing Wang, Julien Maillard, Christof Holliger, Frank E. Löffler, Jun Yan
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  • Description of Pseudocalidococcus azoricus gen. sp. nov. (Thermosynechococcaceae, Cyanobacteria), a Rare but Widely Distributed Coccoid Cyanobacteria
    Rúben Luz, Rita Cordeiro, Jan Kaštovský, Amélia Fonseca, Ralph Urbatzka, Vitor Vasconcelos, Vítor Gonçalves
    Diversity.2023; 15(12): 1157.     CrossRef
  • The identification of the new species Nitratireductor thuwali sp. nov. reveals the untapped diversity of hydrocarbon-degrading culturable bacteria from the arid mangrove sediments of the Red Sea
    Ramona Marasco, Grégoire Michoud, Fatmah O. Sefrji, Marco Fusi, Chakkiath P. Antony, Kholoud A. Seferji, Alan Barozzi, Giuseppe Merlino, Daniele Daffonchio
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  • Danxiaibacter flavus gen. nov., sp. nov., a novel bacterium of the family Chitinophagaceae isolated from forest soil on Danxia Mountain
    Zhuo-Huan Zheng, Chun-Yan Lu, Wen-Hui Lian, Jia-Rui Han, Fang Chen, Ting Zhou, Shuai Li, Lei Dong, Wen-Jun Li
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Metabolic profiling of petroleum-degrading microbial communities incubated under high-pressure conditions
    Jinbo Xu, Lu Wang, Weifeng Lv, Xinmin Song, Yong Nie, Xiao-Lei Wu
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  • Comparative Genomics Reveal the High Conservation and Scarce Distribution of Nitrogen Fixation nif Genes in the Plant-Associated Genus Herbaspirillum
    Ana Marina Pedrolo, Filipe Pereira Matteoli, Cláudio Roberto Fônseca Sousa Soares, Ana Carolina Maisonnave Arisi
    Microbial Ecology.2023; 86(1): 563.     CrossRef
  • UACG: Up-to-Date Archaeal Core Genes and Software for Phylogenomic Tree Reconstruction
    Seong-In Na, Michael James Bailey, Mauricio Chalita, Jae Hyoung Cho, Jongsik Chun
    Journal of Microbiology.2023; 61(7): 683.     CrossRef
  • Alkalicoccobacillus porphyridii sp. nov., isolated from a marine red alga, reclassification of Shouchella plakortidis and Shouchella gibsonii as Alkalicoccobacillus plakortidis comb. nov. and Alkalicoccobacillus gibsonii comb. nov., and emend
    Kyung Hyun Kim, Dong Min Han, Jae Kyeong Lee, Che Ok Jeon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Phocaeicola oris sp. nov., an anaerobic bacterium isolated from the saliva of a patient with oral squamous cell carcinoma
    Jiung-Wen Chen, Chao-Jen Shih, Li-Wha Wu, Yen-Chi Wu, Wei-Fan Chiang, Yuh-Ling Chen, Jer-Horng Wu
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  • Methylacidiphilum caldifontis gen. nov., sp. nov., a thermoacidophilic methane-oxidizing bacterium from an acidic geothermal environment, and descriptions of the family Methylacidiphilaceae fam. nov. and order Methylacidiphilales ord. nov.
    Samuel Imisi Awala, Joo-Han Gwak, Yongman Kim, Chanmee Seo, Andrea Strazzulli, Song-Gun Kim, Sung-Keun Rhee
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  • Genome-based classification of the class Halobacteria and description of Haladaptataceae fam. nov. and Halorubellaceae fam. nov
    Can Cui, Dong Han, Jing Hou, Heng-Lin Cui
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  • Complete genome sequence analysis of plant growth-promoting bacterium, Isoptericola sp. AK164 isolated from the rhizosphere of Avicennia marina growing at the Red Sea coast
    Amal Khalaf Alghamdi, Sabiha Parween, Heribert Hirt, Maged M. Saad
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  • Draft genome sequence of Hahella sp. CR1 and its ability in producing cellulases for saccharifying agricultural biomass
    Melvin Chun Yun Tan, Muhammad Ramziuddin Zakaria, Kok Jun Liew, Chun Shiong Chong
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  • Sedimenticola hydrogenitrophicus sp. nov. a chemolithoautotrophic bacterium isolated from a terrestrial mud volcano, and proposal of Sedimenticolaceae fam. nov. in the order Chromatiales
    Galina Slobodkina, Alexander Merkel, Nataliya Ratnikova, Alexandra Kuchierskaya, Alexander Slobodkin
    Systematic and Applied Microbiology.2023; 46(5): 126451.     CrossRef
  • Comparative genomic assessment of members of genus Tenacibaculum: an exploratory study
    Rohit Satyam, Shaban Ahmad, Khalid Raza
    Molecular Genetics and Genomics.2023; 298(5): 979.     CrossRef
  • Cave Thiovulum (Candidatus Thiovulum stygium) differs metabolically and genomically from marine species
    Mina Bizic, Traian Brad, Danny Ionescu, Lucian Barbu-Tudoran, Luca Zoccarato, Joost W Aerts, Paul-Emile Contarini, Olivier Gros, Jean-Marie Volland, Radu Popa, Jessica Ody, Daniel Vellone, Jean-François Flot, Scott Tighe, Serban M Sarbu
    The ISME Journal.2023; 17(3): 340.     CrossRef
  • Solicola gregarius gen. nov., sp. nov., a soil actinobacterium isolated after enhanced cultivation with Micrococcus luteus culture supernatant
    Marco A. Lopez Marin, Jachym Suman, Kunal Jani, Pavel Ulbrich, Tomas Cajthaml, Alena Filipova, Petr Pajer, Meina Neumann-Schaal, Michal Strejcek, Ondrej Uhlik
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Microbial Niche Differentiation during Nitrite-Dependent Anaerobic Methane Oxidation
    Wen-Bo Nie, Guo-Jun Xie, Xin Tan, Jie Ding, Yang Lu, Yi Chen, Chun Yang, Qiang He, Bing-Feng Liu, Defeng Xing, Nanqi Ren
    Environmental Science & Technology.2023; 57(17): 7029.     CrossRef
  • Allocoprobacillus halotolerans gen. nov., sp. nov and Coprobacter tertius sp. nov., isolated from human gut microbiota
    Nancy M. Y. Teng, Raymond Kiu, Rhiannon Evans, David J. Baker, Christian Zenner, Stephen D. Robinson, Lindsay J. Hall
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Aridibaculum aurantiacum gen. nov., sp. nov., isolated from the Kumtag Desert soil
    Lei Dong, Shuai Li, Guo-Yuan Shi, Jia-Rui Han, Chun-Yan Lu, Wen-Hui Lian, Ling-Xiang Yue, Dalal Hussien M. Alkhalifah, Wael N. Hozzein, Wen-Jun Li
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Acidaminococcus homini s sp. nov., Amedibacillus hominis sp. nov., Lientehia hominis gen. nov. sp. nov., Merdimmobilis hominis gen. nov. sp. nov., and Paraeggerthella hominis sp. nov., isolated from human faeces
    Rashidin Abdugheni, Dan-Hua Li, Yu-Jing Wang, Meng-Xuan Du, Nan Zhou, Chang Liu, Shuang-Jiang Liu
    International Journal of Systematic and Evolutionary Microbiology.2023;[Epub]     CrossRef
  • Vogesella aquatica sp. nov. and Vogesella margarita sp. nov., isolated from rivers in Southwest China
    Huibin Lu, Li Chen, Lingyang Kong, Linpei Huang, Guangjie Chen
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Dermatobacter hominis gen. nov., sp. nov., a new member of the family Iamiaceae, revealed the potential utilisation of skin-derived metabolites
    HyungWoo Jo, Chaeyun Baek, Young Mok Heo, Hye-Been Kim, Haeun Lee, Seunghyun Kang, Seyoung Mun, Yunseok Oh, Doyeong Ko, Kyudong Han, Raúl Riesco, Martha E. Trujillo, Dong-Geol Lee
    Antonie van Leeuwenhoek.2023; 116(11): 1139.     CrossRef
  • Dynamic Development of Viral and Bacterial Diversity during Grass Silage Preservation
    Johan S. Sáenz, Bibiana Rios-Galicia, Bianca Rehkugler, Jana Seifert
    Viruses.2023; 15(4): 951.     CrossRef
  • Alteromonas gilva sp. nov. and Erythrobacter fulvus sp. nov., isolated from a tidal mudflat
    Sunho Park, Inhyup Kim, Geeta Chhetri, Yoonseop So, Yonghee Jung, Haejin Woo, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Two novel alkalitolerant species Pseudalkalibacillus spartinae sp. nov. and Pseudalkalibacillus sedimenti sp. nov.
    Guo-Hong Liu, Shuang Han, Bing Li, Rui-Li Li, Huai Shi, Qian-Qian Chen, Hend A. Alwathnani, Christopher Rensing, Shun-Gui Zhou
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Description of Brachybacterium sillae sp. nov., a thermophilic bacterium isolated from a hot spring
    Dariimaa Ganbat, DoKyung Oh, Yong-Jik Lee, Dong-Woo Lee, Seong-Bo Kim, Won-Jae Chi, Ki-Eun Lee, Byoung-Hee Lee, You-Jung Jung, Jung-Sook Lee, Sang-Jae Lee
    Antonie van Leeuwenhoek.2023; 116(8): 791.     CrossRef
  • Bacillus mexicanus sp. nov., a biological control bacterium isolated from the common bean (Phaseolus vulgaris L.) crop in Sinaloa, Mexico
    Sergio de los Santos Villalobos, Carmen María Félix Pablos, Valeria Valenzuela Ruiz, Fannie I. Parra Cota
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Genome-centric metagenomic insights into the role of Chloroflexi in anammox, activated sludge and methanogenic reactors
    Patricia Bovio-Winkler, Leandro D. Guerrero, Leonardo Erijman, Pía Oyarzúa, María Eugenia Suárez-Ojeda, Angela Cabezas, Claudia Etchebehere
    BMC Microbiology.2023;[Epub]     CrossRef
  • Potential for homoacetogenesis via the Wood–Ljungdahl pathway in Korarchaeia lineages from marine hydrothermal vents
    Francesca Vulcano, Petra Hribovšek, Emily Olesin Denny, Ida H. Steen, Runar Stokke
    Environmental Microbiology Reports.2023; 15(6): 698.     CrossRef
  • Isolation and characterisation of novel Methanocorpusculum species indicates the genus is ancestrally host-associated
    James G. Volmer, Rochelle M. Soo, Paul N. Evans, Emily C. Hoedt, Ana L. Astorga Alsina, Benjamin J. Woodcroft, Gene W. Tyson, Philip Hugenholtz, Mark Morrison
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  • Thermomonas mangrovi sp. nov., isolated from soil of a mangrove nature reserve
    Shanshan Xu, Junpeng Chen, Si Chen, Qiliang Lai, Zengzhi Liu, Ying Xu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Proposal to transfer Bacillus massiliigorillae to the genus Peribacillus as Peribacillus massiliigorillae comb. nov., and Bacillus sinesaloumensis to the genus Ferdinandcohnia as Ferdinandcohnia sinesaloumensis comb. nov
    Awalagaway Dhulappa, Manik Prabhu Narsing Rao, Haijie Wang, Bhagwan Narayan Rekadwad, Ying-Qian Kang
    Archives of Microbiology.2023;[Epub]     CrossRef
  • Characterization and Antioxidant Activity of Exopolysaccharides Produced by Lysobacter soyae sp. nov Isolated from the Root of Glycine max L.
    Inhyup Kim, Geeta Chhetri, Yoonseop So, Sunho Park, Yonghee Jung, Haejin Woo, Taegun Seo
    Microorganisms.2023; 11(8): 1900.     CrossRef
  • Leucobacter edaphi sp. nov., a highly chromate-tolerant bacterium isolated from chromium containing chemical plant soil
    Bijun Zheng, Zhe Xu, Li Yang, Guangyang Jiang, Jia Chen, Yichen Yang, Yongqiang Tian
    Antonie van Leeuwenhoek.2023; 116(12): 1433.     CrossRef
  • Roseateles albus sp. nov., Roseateles koreensis sp. nov. and Janthinobacterium fluminis sp. nov., isolated from freshwater at Jucheon River, and emended description of Roseateles aquaticus comb. nov.
    Sunho Park, Inhyup Kim, Geeta Chhetri, Yoonseop So, Yonghee Jung, Haejin Woo, Taegun Seo
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Isolation and Genomic Analysis of 3-Chlorobenzoate-Degrading Bacteria from Soil
    Ifat Ara, Ryota Moriuchi, Hideo Dohra, Kazuhide Kimbara, Naoto Ogawa, Masaki Shintani
    Microorganisms.2023; 11(7): 1684.     CrossRef
  • Brytella acorum gen. nov., sp. nov., a novel acetic acid bacterium from sour beverages
    Atena Sadat Sombolestani, Dries Bongaerts, Eliza Depoorter, Ilse Cleenwerck, Anneleen D. Wieme, Scott J. Britton, Stefan Weckx, Luc De Vuyst, Peter Vandamme
    Systematic and Applied Microbiology.2023; 46(5): 126440.     CrossRef
  • Complete genome sequence of Vibrio gazogenes PB1: an estuarine bacterium capable of producing prodigiosin from starch or cellulose
    Bincy Baby, Dhanya Vijay, Pretty S. Philip, Afra A. Alnuaimi, Hessa M. Almansoori, Sarah O. Areidat, Gulfaraz Khan, Ranjit Vijayan, M. Kalim Akhtar
    Frontiers in Marine Science.2023;[Epub]     CrossRef
  • Tianweitania aestuarii sp. nov., isolated from a coastal dune, reclassification of Corticibacterium populi as Tianweitania populi comb. nov., and emended description of the genus Tianweitania
    Ji Hyeon Song, Sooyeon Park, Jung-Sook Lee, Wonyong Kim, Jung-Hoon Yoon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Fluviispira vulneris sp. nov., isolated from human wound secretions
    Peijuan Tang, Na Peng, Pengwen Ouyang, Sheng Long, Zhenhua Wei, Xingchun Chen, Pinghua Qu, Liangyi Xie
    Antonie van Leeuwenhoek.2023; 116(12): 1305.     CrossRef
  • Neorhizobium turbinariae sp. nov., a coral-beneficial bacterium isolated from Turbinaria peltata
    Hao Sun, Zhiyuan Miao, Shuai Liu, Xuerui Liu, Bogui Chen, Baolin Liao, Baohua Xiao
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Description of Salinimicrobium tongyeongense sp. nov., isolated from seawater
    Dariimaa Ganbat, Dong-Woo Lee, Seong-Bo Kim, Yong-Jik Lee, Gaewon Nam, Won-Jae Chi, Byoung-Hee Lee, You-Jung Jung, Jung-Sook Lee, Sang-Jae Lee
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Genomic analysis and characterization of phages infecting the marine Roseobacter CHAB-I-5 lineage reveal a globally distributed and abundant phage genus
    Zefeng Zhang, Zuqing Wu, He Liu, Mingyu Yang, Rui Wang, Yanlin Zhao, Feng Chen
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  • PhaGAA: an integrated web server platform for phage genome annotation and analysis
    Jiawei Wu, Qingrui Liu, Min Li, Jiliang Xu, Chen Wang, Junyin Zhang, Minfeng Xiao, Yannan Bin, Junfeng Xia, Can Alkan
    Bioinformatics.2023;[Epub]     CrossRef
  • Comparative Genomics Reveals Three Genetic Groups of the Whitefly Obligate Endosymbiont Candidatus Portiera aleyrodidarum
    Teng Lei, Ning Luo, Chao Song, Junwei Yu, Yuhang Zhou, Xin Qi, Yinquan Liu
    Insects.2023; 14(11): 888.     CrossRef
  • Roseobacter insulae sp. nov. and Loktanella gaetbuli sp. nov., isolated from tidal flats in the Yellow Sea in Korea
    Eun Bee Lee, Sooyeon Park, Wonyong Kim, Jung-Hoon Yoon
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Novosphingobium mangrovi sp. nov., isolated from mangrove sediment
    Qian Huang, Zhihui Qian, Tao Peng, Jin Li, Xueying Ye, Tongwang Huang, Zhong Hu
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Phylotaxonomic assessment based on four core gene sets and proposal of a genus definition among the families Paracoccaceae and Roseobacteraceae
    Dao-Feng Zhang, Wei He, Zongze Shao, Iftikhar Ahmed, Yuqin Zhang, Wen-Jun Li, Zhe Zhao
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Scleromatobacter humisilvae gen. nov., sp. nov., a novel bacterium isolated from oak forest soil
    Sophie Mieszkin, Blandine Trouche, Julien Ancousture, Youssef Raouf, Stéphane Uroz, Karine Alain
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Comammox Nitrospira and Ammonia-Oxidizing Archaea Are Dominant Ammonia Oxidizers in Sediments of an Acid Mine Lake Containing High Ammonium Concentrations
    Deyong Li, Zhichang Ren, Yangqi Zhou, Lugao Jiang, Min Zheng, Guoqiang Liu, Jennifer B. Glass
    Applied and Environmental Microbiology.2023;[Epub]     CrossRef
  • Citrobacter sp. Y3 harbouring novel gene HBCD-hd-1 mineralizes hexabromocyclododecane via new metabolic pathways according to multi-omics characterization
    Xingxing Peng, Tianyu Li, Qihang Zheng, Yingyuan Lu, Yuzhe He, Yetao Tang, Rongliang Qiu
    Journal of Hazardous Materials.2023; 442: 130071.     CrossRef
  • Opacimonas viscosa gen. nov., sp. nov., a novel bacterium isolated from phycosphere
    Xuanru Lin, Runlin Cai, Guanjing Cai, Jianmin Xie, Zhenyuan Zhou, Hui Wang
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Description of Microbacterium neungamense sp. nov. isolated from a hot spring
    Dariimaa Ganbat, Ga Eul Jeong, DoKyung Oh, Dong-Woo Lee, Yong-Jik Lee, Seong-Bo Kim, In-Tae Cha, Won-Jae Chi, Seul-Ki Park, Jung-Sook Lee, Sang-Jae Lee
    Archives of Microbiology.2023;[Epub]     CrossRef
  • Habitat distribution of the genus Belliella in continental waters and the description of Belliella alkalica sp. nov., Belliella calami sp. nov. and Belliella filtrata sp. nov.
    Kristóf Korponai, Sára Szuróczki, Zsuzsanna Márton, Attila Szabó, Paula V. Morais, Diogo Neves Proença, Erika Tóth, Emil Boros, Károly Márialigeti, Tamás Felföldi
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Molecular Characterization of Indigenous Rhizobia from Kenyan Soils Nodulating with Common Beans
    Clabe Wekesa, Kelvin Kiprotich, Patrick Okoth, George O. Asudi, John O. Muoma, Alexandra C. U. Furch, Ralf Oelmüller
    International Journal of Molecular Sciences.2023; 24(11): 9509.     CrossRef
  • Putative novel hydrogen- and iron-oxidizing sheath-producing Zetaproteobacteria thrive at the Fåvne deep-sea hydrothermal vent field
    Petra Hribovšek, Emily Olesin Denny, Håkon Dahle, Achim Mall, Thomas Øfstegaard Viflot, Chanakan Boonnawa, Eoghan P. Reeves, Ida Helene Steen, Runar Stokke, Michael S. Rappe
    mSystems.2023;[Epub]     CrossRef
  • Thiovibrio frasassiensis gen. nov., sp. nov., an autotrophic, elemental sulphur disproportionating bacterium isolated from sulphidic karst sediment, and proposal of Thiovibrionaceae fam. nov.
    Heidi S. Aronson, Cais Thomas, Maia K. Bhattacharyya, Shaan R. Eckstein, Sophia R. Jensen, Roman A. Barco, Jennifer L. Macalady, Jan P. Amend
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Hufsiella ginkgonis gen. nov., sp. nov. and Hufsiella arboris sp. nov., isolated from tree barks
    Heeyoung Kang, Seokhyeon Bae, Haneul Kim, Kiseong Joh
    International Journal of Systematic and Evolutionary Microbiology .2023;[Epub]     CrossRef
  • Phenotypic and genomic characterization of the first alkaliphilic aceticlastic methanogens and proposal of a novel genus Methanocrinis gen.nov. within the family Methanotrichaceae
    Maria A. Khomyakova, Alexander Y. Merkel, Alexander I. Slobodkin, Dimitry Y. Sorokin
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  • Description of Xanthocytophaga agilis sp. nov. and Xanthocytophaga flavus sp. nov. of the new genus Xanthocytophaga gen. nov and the proposal of Rhodocytophagaceae fam. nov. within the order Cytophagales
    Xianjiao Zhang, Guang-Da Feng, Yang Liu, Fan Yang, Yanxuan Li, Xiaoqin Deng, Honghui Zhu, Qing Yao
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  • Draft genome sequence of Joostella atrarenae M1-2T with cellulolytic and hemicellulolytic ability
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Inhibitory Effect of Methyl Gallate and Gallic Acid on Oral Bacteria
Mi-Sun Kang , Jong-Suk Oh , In-Chol Kang , Suk-Jin Hong , Choong-Ho Choi
J. Microbiol. 2008;46(6):744-750.   Published online December 24, 2008
DOI: https://doi.org/10.1007/s12275-008-0235-7
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AbstractAbstract
This study examined the ability of methyl gallate (MG) and gallic acid (GA), the main compounds of gallotannins in Galla Rhois, to inhibit the proliferation of oral bacterial and the in vitro formation of Streptococcus mutans biofilms. The antimicrobial activities of these compounds were evaluated in vitro using the broth microdilution method and a beaker-wire test. Both MG and GA had inhibitory effects on the growth of cariogenic (MIC<8 mg/ml) and periodontopathic bacteria (MIC=1 mg/ml). Moreover, these compounds significantly inhibited the in vitro formation of S. mutans biofilms (MG, 1 mg/ml; GA, 4 mg/ml; P<0.05). MG was more effective in inhibiting bacterial growth and the formation of S. mutans biofilm than GA. In conclusion, MG and GA can inhibit the growth of oral pathogens and S. mutans biofilm formation, and may be used to prevent the formation of oral biofilms.

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Review
REVIEW] Interaction of Candida albicans with host cells: virulence factors, host defense, escape strategies, and the microbiota
Sarah Höfs , Selene Mogavero , Bernhard Hube
J. Microbiol. 2016;54(3):149-169.   Published online February 27, 2016
DOI: https://doi.org/10.1007/s12275-016-5514-0
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AbstractAbstract
The interaction between Candida albicans and its host cells is characterized by a complex interplay between the expression of fungal virulence factors, which results in adherence, invasion and cell damage, and the host immune system, which responds by secreting proinflammatory cytokines, activating antimicrobial activities and killing the fungal pathogen. In this review we describe this interplay by taking a closer look at how C. albicans pathogenicity is induced and executed, how the host responds in order to prevent and clear an infection, and which mechanisms C. albicans has evolved to bypass these immune responses to avoid clearance. Furthermore, we review studies that show how the presence of other microorganisms affects this interplay.

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Journal Article
UBCG2: Up-to-date bacterial core genes and pipeline for phylogenomic analysis
Jihyeon Kim , Seong-In Na , Dongwook Kim , Jongsik Chun
J. Microbiol. 2021;59(6):609-615.   Published online May 29, 2021
DOI: https://doi.org/10.1007/s12275-021-1231-4
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AbstractAbstract
Phylogenomic tree reconstruction has recently become a routine and critical task to elucidate the evolutionary relationships among bacterial species. The most widely used method utilizes the concatenated core genes, universally present in a single-copy throughout the bacterial domain. In our previous study, a bioinformatics pipeline termed Up-to-date Bacterial Core Genes (UBCG) was developed with a set of bacterial core genes selected from 1,429 species covering 28 phyla. In this study, we revised a new bacterial core gene set, named UBCG2, that was selected from the more extensive genome sequence set belonging to 3,508 species spanning 43 phyla. UBCG2 comprises 81 genes with nine Clusters of Orthologous Groups of proteins (COGs) functional categories. The new gene set and complete pipeline are available at http://leb.snu.ac.kr/ubcg2.

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  • Rhizobium aouanii sp. nov., efficient nodulating rhizobia isolated from Acacia saligna roots in Tunisia
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  • Paralimibaculum aggregatum gen. nov. sp. nov. and Biformimicrobium ophioploci gen. nov. sp. nov., two novel heterotrophs from brittle star Ophioplocus japonicus
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  • Characterization and Genomic Analysis of Affinirhizobium gouqiense sp. nov. Isolated from Seawater of Gouqi Island Located in the East China Sea and Reclassification of Rhizobium lemnae to the Genus Affinirhizobium as Affinirhizobium lemnae comb. nov.
    Min He, Gen Chen, Ke-Jing Li, Xing-Xing Tang, Xiao-Xiao Liu, Chang-Bin Ren, Hou-Hong Liu, Hai Luo, Sanjit Chandra Debnath, Pin-Mei Wang, Hai-Xin Chen, Dao-Qiong Zheng
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  • Eubacterium album sp. nov., a butyrate-producing bacterium isolated from faeces of a healthy human
    Feng-Lan Liu, Rashidin Abdugheni, Cong-Guo Ran, Nan Zhou, Shuang-Jiang Liu
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  • Lentzea sokolovensis sp. nov., Lentzea kristufekii sp. nov. and Lentzea miocenica sp. nov., rare actinobacteria from Miocene lacustrine sediment of the Sokolov Coal Basin, Czech Republic
    Ana Catalina Lara, Lucie Kotrbová, Moritz Keller, Imen Nouioui, Meina Neumann-Schaal, Yvonne Mast, Alica Chroňáková
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  • Genome Sequencing Unveils Nomadic Traits of Lactiplantibacillus plantarum in Japanese Post-Fermented Tea
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  • Genome-guided isolation of the hyperthermophilic aerobe Fervidibacter sacchari reveals conserved polysaccharide metabolism in the Armatimonadota
    Nancy O. Nou, Jonathan K. Covington, Dengxun Lai, Xavier Mayali, Cale O. Seymour, Juliet Johnston, Jian-Yu Jiao, Steffen Buessecker, Damon Mosier, Alise R. Muok, Nicole Torosian, Allison M. Cook, Ariane Briegel, Tanja Woyke, Emiley Eloe-Fadrosh, Nicole Sh
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    Jong-Shian Liou, Wei-Ling Zhang, Li-Wen Hsu, Chih-Chieh Chen, Yu-Ting Wang, Koji Mori, Kohei Hidaka, Moriyuki Hamada, Lina Huang, Koichi Watanabe, Chien-Hsun Huang
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    Roukaya Ben Gaied, Imed Sbissi, Mohamed Tarhouni, Katharina Huber, Jacqueline Wolf, Meina Neumann-Schaal, Imen Nouioui, Faten Ghodhbane-Gtari, Maher Gtari
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  • Genomic and phenotypic characterization of 26 novel marine bacterial strains with relevant biogeochemical roles and widespread presence across the global ocean
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  • Taxonomic and genomic characterization of a siderophore-producing bacterium, Rhodoligotrophos ferricapiens sp. nov isolated from lettuce cultivation soil
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  • Luteibacter sahnii sp. nov., A Novel Yellow-Colored Xanthomonadin Pigment Producing Probiotic Bacterium from Healthy Rice Seed Microbiome
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  • Jatrophihabitans cynanchi sp. nov., isolated from rhizosphere soil of Cynanchum wilfordii
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  • Bifidobacterium apicola sp. nov., isolated from the gut of honeybee (Apis mellifera)
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  • Chengkuizengella axinellae sp. nov., a symbiotic bacterium isolated from a marine sponge of the genus Axinella
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  • Kribbella caucasensis sp. nov. from the Soil of the North Caucasus Mountains
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  • Peptostreptococcus equinus sp. nov., isolated from horse faeces
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  • Aurantiacibacter poecillastricola sp. nov., Isolated from the Marine Sponge, Poecillastra wondoensis, and Reclassification of Erythrobacter alti as Aurantiacibacter alti comb. nov.
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  • Philodulcilactobacillus myokoensis gen. nov., sp. nov., a fructophilic, acidophilic, and agar-phobic lactic acid bacterium isolated from fermented vegetable extracts
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  • Comparative Genomic Analysis and BTEX Degradation Pathways of a Thermotolerant Cupriavidus cauae PHS1
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  • Atopomonas sediminilitoris sp. nov., isolated from beach sediment of Zhairuo Island, China
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  • Chryseobacterium paludis sp. nov. and Chryseobacterium foetidum sp. nov. Isolated from the Aquatic Environment, South Korea
    Miryung Kim, Yong-Seok Kim, Chang-Jun Cha
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    Ju Hye Baek, Sylvia Kristyanto, Jeong Min Kim, Dong Min Han, Zhe-Xue Quan, Che Ok Jeon
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    Yea-Lin Moon, Kyung-Hyun Kim, Jin-Sook Park
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  • UFCG: database of universal fungal core genes and pipeline for genome-wide phylogenetic analysis of fungi
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  • Ancient Rapid Radiation Explains Most Conflicts Among Gene Trees and Well-Supported Phylogenomic Trees of Nostocalean Cyanobacteria
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  • Comparative genomics reveals environmental adaptability and antimicrobial activity of a novel Streptomyces isolated from soil under black Gobi rocks
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    Antonie van Leeuwenhoek.2023; 116(12): 1407.     CrossRef
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    James T. Tambong, Renlin Xu, Maria Constanza Fleitas, Lipu Wang, Keith Hubbard, Randy Kutcher
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  • Microvirga terrae sp. nov., Isolated from Soil
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  • Incidence, genetic diversity, and antimicrobial resistance profiles of Vibrio parahaemolyticus in seafood in Bangkok and eastern Thailand
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  • Streptomonospora mangrovi sp. nov., isolated from mangrove soil showing similar metabolic capabilities, but distinct secondary metabolites profiles
    Cheng Zhen, Xin-Kai Chen, Xian-Feng Ge, Wen-Zheng Liu
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  • Alkalicoccobacillus porphyridii sp. nov., isolated from a marine red alga, reclassification of Shouchella plakortidis and Shouchella gibsonii as Alkalicoccobacillus plakortidis comb. nov. and Alkalicoccobacillus gibsonii comb. nov., and emend
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  • UACG: Up-to-Date Archaeal Core Genes and Software for Phylogenomic Tree Reconstruction
    Seong-In Na, Michael James Bailey, Mauricio Chalita, Jae Hyoung Cho, Jongsik Chun
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  • Alishewanella maricola sp. nov., isolated from seawater of the Yellow Sea
    Kyung Hyun Kim, Jeong Min Kim, Hyun Mi Jin, Lujiang Hao, Che Ok Jeon
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  • Cutibacterium equinum sp. nov., isolated from horse faeces
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  • Sugar Concentration, Nitrogen Availability, and Phylogenetic Factors Determine the Ability of Acinetobacter spp. and Rosenbergiella spp. to Grow in Floral Nectar
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Reviews
REVIEW] Mind-altering with the gut: Modulation of the gut-brain axis with probiotics
Namhee Kim , Misun Yun , Young Joon Oh , Hak-Jong Choi
J. Microbiol. 2018;56(3):172-182.   Published online February 28, 2018
DOI: https://doi.org/10.1007/s12275-018-8032-4
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AbstractAbstract
It is increasingly evident that bidirectional interactions exist among the gastrointestinal tract, the enteric nervous system, and the central nervous system. Recent preclinical and clinical trials have shown that gut microbiota plays an important role in these gut-brain interactions. Furthermore, alterations in gut microbiota composition may be associated with pathogenesis of various neurological disorders, including stress, autism, depression, Parkinson’s disease, and Alzheimer’s disease. Therefore, the concepts of the microbiota-gut-brain axis is emerging. Here, we review the role of gut microbiota in bidirectional interactions between the gut and the brain, including neural, immune-mediated, and metabolic mechanisms. We highlight recent advances in the understanding of probiotic modulation of neurological and neuropsychiatric disorders via the gut-brain axis.

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REVIEW] Mechanisms of Synergy in Polymicrobial Infections
Justine L. Murray , Jodi L. Connell , Apollo Stacy , Keith H. Turner , Marvin Whiteley
J. Microbiol. 2014;52(3):188-199.   Published online March 1, 2014
DOI: https://doi.org/10.1007/s12275-014-4067-3
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AbstractAbstract
Communities of microbes can live almost anywhere and contain many different species. Interactions between members of these communities often determine the state of the habitat in which they live. When these habitats include sites on the human body, these interactions can affect health and disease. Polymicrobial synergy can occur during infection, in which the combined effect of two or more microbes on disease is worse than seen with any of the individuals alone. Powerful genomic methods are increasingly used to study microbial communities, including metagenomics to reveal the members and genetic content of a community and metatranscriptomics to describe the activities of community members. Recent efforts focused toward a mechanistic understanding of these interactions have led to a better appreciation of the precise bases of polymicrobial synergy in communities containing bacteria, eukaryotic microbes, and/or viruses. These studies have benefited from advances in the development of in vivo models of polymicrobial infection and modern techniques to profile the spatial and chemical bases of intermicrobial communication. This review describes the breadth of mechanisms microbes use to interact in ways that impact pathogenesis and techniques to study polymicrobial communities.

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Journal Article
Soil pH and electrical conductivity are key edaphic factors shaping bacterial communities of greenhouse soils in Korea
Jeong Myeong Kim , An-Sung Roh , Seung-Chul Choi , Eun-Jeong Kim , Moon-Tae Choi , Byung-Koo Ahn , Sun-Kuk Kim , Young-Han Lee , Jae-Ho Joa , Seong-Soo Kang , Shin Ae Lee , Jae-Hyung Ahn , Jaekyeong Song , Hang-Yeon Weon
J. Microbiol. 2016;54(12):838-845.   Published online November 26, 2016
DOI: https://doi.org/10.1007/s12275-016-6526-5
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AbstractAbstract
Soil microorganisms play an essential role in soil ecosystem processes such as organic matter decomposition, nutrient cycling, and plant nutrient availability. The land use for greenhouse cultivation has been increasing continuously, which involves an intensive input of agricultural materials to enhance productivity; however, relatively little is known about bacterial communities in greenhouse soils. To assess the effects of environmental factors on the soil bacterial diversity and community composition, a total of 187 greenhouse soil samples collected across Korea were subjected to bacterial 16S rRNA gene pyrosequencing analysis. A total of 11,865 operational taxonomic units at a 97% similarity cutoff level were detected from 847,560 sequences. Among nine soil factors evaluated; pH, electrical conductivity (EC), exchangeable cations (Ca2+, Mg2+, Na+, and K+), available P2O5, organic matter, and NO3-N, soil pH was most strongly correlated with bacterial richness (polynomial regression, pH: R2 = 0.1683, P < 0.001) and diversity (pH: R2 = 0.1765, P < 0.001). Community dissimilarities (Bray-Curtis distance) were positively correlated with Euclidean distance for pH and EC (Mantel test, pH: r = 0.2672, P < 0.001; EC: r = 0.1473, P < 0.001). Among dominant phyla (> 1%), the relative abundances of Proteobacteria, Gemmatimonadetes, Acidobacteria, Bacteroidetes, Chloroflexi, and Planctomycetes were also more strongly correlated with pH and EC values, compared with other soil cation contents, such as Ca2+, Mg2+, Na+, and K+. Our results suggest that, despite the heterogeneity of various environmental variables, the bacterial communities of the intensively cultivated greenhouse soils were particularly influenced by soil pH and EC. These findings therefore shed light on the soil microbial ecology of greenhouse cultivation, which should be helpful for devising effective management strategies to enhance soil microbial diversity and improving crop productivity.

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Reviews
REVIEW] When a Virus is not a Parasite: The Beneficial Effects of Prophages
Joseph Bondy-Denomy , Alan R. Davidson
J. Microbiol. 2014;52(3):235-242.   Published online March 1, 2014
DOI: https://doi.org/10.1007/s12275-014-4083-3
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AbstractAbstract
Most organisms on the planet have viruses that infect them. Viral infection may lead to cell death, or to a symbiotic relationship where the genomes of both virus and host replicate together. In the symbiotic state, both virus and cell potentially experience increased fitness as a result of the other. The viruses that infect bacteria, called bacteriophages (or phages), well exemplify the symbiotic relationships that can develop between viruses and their host. In this review, we will discuss the many ways that prophages, which are phage genomes integrated into the genomes of their hosts, influence bacterial behavior and virulence.

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[Minireview] Antibiofilm agents: A new perspective for antimicrobial strategy
Xi-Hui Li , Joon-Hee Lee
J. Microbiol. 2017;55(10):753-766.   Published online September 28, 2017
DOI: https://doi.org/10.1007/s12275-017-7274-x
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AbstractAbstract
Biofilms are complex microbial architectures that attach to surfaces and encase microorganisms in a matrix composed of self-produced hydrated extracellular polymeric substances (EPSs). In biofilms, microorganisms become much more resistant to antimicrobial treatments, harsh environmental conditions, and host immunity. Biofilm formation by microbial pathogens greatly enhances survival in hosts and causes chronic infections that result in persistent inflammation and tissue damages. Currently, it is believed over 80% of chronic infectious diseases are mediated by biofilms, and it is known that conventional antibiotic medications are inadequate at eradicating these biofilm-mediated infections. This situation demands new strategies for biofilm-associated infections, and currently, researchers focus on the development of antibiofilm agents that are specific to biofilms, but are nontoxic, because it is believed that this prevents the development of drug resistance. Here, we review the most promising antibiofilm agents undergoing intensive research and development.

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REVIEW] Transcriptional Regulatory Elements in Fungal Secondary Metabolism
Wenbing Yin , Nancy P. Keller
J. Microbiol. 2011;49(3):329-339.   Published online June 30, 2011
DOI: https://doi.org/10.1007/s12275-011-1009-1
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AbstractAbstract
Filamentous fungi produce a variety of secondary metabolites of diverse beneficial and detrimental activities to humankind. The genes required for a given secondary metabolite are typically arranged in a gene cluster. There is considerable evidence that secondary metabolite gene regulation is, in part, by transcriptional control through hierarchical levels of transcriptional regulatory elements involved in secondary metabolite cluster regulation. Identification of elements regulating secondary metabolism could potentially provide a means of increasing production of beneficial metabolites, decreasing production of detrimental metabolites, aid in the identification of ‘silent’ natural products and also contribute to a broader understanding of molecular mechanisms by which secondary metabolites are produced. This review summarizes regulation of secondary metabolism associated with transcriptional regulatory elements from a broad view as well as the tremendous advances in discovery of cryptic or novel secondary metabolites by genomic mining.

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