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- Biological and Chemical Approaches for Controlling Harmful Microcystis Blooms
- Wonjae Kim, Yerim Park, Jaejoon Jung, Che Ok Jeon, Masanori Toyofuku, Jiyoung Lee, Woojun Park
- J. Microbiol. 2024;62(3):249-260. Published online April 8, 2024
- DOI: https://doi.org/10.1007/s12275-024-00115-2
- 459 View
- 15 Download
- 13 Web of Science
- 13 Crossref
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Abstract
PDF - The proliferation of harmful cyanobacterial blooms dominated by Microcystis aeruginosa has become an increasingly serious problem in freshwater ecosystems due to climate change and eutrophication. Microcystis-blooms in freshwater generate compounds with unpleasant odors, reduce the levels of dissolved O2, and excrete microcystins into aquatic ecosystems, potentially harming various organisms, including humans. Various chemical and biological approaches have thus been developed to mitigate the impact of the blooms, though issues such as secondary pollution and high economic costs have not been adequately addressed. Red clays and H2O2 are conventional treatment methods that have been employed worldwide for the mitigation of the blooms, while novel approaches, such as the use of plant or microbial metabolites and antagonistic bacteria, have also recently been proposed. Many of these methods rely on the generation of reactive oxygen species, the inhibition of photosynthesis, and/or the disruption of cellular membranes as their mechanisms of action, which may also negatively impact other freshwater microbiota. Nevertheless, the underlying molecular mechanisms of anticyanobacterial chemicals and antagonistic bacteria remain unclear. This review thus discusses both conventional and innovative approaches for the management of M. aeruginosa in freshwater bodies.
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Citations
Citations to this article as recorded by
- Strong inhibitory effects of Desmodesmus sp. on Microcystis blooms: Potential as a biological control agent in aquaculture
Bo Yang, Yuhua Li, Zihan Wang, Zhiguang Yue, Junqi Wen, Xueqin Zhao, Hu Zhang, Xianfeng Wang, Xiufen Wang, Man Zhang
Aquaculture Reports.2025; 40: 102579. CrossRef - Field-scale artificial floating islands reduces cyanotoxin from residential raw sewage treatment basin
Zhaozhe Chen, Jiyoung Lee, Molly Mills, Abigail Volk, Ozeas S. Costa
Ecological Engineering.2025; 212: 107543. CrossRef - HABS-BLOCKS© Inhibited Microcystis and Planktothrix and Reduced Microcystin Concentrations in a Lake Water Mesocosm Study
Cameron Gastaldo, Stephen Vesper
Microorganisms.2025; 13(5): 1074. CrossRef - Synergistic radical-mediated algal inactivation via FeMoS2/ZnO-persulfate visible-light photocatalysis
Yingjian Ma, Yuxuan Tian, Ning Ding, Hong Liu
Composites Part B: Engineering.2025; 305: 112740. CrossRef - Isolation of a Novel Streptomyces sp. TH05 with Potent Cyanocidal Effects on Microcystis aeruginosa
Xuhan Wang, Siqi Zhu, Shenchen Tao, Shaoyong Zhang, Ruijun Wang, Liqin Zhang
Toxins.2025; 17(7): 354. CrossRef - Public goods-mediated bacterial interplay in aquatic ecosystems
Yerim Park, Wonjae Kim, Jihye Bae, Woojun Park
Water Research.2025; 287: 124310. CrossRef - Molecular mechanisms underlying the bloom-forming cyanobacterium Microcystis defence against predation by flagellates
Yan Chen, Xiao Zhang, Xinyang Bai, Yonglan Xu, Hangzhou Xu, Li Li
Journal of Water Process Engineering.2025; 77: 108611. CrossRef - Utilizing allelopathy from the invasive plant Solidago canadensis to control Microcystis aeruginosa blooms: An integrated metabolomic and bioassay approach
Miao Wu, Huiyuan Liu, Jiaxin Shen, Zhaohui Xie, Siyuan Yang, Jiahui Guo, Yijiang Liu, Huiting Lian, Dingli Wang
Journal of Hazardous Materials.2025; 499: 140043. CrossRef - Artificial Intelligence-Based Microfluidic Platform for Detecting Contaminants in Water: A Review
Yihao Zhang, Jiaxuan Li, Yu Zhou, Xu Zhang, Xianhua Liu
Sensors.2024; 24(13): 4350. CrossRef - Alleviation of H2O2 toxicity by extracellular catalases in the phycosphere of Microcystis aeruginosa
Yerim Park, Wonjae Kim, Yeji Cha, Minkyung Kim, Woojun Park
Harmful Algae.2024; 137: 102680. CrossRef - Extensive Genomic Rearrangement of Catalase-Less Cyanobloom-Forming Microcystis aeruginosa in Freshwater Ecosystems
Minkyung Kim, Jaejoon Jung, Wonjae Kim, Yerim Park, Che Ok Jeon, Woojun Park
Journal of Microbiology.2024; 62(11): 933. CrossRef - Laboratory-Simulated Inhibitory Effects of the Floating-Bed Plants on Microcystis aeruginosa and Their Microbial Communities’ Responses to Microcystins
Shuwen Zhang, Yuanpu Sha, Yuanyuan Tang, Longjie Li, Feihu Wang, Jing Dong, Xuejun Li, Yunni Gao, Xiaofei Gao, Huatao Yuan, Jingxiao Zhang
Microorganisms.2024; 12(10): 2035. CrossRef - Host-Associated Microbiome
Woo Jun Sul
Journal of Microbiology.2024; 62(3): 135. CrossRef
- Strong inhibitory effects of Desmodesmus sp. on Microcystis blooms: Potential as a biological control agent in aquaculture
- Coordinated regulation of interferon and inflammasome signaling pathways by SARS-CoV-2 proteins
- Na-Eun Kim , Yoon-Jae Song
- J. Microbiol. 2022;60(3):300-307. Published online January 28, 2022
- DOI: https://doi.org/10.1007/s12275-022-1502-8
- 291 View
- 0 Download
- 5 Web of Science
- 5 Crossref
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Abstract
PDF
- Type I and III interferons (IFNs) and the nucleotide-binding domain (NBD) leucine-rich repeat (LRR)-containing receptor (NLR) family pyrin domain containing 3 (NLRP3) inflammasome play pivotal roles in the pathogenesis of SARS-CoV-2. While optimal IFN and inflammasome responses are essential for limiting SARS-CoV-2 infection, aberrant activation of these innate immune responses is associated with COVID-19 pathogenesis. In this review, we focus our discussion on recent findings on SARS-CoV-2-induced type I and III IFNs and NLRP3 inflammasome responses and the viral proteins regulating these mechanisms.
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Citations
Citations to this article as recorded by- The impact of polymorphic variants of interferon receptor genes on COVID-19 severity and antibiotic resistance
E. A. Krieger, O. V. Samodova, O. A. Svitich, R. V. Samoilikov, E. A. Meremianina, L. V. Ivanova, N. A. Bebyakova, E. N. Ilina, A. V. Pavlenko, Yu. I. Esin, A. L. Arkhipova, S. N. Kovalchuk, A. V. Kudryavtsev
Russian Journal of Infection and Immunity.2024; 13(6): 1027. CrossRef - SARS-CoV-2 ORF8 as a Modulator of Cytokine Induction: Evidence and Search for Molecular Mechanisms
Marília Inês Móvio, Giovana Waner Carneiro de Almeida, Isabella das Graças Lopes Martines, Gilmara Barros de Lima, Sergio Daishi Sasaki, Alexandre Hiroaki Kihara, Emma Poole, Michael Nevels, Maria Cristina Carlan da Silva
Viruses.2024; 16(1): 161. CrossRef - Sensing of viral lung infections by cGAS-STING
Lei Fang, Michael Roth
Exploration of Immunology.2022; : 303. CrossRef - Two years of COVID-19 pandemic: where are we now?
Jinjong Myoung
Journal of Microbiology.2022; 60(3): 235. CrossRef - The Potential of Purinergic Signaling to Thwart Viruses Including SARS-CoV-2
Davide Ferrari, Michele Rubini, Jorge S. Burns
Frontiers in Immunology.2022;[Epub] CrossRef
- The impact of polymorphic variants of interferon receptor genes on COVID-19 severity and antibiotic resistance
Journal Articles
- Geographic diversity in Helicobacter pylori oipA genotype between Korean and United States isolates
- Aeryun Kim , Jing Lai , D. Scott Merrell , Ji-Hye Kim , Hanfu Su , Jeong-Heon Cha
- J. Microbiol. 2021;59(12):1125-1132. Published online October 31, 2021
- DOI: https://doi.org/10.1007/s12275-021-1450-8
- 261 View
- 0 Download
- 4 Web of Science
- 3 Crossref
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Abstract
PDF
- Helicobacter pylori outer membrane inflammatory protein A (OipA) was originally named for its role in inducing inflammation in the host, as evidenced by high mucosal IL-8 levels. Expression of OipA is regulated by phase variation of a CT dinucleotide-repeat located in the 5region of the gene. However, little is known about OipA geographic diversity across isolates. To address this gap, we conducted a large-scale molecular epidemiologic analysis using H. pylori clinical isolates obtained from two geographically distinct populations: Korea and the United States (US). Most Korean isolates (98.7%) possessed two copies of oipA located at two specific loci (A and B) while all US isolates contained only one copy of oipA at locus A. Furthermore, most Korean oipA (94.8%) possessed three or less CT repeats while most US oipA (96.6%) contained five or more CT repeats. Among the two copies, all Korean H. pylori possessed at least one oipA ‘on’ phase variant while the single copy of oipA in US isolates showed 56.2% ‘on’ and 43.8% ‘off.’ Thus, host differences seem to have driven geographic diversification of H. pylori across these populations such that OipA expression in US isolates is still regulated by phase variation with 5 or more CT repeats, while Korean isolates always express OipA; duplication of the oipA combined with a reduction of CT repeats to three or less ensures continued expression. En masse, these findings suggest that diversity in the oipA gene copy number, CT repeats, and phase variation among H. pylori from different populations may confer a benefit in adaptation to particular host populations.
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Citations
Citations to this article as recorded by-
Pathogenicity and virulence of
Helicobacter pylori
: A paradigm of chronic infection
Marguerite Clyne, Tadhg Ó Cróinín
Virulence.2025;[Epub] CrossRef - Genetic diversity of the oipA gene among Helicobacter pylori isolates and clinical outcome in Vietnam
Thi Hong Nhung Thai, Hong Phong Nguyen, Thi Hai Yen Nguyen, Thi Be Hai Nguyen, Thai Hoa Nguyen, Thi Mai Ngan Nguyen, Thi Minh Thi Ha
Infection, Genetics and Evolution.2023; 112: 105438. CrossRef - Characterization of East-Asian Helicobacter pylori encoding Western EPIYA-ABC CagA
Kavinda Tissera, Myeong-A Kim, Jing Lai, Sacheera Angulmaduwa, Aeryun Kim, D. Scott Merrell, Ji-Hye Kim, Hanfu Su, Jeong-Heon Cha
Journal of Microbiology.2022; 60(2): 207. CrossRef
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Pathogenicity and virulence of
Helicobacter pylori
: A paradigm of chronic infection
- Pedobacter aquicola sp. nov., isolated from freshwater
- Yochan Joung , Hye-jin Jang , Miri Park , Jaeho Song , Jang-Cheon Cho
- J. Microbiol. 2018;56(7):478-484. Published online June 14, 2018
- DOI: https://doi.org/10.1007/s12275-018-7499-3
- 268 View
- 0 Download
- 11 Crossref
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Abstract
PDF
- A non-motile, pink-pigmented bacterial strain designated IMCC25679T, was isolated from freshwater Lake Chungju of Korea. Phylogenetic trees based on 16S rRNA gene sequences showed that the strain IMCC25679T formed a lineage within the genus Pedobacter. The strain IMCC25679T was closely related to Pedobacter daechungensis Dae 13T (96.4% sequence similarity), Pedobacter rivuli HME8457T (95.3%) and Pedobacter lentus DS-40T (94.3%). The major fatty acids of IMCC- 25679T were iso-C15:0, iso-C16:0 and summed feature 3 (comprising C16:1 ω6c and/or C16:1 ω7c). The major respiratory quinone was MK-7. The major polar lipids were phosphatidylethanolamine (PE), an unidentified sphingolipid (SL), an unidentified aminolipid (AL) and three unidentified polar lipids (PL). The DNA G + C content of IMCC25679T was 32.2 mol%. Based on the evidence presented in this study, the strain IMCC25679T represents a novel species within the genus Pedobacter, with the proposed name Pedobacter aquicola, sp. nov. The type strain is IMCC25679T (= KACC 19486T = NBRC113131T).
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Citations
Citations to this article as recorded by- Genome-Based Classification of Pedobacter albus sp. nov. and Pedobacter flavus sp. nov. Isolated from Soil
Nhan Le Thi Tuyet, Jaisoo Kim
Diversity.2024; 16(5): 292. CrossRef - Pedobacter rhodius sp. nov. and Pedobacter punctiformis sp. nov., isolated from soil
Haejin Woo, Geeta Chhetri, Inhyup Kim, Yoonseop So, Sunho Park, Yonghee Jung, Taegun Seo
Antonie van Leeuwenhoek.2024;[Epub] CrossRef - Screening of potential microbial markers for lung cancer using metagenomic sequencing
Qiang Chen, Kai Hou, Mingze Tang, Shuo Ying, Xiaoyun Zhao, Guanhua Li, Jianhui Pan, Xiaomin He, Han Xia, Yuechuan Li, Zheng Lou, Li Zhang
Cancer Medicine.2023; 12(6): 7127. CrossRef - Pedobacter aquae sp. nov., a multi-drug resistant bacterium isolated from fresh water
Le Tran Tien Chau, Yong-Seok Kim, Chang-Jun Cha
Antonie van Leeuwenhoek.2022; 115(3): 445. CrossRef -
Pedobacter riviphilus sp. nov., isolated from stream sediment
Hong Sik Im, Yochan Joung, Sang-Seob Lee
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef - Complete Genome Sequence of Pedobacter sp. PAMC26386 and Their Low Temperature Application in Arabinose-containing Polysaccharides Degradation
Cya-Yong Cho, So-Ra Han, Tae-Jin Oh
Current Microbiology.2021; 78(3): 944. CrossRef - List of new names and new combinations previously effectively, but not validly, published
Aharon Oren, George Garrity
International Journal of Systematic and Evolutionary Microbiology .2020; 70(7): 4043. CrossRef - Pedobacter indicus sp. nov., isolated from deep-sea sediment
Xiao-yan He, Na Li, Xiu-lan Chen, Yu-zhong Zhang, Xi-ying Zhang, Xiao-yan Song
Antonie van Leeuwenhoek.2020; 113(3): 357. CrossRef -
Leeia aquatica sp. nov., isolated from freshwater
Jaeho Song, Yochan Joung, Shan-Hui Li, Juchan Hwang, Jang-Cheon Cho
International Journal of Systematic and Evolutionary Microbiology .2020; 70(11): 5848. CrossRef -
Sphingobacterium chungjuense sp. nov., isolated from a freshwater lake
Jaeho Song, Yochan Joung, Shan-Hui Li, Juchan Hwang, Jang-Cheon Cho
International Journal of Systematic and Evolutionary Microbiology .2020; 70(12): 6126. CrossRef -
Rhodoferax lacus sp. nov., isolated from a large freshwater lake
Miri Park, Jaeho Song, Gi Gyun Nam, Jang-Cheon Cho
International Journal of Systematic and Evolutionary Microbiology .2019; 69(10): 3135. CrossRef
- Genome-Based Classification of Pedobacter albus sp. nov. and Pedobacter flavus sp. nov. Isolated from Soil
Review
- MINIREVIEW] Toxin-producing Cyanobacteria in Freshwater: A Review of the Problems, Impact on Drinking Water Safety, and Efforts for Protecting Public Health
- Melissa Y. Cheung , Song Liang , Jiyoung Lee
- J. Microbiol. 2013;51(1):1-10. Published online March 2, 2013
- DOI: https://doi.org/10.1007/s12275-013-2549-3
- 156 View
- 0 Download
- 176 Crossref
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Abstract
PDF
- Cyanobacteria have adapted to survive in a variety of environments and have been found globally. Toxin-producing cyanobacterial harmful algal blooms (CHABs) have been increasing in frequency worldwide and pose a threat to drinking and recreational water. In this study, the prevalence, impact of CHABs and mitigation efforts were reviewed, focusing on the Lake Erie region and Ohio’s inland lakes that have been impacted heavily as an example so that the findings can be transferrable to other parts of the world that face the similar problems due to the CHABs in their freshwater environments. This paper provides a basic introduction to CHABs and their toxins as well as an overview of public health implications including exposure routes, health effects, and drinking water issues, algal bloom advisory practices in Ohio, toxin measurements results in Ohio public water supplies, and mitigation efforts.
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Citations
Citations to this article as recorded by- Current Capabilities and Challenges of Remote Sensing in Monitoring Freshwater Cyanobacterial Blooms: A Scoping Review
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G.K. Pindihama, W.M. Gitari, S. Mukangaya
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Amy E. Grogan, Catharina Alves-de-Souza, Lawrence B. Cahoon, Michael A. Mallin
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Toxicon.2023; 234: 107282. CrossRef - Cyanotoxins in groundwater; occurrence, potential sources, health impacts and knowledge gap for public health
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Toxicon.2023; 226: 107077. CrossRef - Patterns and impacts of cyanobacteria in a deep, thermally stratified, oligotrophic lake
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AWWA Water Science.2023;[Epub] CrossRef - Beneath the surface: spatial and temporal trends in water quality and its impacts on algal community composition in the Albemarle Sound, North Carolina
Emma T. Brentjens, Anika R. Bratt
Aquatic Ecology.2023; 57(2): 243. CrossRef - Toxicity effects of disinfection byproduct chloroacetic acid to Microcystis aeruginosa: Cytotoxicity and mechanisms
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Journal of Environmental Sciences.2023; 129: 229. CrossRef - Facilitating the determination of microcystin toxins with bio-inspired sensors
Bingzhi Li, Qiusu Wang, Muhammad Sohail, Xing Zhang, Huan He, Lei Lin
Microchemical Journal.2023; 189: 108482. CrossRef - Host microbiome associated low intestinal acetate correlates with progressive NLRP3-dependent hepatic-immunotoxicity in early life microcystin-LR exposure
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Toxins.2023; 15(12): 684. CrossRef - Scenario-based land use modeling for nutrient management in the Skaneateles Lake Watershed
Robert A. Rioux, Aaron L. Strong
Environmental Challenges.2023; 12: 100739. CrossRef - Beyond cyanotoxins: increased Legionella, antibiotic resistance genes in western Lake Erie water and disinfection-byproducts in their finished water
Jiyoung Lee, Seungjun Lee, Chenlin Hu, Jason W. Marion
Frontiers in Microbiology.2023;[Epub] CrossRef - Harmful and beneficial properties of cyanotoxins: Two sides of the same coin
Annarita Ricciardelli, Antonino Pollio, Maria Costantini, Valerio Zupo
Biotechnology Advances.2023; 68: 108235. CrossRef - Cyanobacterial biomass prediction in a shallow lake using the time series SARIMAX models
Yan Guo, Xijun Lai, Min Gan
Ecological Informatics.2023; 78: 102292. CrossRef - Field application of biologically derived substances (BDSs: Naphthoquinone derivative) for eco-friendly mitigation of harmful cyanobacterial blooms
Jae-Hyoung Joo, Yoon-Ho Kang, Zhun Li, Sae-Hee Kim, Bum Soo Park, Myung-Soo Han
Journal of Applied Phycology.2023; 35(5): 2271. CrossRef - Freshwater Mussels, Ecosystem Services, and Clean Water Regulation in Minnesota: Formulating an Effective Conservation Strategy
Baishali Bakshi, R. William Bouchard, Robert Dietz, Daniel Hornbach, Philip Monson, Bernard Sietman, Dennis Wasley
Water.2023; 15(14): 2560. CrossRef - Evaluation of planktonic cyanobacteria in Peruvian freshwater lentic water bodies: prevalence and regulatory framework to aid policy making
Anthony Salazar-Torres, Danny Robles, Alonso Reyes, Mónica C. Santa-Maria, Patrick Venail
Environmental Monitoring and Assessment.2023;[Epub] CrossRef - Examination of Microcystin Adsorption by the Type of Plastic Materials Used during the Procedure of Microcystin Analysis
Chan Seo, Joo Won Lee, Won-Kyo Jung, Yoon-Mi Lee, Seungjun Lee, Sang Gil Lee
Toxins.2022; 14(9): 625. CrossRef - Immobilization of Microbes for Biodegradation of Microcystins: A Mini Review
Jiajia Zhang, Jia Wei, Isaac Yaw Massey, Tangjian Peng, Fei Yang
Toxins.2022; 14(8): 573. CrossRef - Harmful algal bloom-related 311 calls, Cape Coral, Florida 2018–2019
Christopher K. Uejio, Elaina Gonsoroski, Samendra P. Sherchan, Leslie Beitsch, E. W. Harville, C. Blackmore, K. Pan, Maureen Y. Lichtveld
Journal of Water and Health.2022; 20(3): 531. CrossRef - The success of the bloom-forming cyanobacteria Planktothrix: Genotypes variability supports variable responses to light and temperature stress
Sandra Kim Tiam, Katia Comte, Caroline Dalle, Marine Delagrange, Chakib Djediat, Bertrand Ducos, Charlotte Duval, Kathleen Feilke, Sahima Hamlaoui, Séverine Le Manach, Pierre Setif, Claude Yéprémian, Benjamin Marie, Diana Kirilovsky, Muriel Gugger, Cécile
Harmful Algae.2022; 117: 102285. CrossRef - High-resolution temporal detection of cyanobacterial blooms in a deep and oligotrophic lake by high-frequency buoy data
Manxue Zhang, Yunlin Zhang, Jianming Deng, Miao Liu, Yongqiang Zhou, Yibo Zhang, Kun Shi, Cuiling Jiang
Environmental Research.2022; 203: 111848. CrossRef - Multiple roles of bamboo as a regulator of cyanobacterial bloom in aquatic systems
Aimin Hao, Mengyao Su, Sohei Kobayashi, Min Zhao, Yasushi Iseri
Scientific Reports.2022;[Epub] CrossRef - Relationship between freshwater harmful algal blooms and neurodegenerative disease incidence rates in South Korea
Seungjun Lee, Boseung Choi, Sung Jae Kim, Jinnam Kim, Dayun Kang, Jiyoung Lee
Environmental Health.2022;[Epub] CrossRef - Occurrence of cyanobacteria in water used for food production: A review
Mulalo Mutoti, Jabulani Gumbo, Afam Israel Obiefuna Jideani
Physics and Chemistry of the Earth, Parts A/B/C.2022; 125: 103101. CrossRef - Detection and Occurrence of Microcystins and Nodularins in Lake Manatee and Lake Washington-Two Floridian Drinking Water Systems
Rajesh Melaram, Brandon Lopez-Dueñas
Frontiers in Water.2022;[Epub] CrossRef - Evaluation of the Role of Probiotics As a New Strategy to Eliminate Microbial Toxins: a Review
Abdolamir Ghadaksaz, Somayeh Mousavi Nodoushan, Hamid Sedighian, Elham Behzadi, Abbas Ali Imani Fooladi
Probiotics and Antimicrobial Proteins.2022; 14(2): 224. CrossRef - Octocrylene: From Sunscreens to the Degradation Pathway during Chlorination Processes: Formation of Byproducts and Their Ecotoxicity Assessment
Antonio Medici, Lorenzo Saviano, Antonietta Siciliano, Giovanni Libralato, Marco Guida, Lucio Previtera, Giovanni Di Fabio, Armando Zarrelli
Molecules.2022; 27(16): 5286. CrossRef - Health impact assessment of air pollution in an area of the largest coal mine in Brazil
Laiz Coutelle Honscha, Julia Oliveira Penteado, Valério de Sá Gama, Alícia da Silva Bonifácio, Priscila Aikawa, Marina dos Santos, Paulo Roberto Martins Baisch, Ana Luíza Muccillo-Baisch, Flavio Manoel Rodrigues da Silva Júnior
Environmental Science and Pollution Research.2022; 29(10): 14176. CrossRef - Comparative genomic analysis of five freshwater cyanophages and reference-guided metagenomic data mining
Kang Du, Feng Yang, Jun-Tao Zhang, Rong-Cheng Yu, Ziqing Deng, Wei-Fang Li, Yuxing Chen, Qiong Li, Cong-Zhao Zhou
Microbiome.2022;[Epub] CrossRef - Prediction of Microcystis Occurrences and Analysis Using Machine Learning in High-Dimension, Low-Sample-Size and Imbalanced Water Quality Data
Masaya Mori, Roberto Gonzalez Flores, Yoshihiro Suzuki, Kei Nukazawa, Toru Hiraoka, Hirofumi Nonaka
Harmful Algae.2022; 117: 102273. CrossRef - Near‐term phytoplankton forecasts reveal the effects of model time step and forecast horizon on predictability
Whitney M. Woelmer, R. Quinn Thomas, Mary E. Lofton, Ryan P. McClure, Heather L. Wander, Cayelan C. Carey
Ecological Applications.2022;[Epub] CrossRef - Identifying the influence of zebra and quagga mussels on sedimentary phosphorus dynamics in western Lake Erie
Fasong Yuan, Robert A. Krebs, Amanda N. Wagner
Hydrobiologia.2021; 848(8): 1897. CrossRef - Effects of harmful algal blooms on regulated disinfection byproducts: Findings from five utility case studies
Katherine Foreman, Deborah Vacs Renwick, Morgan McCabe, Adam Cadwallader, Hannah Holsinger, Charlene Kormondy, Ryan Albert
AWWA Water Science.2021;[Epub] CrossRef - Rapid detection and quantification of microcystins in surface water by an impedimetric immunosensor
Abraham O. Ogungbile, Idan Ashur, Itzik Icin, Orr H. Shapiro, Sefi Vernick
Sensors and Actuators B: Chemical.2021; 348: 130687. CrossRef - Florida’s Harmful Algal Bloom (HAB) Problem: Escalating Risks to Human, Environmental and Economic Health With Climate Change
Cynthia Ann Heil, Amanda Lorraine Muni-Morgan
Frontiers in Ecology and Evolution.2021;[Epub] CrossRef - Killing effect of deinoxanthins on cyanobloom-forming Microcystis aeruginosa: Eco-friendly production and specific activity of deinoxanthins
Wonjae Kim, Minkyung Kim, Minyoung Hong, Woojun Park
Environmental Research.2021; 200: 111455. CrossRef - Design and Preliminary Testing of an In-Field Passive Treatment System for Removing Phosphorus from Surface Water
George Carleton, Jessica Glowczewski, Teresa Cutright
Applied Sciences.2021; 11(9): 3743. CrossRef - A machine learning approach for early warning of cyanobacterial bloom outbreaks in a freshwater reservoir
Yongeun Park, Han Kyu Lee, Jae-Ki Shin, Kangmin Chon, SungHwan Kim, Kyung Hwa Cho, Jin Hwi Kim, Sang-Soo Baek
Journal of Environmental Management.2021; 288: 112415. CrossRef - Harmful Cyanobacterial Blooms (HCBs): innovative green bioremediation process based on anti-cyanobacteria bioactive natural products
Soukaina El Amrani Zerrifi, Richard Mugani, El Mahdi Redouane, Fatima El Khalloufi, Alexandre Campos, Vitor Vasconcelos, Brahim Oudra
Archives of Microbiology.2021; 203(1): 31. CrossRef - Uncovering Research Trends of Phycobiliproteins Using Bibliometric Approach
Hui Teng Tan, Fatimah Md. Yusoff, Yam Sim Khaw, Siti Aqlima Ahmad, Noor Azmi Shaharuddin
Plants.2021; 10(11): 2358. CrossRef - Controlling Eutrophication via Surface Aerators in Irregular-Shaped Urban Ponds
Aimin Hao, Sohei Kobayashi, Dong Xia, Qi Mi, Ning Yan, Mengyao Su, Aishou Lin, Min Zhao, Yasushi Iseri
Water.2021; 13(23): 3360. CrossRef - Acute health effects associated with satellite-determined cyanobacterial blooms in a drinking water source in Massachusetts
Jianyong Wu, Elizabeth D. Hilborn, Blake A. Schaeffer, Erin Urquhart, Megan M. Coffer, Cynthia J. Lin, Andrey I. Egorov
Environmental Health.2021;[Epub] CrossRef - Acclimation of an algal consortium to sequester nutrients from anaerobic digestate
Qichen Wang, Jessa Cherones, Brendan Higgins
Bioresource Technology.2021; 342: 125921. CrossRef - Complete sequence and structure of the genome of the harmful algal bloom-forming cyanobacterium Planktothrix agardhii NIES-204T and detailed analysis of secondary metabolite gene clusters
Yohei Shimura, Takatomo Fujisawa, Yuu Hirose, Naomi Misawa, Yu Kanesaki, Yasukazu Nakamura, Masanobu Kawachi
Harmful Algae.2021; 101: 101942. CrossRef - Inhibition of endoplasmic reticulum stress-related autophagy attenuates MCLR-induced apoptosis in zebrafish testis and mouse TM4 cells
Zaiwei Wu, Fang Wang, Liwen Hu, Jianrong Zhang, Daojun Chen, Sujuan Zhao
Ecotoxicology and Environmental Safety.2021; 221: 112438. CrossRef - Expanding ecological assessment by integrating microorganisms into routine freshwater biomonitoring
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Water Research.2021; 191: 116767. CrossRef - Recent trends in the detection of freshwater cyanotoxins with a critical note on their occurrence in Asia
Prabir Kumar Kulabhusan, Katrina Campbell
Trends in Environmental Analytical Chemistry.2021; 32: e00150. CrossRef - Acute cyanotoxin poisoning reveals a marginal effect on mouse gut microbiome composition but indicates metabolic shifts related to liver and gut inflammation
Molly C. Mills, Morgan V. Evans, Seungjun Lee, Thomas Knobloch, Christopher Weghorst, Jiyoung Lee
Ecotoxicology and Environmental Safety.2021; 215: 112126. CrossRef - Quantifying Scales of Spatial Variability of Cyanobacteria in a Large, Eutrophic Lake Using Multiplatform Remote Sensing Tools
Samantha L. Sharp, Alexander L. Forrest, Keith Bouma-Gregson, Yufang Jin, Alicia Cortés, S. Geoffrey Schladow
Frontiers in Environmental Science.2021;[Epub] CrossRef - Climate Change and Emerging Food Safety Issues: A Review
Ramona A. Duchenne-Moutien, Hudaa Neetoo
Journal of Food Protection.2021; 84(11): 1884. CrossRef - Assessing Impacts of Changes in External Nutrient Loadings on a Temperate Chinese Drinking Water Reservoir
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Frontiers in Environmental Science.2021;[Epub] CrossRef - Diatomite-enhanced coagulation for algal removal in polluted raw water: performance optimization and pilot-scale study
Chao Jiang, Wei Ding, Weitang Zhu, Liang Zhu, Xiangyang Xu
Environmental Science and Pollution Research.2021; 28(36): 50204. CrossRef - The Application of Potassium Permanganate to Treat Cyanobacteria-Laden Water: a Review
Kayla Piezer, Lei Li, Youchul Jeon, Anusha Kadudula, Youngwoo Seo
Process Safety and Environmental Protection.2021; 148: 400. CrossRef - LC and NMR Studies for Identification and Characterization of Degradation Byproducts of Olmesartan Acid, Elucidation of Their Degradation Pathway and Ecotoxicity Assessment
Giovanni Luongo, Antonietta Siciliano, Giovanni Libralato, Sara Serafini, Lorenzo Saviano, Lucio Previtera, Giovanni Di Fabio, Armando Zarrelli
Molecules.2021; 26(6): 1769. CrossRef - Quantifying the Human Health Benefits of Using Satellite Information to Detect Cyanobacterial Harmful Algal Blooms and Manage Recreational Advisories in U.S. Lakes
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GeoHealth.2020;[Epub] CrossRef - Synthesis of new tetronamides displaying inhibitory activity against bloom‐forming cyanobacteria
Jaime AM Acosta, Milandip Karak, Luiz CA Barbosa, John Boukouvalas, Andrea Straforini, Giuseppe Forlani
Pest Management Science.2020; 76(2): 779. CrossRef - Analysis of Covalently Bound Microcystins in Sediments and Clam Tissue in the Sacramento–San Joaquin River Delta, California, USA
Melissa Bolotaolo, Tomofumi Kurobe, Birgit Puschner, Bruce G Hammock, Matt J. Hengel, Sarah Lesmeister, Swee J. Teh
Toxins.2020; 12(3): 178. CrossRef - Concise Synthesis of (+)‐[13C4]‐Anatoxin‐a by Dynamic Kinetic Resolution of a Cyclic Iminium Ion
Jacob J. Lacharity, Artur K. Mailyan, Karen Y. Chen, Armen Zakarian
Angewandte Chemie.2020; 132(28): 11460. CrossRef - Enhanced resistance of co-existing toxigenic and non-toxigenic Microcystis aeruginosa to pyrogallol compared with monostrains
Yunni Gao, Jing Lu, Philip T. Orr, Ann Chuang, Hannah M. Franklin, Michele A. Burford
Toxicon.2020; 176: 47. CrossRef - Drinking water treatment residuals from cyanobacteria bloom-affected areas: Investigation of potential impact on agricultural land application
Yuehan Ai, Seungjun Lee, Jiyoung Lee
Science of The Total Environment.2020; 706: 135756. CrossRef - Relationship between cyanobacterial bloom impacted drinking water sources and hepatocellular carcinoma incidence rates
Tyler Gorham, Elisabeth Dowling Root, Yuanyuan Jia, C.K. Shum, Jiyoung Lee
Harmful Algae.2020; 95: 101801. CrossRef - Microcystis Bloom in an Urban Lake after River Water Diversion—A Case Study
Xiaoyan Chen, Dong Bai, Chunlei Song, Yiyong Zhou, Xiuyun Cao
Water.2020; 12(6): 1811. CrossRef - Cyanobacterial blooms modify food web structure and interactions in western Lake Erie
Ruth D. Briland, Joshua P. Stone, Manjunath Manubolu, Jiyoung Lee, Stuart A. Ludsin
Harmful Algae.2020; 92: 101586. CrossRef - Evaluation of alum-based water treatment residuals used to adsorb reactive phosphorus
George Carleton, Teresa J. Cutright
Water Science and Engineering.2020; 13(3): 181. CrossRef - Exposure to microcystin among coastal residents during a cyanobacteria bloom in Florida
Adam M. Schaefer, Luke Yrastorza, Nicole Stockley, Kathi Harvey, Nancy Harris, Robert Grady, James Sullivan, Malcolm McFarland, John S. Reif
Harmful Algae.2020; 92: 101769. CrossRef - Suppression of water-bloom cyanobacterium Microcystis aeruginosa by algaecide hydrogen peroxide maximized through programmed cell death
Tingru Zhou, Huansheng Cao, Jie Zheng, Fei Teng, Xuejian Wang, Kai Lou, Xihui Zhang, Yi Tao
Journal of Hazardous Materials.2020; 393: 122394. CrossRef - Identifying the Influence of Land Cover and Human Population on Chlorophyll a Concentrations Using a Pseudo-Watershed Analytical Framework
Luke Moslenko, Kevin Blagrave, Alessandro Filazzola, Arnab Shuvo, Sapna Sharma
Water.2020; 12(11): 3215. CrossRef - Impact of Hydrogen Peroxide and Copper Sulfate on the Delayed Release of Microcystin
Arash Zamyadi, Katherine E. Greenstein, Caitlin M. Glover, Craig Adams, Erik Rosenfeldt, Eric C. Wert
Water.2020; 12(4): 1105. CrossRef - Concise Synthesis of (+)‐[13C4]‐Anatoxin‐a by Dynamic Kinetic Resolution of a Cyclic Iminium Ion
Jacob J. Lacharity, Artur K. Mailyan, Karen Y. Chen, Armen Zakarian
Angewandte Chemie International Edition.2020; 59(28): 11364. CrossRef - Harnessing the biocatalytic potential of iron- and α-ketoglutarate-dependent dioxygenases in natural product total synthesis
Christian R. Zwick, Hans Renata
Natural Product Reports.2020; 37(8): 1065. CrossRef - Environmental factors controlling phytoplankton dynamics in a large floodplain river with emphasis on cyanobacteria
Shawn M. Giblin, Gretchen A. Gerrish
River Research and Applications.2020; 36(7): 1137. CrossRef - Identification and enumeration of cyanobacteria species using a deep neural network
Sang-Soo Baek, JongCheol Pyo, Yakov Pachepsky, Yongeun Park, Mayzonee Ligaray, Chi-Yong Ahn, Young-Hyo Kim, Jong Ahn Chun, Kyung Hwa Cho
Ecological Indicators.2020; 115: 106395. CrossRef - Monitoring cyanobacteria occurrence in freshwater reservoirs using semi-analytical algorithms and orbital remote sensing
Henrique Dantas Borges, Rejane Ennes Cicerelli, Tati de Almeida, Henrique L. Roig, Diogo Olivetti
Marine and Freshwater Research.2020; 71(5): 569. CrossRef - Microcystis toxin-mediated tumor promotion and toxicity lead to shifts in mouse gut microbiome
Jiyoung Lee, Seungjun Lee, Alba Mayta, Igor Mrdjen, Christopher Weghorst, Thomas Knobloch
Ecotoxicology and Environmental Safety.2020; 206: 111204. CrossRef - Effect of Zinc on Microcystis aeruginosa UTEX LB 2385 and Its Toxin Production
Jose L. Perez, Tinchun Chu
Toxins.2020; 12(2): 92. CrossRef - Ecogenomics of the Marine Benthic Filamentous Cyanobacterium Adonisia
Juline M. Walter, Felipe H. Coutinho, Luciana Leomil, Paulo I. Hargreaves, Mariana E. Campeão, Verônica V. Vieira, Beatriz S. Silva, Giovana O. Fistarol, Paulo S. Salomon, Tomoo Sawabe, Sayaka Mino, Masashi Hosokawa, Hideaki Miyashita, Fumito Maruyama, Ma
Microbial Ecology.2020; 80(2): 249. CrossRef - Analysis of multiclass cyanotoxins (microcystins, anabaenopeptins, cylindrospermopsin and anatoxins) in lake waters using on-line SPE liquid chromatography high-resolution Orbitrap mass spectrometry
Audrey Roy-Lachapelle, Sung Vo Duy, Gabriel Munoz, Quoc Tuc Dinh, Emmanuelle Bahl, Dana F. Simon, Sébastien Sauvé
Analytical Methods.2019; 11(41): 5289. CrossRef - Design, synthesis and algicides activities of thiourea derivatives as the novel scaffold aldolase inhibitors
Shan Xiao, Lin Wei, Zongqin Hong, Li Rao, Yanliang Ren, Jian Wan, Lingling Feng
Bioorganic & Medicinal Chemistry.2019; 27(5): 805. CrossRef - Freshwater Supply to Metropolitan Shanghai: Issues of Quality from Source to Consumers
Maotian Li, Jing Chen, Brian Finlayson, Zhongyuan Chen, Michael Webber, Jon Barnett, Mark Wang
Water.2019; 11(10): 2176. CrossRef - Harmful algal blooms and liver diseases: focusing on the areas near the four major rivers in South Korea
Seungjun Lee, Jinnam Kim, Boseung Choi, Gijung Kim, Jiyoung Lee
Journal of Environmental Science and Health, Part C.2019; 37(4): 356. CrossRef - Characterization of Cyanophages in Lake Erie: Interaction Mechanisms and Structural Damage of Toxic Cyanobacteria
Xuewen Jiang, Chanhee Ha, Seungjun Lee, Jinha Kwon, Hanna Cho, Tyler Gorham, Jiyoung Lee
Toxins.2019; 11(8): 444. CrossRef - Nutrients, eutrophication and harmful algal blooms along the freshwater to marine continuum
Wayne A. Wurtsbaugh, Hans W. Paerl, Walter K. Dodds
WIREs Water.2019;[Epub] CrossRef - N-Halamine Derivatized Nanoparticles with Selective Cyanocidal Activity: Potential for Targeted Elimination of Harmful Cyanobacterial Blooms
Giji Sadhasivam, Chen Gelber, Varda Zakin, Shlomo Margel, Orr H. Shapiro
Environmental Science & Technology.2019; 53(15): 9160. CrossRef - Dynamics of cyanobacteria blooms are linked to the hydrology of shallow Florida lakes and provide insight into possible impacts of climate change
Karl E. Havens, Gaohua Ji, John R. Beaver, Rolland S. Fulton, Catherine E. Teacher
Hydrobiologia.2019; 829(1): 43. CrossRef - Microcystin-LR in peripheral circulation worsens the prognosis partly through oxidative stress in patients with hepatocellular carcinoma
Feifei Lei, Xu Lei, Rugui Li, Huabing Tan
Clinical and Experimental Medicine.2019; 19(2): 235. CrossRef - Economic impact of harmful algal blooms on human health: a systematic review
Christian R. C. Kouakou, Thomas G. Poder
Journal of Water and Health.2019; 17(4): 499. CrossRef - Influence of land use on trophic state indexes in northeast Brazilian river basins
Olandia Ferreira Lopes, Felizardo Adenilson Rocha, Lucas Farias de Sousa, Daniela Mariano Lopes da Silva, Andrique Figueiredo Amorim, Ronaldo Lima Gomes, André Luiz Sampaio da Silva Junior, Raildo Mota de Jesus
Environmental Monitoring and Assessment.2019;[Epub] CrossRef - Harmful algal bloom and associated health risks among users of Lake Victoria freshwater: Ukerewe Island, Tanzania
Geofrey J. Mchau, Edna Makule, Revocatus Machunda, Yun Yun Gong, Martin Kimanya
Journal of Water and Health.2019; 17(5): 826. CrossRef - Oriented Functionalization of Magnetic Beads with in Vivo Biotinylated Nanobodies for Rapid MALDI-TOF MS Ultrasensitive Quantitation of Microcystins in Biological Samples
Macarena Pírez-Schirmer, Beatriz M. Brena, Gualberto González-Sapienza
Analytical Chemistry.2019; 91(15): 9925. CrossRef - Alternate succession of aggregate-forming cyanobacterial genera correlated with their attached bacteria by co-pathways
Cong-Min Zhu, Jun-Yi Zhang, Rui Guan, Lauren Hale, Ning Chen, Ming Li, Zu-Hong Lu, Qin-Yu Ge, Yun-Feng Yang, Ji-Zhong Zhou, Ting Chen
Science of The Total Environment.2019; 688: 867. CrossRef - Identifying mechanisms of environmental decision-making: How ideology and geographic proximity influence public support for managing agricultural runoff to curb harmful algal blooms
Tian Guo, Erik C. Nisbet, Jay F. Martin
Journal of Environmental Management.2019; 241: 264. CrossRef - What determines the public’s support for water quality regulations to mitigate agricultural runoff?
Tian Guo, Devin Gill, Thomas H. Johengen, Bradley L. Cardinale
Environmental Science & Policy.2019; 101: 323. CrossRef - Relating Urban Biodiversity to Human Health With the ‘Holobiont’ Concept
Jacob G. Mills, Justin D. Brookes, Nicholas J. C. Gellie, Craig Liddicoat, Andrew J. Lowe, Harrison R. Sydnor, Torsten Thomas, Philip Weinstein, Laura S. Weyrich, Martin F. Breed
Frontiers in Microbiology.2019;[Epub] CrossRef - Biochemical and morphological biomarkers of the liver damage in the Neotropical fish, Piaractus mesopotamicus, injected with crude extract of cyanobacterium Radiocystis fernandoi
Driele Tavares, Marcelo Gustavo Paulino, Ana Paula Terezan, João Batista Fernandes, Alessandra Giani, Marisa Narciso Fernandes
Environmental Science and Pollution Research.2018; 25(16): 15349. CrossRef - Algal Blooms and Cyanotoxins in Jordan Lake, North Carolina
Daniel Wiltsie, Astrid Schnetzer, Jason Green, Mark Vander Borgh, Elizabeth Fensin
Toxins.2018; 10(2): 92. CrossRef - Heterologous expression and characterization of a novel serine protease from Daphnia magna: A possible role in susceptibility to toxic cyanobacteria
Jacqueline Lange, Fatih Demir, Pitter F. Huesgen, Ulrich Baumann, Eric von Elert, Christian Pichlo
Aquatic Toxicology.2018; 205: 140. CrossRef - High-Spatial Resolution Monitoring of Phycocyanin and Chlorophyll-a Using Airborne Hyperspectral Imagery
Jong Cheol Pyo, Mayzonee Ligaray, Yong Sung Kwon, Myoung-Hwan Ahn, Kyunghyun Kim, Hyuk Lee, Taegu Kang, Seong Been Cho, Yongeun Park, Kyung Hwa Cho
Remote Sensing.2018; 10(8): 1180. CrossRef - Seasonal Changes in Cyanobacterial Diversity of a Temperate Freshwater Paldang Reservoir (Korea) Explored by using Pyrosequencing
Thangavelu Boopathi, Hui Wang, Man-Duck Lee, Jang-Seu Ki
Environmental Biology Research.2018; 36(3): 424. CrossRef - Magnetic activated carbon@ iron oxide@manganese oxide composite as an adsorbent for preconcentration of microcystin –LR in surface water, tap water, water and wastewater
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Environmental Nanotechnology, Monitoring & Management.2018; 10: 199. CrossRef - Further Understanding of Degradation Pathways of Microcystin-LR by an Indigenous Sphingopyxis sp. in Environmentally Relevant Pollution Concentrations
Qin Ding, Kaiyan Liu, Kai Xu, Rongli Sun, Juan Zhang, Lihong Yin, Yuepu Pu
Toxins.2018; 10(12): 536. CrossRef - Solar Photocatalysis Using Fixed-Film TiO2 for Microcystins from Colonial Microcystis aeruginosa
Ciera M. Kinley, Maas Hendrikse, Alyssa J. Calomeni, Tyler D. Geer, John H. Rodgers
Water, Air, & Soil Pollution.2018;[Epub] CrossRef - Bloom-forming cyanobacteria and cyanotoxins in Argentina: A growing health and environmental concern
Anabella Aguilera, Signe Haakonsson, María Victoria Martin, Graciela L. Salerno, Ricardo O. Echenique
Limnologica.2018; 69: 103. CrossRef - Short Total Synthesis of [15N5]-Cylindrospermopsins from 15NH4Cl Enables Precise Quantification of Freshwater Cyanobacterial Contamination
Artur K. Mailyan, Joanna L. Chen, Weiwei Li, Arturo A. Keller, Shawn M. Sternisha, Brian G. Miller, Armen Zakarian
Journal of the American Chemical Society.2018; 140(18): 6027. CrossRef - Restoration of Nature or Special Interests? A Political Economy Analysis of the Four Major Rivers Restoration Project in South Korea
Hyojong Song, Michael J. Lynch
Critical Criminology.2018; 26(2): 251. CrossRef - The Effect of Organic Carbon Addition on the Community Structure and Kinetics of Microcystin-Degrading Bacterial Consortia
Derek Manheim, Yuen-Ming Cheung, Sunny Jiang
Water.2018; 10(11): 1523. CrossRef - Fresh produce and their soils accumulate cyanotoxins from irrigation water: Implications for public health and food security
Seungjun Lee, Xuewen Jiang, Manjunath Manubolu, Ken Riedl, Stuart A. Ludsin, Jay F. Martin, Jiyoung Lee
Food Research International.2017; 102: 234. CrossRef - Chlorophyll-A Prediction of Lakes with Different Water Quality Patterns in China Based on Hybrid Neural Networks
Xue Li, Jian Sha, Zhong-Liang Wang
Water.2017; 9(7): 524. CrossRef - Is the future of large shallow lakes blue-green? Comparing the response of a catchment-lake model chain to climate predictions
Fabien Cremona, Sirje Vilbaste, Raoul-Marie Couture, Peeter Nõges, Tiina Nõges
Climatic Change.2017; 141(2): 347. CrossRef - Disturbance‐mediated Cyanobacterial Harmful Algal Bloom (CHAB) formation in a small Ohio reservoir
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Journal Articles
- Flavobacterium cheonhonense sp. nov., Isolated from a Freshwater Reservoir
- Siwon Lee , Jung-Hwan Oh , Hang-Yeon Weon , Tae-Young Ahn
- J. Microbiol. 2012;50(4):562-566. Published online July 21, 2012
- DOI: https://doi.org/10.1007/s12275-012-1229-z
- 223 View
- 0 Download
- 13 Crossref
-
Abstract
PDF
- A novel bacterium, designated strain ARSA-15T, was isolated from a freshwater sample collected from the Cheonho reservoir, Cheonan, Republic of Korea. The isolate was deepyellow pigment, Gram-negative, rod-shaped, non-motile, and catalase- and oxidase-positive. Phylogenetic analysis based on 16S rRNA gene sequences showed that the isolate belongs to the genus Flavobacterium, and shared less than 97% sequence similarity with recognized Flavobacterium species. The novel species was able to grow at 10–37°C, pH 6.5–10.0, and in 0–0.5% (w/v) NaCl concentrations. Chemotaxonomically, iso-C15:1, iso-C15:0, and iso-C16:0 were observed to be the predominant cellular fatty acid, and menaquinone-6 (MK-6) was the predominant respiratory quinone. The major polar lipid patterns of strain ARSA-19T was phosphatidylethanolamine, unknown aminolipid (AL1 and AL2), and unidentified polar lipids (L1, L2, and L3). The genomic DNA G+C content of the isolate was 39.2 mol%. On the basis of polyphasic approach, strain ARSA-15T represents a novel species of the genus Flavobacterium, for which the name Flavobacterium cheonhonense sp. nov. is proposed. The type strain is ARSA-15T (=KACC 14967T =KCTC 23180T =JCM 17064T).
-
Citations
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Flavobacterium mekongense sp. nov., isolated from the Mekong River in Thailand
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International Journal of Systematic and Evolutionary Microbiology .2025;[Epub] CrossRef - Description of Flavobacterium fructosi sp. nov., Flavobacterium xylosi sp. nov. and Flavobacterium zhouii sp. nov., three new members of the genus Flavobacterium
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International Journal of Systematic and Evolutionary Microbiology .2025;[Epub] CrossRef -
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-
Flavobacterium mekongense sp. nov., isolated from the Mekong River in Thailand
- NOTE] Arenimonas aquaticum sp. nov., a Member of the Gammaproteobacterium, Isolated from a Freshwater Reservoir
- A-Ram Kim , Siwon Lee , Kyudong Han , Tae-Young Ahn
- J. Microbiol. 2012;50(2):354-358. Published online April 27, 2012
- DOI: https://doi.org/10.1007/s12275-012-1301-8
- 142 View
- 0 Download
- 6 Scopus
-
Abstract
PDF
- A novel bacterial strain, designated NA-09T, was isolated from a freshwater sample collected from the Cheonho reservoir, Republic of Korea. Colonies were creamy-white pigmented, translucent, and circular with convex shape. The isolate was Gram-staining negative, strictly aerobic, motile, and rod-shaped. The 16S rRNA gene sequence analysis revealed that strain NA-09T belonged to the genus Arenimonas and showed the highest sequence similarities with Arenimonas malthae CC-JY-1T (95.4%), A. oryziterrae YC6267T (94.9%), A. composti P2-12-1T (94.8%), and A. donghaensis H03-R19T (94.1%). The major fatty acids were iso-C16:0 (20.8%), iso-C15:0 (16.9%), summed feature 1 (13.2%), and iso-C16:1ω7c alcohol (10.2%). The major isoprenoid quinone of the isolate was ubiquionone-8. On the basis of the data from the polyphasic characterization, the strain NA-09T represents a novel species, for which the name Arenimonas aquaticum sp. nov. is proposed (type strain NA-09T =KACC 14663T =NBRC 106550T).
Research Support, Non-U.S. Gov'ts
- Host Species as a Strong Determinant of the Intestinal Microbiota of Fish Larvae
- Xuemei Li , Yuhe Yu , Weisong Feng , Qingyun Yan , Yingchun Gong
- J. Microbiol. 2012;50(1):29-37. Published online February 27, 2012
- DOI: https://doi.org/10.1007/s12275-012-1340-1
- 294 View
- 0 Download
- 103 Crossref
-
Abstract
PDF
-
We investigated the influence of host species on intestinal
microbiota by comparing the gut bacterial community structure
of four cohabitating freshwater fish larvae, silver carp,
grass carp, bighead carp, and blunt snout bream, using denaturing
gradient gel electrophoresis (DGGE) of the amplified
16S and 18S rRNA genes. Similarity clustering indicated
that the intestinal microbiota derived from these four fish
species could be divided into four groups based on 16S
rRNA gene similarity, whereas the eukaryotic 18S rRNA
genes showed no distinct groups. The water sample from the
shared environment contained microbiota of an independent
group as indicated by both 16S and 18S rRNA genes segments.
The bacterial community structures were visualized using
rank-abundance plots fitted with linear regression models.
Results
showed that the intestinal bacterial evenness was significantly different between species (P<0.05) and between species and the water sample (P<0.01). Thirty-five relatively dominant bands in DGGE patterns were sequenced and grouped into five major taxa: Proteobacteria (26), Actinobacteria (5), Bacteroidetes (1), Firmicutes (2), and Cyanobacterial (1). Six eukaryotes were detected by sequencing 18S rRNA genes segments. The present study suggests that the intestines of the four fish larvae, although reared in the same environment, contained distinct bacterial populations, while intestinal eukaryotic microorganisms were almost identical. -
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- Stratified Distribution of Nutrients and Extremophile Biota within Freshwater Ice Covering the Surface of Lake Baikal
- Nina A. Bondarenko , Olga I. Belykh , Ludmila P. Golobokova , Olga V. Artemyeva , Natalia F. Logacheva , Irina V. Tikhonova , Irina A. Lipko , Tatyana Ya. Kostornova , Valentina V. Parfenova , Tamara V. Khodzher , Young-Gun Zo
- J. Microbiol. 2012;50(1):8-16. Published online February 27, 2012
- DOI: https://doi.org/10.1007/s12275-012-1251-1
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Abstract
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- Biological entities and gradients of selected chemicals within the seemingly barren ice layers covering Lake Baikal were investigated. Ice cores 40–68 cm long were obtained from inshore and offshore sites of Southern Lake Baikal during the cold period of a year (March-April) in 2007 and 2008. In microscopic observations of the melted ice, both algae and bacteria were found in considerable numbers (>103 cells/L and >104 cells/ml, respectively). Among all organisms found, diatom was generally the most predominant taxon in the ice. Interestingly, both planktonic and benthic algae were present in considerable numbers (2–4×104 cells/L). Dominant phototrophic picoplankton were comprised of small green algae of various taxa and cyanobacteria of Synechococcus and Cyanobium. The bacterial community consisted mostly of short rod and cocci cells, either freeliving or aggregated. Large numbers of yeast-like cells and actinomycete mycelium were also observed. Concentrations of silica, phosphorus, and nitrate were low by an order of magnitude where biota was abundant. The profile of the ice could be interpreted as vertical stratification of nutrients and biomass due to biological activities. Therefore, the organisms in the ice were regarded to maintain high activity while thriving under freezing conditions. Based on the results, it was concluded that the freshwater ice covering the surface of Lake Baikal is considerably populated by extremophilic microorganisms that actively metabolize and form a detritus food chain in the unique large freshwater ecosystem of Lake Baikal.
- Flavobacterium koreense sp. nov., Flavobacterium chungnamense sp. nov., and Flavobacterium cheonanense sp. nov., Isolated from a Freshwater Reservoir
- Siwon Lee , Hang-Yeon Weon , Soo-Jin Kim , Tae-Young Ahn
- J. Microbiol. 2011;49(3):387-392. Published online June 30, 2011
- DOI: https://doi.org/10.1007/s12275-011-0382-0
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- 16 Crossref
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Abstract
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- Taxonomic studies were performed on three strains isolated from Cheonho reservoir in Cheonan, Korea. The isolates were Gram-negative, aerobic, rod-shaped, non-motile, catalase-positive, and oxidase-positive. Colonies on solid media were cream-yellow, smooth, shiny, and circular. Phylogenetic analysis of the 16S rRNA gene sequences revealed that these strains belong to the genus Flavobacterium. The strains shared 98.6-99.4% sequence similarity with each other and showed less than 97% similarity with members of the genus Flavobacterium with validly published names. The DNA-DNA hybridization results confirmed the separate genomic status of strains ARSA-42T, ARSA-103T, and ARSA-108T. The isolates contained menaquinone-6 as the predominant menaquinone and iso-C15:0, iso-C15:0 3-OH, iso-C15:1 G, and iso-C16:0 3-OH as the major fatty acids. The genomic DNA G+C content of the isolates were 31.4-33.2 mol%. According to the phenotypic and genotypic data, these organisms are classified as representative of three novel species in the genus Flavobacterium, and the name Flavobacterium koreense sp. nov. (strain ARSA-42T =KCTC 23182T =JCM 17066T =KACC 14969T), Flavobacterium chungnamense sp. nov. (strain ARSA-103T =KCTC 23183T =JCM 17068T =KACC 14971T), and Flavobacterium cheonanense sp. nov. (strain ARSA-108T =KCTC 23184T =JCM 17069T =KACC 14972T) are proposed.
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Published Erratum
- Erratum to: Protective and Pathogenic Role of Humoral Responses in COVID‑19
- Uni Park , Nam-Hyuk Cho
- J. Microbiol. 2023;61(7):713-713.
- DOI: https://doi.org/10.1007/s12275-023-00058-0
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