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- Co-occurrence patterns between phytoplankton and bacterioplankton across the pelagic zone of Lake Baikal during spring
- Ivan S. Mikhailov , Yuri S. Bukin , Yulia R. Zakharova , Marina V. Usoltseva , Yuri P. Galachyants , Maria V. Sakirko , Vadim V. Blinov , Yelena V. Likhoshway
- J. Microbiol. 2019;57(4):252-262. Published online March 30, 2019
- DOI: https://doi.org/10.1007/s12275-019-8531-y
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- 19 Web of Science
- 16 Crossref
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Abstract
- Phytoplankton and bacterioplankton play a key role in carbon cycling of aquatic ecosystems. In this study, we found that co-occurrence patterns between different types of phytoplankton, bacterioplankton, and environmental parameters in Lake Baikal during spring were different over the course of three consecutive years. The composition of phytoplankton and bacterial communities was investigated using microscopy and 16S rRNA gene pyrosequencing, respectively. Non-metric multidimensional scaling (NMDS) revealed a relationship between the structure of phytoplankton and bacterial communities and temperature, location, and sampling year. Associations of bacteria with diatoms, green microalgae, chrysophyte, and cryptophyte were identified using microscopy. Cluster analysis revealed similar correlation patterns between phytoplankton abundance, number of attached bacteria, ratio of bacteria per phytoplankton cell and environmental parameters. Positive and negative correlations between different species of phytoplankton, heterotrophic bacteria and environmental parameters may indicate mutualistic or competitive relationships between microorganisms and their preferences to the environment.
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Citations
Citations to this article as recorded by
- Genomic Insights into the Bactericidal and Fungicidal Potential of Bacillus mycoides b12.3 Isolated in the Soil of Olkhon Island in Lake Baikal, Russia
Maria N. Romanenko, Anton E. Shikov, Iuliia A. Savina, Fedor M. Shmatov, Anton A. Nizhnikov, Kirill S. Antonets
Microorganisms.2024; 12(12): 2450. CrossRef - Free-Living and Particle-Associated Microbial Communities of Lake Baikal Differ by Season and Nutrient Intake
Maria Bashenkhaeva, Yelena Yeletskaya, Irina Tomberg, Artyom Marchenkov, Lubov Titova, Yuri Galachyants
Diversity.2023; 15(4): 572. CrossRef - Revealing the Differences in Ulnaria acus and Fragilaria radians Distribution in Lake Baikal via Analysis of Existing Metabarcoding Data
Alexey Morozov, Yuri Galachyants, Artem Marchenkov, Yulia Zakharova, Darya Petrova
Diversity.2023; 15(2): 280. CrossRef - Testing the effect of the submerged macrophyte Ceratophyllum demersum (L.) on heterotrophic bacterioplankton densities under different levels of nitrogen and phosphorus concentrations in shallow lake mesocosms
Deshou Cun, Yanran Dai, Yaocheng Fan, Feihua Wang, Wei Liang
Journal of Freshwater Ecology.2022; 37(1): 313. CrossRef - An investigation on phytoplankton composition and bacterial load relationship in a drinking water resource: Büyükçekmece Dam Lake (Istanbul, Türkiye)
Nese Yilmaz, Cumhur Haldun Yardimci, Remziye Eda Yardimci, Mohamed Elhag
Desalination and Water Treatment.2022; 273: 203. CrossRef - Monitoring harmful microalgal species and their appearance in Tokyo Bay, Japan, using metabarcoding
Sirje Sildever, Noriko Nishi, Nobuharu Inaba, Taiga Asakura, Jun Kikuchi, Yasuhito Asano, Takanori Kobayashi, Takashi Gojobori, Satoshi Nagai
Metabarcoding and Metagenomics.2022;[Epub] CrossRef - Vertically Exported Phytoplankton (< 20 µm) and Their Correlation Network With Bacterioplankton Along a Deep-Sea Seamount
Hanshuang Zhao, Zenghu Zhang, Shailesh Nair, Jiulong Zhao, Shanli Mou, Kuidong Xu, Yongyu Zhang
Frontiers in Marine Science.2022;[Epub] CrossRef - Environmental drivers of plankton protist communities along latitudinal and vertical gradients in the oldest and deepest freshwater lake
Gwendoline M. David, David Moreira, Guillaume Reboul, Nataliia V. Annenkova, Luis J. Galindo, Paola Bertolino, Ana I. López‐Archilla, Ludwig Jardillier, Purificación López‐García
Environmental Microbiology.2021; 23(3): 1436. CrossRef - Diversity of Aerobic Anoxygenic Phototrophs and Rhodopsin-Containing Bacteria in the Surface Microlayer, Water Column and Epilithic Biofilms of Lake Baikal
Agnia Dmitrievna Galachyants, Andrey Yurjevich Krasnopeev, Galina Vladimirovna Podlesnaya, Sergey Anatoljevich Potapov, Elena Viktorovna Sukhanova, Irina Vasiljevna Tikhonova, Ekaterina Andreevna Zimens, Marsel Rasimovich Kabilov, Natalia Albertovna Zhuch
Microorganisms.2021; 9(4): 842. CrossRef - Environmental influences shaping microbial communities in a low oxygen, highly stratified marine embayment
RRP Da Silva, CA White, JP Bowman, E Raes, A Bisset, C Chapman, L Bodrossy, DJ Ross
Aquatic Microbial Ecology.2021; 87: 185. CrossRef - Covariation patterns of phytoplankton and bacterioplankton in hypertrophic shallow lakes
M R Schiaffino, P Huber, M Sagua, C A Sabio y García, M Reissig
FEMS Microbiology Ecology.2020;[Epub] CrossRef - Comparative analysis of free-living and particle-associated bacterial communities of Lake Baikal during the ice-covered period
Maria V. Bashenkhaeva, Yuri P. Galachyants, Igor V. Khanaev, Maria V. Sakirko, Darya P. Petrova, Yelena V. Likhoshway, Yulia R. Zakharova
Journal of Great Lakes Research.2020; 46(3): 508. CrossRef - Interconnection of bacterial and phytoplanktonic communities with hydrochemical parameters from ice and under-ice water in coastal zone of Lake Baikal
Yu. S. Bukin, N. A. Bondarenko, I. I. Rusanov, N. V. Pimenov, S. V. Bukin, T. V. Pogodaeva, S. M. Chernitsyna, O. V. Shubenkova, V. G. Ivanov, A. S. Zakharenko, T. I. Zemskaya
Scientific Reports.2020;[Epub] CrossRef - Microorganisms of Lake Baikal—the deepest and most ancient lake on Earth
Tamara I. Zemskaya, Pedro J. Cabello-Yeves, Olga N. Pavlova, Francisco Rodriguez-Valera
Applied Microbiology and Biotechnology.2020; 104(14): 6079. CrossRef - Isolation and genome analysis of Winogradskyella algicola sp. nov., the dominant bacterial species associated with the green alga Dunaliella tertiolecta
Jaeho Song, Yeonjung Lim, Hye-Jin Jang, Yochan Joung, Ilnam Kang, Seong-Joo Hong, Choul-Gyun Lee, Jang-Cheon Cho
Journal of Microbiology.2019; 57(11): 982. CrossRef - Short-term succession of marine microbial fouling communities and the identification of primary and secondary colonizers
Raeid M. M. Abed, Dhikra Al Fahdi, Thirumahal Muthukrishnan
Biofouling.2019; 35(5): 526. CrossRef
- Genomic Insights into the Bactericidal and Fungicidal Potential of Bacillus mycoides b12.3 Isolated in the Soil of Olkhon Island in Lake Baikal, Russia
Research Support, Non-U.S. Gov'ts
- Diversity of Cyanobacterial Species and Phylotypes in Biofilms from the Littoral Zone of Lake Baikal
- Ekaterina G. Sorokovikova , Olga I. Belykh , Anna S. Gladkikh , Oleg V. Kotsar , Irina V. Tikhonova , Oleg A. Timoshkin , Valentina V. Parfenova
- J. Microbiol. 2013;51(6):757-765. Published online December 19, 2013
- DOI: https://doi.org/10.1007/s12275-013-3240-4
- 43 View
- 0 Download
- 12 Crossref
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Abstract
- The majority of naturally occurring biofilms contain numerous microorganisms that have not yet been cultured. Additionally, there is little information available regarding the genetic structure and species diversity of these communities. Therefore, we characterised the species diversity, structure and metagenome of biofilms grown on stones and steel plates in the littoral zone of Lake Baikal (East Siberia, Russia) by applying three different approaches. First, light microscopy enabled identification of the species diversity of biofilm-forming cyanobacteria on different substrates with the dominance of Rivularia rufescens, Tolypothrix limbata, Chamaesiphon fuscus, Сh. subglobosus, and Heteroleibleinia pusilla. Additionally, scanning electron microscopy was used to show the spatial structure of biofilms. Finally, sequence analysis of 30,660 16S rRNA clones indicated a high diversity within the biofilm communities, with the majority of the microbes being closely related to Cyanobacteria (8–46% sequences), Proteobacteria (14–43%), and Bacteroidetes (10– 41%). Rivularia sp., Pseudanabaena sp., and Chamaesiphon spp. were the dominant cyanobacterial phylotypes.
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Citations
Citations to this article as recorded by- Genomic Insights into the Bactericidal and Fungicidal Potential of Bacillus mycoides b12.3 Isolated in the Soil of Olkhon Island in Lake Baikal, Russia
Maria N. Romanenko, Anton E. Shikov, Iuliia A. Savina, Fedor M. Shmatov, Anton A. Nizhnikov, Kirill S. Antonets
Microorganisms.2024; 12(12): 2450. CrossRef - Time-series metagenomics reveals changing protistan ecology of a temperate dimictic lake
Arianna I. Krinos, Robert M. Bowers, Robin R. Rohwer, Katherine D. McMahon, Tanja Woyke, Frederik Schulz
Microbiome.2024;[Epub] CrossRef - Impact of meltwater flow intensity on the spatiotemporal heterogeneity of microbial mats in the McMurdo Dry Valleys, Antarctica
A Zoumplis, B Kolody, D Kaul, H Zheng, P Venepally, D M McKnight, C Takacs-Vesbach, A DeVries, A E Allen
ISME Communications.2023;[Epub] CrossRef - Water Quality, Toxicity and Diversity of Planktonic and Benthic Cyanobacteria in Pristine Ancient Lake Khubsugul (Hövsgöl), Mongolia
Olga I. Belykh, Ekaterina G. Sorokovikova, Irina V. Tomberg, Galina A. Fedorova, Anton V. Kuzmin, Andrey Yu. Krasnopeev, Maria Yu. Suslova, Sergey A. Potapov, Tatiana I. Belykh, Jadambaa Norovsuren, Agnia D. Galachyants, Irina V. Tikhonova
Toxins.2023; 15(3): 213. CrossRef - Diversity of Aerobic Anoxygenic Phototrophs and Rhodopsin-Containing Bacteria in the Surface Microlayer, Water Column and Epilithic Biofilms of Lake Baikal
Agnia Dmitrievna Galachyants, Andrey Yurjevich Krasnopeev, Galina Vladimirovna Podlesnaya, Sergey Anatoljevich Potapov, Elena Viktorovna Sukhanova, Irina Vasiljevna Tikhonova, Ekaterina Andreevna Zimens, Marsel Rasimovich Kabilov, Natalia Albertovna Zhuch
Microorganisms.2021; 9(4): 842. CrossRef - First data on cyanobacterial biodiversity in benthic biofilms during mass mortality of endemic sponges in Lake Baikal
Ekaterina Sorokovikova, Olga Belykh, Andrey Krasnopeev, Sergey Potapov, Irina Tikhonova, Igor Khanaev, Marsel Kabilov, Olga Baturina, Galina Podlesnaya, Oleg Timoshkin
Journal of Great Lakes Research.2020; 46(1): 75. CrossRef - Microbial bloom formation in a high pH spent nuclear fuel pond
Lynn Foster, Christopher Boothman, Sharon Ruiz-Lopez, Genevieve Boshoff, Peter Jenkinson, David Sigee, Jon K. Pittman, Katherine Morris, Jonathan R. Lloyd
Science of The Total Environment.2020; 720: 137515. CrossRef - Variation of sponge-inhabiting infauna with the state of health of the sponge Lubomirskia baikalensis (Pallas, 1776) in Lake Baikal
Yulia Zvereva, Olga Medvezhonkova, Tatyana Naumova, Natalia Sheveleva, Anton Lukhnev, Ekaterina Sorokovikova, Taisia Evstigneeva, Oleg Timoshkin
Limnology.2019; 20(3): 267. CrossRef - Diazotrophic cyanobacteria signatures and their relationship to hydrographic conditions in the Gulf of Gabes, Tunisia
Zaher Drira, Dorra Chaari, Asma Hamza, Malika Bel Hassen, Marc Pagano, Habib Ayadi
Journal of the Marine Biological Association of the United Kingdom.2017; 97(1): 69. CrossRef - Patterns of bacterial biodiversity in the glacial meltwater streams of the McMurdo Dry Valleys, Antarctica
David J. Van Horn, Caitlin R. Wolf, Daniel R. Colman, Xiaoben Jiang, Tyler J. Kohler, Diane M. McKnight, Lee F. Stanish, Terrill Yazzie, Cristina D. Takacs-Vesbach, Max Häggblom
FEMS Microbiology Ecology.2016; 92(10): fiw148. CrossRef - Taxonomic study of the genus Chamaesiphon (Chroococcales: Cyanoprokaryota) reported from India with two new distributional records
Sudipta Kumar Das
Feddes Repertorium.2015; 126(1-2): 22. CrossRef - Distribution and Ecology of Cyanobacteria in the Rocky Littoral of an English Lake District Water Body, Devoke Water
Allan Pentecost
Life.2014; 4(4): 1026. CrossRef
- Genomic Insights into the Bactericidal and Fungicidal Potential of Bacillus mycoides b12.3 Isolated in the Soil of Olkhon Island in Lake Baikal, Russia
- Bacterial Aggregates Formation After Addition of Glucose in Lake Baikal Water
- Lev P. Spiglazov , Valentin V. Drucker , Tae Seok Ahn
- J. Microbiol. 2004;42(4):357-360.
- DOI: https://doi.org/2098 [pii]
- 36 View
- 0 Download
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Abstract
- For determining the process of bacterial aggregation, glucose was added into water from Lake Baikal which had been stored for seven months. In the presence of a higher concentration of glucose, the abundance of single bacteria and aggregates were higher, but the biovolumes of both bacteria were similar. Theses results mean that both free-living and aggregated bacteria have similar maximum sizes and that aggregates are forming with available organic materials. With available organic materials, the biovolume of aggregates becomes larger.
- The Bacterial Community of Southern Lake Baikal in Winter
- Ahn, Tae Seok , Hong, Sun Hee , Kim, Dong Joo , Suck, Jung Hyun , Drucker, Valentin V.
- J. Microbiol. 1999;37(1):10-13.
- 40 View
- 0 Download
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Abstract
- The bacterial abundance, proportion of respiring bacteria, and bacterial community of southern Lake Baikal were analyzed at 1 m and 400m depths during winter. The total bacterial numbers were 5.1×10^5 cells m^l-1 at 1 m and 2.5×10^5 cells ml^-1 at 400 m depth, which are about half and quarter of the numbers of other lakes. The proportion of respiring bacteria was as low as 2.5% at 1 m and 1.4% at 400 m depth. Considering the amount of organic carbon which need to be degraded and low proportion of respiring bacteria, the bacteria could be assumed to have high activities. The EUB/DAPI ratios were 77 and 89% at 1 m and 400 m depths, respectively. Of the bacterial community, the other group was dominant at both depths, and gamma group of proteobacteria followed next. But the beta group of proteobacteria and Cytophaga-Flavobacterium groups occupied very small proportions.
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