Journal Article
- Whole genome and RNA sequencing of oral commensal bacterium Streptococcus anginosus subsp. anginosus with vancomycin tolerance
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Kyu Hwan Kwack , Jae-Hyung Lee , Ji-Hoi Moon
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J. Microbiol. 2022;60(2):167-176. Published online January 7, 2022
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DOI: https://doi.org/10.1007/s12275-022-1425-4
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Abstract
- “Antibiotic tolerance” promotes the rapid subsequent evolution
of “antibiotic resistance,” however, it is often overlooked
because it is difficult to distinguish between tolerant
and susceptible organisms. A commensal bacterium S. anginosus
subsp. anginosus strain KHUD_S1, isolated from dental
biofilm was found to exhibit a high MBC/MIC ratio of 32
against vancomycin. We observed KHUD_S1 cells exposed
to vancomycin did not grow but maintained viability. Transmission
electron microscope showed KHUD_S1 cells possessed
a dense, thick capsule and maintained the cell wall integrity
upon vancomycin exposure. To infer the underlying
mechanisms of the vancomycin tolerance in KHUD_S1, we
performed whole genome sequencing and RNA sequencing.
The KHUD_S1 genome carried three genes encoding branching
enzymes that can affect peptidoglycan structure through
interpeptide bridge formation. Global gene expression profiling
revealed that the vancomycin-induced downregulation
of carbohydrate and inorganic ion transport/metabolism as
well as translation is less prominent in KHUD_S1 than in the
vancomycin susceptible strain KHUD_S3. Based on the transcriptional
levels of genes related to peptidoglycan synthesis,
KHUD_S1 was determined to have a 3D peptidoglycan architecture
distinct from KHUD_S3. It was found that, under
vancomycin exposure, the peptidoglycan was remodeled
through changes in the interpeptide bridge and transpeptidation
reactions. Collectively, these features of S. anginosus
KHUD_S1, including a dense capsule and differential gene
expression in peptidoglycan synthesis, may contribute to vancomycin
tolerance. Our results showing the occurrence of
vancomycin tolerance amongst oral commensal bacteria highlight
the need for considering future strategies for screening
of antibiotic tolerance as an effort to reduce antibiotic resistance.
Research Support, Non-U.S. Gov't
- NOTE] Regulatory Characteristics of the Vibrio vulnificus rtxHCA Operon Encoding a MARTX Toxin
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Jinseo Park , Seung Min Kim , Hee Gon Jeong , Sang Ho Choi
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J. Microbiol. 2012;50(5):878-881. Published online September 21, 2012
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DOI: https://doi.org/10.1007/s12275-012-2479-5
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Abstract
- Vibrio vulnificus MARTX encoded by rtxA, an open reading frame of the rtxHCA operon, is essential for virulence in vitro and in mice. In this study, a primer extension analysis revealed that transcription of the rtxHCA operon begins at a single site, and is under the direction of a single promoter, PrtxHCA. PrtxHCA activity appeared at the beginning of growth and reached a maximum in mid-exponential phase. PrtxHCA activity was induced by exposure to INT-407 cells, and the membrane fraction of INT-407 cells was the most effective for the induction.