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Review
Structural Insights into the Lipopolysaccharide Transport (Lpt) System as a Novel Antibiotic Target
Yurim Yoon, Saemee Song
J. Microbiol. 2024;62(4):261-275.   Published online May 31, 2024
DOI: https://doi.org/10.1007/s12275-024-00137-w
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Journal Articles
Coumarin-based combined computational study to design novel drugs against Candida albicans
Akhilesh Kumar Maurya , Nidhi Mishra
J. Microbiol. 2022;60(12):1201-1207.   Published online November 10, 2022
DOI: https://doi.org/10.1007/s12275-022-2279-5
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  • Coumarin derivatives ameliorate the intestinal inflammation and pathogenic gut microbiome changes in the model of infectious colitis through antibacterial activity
    Hui-su Jung, Yei Ju Park, Bon-Hee Gu, Goeun Han, Woonhak Ji, Su mi Hwang, Myunghoo Kim
    Frontiers in Cellular and Infection Microbiology.2024;[Epub]     CrossRef
  • Therapeutic Effects of Coumarins with Different Substitution Patterns
    Virginia Flores-Morales, Ana P. Villasana-Ruíz, Idalia Garza-Veloz, Samantha González-Delgado, Margarita L. Martinez-Fierro
    Molecules.2023; 28(5): 2413.     CrossRef
  • Cyclometalated iridium(III) complexes combined with fluconazole: antifungal activity against resistant C. albicans
    Jun-Jian Lu, Zhi-Chang Xu, Hou Zhu, Lin-Yuan Zhu, Xiu-Rong Ma, Rui-Rui Wang, Rong-Tao Li, Rui-Rong Ye
    Frontiers in Cellular and Infection Microbiology.2023;[Epub]     CrossRef
Assessing the microcystins concentration through optimized protein phosphatase inhibition assay in environmental samples
Kyoung-Hee Oh , Kung-Min Beak , Yuna Shin , Young-Cheol Cho
J. Microbiol. 2022;60(6):602-609.   Published online April 30, 2022
DOI: https://doi.org/10.1007/s12275-022-2020-4
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  • Analyzing MC-LR distribution characteristics in natural lakes by a novel fluorescence technology
    Xiangyu Hu, Zhaomin Wang, Xiao Ye, Ping Xie, Yong Liu
    Environmental Pollution.2024; 342: 123123.     CrossRef
  • Magnetic solid phase extraction coupled with high-performance liquid chromatography-diode array detection based on assembled magnetic covalent organic frameworks for selective extraction and detection of microcystins in aquatic foods
    Tianliang Wang, Hongzhen Xie, Yuting Cao, Qing Xu, Ning Gan
    Journal of Chromatography A.2022; 1685: 463614.     CrossRef
Review
Coordinated regulation of interferon and inflammasome signaling pathways by SARS-CoV-2 proteins
Na-Eun Kim , Yoon-Jae Song
J. Microbiol. 2022;60(3):300-307.   Published online January 28, 2022
DOI: https://doi.org/10.1007/s12275-022-1502-8
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  • The impact of polymorphic variants of interferon receptor genes on COVID-19 severity and antibiotic resistance
    E. A. Krieger, O. V. Samodova, O. A. Svitich, R. V. Samoilikov, E. A. Meremianina, L. V. Ivanova, N. A. Bebyakova, E. N. Ilina, A. V. Pavlenko, Yu. I. Esin, A. L. Arkhipova, S. N. Kovalchuk, A. V. Kudryavtsev
    Russian Journal of Infection and Immunity.2024; 13(6): 1027.     CrossRef
  • SARS-CoV-2 ORF8 as a Modulator of Cytokine Induction: Evidence and Search for Molecular Mechanisms
    Marília Inês Móvio, Giovana Waner Carneiro de Almeida, Isabella das Graças Lopes Martines, Gilmara Barros de Lima, Sergio Daishi Sasaki, Alexandre Hiroaki Kihara, Emma Poole, Michael Nevels, Maria Cristina Carlan da Silva
    Viruses.2024; 16(1): 161.     CrossRef
  • Sensing of viral lung infections by cGAS-STING
    Lei Fang, Michael Roth
    Exploration of Immunology.2022; : 303.     CrossRef
  • Two years of COVID-19 pandemic: where are we now?
    Jinjong Myoung
    Journal of Microbiology.2022; 60(3): 235.     CrossRef
  • The Potential of Purinergic Signaling to Thwart Viruses Including SARS-CoV-2
    Davide Ferrari, Michele Rubini, Jorge S. Burns
    Frontiers in Immunology.2022;[Epub]     CrossRef
Journal Articles
The relationship between bacterial diversity and organic carbon mineralization in soft rock and sand compound soil
Zhen Guo , Juan Li , Lei Ge , Chenxi Yang , Jichang Han
J. Microbiol. 2020;58(9):750-760.   Published online July 24, 2020
DOI: https://doi.org/10.1007/s12275-020-0130-4
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  • Siltation of check dams alters microbial communities and thus limits organic carbon mineralization
    Xiaojun Liu, Yi Zhang, Peng Li, Lie Xiao
    Soil and Tillage Research.2024; 236: 105949.     CrossRef
  • Tree species mixing enhances rhizosphere soil organic carbon mineralization of conifers in subtropical plantations
    Wen-Qing Li, Zi-Jun Wu, Ying-Ying Zong, G. Geoff Wang, Fu-Sheng Chen, Yuan-Qiu Liu, Jian-Jun Li, Xiang-Min Fang
    Forest Ecology and Management.2022; 516: 120238.     CrossRef
  • Response of soil structure and crop yield to soft rock in Mu Us sandy land, China
    Jian Zhang, Zhen Guo
    Scientific Reports.2022;[Epub]     CrossRef
The effects of deletion of cellobiohydrolase genes on carbon source-dependent growth and enzymatic lignocellulose hydrolysis in Trichoderma reesei
Meibin Ren , Yifan Wang , Guoxin Liu , Bin Zuo , Yuancheng Zhang , Yunhe Wang , Weifeng Liu , Xiangmei Liu , Yaohua Zhong
J. Microbiol. 2020;58(8):687-695.   Published online June 10, 2020
DOI: https://doi.org/10.1007/s12275-020-9630-5
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  • An efficient CRISPR/Cas9 genome editing system based on a multiple sgRNA processing platform in Trichoderma reesei for strain improvement and enzyme production
    Jiaxin Zhang, Kehang Li, Yu Sun, Cheng Yao, Weifeng Liu, Hong Liu, Yaohua Zhong
    Biotechnology for Biofuels and Bioproducts.2024;[Epub]     CrossRef
  • Transcriptome-wide analysis of a superior xylan degrading isolate Penicillium oxalicum 5–18 revealed active lignocellulosic degrading genes
    Shuang Hu, Pei Han, Bao-Teng Wang, Long Jin, Hong-Hua Ruan, Feng-Jie Jin
    Archives of Microbiology.2024;[Epub]     CrossRef
  • Engineering the secretome of Aspergillus niger for cellooligosaccharides production from plant biomass
    Fernanda Lopes de Figueiredo, Fabiano Jares Contesini, César Rafael Fanchini Terrasan, Jaqueline Aline Gerhardt, Ana Beatriz Corrêa, Everton Paschoal Antoniel, Natália Sayuri Wassano, Lucas Levassor, Sarita Cândida Rabelo, Telma Teixeira Franco, Uffe Hasb
    Microbial Cell Factories.2024;[Epub]     CrossRef
  • Constitutive overexpression of cellobiohydrolase 2 in Trichoderma reesei reveals its ability to initiate cellulose degradation
    Yubo Wang, Meibin Ren, Yifan Wang, Lu Wang, Hong Liu, Mei Shi, Yaohua Zhong
    Engineering Microbiology.2023; 3(1): 100059.     CrossRef
  • Inducer-free recombinant protein production in Trichoderma reesei: secretory production of endogenous enzymes and heterologous nanobodies using glucose as the sole carbon source
    Toshiharu Arai, Mayumi Wada, Hiroki Nishiguchi, Yasushi Takimura, Jun Ishii
    Microbial Cell Factories.2023;[Epub]     CrossRef
  • The Influence of Trctf1 Gene Knockout by CRISPR–Cas9 on Cellulase Synthesis by Trichoderma reesei with Various Soluble Inducers
    Yudian Chen, Yushan Gao, Zancheng Wang, Nian Peng, Xiaoqin Ran, Tingting Chen, Lulu Liu, Yonghao Li
    Fermentation.2023; 9(8): 746.     CrossRef
  • The effect of cellobiohydrolase 1 gene knockout for composition and hydrolytic activity of the enzyme complex secreted by filamentous fungus Penicillium verruculosum
    Valeriy Yu. Kislitsin, Andrey M. Chulkin, Ivan N. Zorov, Yuri А. Denisenko, Arkadiy P. Sinitsyn, Alexandra M. Rozhkova
    Bioresource Technology Reports.2022; 18: 101023.     CrossRef
  • Deciphering the efficient cellulose degradation by the thermophilic fungus Myceliophthora thermophila focused on the synergistic action of glycoside hydrolases and lytic polysaccharide monooxygenases
    Xing Qin, Jiahuan Zou, Kun Yang, Jinyang Li, Xiaolu Wang, Tao Tu, Yuan Wang, Bin Yao, Huoqing Huang, Huiying Luo
    Bioresource Technology.2022; 364: 128027.     CrossRef
Review
MINIREVIEW] Bacterial persistence: Fundamentals and clinical importance
Sung-Hee Jung , Choong-Min Ryu , Jun-Seob Kim
J. Microbiol. 2019;57(10):829-835.   Published online August 28, 2019
DOI: https://doi.org/10.1007/s12275-019-9218-0
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  • Is Cryptococcus neoformans a pleomorphic fungus?
    Jessica CS Brown, Elizabeth R Ballou
    Current Opinion in Microbiology.2024; 82: 102539.     CrossRef
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    Shivani Yadav, Sharath Gowda, Reena Agrawal-Rajput
    International Immunopharmacology.2024; 143: 113477.     CrossRef
  • Antibiotic Resistance and Presence of Persister Cells in the Biofilm-like Environments in Streptococcus agalactiae
    Pamella Silva Lannes-Costa, Isabelle Rodrigues Fernandes, João Matheus Sobral Pena, Brunno Renato Farias Verçoza Costa, Marcel Menezes Lyra da Cunha, Bernadete Teixeira Ferreira-Carvalho, Prescilla Emy Nagao
    Antibiotics.2024; 13(11): 1014.     CrossRef
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    Dorota Kuczyńska-Wiśnik, Karolina Stojowska-Swędrzyńska, Ewa Laskowska
    Molecules.2024; 29(9): 2088.     CrossRef
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    Physical Review Research.2024;[Epub]     CrossRef
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    Nanna Boll Greve, Hans-Christian Slotved, John Elmerdahl Olsen, Line Elnif Thomsen, Musa Mohammed Ali
    PLOS ONE.2024; 19(6): e0303271.     CrossRef
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    Srimayee Pani, Saswat S. Mohapatra
    Archives of Microbiology.2024;[Epub]     CrossRef
  • Glyphosate affects persistence and tolerance but not antibiotic resistance
    Katia Ospino, Beny Spira
    BMC Microbiology.2023;[Epub]     CrossRef
  • Persistencia de microorganismos en el ambiente hospitalario
    Julio Adrián Martínez-Meléndez, Francisca Espiricueta-Candelaria, Flora Eduarda Cruz-López
    Revista Ciencia UANL.2023; 26(119): 8.     CrossRef
  • Development and Antibacterial Properties of 4-[4-(Anilinomethyl)-3-phenylpyrazol-1-yl]benzoic Acid Derivatives as Fatty Acid Biosynthesis Inhibitors
    Subrata Roy, Hansa Raj KC, Justin Roberts, Jared Hastings, David F. Gilmore, Robert C. Shields, Mohammad A. Alam
    Journal of Medicinal Chemistry.2023; 66(19): 13622.     CrossRef
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    Flora Cruz-López, Adrián Martínez-Meléndez, Elvira Garza-González
    Microorganisms.2023; 11(1): 192.     CrossRef
  • Molecular Mechanisms of Persistence in Protozoan Parasites
    Asfiha Tarannum, Cristian Camilo Rodríguez-Almonacid, Jorge Salazar-Bravo, Zemfira N. Karamysheva
    Microorganisms.2023; 11(9): 2248.     CrossRef
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    BMEMat.2023;[Epub]     CrossRef
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    Natural Product Reports.2023; 40(3): 595.     CrossRef
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    Advanced Therapeutics.2023;[Epub]     CrossRef
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    RSC Advances.2023; 13(12): 7798.     CrossRef
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    Jia Xin Yee, Juhyun Kim, Jinki Yeom
    Journal of Microbiology.2023; 61(3): 331.     CrossRef
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    Reviews and Research in Medical Microbiology.2023; 34(2): 110.     CrossRef
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    Microbiology Spectrum.2022;[Epub]     CrossRef
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    BMC Biology.2022;[Epub]     CrossRef
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    Adrián Martínez-Meléndez, Rayo Morfin-Otero, Licet Villarreal-Treviño, Simon D. Baines, Adrián Camacho-Ortíz, Elvira Garza-González
    Enfermedades Infecciosas y Microbiología Clínica.2022; 40(8): 445.     CrossRef
  • Evolution of Bacterial Persistence to Antibiotics during a 50,000-Generation Experiment in an Antibiotic-Free Environment
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    Antibiotics.2022; 11(4): 451.     CrossRef
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    Journal of Asia-Pacific Entomology.2022; 25(3): 101949.     CrossRef
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    Larissa Vieira Costa, Janaina Marcela Assunção Rosa Moreira, Isabela de Godoy Menezes, Valéria Dutra, Arleana do Bom Parto Ferreira de Almeida
    Veterinary World.2022; : 2499.     CrossRef
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    Reviews in Medical Microbiology.2022; 33(1): 56.     CrossRef
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    Wolfgang Eisenreich, Thomas Rudel, Jürgen Heesemann, Werner Goebel
    Frontiers in Cellular and Infection Microbiology.2022;[Epub]     CrossRef
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    Vaishali Kaushik, Monalisa Tiwari, Vishvanath Tiwari
    International Journal of Biological Macromolecules.2022; 217: 931.     CrossRef
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    Nelli F. Khabibullina, Daria M. Kutuzova, Irina A. Burmistrova, Irina V. Lyadova
    Tropical Medicine and Infectious Disease.2022; 7(3): 48.     CrossRef
  • Analysis of biofilm production and expression of adhesion structures of circulating Clostridioides difficile strains from Mexico
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    Enfermedades infecciosas y microbiologia clinica (English ed.).2022; 40(8): 445.     CrossRef
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    Frontiers in Cellular and Infection Microbiology.2021;[Epub]     CrossRef
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    Frontiers in Cellular and Infection Microbiology.2021;[Epub]     CrossRef
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    Theoretical Biology and Medical Modelling.2020;[Epub]     CrossRef
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    Tiep K. Nguyen, Frédéric Peyrusson, Magali Dodémont, Nhung H. Pham, Hoang A. Nguyen, Paul M. Tulkens, Françoise Van Bambeke
    Frontiers in Microbiology.2020;[Epub]     CrossRef
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    Nano-Micro Letters.2020;[Epub]     CrossRef
Journal Article
Comparative analysis of bacterial diversity in the rhizosphere of tomato by culture-dependent and -independent approaches
Shin Ae Lee , Jiyoung Park , Bora Chu , Jeong Myeong Kim , Jae-Ho Joa , Mee Kyung Sang , Jaekyeong Song , Hang-Yeon Weon
J. Microbiol. 2016;54(12):823-831.   Published online November 26, 2016
DOI: https://doi.org/10.1007/s12275-016-6410-3
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Citations

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Review
MINIREVIEW] Nontraditional Therapies to Treat Helicobacter pylori Infection
Morris O. Makobongo , Jeremy J. Gilbreath , D. Scott Merrell
J. Microbiol. 2014;52(4):259-272.   Published online March 29, 2014
DOI: https://doi.org/10.1007/s12275-014-3603-5
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