Journal of Microbiology

Journal Articles

Effects of tryptophan and phenylalanine on tryptophol production in Saccharomyces cerevisiae revealed by transcriptomic and metabolomic analyses: Xiaowei Gong , Huajun Luo , Liu Hong , Jun Wu , Heng Wu , Chunxia Song , Wei Zhao , Yi Han , Ya Dao , Xia Zhang , Donglai Zhu , Yiyong Luo; J. Microbiol. 2022;60(8):832-842. Published online May 27, 2022; DOI: https://doi.org/10.1007/s12275-022-2059-2

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Tryptophol (TOL) is a metabolic derivative of tryptophan (Trp) and shows pleiotropic effects in humans, plants and microbes. In this study, the effect of Trp and phenylalanine (Phe) on TOL production in Saccharomyces cerevisiae was determined, and a systematic interpretation of TOL accumulation was offered by transcriptomic and metabolomic analyses. Trp significantly promoted TOL production, but the output plateaued (231.02−266.31 mg/L) at Trp concentrations ≥ 0.6 g/L. In contrast, Phe reduced the stimulatory effect of Trp, which was strongly dependent on the Phe concentration. An integrated genomic, transcriptomic, and metabolomic analysis revealed that the effect of Trp and Phe on TOL production was mainly related to the transamination and decarboxylation of the Ehrlich pathway. Additionally, other genes, including thiamine regulon genes (this), the allantoin catabolic genes dal1, dal2, dal4, and the transcriptional activator gene aro80, may play important roles. These findings were partly supported by the fact that the thi4 gene was involved in TOL production, as shown by heterologous expression analysis. To the best of our knowledge, this novel biological function of thi4 in S. cerevisiae is reported here for the first time. Overall, our findings provide insights into the mechanism of TOL production, which will contribute to TOL production using metabolic engineering strategies.

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Engineering the L-tryptophan metabolism for efficient de novo biosynthesis of tryptophol in Saccharomyces cerevisiae
Ye Li, Jingzhen Sun, Zhenhao Fu, Yubing He, Xiaorui Chen, Shijie Wang, Lele Zhang, Jiansheng Jian, Weihua Yang, Chunli Liu, Xiuxia Liu, Yankun Yang, Zhonghu Bai
Biotechnology for Biofuels and Bioproducts.2024;[Epub] CrossRef
Evaluating the Atypical Aging Potential Development in Sparkling Wines Can Be Achieved by Assessing the Base Wines at the End of the Alcoholic Fermentation
Simone Delaiti, Tiziana Nardin, Tomas Roman, Stefano Pedò, Roberto Larcher
Journal of Agricultural and Food Chemistry.2024; 72(9): 4918. CrossRef
Tryptophol Improves the Biocontrol Efficacy of Scheffersomyces spartinae against the Gray Mold of Strawberries by Quorum Sensing
Zichang Zhao, Yingying Wei, Xiurong Zou, Shu Jiang, Yi Chen, Jianfen Ye, Feng Xu, Hongfei Wang, Xingfeng Shao
Journal of Agricultural and Food Chemistry.2023; 71(49): 19739. CrossRef
A comprehensive review and comparison of L-tryptophan biosynthesis in Saccharomyces cerevisiae and Escherichia coli
Xinru Ren, Yue Wei, Honglu Zhao, Juanjuan Shao, Fanli Zeng, Zhen Wang, Li Li
Frontiers in Bioengineering and Biotechnology.2023;[Epub] CrossRef

The role of Jacalin-related lectin gene AOL_s00083g511 in the development and pathogenicity of the nematophagous fungus Arthrobotrys oligospora: Xinyuan Dong , Jiali Si , Guanghui Zhang , Zhen Shen , Li Zhang , Kangliang Sheng , Jingmin Wang , Xiaowei Kong , Xiangdong Zha , Yongzhong Wang; J. Microbiol. 2021;59(8):736-745. Published online July 5, 2021; DOI: https://doi.org/10.1007/s12275-021-1029-4

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Abstract

Arthrobotrys oligospora is a model species of nematophagous fungi and has great potential for the biological control of nematode diseases. Lectin is a protein that binds to carbohydrates and their complexes with high specificity, which mediates recognition events in various physiological and pathological processes. This study aimed to investigate the role of the Jacalin-related lectin (JRL) gene, AOL_s00083g511, in A. oligospora development. Through a homology recombination approach, we obtained the AOL_s00083g511 knockout mutant strain (Δg511). Next, the biological characteristics of the Δg511 mutant strain, including growth rate, conidia germination rate, adaptation to environmental stresses, and nematocidal activity, were compared with those of the wild-type (WT) strain. The results showed that the JRL gene AOL_ s00083g511 did not affect fungal growth, conidia germination, 3D-trap formation, and the ability of A. oligospora to prey on nematodes significantly. We speculate that this phenomenon may be caused by a loss of the key β1–β2 loops in the AOL_ s00083g511-encoded JRL domain and an intrinsic genetic compensation of AOL_s00083g511 in this fungus. The growth rates of both strains on high salt or surfactant media were similar; however, in the strong oxidation medium, the growth rate of the Δg511 mutant was significantly lower than that of the WT strain, indicating that AOL_s00083g511 might play a role in oxidative stress resistance. These findings provide a basis for further analysis of the related functions of the JRL gene in A. oligospora and their potential roles in the biological control of nematodes in the future.

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Function discovery of a non-ribosomal peptide synthetase-like encoding gene in the nematode-trapping fungus Arthrobotrys oligospora
Tiantian Gu, Hengqian Lu, Huiwen Liu, Guanghui Zhang, Yongzhong Wang
Frontiers in Microbiology.2023;[Epub] CrossRef
The fucose-specific lectin gene AOL_s00054g276 affects trap formation and nematocidal activity of the nematophagous fungus Arthrobotrys oligospora
Jiali Si, Xinyuan Dong, Guanghui Zhang, Hengqian Lu, Kaijing Tang, Li Zhang, Xiaowei Kong, Kangliang Sheng, Jingmin Wang, Xiangdong Zha, Yongzhong Wang
FEMS Microbiology Letters.2022;[Epub] CrossRef
Phospholipase C (AoPLC2) regulates mycelial development, trap morphogenesis, and pathogenicity of the nematode-trapping fungus Arthrobotrys oligospora
Meihua Xie, Ni Ma, Na Bai, Meichen Zhu, Ke-Qin Zhang, Jinkui Yang
Journal of Applied Microbiology.2022; 132(3): 2144. CrossRef

The effect of the HRB linker of Newcastle disease virus fusion protein on the fusogenic activity: Yaqing Liu , Ying Liu , Yanan Huang , Hongling Wen , Li Zhao , Yanyan Song , Zhiyu Wang; J. Microbiol. 2021;59(5):513-521. Published online March 29, 2021; DOI: https://doi.org/10.1007/s12275-021-0539-4

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Abstract

Newcastle disease, designated a class A disease of poultry by the Office international des epizooties (OIE), is an acute infection caused by Newcastle disease virus (NDV). The merging of the envelope of NDV with the membrane of a target host cell is the key step in the infection pathway, which is driven by the concerted action of two glycoproteins: haemagglutinin- neuraminidase (HN) and fusion (F) protein. When the HN protein binds to the host cell surface receptor, the F protein is activated to mediate fusion. The three-dimensional structure of the F protein has been reported to have low electron density between the DIII domain and the HRB domain, and this electron-poor region is defined as the HRB linker. To clarify the contributing role of the HRB linker in the NDV F protein-mediated fusion process, 6 single amino acid mutants were obtained by site-directed mutagenesis of the HRB linker. The expression of the mutants and their abilities to mediate fusion were analysed, and the key amino acids in the HRB linker were identified as L436, E439, I450, and S453, as they can modulate the fusion ability or expression of the active form to a certain extent. The data shed light on the crucial role of the F protein HRB linker in the acquisition of a normal fusogenic phenotype.

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Evaluation of Newcastle disease virus LaSota strain attenuated by codon pair deoptimization of the HN and F genes for in ovo vaccination
Fatma Eldemery, Changbo Ou, Taejoong Kim, Stephen Spatz, John Dunn, Robert Silva, Qingzhong Yu
Veterinary Microbiology.2023; 277: 109625. CrossRef
Prevalence and Molecular Characterization of Bovine Parainfluenza Virus Type 3 in Cattle Herds in China
Yunxin Ren, Cheng Tang, Hua Yue
Animals.2023; 13(5): 793. CrossRef
Direct interaction of the molecular chaperone GRP78/BiP with the Newcastle disease virus hemagglutinin-neuraminidase protein plays a vital role in viral attachment to and infection of culture cells
Chenxin Han, Ziwei Xie, Yadi Lv, Dingxiang Liu, Ruiai Chen
Frontiers in Immunology.2023;[Epub] CrossRef
Adaptor complex-mediated trafficking of Newcastle disease virus fusion protein is regulated by the YLMY motif of its cytoplasmic tail
Yawen Bu, Qingyuan Teng, Delan Feng, Rong Liang, Haoran Wang, Xuehui Zhang, Xiao Li, Wenfeng Jia, Jia Xue, Ye Zhao, Guozhong Zhang
Virulence.2022; 13(1): 1849. CrossRef
YLMY Tyrosine Residue within the Cytoplasmic Tail of Newcastle Disease Virus Fusion Protein Regulates Its Surface Expression to Modulate Viral Budding and Pathogenicity
Yawen Bu, Qingyuan Teng, Delan Feng, Lu Sun, Jia Xue, Guozhong Zhang, Peter Pelka
Microbiology Spectrum.2021;[Epub] CrossRef

Characteristic and role of chromosomal type II toxin-antitoxin systems locus in Enterococcus faecalis ATCC29212: Zhen Li , Chao Shi , Shanjun Gao , Xiulei Zhang , Di Lu , Guangzhi Liu; J. Microbiol. 2020;58(12):1027-1036. Published online October 23, 2020; DOI: https://doi.org/10.1007/s12275-020-0079-3

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Abstract

The Gram-positive bacterium Enterococcus faecalis is currently one of the major pathogens of nosocomial infections. The lifestyle of E. faecalis relies primarily on its remarkable capacity to face and survive in harsh environmental conditions. Toxin-antitoxin (TA) systems have been linked to the growth control of bacteria in response to adverse environments but have rarely been reported in Enterococcus. Three functional type II TA systems were identified among the 10 putative TA systems encoded by E. faecalis ATCC29212. These toxin genes have conserved domains homologous to MazF (DR75_ 1948) and ImmA/IrrE family metallo-endopeptidases (DR75_ 1673 and DR75_2160). Overexpression of toxin genes could inhibit the growth of Escherichia coli. However, the toxin DR75_1673 could not inhibit bacterial growth, and the bacteriostatic effect occurred only when it was coexpressed with the antitoxin DR75_1672. DR75_1948–DR75_1949 and DR75_ 160–DR75_2161 could maintain the stable inheritance of the unstable plasmid pLMO12102 in E. coli. Moreover, the transcription levels of these TAs showed significant differences when cultivated under normal conditions and with different temperatures, antibiotics, anaerobic agents and H2O2. When DR75_2161 was knocked out, the growth of the mutant strain at high temperature and oxidative stress was limited. The experimental characterization of these TAs loci might be helpful to investigate the key roles of type II TA systems in the physiology and environmental stress responses of Enterococcus.

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Sonic-assisted antibacterial photodynamic therapy: a strategy for enhancing lateral canal disinfection
Yanhuang Wang, Lishan Lei, Jing Huang, Zhiyu Cai, Xiaojing Huang
BMC Oral Health.2024;[Epub] CrossRef
Unveiling the impact of antibiotic stress on biofilm formation and expression of toxin-antitoxin system genes in Clostridium difficile clinical isolates
Nasim Cheraghi, Saeed Khoshnood, Nourkhoda Sadeghifard, Niloufar Khodaei, Parisa Asadollahi, Saiyad Bastaminejad, Ebrahim Kouhsari, Nazanin Omidi, Behrooz Sadeghi Kalani
Molecular Biology Reports.2024;[Epub] CrossRef
Edwardsiella piscicida HigB: A type II toxin that is essential to oxidative resistance, biofilm formation, serum survival, intracellular propagation, and host infection
Jinhong Xie, Qianyun Zhao, Huiqin Huang, Zaiguang Fang, Yonghua Hu
Aquaculture.2021; 535: 736382. CrossRef

Sequence analysis of the first B5 subgenogroup strain of enterovirus 71 isolated in Korea: Yu Jung Won , Lae Hyung Kang , Ah Ra Lee , Bomina Paik , Hyun Kim , Sung Geun Lee , Seung Won Park , Seung Jin Hong , Soon Young Paik; J. Microbiol. 2020;58(5):422-429. Published online March 28, 2020; DOI: https://doi.org/10.1007/s12275-020-9539-z

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Abstract: Enterovirus A71 (EV71), the main etiological agent of handfoot- mouth disease (HFMD), circulates in many areas of the world and has caused large epidemics since 1997, especially in the Asia-Pacific region. In this study, we determined the full-genome sequence of CMC718, a newly isolated EV71 strain in Korea. The CMC718 genome was 7,415 nucleotides in length and was confirmed by whole-genome phylogenetic analysis to belong to the B5 genotype. In particular, CMC718 demonstrated maximum identity with strain M988 of the B5 genotype and numerous amino acid variants were detected in the 3D domain of the viral protein P3, which is consistent with the mutation pattern of a B5 strain isolated in 2012–2013. Comparison of the CMC718 sequence with other EV71 reference strains confirmed the relationship and genetic variation of CMC718. Our study was a full-genome sequence analysis of the first EV71 strain of the B5 genotype isolated in South Korea. This information will be a valuable reference for the development of methods for the detection of recombinant viruses, the tracking of infections, and the diagnosis of EV71.

Methylobacterium terrae sp. nov., a radiation-resistant bacterium isolated from gamma ray-irradiated soil: Jiyoun Kim , Geeta Chhetri , Inhyup Kim , Hyungdong Kim , Myung Kyum Kim , Taegun Seo; J. Microbiol. 2019;57(11):959-966. Published online August 28, 2019; DOI: https://doi.org/10.1007/s12275-019-9007-9

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Abstract

A Gram-stain-negative, asporogenous, aerobic rods, motile by means of a single polar flagellum, catalase- and oxidase-positive, methylotrophic bacterium, designated 17Sr1-28T, was isolated from gamma ray-irradiated soil. The 16S rRNA gene sequence analysis showed that strain 17Sr1-28T was phylogenetically related to Methylobacterium currus PR1016AT (96.8%), Methylobacterium platani PMB02T (96.2%), Methylobacterium aquaticum DSM 16371T (96.3%), Methylobacterium tarhaniae N4211T (96.4%), Methylobacterium frigidaeris IER25-16T (95.8%), and Methylobacterium organophilum JCM 2833T (92.7%). The G+C content calculated based on genome sequence was 71.6%. The average nucleotide identity and in silico DNA-DNA hybridization values between strain 17Sr1- 28T and M. currus, M. platani, M. aquaticum, M. tarhaniae, M. frigidaeris, and M. organophilum were 77.7–90.4% and 22–39.6%, respectively. The major fatty acids of strain 17Sr1- 28T were summed feature 8 (C18:1 ω7c and/or C18:1 ω6c), and summed feature 3 (C16:1 ω7c and/or C16:1 ω6c). The predominant quinone was ubiquinone 10 and the major polar lipids were diphosphatidylglycerol, phosphatidylcholine, phosphatidylethanolamine, and phosphatidylglycerol. On the basis of the data from phenotypic tests and genotypic differences between strain 17Sr1-28T and its close phylogenetic relatives, strain 17Sr1-28T represents a new species belonging to the genus Methylobacterium, for which the name Methylobacterium terrae sp. nov. (= KCTC 52904T = NBRC 112873T) is proposed.

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Exploring the diversity and potential functional characteristics of microbiota associated with different compartments of Schisandra chinensis
Wenjuan Hou, Yanping Xing, Hefei Xue, Yanchang Huang, Yutong Huang, Wenxiao Men, Yanyun Yang, Tingguo Kang, Deqiang Dou, Han Zheng, Liang Xu
Frontiers in Microbiology.2024;[Epub] CrossRef
Detoxification pathways of multiple metals from intensive copper production by indigenous ureolytic microbes coupled with soil nitrogen transformation
Juan Zhang, Shuo Wang, Xin Wang, Minghua Zhang, Shukai Fan
Journal of Cleaner Production.2023; 384: 135643. CrossRef
Devosia oryzisoli sp. nov., a novel moderately halotolerant bacterium isolated from the roots of rice plants and genome mining revealed the biosynthesis potential as plant growth promoter
Geeta Chhetri, Inhyup Kim, Taegun Seo
Antonie van Leeuwenhoek.2023; 116(3): 231. CrossRef
Identification of Mucilaginibacter conchicola sp. nov., Mucilaginibacter achroorhodeus sp. nov. and Mucilaginibacter pallidiroseus sp. nov. and emended description of the genus Mucilaginibacter
Jiyoun Kim, Byungjo Lee, Geeta Chhetri, Inhyup Kim, Yoonseop So, Wonhee Jang, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Devosia rhizoryzae sp. nov., and Devosia oryziradicis sp. nov., novel plant growth promoting members of the genus Devosia, isolated from the rhizosphere of rice plants
Geeta Chhetri, Inhyup Kim, Minchung Kang, Jiyoun Kim, Yoonseop So, Taegun Seo
Journal of Microbiology.2022; 60(1): 1. CrossRef
Cohnella terricola sp. nov., isolated from soil
Jiyoun Kim, Geeta Chhetri, Inhyup Kim, Minchung Kang, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Metataxonomic analysis of tissue-associated microbiota in grooved carpet-shell (Ruditapes decussatus) and Manila (Ruditapes philippinarum) clams
Diego Gerpe, Aide Lasa, Alberto Lema, Jesús L. Romalde
International Microbiology.2021; 24(4): 607. CrossRef
Comprehensive Comparative Genomics and Phenotyping of Methylobacterium Species
Ola Alessa, Yoshitoshi Ogura, Yoshiko Fujitani, Hideto Takami, Tetsuya Hayashi, Nurettin Sahin, Akio Tani
Frontiers in Microbiology.2021;[Epub] CrossRef
Fuscibacter oryzae gen. nov., sp. nov., a phosphate-solubilizing bacterium isolated from the rhizosphere of rice plant
Geeta Chhetri, Minchung Kang, Jiyoun Kim, Inhyup Kim, Yoonseop So, Taegun Seo
Antonie van Leeuwenhoek.2021; 114(9): 1453. CrossRef
The Macleaya cordata Symbiont: Revealing the Effects of Plant Niches and Alkaloids on the Bacterial Community
Fangying Lei, Xueduan Liu, Haonan Huang, Shaodong Fu, Kai Zou, Shuangfei Zhang, Li Zhou, Jianguo Zeng, Hongwei Liu, Luhua Jiang, Bo Miao, Yili Liang
Frontiers in Microbiology.2021;[Epub] CrossRef
International Committee on Systematics of Prokaryotes Subcommittee on the Taxonomy of Rhizobia and Agrobacteria Minutes of the closed meeting by videoconference, 6 July 2020
Philippe de Lajudie, Seyed Abdollah Mousavi, J. Peter W. Young
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Nocardioides baculatus sp. nov., a novel actinomycete isolated from the rhizosphere of Tagetes patula
Geeta Chhetri, Inhyup Kim, Minchung Kang, Jiyoun Kim, Yoonseop So, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Oryzicola mucosus gen. nov., sp. nov., a novel slime producing bacterium belonging to the family Phyllobacteriaceae isolated from the rhizosphere of rice plants
Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Minchung Kang, Yoonseop So, Taegun Seo
Antonie van Leeuwenhoek.2021; 114(11): 1925. CrossRef
Methylobacterium ajmalii sp. nov., Isolated From the International Space Station
Swati Bijlani, Nitin K. Singh, V. V. Ramprasad Eedara, Appa Rao Podile, Christopher E. Mason, Clay C. C. Wang, Kasthuri Venkateswaran
Frontiers in Microbiology.2021;[Epub] CrossRef
Reinekea thalattae sp. nov., a New Species of the Genus Reinekea Isolated from Surface Seawater in Sehwa Beach
Inhyup Kim, Geeta Chhetri, Jiyoun Kim, Minchung Kang, Taegun Seo
Current Microbiology.2020; 77(12): 4174. CrossRef
Methylobacterium durans sp. nov., a radiation-resistant bacterium isolated from gamma ray-irradiated soil
Jiyoun Kim, Geeta Chhetri, Inhyup Kim, Myung Kyum Kim, Taegun Seo
Antonie van Leeuwenhoek.2020; 113(2): 211. CrossRef
International Committee on Systematics of Prokaryotes Subcommittee on the Taxonomy of Rhizobia and Agrobacteria Minutes of the closed meeting by videoconference, 17 July 2019
Philippe de Lajudie, J. Peter W. Young
International Journal of Systematic and Evolutionary Microbiology .2020; 70(5): 3563. CrossRef
Methylobacterium terricola sp. nov., a gamma radiation-resistant bacterium isolated from gamma ray-irradiated soil
Jiyoun Kim, Geeta Chhetri, Inhyup Kim, Byungjo Lee, Wonhee Jang, Myung Kyum Kim, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2020; 70(4): 2449. CrossRef
Lewinella aurantiaca sp. nov., a carotenoid pigment-producing bacterium isolated from surface seawater
Inhyup Kim, Geeta Chhetri, Jiyoun Kim, Minchung Kang, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2020; 70(12): 6180. CrossRef
Flavobacterium baculatum sp. nov., a carotenoid and flexirubin-type pigment producing species isolated from flooded paddy field
Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Minchung Kang, Byungjo Lee, Wonhee Jang, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2019;[Epub] CrossRef

Review

[MINIREVIEW] Phylogenetic comparison of Epstein-Barr virus genomes: Su Jin Choi , Seok Won Jung , Sora Huh , Hyosun Cho , Hyojeung Kang; J. Microbiol. 2018;56(8):525-533. Published online June 14, 2018; DOI: https://doi.org/10.1007/s12275-018-8039-x

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Abstract

Technologies used for genome analysis and whole genome sequencing are useful for us to understand genomic characterization and divergence. The Epstein-Barr virus (EBV) is an oncogenic virus that causes diverse diseases such as Burkitt’s lymphoma (BL), nasopharyngeal carcinoma (NPC), Hodgkin’s lymphoma (HL), and gastric carcinoma (GC). EBV genomes found in these diseases can be classified either by phases of EBV latency (type-I, -II, and -III latency) or types of EBNA2 sequence difference (type-I EBV, type-II EBV or EBV-1, EBV-2). EBV from EBV-transformed lymphoblastoid cell line (LCL) establishes type-III latency, EBV from NPC establishes type-II latency, and EBV from GC establishes type-I latency. However, other important factors play key roles in classifying numerous EBV strains because EBV genomes are highly diverse and not phylogenetically related to types of EBV-associated diseases. Herein, we first reviewed previous studies to describe molecular characteristics of EBV genomes. Then, using comparative and phylogenetic analyses, we phylogenetically analyzed molecular variations of EBV genomes and proteins. The review of previous studies and our phylogenetic analysis showed that EBV genomes and proteins were highly diverse regardless of types of EBV-associated diseases. Other factors should be considered in determining EBV taxonomy. This review will be helpful to understand complicated phylogenetic relationships of EBV genomes.

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Philippe L. Furlano, Georg A. Böhmig, Elisabeth Puchhammer-Stöckl, Hannes Vietzen
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Jing Li, Duo Shi, Zhiyuan Gong, Wen Liu, Yan Zhang, Bing Luo
Virus Genes.2024; 60(5): 488. CrossRef
Characterization of a new CCCTC-binding factor binding site as a dual regulator of Epstein-Barr virus latent infection
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Eddy O. Agwati, Cliff I. Oduor, Cyrus Ayieko, John Michael Ong’echa, Ann M. Moormann, Jeffrey A. Bailey
Virology Journal.2022;[Epub] CrossRef
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Oren Shechter, Daniel G. Sausen, Elisa S. Gallo, Harel Dahari, Ronen Borenstein
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Journal Articles

UBCG: Up-to-date bacterial core gene set and pipeline for phylogenomic tree reconstruction: Seong-In Na , Yeong Ouk Kim , Seok-Hwan Yoon , Sung-min Ha , Inwoo Baek , Jongsik Chun; J. Microbiol. 2018;56(4):280-285. Published online February 28, 2018; DOI: https://doi.org/10.1007/s12275-018-8014-6

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Abstract

Genome-based phylogeny plays a central role in the future taxonomy and phylogenetics of Bacteria and Archaea by replacing 16S rRNA gene phylogeny. The concatenated core gene alignments are frequently used for such a purpose. The bacterial core genes are defined as single-copy, homologous genes that are present in most of the known bacterial species. There have been several studies describing such a gene set, but the number of species considered was rather small. Here we present the up-to-date bacterial core gene set, named UBCG, and software suites to accommodate necessary steps to generate and evaluate phylogenetic trees. The method was successfully used to infer phylogenomic relationship of Escherichia and related taxa and can be used for the set of genomes at any taxonomic ranks of Bacteria. The UBCG pipeline and file viewer are freely available at https://www.ezbiocloud.net/ tools/ubcg and https://www.ezbiocloud.net/tools/ubcg_viewer, respectively.

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Unveiling novel antimicrobial peptides from the ruminant gastrointestinal microbiomes: A deep learning-driven approach yields an anti-MRSA candidate
Hong Shen, Yanru Li, Qingjie Pi, Junru Tian, Xianghan Xu, Zan Huang, Jinghu Huang, Cong Pian, Shengyong Mao
Journal of Advanced Research.2025;[Epub] CrossRef
Altererythrobacter arenosus sp. nov., Isolated from Marine Sediment
Soyeon Ahn, Yunjeong Lee, Veeraya Weerawongwiwat, Jong-Hwa Kim, Jung-Sook Lee, Jung-Hoon Yoon, Ampaitip Sukhoom, Wonyong Kim
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A metagenomic ‘dark matter’ enzyme catalyses oxidative cellulose conversion
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Paenibacillus zeirhizosphaerae sp. nov., isolated from surface of the maize (Zea mays) roots in a horticulture field, Hungary
Dalma Márton, Milán Farkas, Anna Bedics, Erika Tóth, András Táncsics, Károly Bóka, Gergely Maróti, Erzsébet Baka, Balázs Kriszt, Mátyás Cserháti
International Journal of Systematic and Evolutionary Microbiology .2025;[Epub] CrossRef
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Genomic insights into Marinospirillum alkalitolerans sp. nov., a novel PHB producing bacterium from an Indian impact crater, and an emended description of family Oceanospirillaceae
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Cerasicoccus fimbriatus sp. nov., isolated from the mid-ridge of the Southwest Indian Ocean
Xuanyun Qiu, Beihan Chen, Dan Lin, Guohua Liu, Zhiyi Su, Mingzhe Zhang, Kai Tang
Antonie van Leeuwenhoek.2025;[Epub] CrossRef
Thiobacillus sedimenti sp. nov., a chemolithoautotrophic sulphur-oxidizing bacterium isolated from freshwater sediment
Chenming Dai, Guangye Zhang, Weitie Lin, Jianfei Luo
Antonie van Leeuwenhoek.2025;[Epub] CrossRef
Arvimicrobium flavum gen. nov., sp. nov., A Novel Genus in the Family Phyllobacteriaceae Isolated From Forest Soil
Hyosun Lee, Dhiraj Kumar Chaudhary, Ki-Eun Lee, In-Tae Cha, Won-Jae Chi, Sunho Park, Taegun Seo, Dong-Uk Kim
Current Microbiology.2025;[Epub] CrossRef
Flavobacterium arundinis sp. nov., Flavobacterium calami sp. nov., Flavobacterium helocola sp. nov. and Flavobacterium flavipallidum sp. nov., isolated from stagnant water in a clump of Phragmites japonica Steud
Sunho Park, Inhyup Kim, Haejin Woo, Hyunji Lee, Subin Yook, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2025;[Epub] CrossRef
Facivitalis istanbulensis gen. nov., sp. nov., a novel member of the family Sphingomonadaceae with the potential for aromatic-degradation isolated from Jet A1 fuel
Simge Arkan-Ozdemir, Miray Üstüntürk-Onan, Esra Ilhan-Sungur
Antonie van Leeuwenhoek.2025;[Epub] CrossRef
Streptacidiphilus alkalitolerans sp. nov., Streptacidiphilus cavernicola sp. nov. and Streptacidiphilus jeojiensis sp. nov. isolated from a cave, and an emended description of the genus Streptacidiphilus
Soon Dong Lee, Hong Lim Yang, In Seop Kim
International Journal of Systematic and Evolutionary Microbiology .2025;[Epub] CrossRef
Brevibacterium litoralis sp. nov., a cellulose-degrading strain isolated from marine surface sediment
Quan Yang, Aolin Zhao, Haifei Liu, Jiawei Li, Shujing Wu, Ying Huang, Jie Weng, Mingguo Jiang, Yi Jiang
Antonie van Leeuwenhoek.2025;[Epub] CrossRef
Microbacterium rhizophilus sp. nov., an indole acetic acid-producing actinobacterium isolated from rhizosphere soil
Haifei Liu, Quan Yang, Jiawei Li, Lifang Yang, Aolin Zhao, Ying Huang, Hongcun Liu, Shujing Wu, Mingguo Jiang
Antonie van Leeuwenhoek.2025;[Epub] CrossRef
Roseobacter sinensis sp. nov., a marine bacterium capable to synthesize arachidonic acid
Hong-Chuan Wang, Meng-Han Huang, Dan-Yuan Guo, Wen-Li Liu, Zi-Wen Yang, Dao-Feng Zhang, Wen-Jun Li
Antonie van Leeuwenhoek.2025;[Epub] CrossRef
Comprehensive genomic and phenotypic characterization of thermophilic bacterium Sinimarinibacterium thermocellulolyticum sp. nov. HSW-8T, a cellulase-producing bacterium isolated from hot spring water in South Korea
Yue Jiang, Zhun Li
Antonie van Leeuwenhoek.2025;[Epub] CrossRef
Mesorhizobium salmacidum sp. nov. and Mesorhizobium argentiipisi sp. nov. are symbionts of the dry-land forage legumes Lessertia diffusa and Calobota sericea
Esther K. Muema, Melandré van Lill, Stephanus N. Venter, Wai Yin Chan, Ricu Claassens, Emma T. Steenkamp
Antonie van Leeuwenhoek.2025;[Epub] CrossRef
Tetrameric PilZ protein stabilizes stator ring in complex flagellar motor and is required for motility in Campylobacter jejuni
Yuanyuan Chen, Shoichi Tachiyama, Yuqian Li, Xueyin Feng, Hang Zhao, Yanmin Wu, Yu Guo, María Lara-Tejero, Canfeng Hua, Jun Liu, Beile Gao
Proceedings of the National Academy of Sciences.2025;[Epub] CrossRef
Proposal of Lactococcus intestinalis Sun et al. 2024 as a Later Heterotypic Synonym of Lactococcus muris Afrizal et al. 2023
Xin-Yu Zhu, Chun Tao Gu
Current Microbiology.2025;[Epub] CrossRef
Isolation and characterization of a novel lytic phage K14-2 infecting diverse species of the genus Klebsiella and Raoultella
Seomin Kang, Jeong-Eun Han, Young-Sik Choi, In-Chul Jeong, Jin-Woo Bae
Frontiers in Microbiology.2025;[Epub] CrossRef
Jannaschia ovalis sp. nov., a marine bacterium isolated from a tidal flat sediment in the Republic of Korea
Dae Young Kwon, Sang Hyun Lee, Jong Seong Khim, Xiaoyue Xu, Bogun Kim, In-Geol Choi, Yeonjae Yoo, Jae-Jin Kim
Antonie van Leeuwenhoek.2025;[Epub] CrossRef
Erwinia aeris sp. nov., A Novel Bacterium Isolated from the Surface of an Ore in Hubei Province, China
He-Bao Guo, Hong-Tu Zhu, Yi-Fan Zhang, Fu Yang, Xiao-Tong Ma, Shi-Gui Li, Hai-Lei Wei, Xiao-Xia Zhang
Current Microbiology.2025;[Epub] CrossRef
Assessing hydrocarbon degradation capacity of Isoptericola peretonis sp. nov. and related species: a comparative study
Àngela Vidal-Verdú, Adriel Latorre-Pérez, Javier Pascual, Ruth Mañes-Collado, Aitana Nevot-Terraes, Manuel Porcar
Frontiers in Microbiology.2025;[Epub] CrossRef
Unveiling root nodulation in Tribulus terrestris and Roystonea regia via metagenomics analysis
Saleh Rahimlou, Mahdieh S. Hosseyni Moghadam, Romina Gazis, Elena Karlsen-Ayala, Mohammad Bahram, Timothy Y. James, Leho Tedersoo
Molecular Genetics and Genomics.2025;[Epub] CrossRef
Methylobacterium litchii sp. nov., Methylobacterium guangdongense sp. nov. and Methylorubrum subtropicum sp. nov., isolated from the phyllosphere of litchi
Ruifeng Gao, Jiali Li, Huaping Li, Xinqiang Xie, Guang-Da Feng, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology .2025;[Epub] CrossRef
Aquibaculum arenosum gen. nov., sp. nov., a novel member of the family Rhodovibrionaceae, isolated from sea sand
Soyeon Ahn, David Hyung-Sun Choi, Veeraya Weerawongwiwat, Jong-Hwa Kim, Ampaitip Sukhoom, Wonyong Kim
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
The analysis of complete genome sequence and comparative genomics of Vibrio parahaemolyticus LF1113 in Hainan
Linlin Hu, Aiyun Meng, Zhigang Tu, Shuwen Jia, Qingming Liu, Fuxiao Chen
Infection, Genetics and Evolution.2024; 119: 105574. CrossRef
Organic matter degradation in the deep, sulfidic waters of the Black Sea: insights into the ecophysiology of novel anaerobic bacteria
Subhash Yadav, Michel Koenen, Nicole J. Bale, Wietse Reitsma, Julia C. Engelmann, Kremena Stefanova, Jaap S. Sinninghe Damsté, Laura Villanueva
Microbiome.2024;[Epub] CrossRef
Extremely oligotrophic and complex-carbon-degrading microaerobic bacteria from Arabian Sea oxygen minimum zone sediments
Jagannath Sarkar, Mahamadul Mondal, Sabyasachi Bhattacharya, Subhajit Dutta, Sumit Chatterjee, Nibendu Mondal, Saran N, Aditya Peketi, Aninda Mazumdar, Wriddhiman Ghosh
Archives of Microbiology.2024;[Epub] CrossRef
Brooklawnia propionicigenes sp. nov., a facultatively anaerobic, propionate-producing bacterium isolated from a methanogenic reactor treating waste from cattle farms
Yasumitsu Akita, Atsuko Ueki, Akio Tonouchi, Yoshimichi Sugawara, Sachi Honma, Nobuo Kaku, Katsuji Ueki
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Reclassification of Aestuariicella albida as Pseudomaricurvus albidus comb. nov. and Aestuariicella hydrocarbonica as Pseudomaricurvus hydrocarbonicus comb. nov. Based on Comparative Genomics and Molecular Synapomorphies
Jake Adolf V. Montecillo, Merell P. Billacura, Maria Distressa G. Billacura
Current Microbiology.2024;[Epub] CrossRef
Advancements in prokaryotic systematics and the role of Bergey's International Society for Microbial Systematicsin addressing challenges in the meta-data era
Jian-Yu Jiao, Rashidin Abdugheni, Dao-Feng Zhang, Iftikhar Ahmed, Mukhtiar Ali, Maria Chuvochina, Svetlana N Dedysh, Xiuzhu Dong, Markus Göker, Brian P Hedlund, Philip Hugenholtz, Kamlesh Jangid, Shuang-Jiang Liu, Edward R B Moore, Manik Prabhu Narsing Ra
National Science Review.2024;[Epub] CrossRef
Terrirubrum flagellatum gen. nov., sp. nov. of Terrirubraceae fam. nov. and Lichenibacterium dinghuense sp. nov. from forest soil and proposal of Rhodoblastaceae fam. nov.
Xiu-yin Guo, Qiu-mei Zhang, Jia-cheng Fu, Li-hong Qiu
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Shewanella goraebulensis sp. nov., isolated from sea water
Yong-Suk Lee, Hae-Rin Jeong, Eun-Jung Hwang, Maheshkumar Prakash Patil, Yong Bae Seo, Gun-Do Kim
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Acidovorax benzenivorans sp. nov., a novel aromatic hydrocarbon-degrading bacterium isolated from a xylene-degrading enrichment culture
Anna Bedics, András Táncsics, Sinchan Banerjee, Erika Tóth, Péter Harkai, Gerda Georgina Gottschall, Károly Bóka, Balázs Kriszt
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Halosquirtibacter laminarini gen. nov., sp. nov. and Halosquirtibacter xylanolyticus sp. nov., marine anaerobic laminarin and xylan degraders in the phylum Bacteroidota
Tra T. H. Nguyen, Tien Q. Vuong, Ho Le Han, Song-Gun Kim
Scientific Reports.2024;[Epub] CrossRef
Improving plant salt tolerance through Algoriphagus halophytocola sp. nov., isolated from the halophyte Salicornia europaea
Yuxin Peng, Dong Hyun Cho, Zalfa Humaira, Yu Lim Park, Ki Hyun Kim, Cha Young Kim, Jiyoung Lee
Frontiers in Microbiology.2024;[Epub] CrossRef
Microbacterium abyssi sp. nov. and Microbacterium limosum sp. nov., two new species of the genus Microbacterium, isolated from deep-sea sediment samples
Yihan Ding, Xiaorui Ding, Yiting Chen, Shiping Wei, Gaiyun Zhang
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Terrihabitans rhizophilus sp. nov., isolated from the rhizosphere soil of plant in temperate semi-arid steppe
Runze Bao, Huiling Guo, Yungang Liang, Kai Tang, Fuying Feng, Jianyu Meng
Antonie van Leeuwenhoek.2024;[Epub] CrossRef
Fictibacillus fluitans sp. nov., isolated from freshwater pond
Amit Yadav, Akanksha Maurya, Yash Bhavsar, Ruchi Teware, Agrima Bhatt, Elaine DaCosta, Vipool Thorat, Kiran Kirdat, Syed G. Dastager
Archives of Microbiology.2024;[Epub] CrossRef
Microbial acidification by N, S, Fe and Mn oxidation as a key mechanism for deterioration of subsea tunnel sprayed concrete
Sabina Karačić, Carolina Suarez, Per Hagelia, Frank Persson, Oskar Modin, Paula Dalcin Martins, Britt-Marie Wilén
Scientific Reports.2024;[Epub] CrossRef
Xanthomonas rydalmerensis sp. nov., a non-pathogenic member of Group 1 Xanthomonas
Daniel J. E. McKnight, Johanna Wong-Bajracharya, Efenaide B. Okoh, Fridtjof Snijders, Fiona Lidbetter, John Webster, Mathew Haughton, Aaron E. Darling, Steven P. Djordjevic, Daniel R. Bogema, Toni A. Chapman
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Adaptation mechanisms of Alcanivorax facilitating its predominance in marine environments
Zhen Chen, Shizheng Xiang, Yao Lu, Qiliang Lai, Chunming Dong, Jianyang Li, Guizhen Li, Zongze Shao
Frontiers in Marine Science.2024;[Epub] CrossRef
Genomic Functional Analysis of Novel Radiation-Resistant Species of Knollia sp. nov. S7-12T from the North Slope of Mount Everest
Xinyue Wang, Yang Liu, Zhiyuan Chen, Kexin Wang, Guangxiu Liu, Tuo Chen, Binglin Zhang
Microorganisms.2024; 12(9): 1748. CrossRef
Massilia litorea sp. nov., Marinobacter salinisoli sp. nov. and Rhodobacter xanthinilyticus sp. nov., isolated from coastal environments
Banseok Lee, Donghoon Shin, Juseong Kim, Su-Kyoung Shin, Hana Yi, Min-gyung Baek
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Unveiling unique microbial nitrogen cycling and nitrification driver in coastal Antarctica
Ping Han, Xiufeng Tang, Hanna Koch, Xiyang Dong, Lijun Hou, Danhe Wang, Qian Zhao, Zhe Li, Min Liu, Sebastian Lücker, Guitao Shi
Nature Communications.2024;[Epub] CrossRef
Auxin production and plant growth promotion by Microbacterium albopurpureum sp. nov. from the rhizoplane of leafless Chiloschista parishii Seidenf. orchid
Elena A. Tsavkelova, Elena A. Volynchikova, Natalia V. Potekhina, Konstantin V. Lavrov, Alexander N. Avtukh
Frontiers in Plant Science.2024;[Epub] CrossRef
Paenibacillus suaedae sp. nov. and Paenibacillus violae sp. nov., isolated from the roots of Suaeda japonica Makino and Viola mandshurica W. Becker with plant growth-promoting potential
Inhyup Kim, Sunho Park, Yonghee Jung, Haejin Woo, Hyunji Lee, Subin Yook, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Vagococcus jeotgali sp. nov., isolated from cutlassfish jeotgal, a traditional Korean fermented seafood
Sung-Hong Joe, Ah-In Yang, Bora Kim, Hae-In Joe, Yeongjin Hong, Na-Ri Shin
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Sphingomonas rustica sp. nov. and Sphingomonas agrestis sp. nov., novel carotenoid-producing bacterial species isolated from farm soil
Hyunji Lee, Inhyup Kim, Sunho Park, Haejin Woo, Subin Yook, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Lapidilactobacillus salsurivasis sp. nov., Secundilactobacillus muriivasis sp. nov., and Streptococcus parasalivarius sp. nov., isolated from Traditional Chinese Pickle
Ting-Yu Wang, Chun Yan Li, Hao Wang, Chun Tao Gu
Current Microbiology.2024;[Epub] CrossRef
Unprecedented N 2 O production by nitrate-ammonifying Geobacteraceae with distinctive N 2 O isotopocule signatures
Zhenxing Xu, Shohei Hattori, Yoko Masuda, Sakae Toyoda, Keisuke Koba, Pei Yu, Naohiro Yoshida, Zong-Jun Du, Keishi Senoo, Derek R. Lovley, Daniel R Bond
mBio.2024;[Epub] CrossRef
Pseudomonas hefeiensis sp. nov., isolated from the rhizosphere of multiple cash crops in China
Kaiji Liao, Qiang Li, Jun-Zhou Li, Hai-Lei Wei
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Speluncibacter jeojiensis gen. nov. sp. nov., a novel bacterium of the order Mycobacteriales isolated from a cave and a proposal of Speluncibacteraceae fam. nov.
Soon Dong Lee, Hong-Lim Yang, Jong-Heon Han, In Seop Kim
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
A rare urinary tract infection of multidrug-resistant Chryseobacterium urinae sp. nov. isolated from a diabetic, non-catheterized patient
Agrima Bhatt, Sujata Pujari, Shailesh Mantri, Kiran Kirdat, Lucky Thakkar, Reshma Poojary, Sunil Kuyare, Kritika Patil, Amit Yadav
Archives of Microbiology.2024;[Epub] CrossRef
Roseihalotalea indica gen. nov., sp. nov., a halophilic Bacteroidetes from mesopelagic Southwest Indian Ocean with higher carbohydrate metabolic potential
Beihan Chen, Mingzhe Zhang, Dan Lin, Jianing Ye, Kai Tang
Antonie van Leeuwenhoek.2024;[Epub] CrossRef
Phytopathogenic Curtobacterium flaccumfaciens Strains Circulating on Leguminous Plants, Alternative Hosts and Weeds in Russia
Anna D. Tokmakova, Rashit I. Tarakanov, Anna A. Lukianova, Peter V. Evseev, Lyubov V. Dorofeeva, Alexander N. Ignatov, Fevzi S.-U. Dzhalilov, Sergei A. Subbotin, Konstantin A. Miroshnikov
Plants.2024; 13(5): 667. CrossRef
Genomic and functional insights of a mucin foraging Rhodopirellula halodulae sp. nov.
PK Sreya, Atham Hari Naga Papa Rao, Gandham Suresh, Chintalapati Sasikala, Chintalapati Venkata Ramana
Systematic and Applied Microbiology.2024; 47(4): 126523. CrossRef
Dyadobacter helix sp. nov. and Dyadobacter linearis sp. nov., from drinking water
Teresa Lucena, María J. Pujalte, David R. Arahal
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Preliminary comparative genomics analysis among Corynebacterium kroppenstedtii complex necessitates a reassessment of precise species associated with mastitis
Ying Huang, Ming-Hui Song, Shun-Guang Li, Hong- Yu Shen, Ping-Hua Qu, Dao-Feng Zhang
Journal of Applied Microbiology.2024;[Epub] CrossRef
Ruicaihuangia caeni gen. nov., sp. nov., a novel taxon within the family Microbacteriaceae isolated from sludge
Le Liu, Keke Geng, Yu Lv, Qi Zhang, Gang Chen, Dan Cheng, Jiahui Shao, Jian He, Qirong Shen
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Isolation and characterization of two new species, Hymenobacter mellowenesis sp. nov. and Hymenobacter aranciens sp. nov., from soil
Seonjae Kim, Sathiyaraj Srinivasan, Myung Kyum Kim
Archives of Microbiology.2024;[Epub] CrossRef
Characteristics of a lipase ArEstA with lytic activity against drug-resistant pathogen from a novel myxobacterium, Archangium lipolyticum sp. nov.
Yang Zhou, Haixin Chen, Hongxia Jiang, Qing Yao, Honghui Zhu
Frontiers in Microbiology.2024;[Epub] CrossRef
Lineage-specific evolution of Aquibium , a close relative of Mesorhizobium , during habitat adaptation
Minkyung Kim, Wonjae Kim, Yerim Park, Jaejoon Jung, Woojun Park, Arpita Bose
Applied and Environmental Microbiology.2024;[Epub] CrossRef
Speciation Features of Ferdinandcohnia quinoae sp. nov to Adapt to the Plant Host
Zaki Saati-Santamaría, José David Flores-Félix, José M. Igual, Encarna Velázquez, Paula García-Fraile, Eustoquio Martínez-Molina
Journal of Molecular Evolution.2024; 92(2): 169. CrossRef
Novel microbiota Mesosutterella faecium sp. nov. has a protective effect against inflammatory bowel disease
Seung Yeob Yu, Byeong Seob Oh, Seoung Woo Ryu, Jeong Eun Bak, Eun Seo Heo, Jeong Chan Moon, Jae-Ho Jeong, Ju Huck Lee
Frontiers in Microbiology.2024;[Epub] CrossRef
Isoptericola haloaureus sp. nov., a dimorphic actinobacterium isolated from mangrove sediments of southeast India, implicating biosaline agricultural significance through nitrogen fixation and salt tolerance genes
Munisamy Prathaban, Ragothaman Prathiviraj, Mythili Ravichandran, Sharmila Devi Natarajan, Murugesan Sobanaa, S. Hari Krishna Kumar, Varadharaju Chandrasekar, Joseph Selvin
Antonie van Leeuwenhoek.2024;[Epub] CrossRef
Isolation and Characterization of Paracoccus maritimus sp. nov., from Intertidal Sediment
Libo Yu, Guangxin Xu, Shiping Wei, Qiliang Lai, Zongze Shao
Current Microbiology.2024;[Epub] CrossRef
Gilvirhabdus luticola gen. nov., sp. nov., a mesophilic and halophilic bacterium isolated from tidal flat sediment
Jaincy N. Jayan, Hee-Su Kim, Sathiyaraj Srinivasan, Hyung-Seop Kim, Jae-Yon Yu, Sang-Seob Lee
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Leuconostoc koreense sp. nov., isolated from kimchi, a fermented vegetable
Min Ji Lee, Jeong Ui Yun, Sohee Nam, Mi-Ja Jung, Yeon Bee Kim, Yujin Kim, Jisu Lee, Dae Gyu Choi, Dae Seung Lee, Seong Woon Roh, Tae Woong Whon, Che Ok Jeon, Se Hee Lee
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Aerobic anoxygenic phototrophs play important roles in nutrient cycling within cyanobacterial Microcystis bloom microbiomes
Haiyuan Cai, Christopher J. McLimans, Helong Jiang, Feng Chen, Lee R. Krumholz, K. David Hambright
Microbiome.2024;[Epub] CrossRef
Arthrobacter horti sp. nov., isolated from mountain soil
Mingyeong Park, Jaisoo Kim
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Sphingomicrobium clamense sp. nov., Isolated from Sediment of Clam Island Beach in China
Xing Li, Lulu Mu, Yanfeng Zhang, Zimu Zhu, Yazhong Xiao, Zemin Fang
Current Microbiology.2024;[Epub] CrossRef
Pseudomonas fortuita sp. nov., isolated from the endosphere of a wild yam
Aurelien Carlier, Marine Beaumel, Sandra Moreau, Tessa Acar, Thibault Géry Sana, Margo Cnockaert, Peter Vandamme
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Azospirillum isscasi sp. nov., a bacterium isolated from rhizosphere soil of rice
Hui Wang, Haiyang Jin, Zhe Chen, Wenjun Li, Jing Ma, Tianlong Hu, Qi Liu, Yanhui Zhang, Xingwu Lin, Zubin Xie
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Genome Mining Analysis Uncovers the Previously Unknown Biosynthetic Capacity for Secondary Metabolites in Verrucomicrobia
Xue Di, Peng Li, Jingxuan Wang, Vincent Nowak, Shuai Zhi, Meiling Jin, Liwei Liu, Shan He
Marine Biotechnology.2024; 26(6): 1324. CrossRef
Metabolic and phylogenetic diversity in the phylum Nitrospinota revealed by comparative genome analyses
Linnea F M Kop, Hanna Koch, Mike S M Jetten, Holger Daims, Sebastian Lücker
ISME Communications.2024;[Epub] CrossRef
Key bacteria decomposing animal and plant detritus in deep sea revealed via long-term in situ incubation in different oceanic areas
Jianyang Li, Chunming Dong, Shizheng Xiang, Huiyang Wei, Qiliang Lai, Guangshan Wei, Linfeng Gong, Zhaobin Huang, Donghui Zhou, Guangyi Wang, Zongze Shao
ISME Communications.2024;[Epub] CrossRef
Xiashengella succiniciproducens gen. nov., sp. nov., a succinate-producing bacterium isolated from an anaerobic digestion tank in the family Marinilabiliaceae of the order Bacteroidales
Hao-Jie Huang, Xi Zhang, Xin-Wei Sun, Biao Chen, Xiu-Tong Li, Nan Zhou, Rashidin Abdugheni, Qiu-Yin Cheng, Tie-Jun Zhang, Yao Liu, Yong Jiang, Ye Deng, Shuang-Jiang Liu, Cheng-Ying Jiang
Archives of Microbiology.2024;[Epub] CrossRef
Comparative genome analysis of the genus Marivirga and proposal of two novel marine species: Marivirga arenosa sp. nov., and Marivirga salinae sp. nov.
Neak Muhammad, Forbes Avila, Song-Gun Kim
BMC Microbiology.2024;[Epub] CrossRef
Lacticaseibacillus pabuli sp. nov., isolated from fermented cattle feed
Hyorim Choi, Yiseul Kim, Seunghwan Kim, Soon-Wo Kwon, Daseul Lee, Byeong-Hak Han, Seung-Beom Hong, Hanako Naito, Tomomi Yamada, Moriyuki Hamada, Jun Heo
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Resolving the metabolism of monolignols and other lignin-related aromatic compounds in Xanthomonas citri
Damaris B. Martim, Anna J. V. C. Brilhante, Augusto R. Lima, Douglas A. A. Paixão, Joaquim Martins-Junior, Fernanda M. Kashiwagi, Lucia D. Wolf, Mariany S. Costa, Fabrícia F. Menezes, Rafaela Prata, Matheus C. Gazolla, Juliana A. Aricetti, Gabriela F. Per
Nature Communications.2024;[Epub] CrossRef
Pedobacter rhodius sp. nov. and Pedobacter punctiformis sp. nov., isolated from soil
Haejin Woo, Geeta Chhetri, Inhyup Kim, Yoonseop So, Sunho Park, Yonghee Jung, Taegun Seo
Antonie van Leeuwenhoek.2024;[Epub] CrossRef
A comparative genomic study of a hydrocarbon-degrading marine bacterial consortium
Jorge Rojas-Vargas, Eria A. Rebollar, Alejandro Sanchez-Flores, Liliana Pardo-López, Pankaj Kumar Arora
PLOS ONE.2024; 19(8): e0303363. CrossRef
Gemmobacter denitrificans sp. nov., a denitrifying bacterium, isolated from pond water for Litopenaeus vannamei
Mingxia Zhang, Yulian Zhang, Fan Yang, Qing Yao, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Janibacter alittae sp. nov., an actinobacterium isolated from the gut of marine sandworm (Alitta virens)
Bora Kim, Min Ok Jun, Ah-In Yang, Sung-Hong Joe, Hae-In Joe, Hojun Sung, Ki Hyun Kim, Hyun Jung Kim, Na-Ri Shin
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Sporosarcina jeotgali sp. nov., Sporosarcina oncorhynchi sp. nov., and Sporosarcina trichiuri sp. nov., Isolated from Jeotgal, a Traditional Korean Fermented Seafood
Ah-In Yang, Bora Kim, Sung-Hong Joe, Hae-In Joe, Hanna Choe, Ki Hyun Kim, Min Ok Jun, Na-Ri Shin
Journal of Microbiology.2024; 62(4): 285. CrossRef
Characterization of Bacillus velezensis TJS119 and its biocontrol potential against insect pathogens
Kook-Il Han, Young Ho Nam, Byung Su Hwang, Jeong Tae Kim, Jum Oc Jung, Eunsun Kim, Mi-Hwa Lee
Frontiers in Microbiology.2024;[Epub] CrossRef
Altererythrobacter litoralis sp. nov., a New Carotenoid-Producing Member of the Family Erythrobacteraceae, Isolated from a Tidal Flat Sediment
Yang Liu, Tao Pei, Juan Du, Mingxia Zhang, Honghui Zhu
Current Microbiology.2024;[Epub] CrossRef
Pengzhenrongella frigida sp. nov., isolated from a glacier
Qing Liu, Lei-Lei Yang, Yu-Hua Xin
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Isolation and identification of uric acid-dependent Aciduricibacillus chroicocephali gen. nov., sp. nov. from seagull feces and implications for hyperuricemia treatment
Wenxuan Liu, Fulong Nan, Fengjun Liu, Xiaoli Yang, Zonghui Li, Shasha Jiang, Xianjuan Zhang, Jun Li, Meng Yu, Yunyang Wang, Bin Wang, Vincent B. Young
mSphere.2024;[Epub] CrossRef
Ciceribacter sichuanensis sp. nov., a plant growth promoting rhizobacterium isolated from root nodules of soybean in Sichuan, China
Yanqin Zhang, Yuanxue Chen, Petri Penttinen, Xing Wang, Ying Quan, Licheng Wen, Miao Yang, Xiaoping Zhang, Qiang Chen, Lingzi Zhang, Junjie Zhang, Xiaoxia Zhang, Kaiwei Xu
Antonie van Leeuwenhoek.2024;[Epub] CrossRef
Clostridium lapidicellarium sp. nov. and Clostridium moutaii sp. nov., two species isolated from fermentation cellar-producing sauce-flavour Chinese baijiu
Fan Yang, Hui Wang, Liang-Qiang Chen, Nan Zhou, Jian-Jun Lu, Xiu-Xin Pu, Bo Wan, Li Wang, Shuang-Jiang Liu
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Paracoccus actinidiae sp.nov., a novel bacterium isolated from kiwi tree rhizosphere soil
Chenqi Xu, Han Peng, He Li, Xinran Xie, Siwei Chen, Junhao Dai, Hong Ren
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
The Type Strain of Bifidobacterium indicum Scardovi and Trovatelli 1969 (Approved Lists 1980) is ATCC 25912, not DSM 20214, and Rejection to Reclassify Bifidobacterium coryneforme as Bifidobacterium indicum
Cheng-Shan Jiang, Chun Yan Li, Chun Tao Gu
Current Microbiology.2024;[Epub] CrossRef
Actinomadura monticuli sp. nov., isolated from Darangshi Oreum (a volcanic cone), and the reclassification of Actinomadura glauciflava Lu et al. 2003 as a later heterotypic synonym of Actinomadura luteofluorescens (Shinobu 1962) Preobrazhensk
Soon Dong Lee, Hong Lim Yang, In Seop Kim
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Streptococcus taoyuanensis sp. nov., a Novel Species Isolated from a Patient with Bacteremia
Chien-Yu Lee, Chin-Kan Chan, Yi-Sheng Chen, Yun-Shien Lee, Shih-Ting Lin, Yu-Chung Chang, Hui-Chung Wu, Jia-rong Zhang, Hong-yu Chen, Li-Ting Wang
Current Microbiology.2024;[Epub] CrossRef
Difference in gut microbial dysbiotic patterns between body-first and brain-first Parkinson's disease
Don Gueu Park, Woorim Kang, In-Ja Shin, Mauricio Chalita, Hyun-Seok Oh, Dong-Wook Hyun, Hyun Kim, Jongsik Chun, Young-Sil An, Eun Jeong Lee, Jung Han Yoon
Neurobiology of Disease.2024; 201: 106655. CrossRef
Acidithiobacillus acidisediminis sp. nov., an acidophilic sulphur-oxidizing chemolithotroph isolated from acid mine drainage sediment
Xiu-Tong Li, Zong-Lin Liang, Ye Huang, Zhen Jiang, Zhen-Ni Yang, Nan Zhou, Ying Liu, Shuang-Jiang Liu, Cheng-Ying Jiang
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Sphingomonas Immobilis sp. nov., and Sphingomonas natans sp. nov. bacteria isolated from soil
Inyoung Choi, Sathiyaraj Srinivasan, Myung Kyum Kim
Archives of Microbiology.2024;[Epub] CrossRef
Roseateles agri sp. nov., a New Species Isolated from Fresh Soil in Uiwang, South Korea
Yelim You, Jaisoo Kim
Diversity.2024; 16(5): 279. CrossRef
Description of Roseibium sediminicola sp. nov. Isolated from Sediment of a Tidal Flat on the Yellow Sea Coast
Soyeon Ahn, Veeraya Weerawongwiwat, Yunjeong Lee, David Hyung-Sun Choi, Jong-Hwa Kim, Jung-Hoon Yoon, Jung-Sook Lee, Ampaitip Sukhoom, Wonyong Kim
Current Microbiology.2024;[Epub] CrossRef
Chemolithoautotrophic diazotrophs dominate dark nitrogen fixation in mangrove sediments
Shasha Wang, Lijing Jiang, Zhuoming Zhao, Zhen Chen, Jun Wang, Karine Alain, Liang Cui, Yangsheng Zhong, Yongyi Peng, Qiliang Lai, Xiyang Dong, Zongze Shao
The ISME Journal.2024;[Epub] CrossRef
Fontisubflavum oceani gen. nov., sp. nov., isolated from the deep-sea cold seep water of South China Sea
Xiu-dan Xu, Dan-dan Zhou, Bin-zhe Zhang, Jian Zhang
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Paenibacillus glufosinatiresistens sp. nov., a glufosinate-resistant bacterium isolated from sludge
Yan Wu, Yuwen Yang, Minglai Wan, Le Chen, Ye Yuan, Jian He, Baolong Zhang
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Erythrobacter oryzae sp. nov., isolated from rice paddy soil
Hyo-Jin Lee, Ji-Soo Hwang, Eun-kyung Lee, Kyung-Sook Whang
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
SeqCode facilitates naming of South African rhizobia left in limbo
Melandré van Lill, Stephanus N. Venter, Esther K. Muema, Marike Palmer, Wai Y. Chan, Chrizelle W. Beukes, Emma T. Steenkamp
Systematic and Applied Microbiology.2024; 47(2-3): 126504. CrossRef
A Novel Strain Burkholderia theae GS2Y Exhibits Strong Biocontrol Potential Against Fungal Diseases in Tea Plants (Camellia sinensis)
Yijie Dong, Xing Wang, Guang-Da Feng, Qing Yao, Honghui Zhu
Cells.2024; 13(21): 1768. CrossRef
Clostridium omnivorum sp. nov., isolated from anoxic soil under the treatment of reductive soil disinfestation
Atsuko Ueki, Akio Tonouchi, Nobuo Kaku, Sachi Honma, Katsuji Ueki
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Alkalimonas mucilaginosa sp. nov. and Alkalimonas cellulosilytica sp. nov. isolated from alkaline Lonar lake, India
Sonia Thite, Devika Godbole, Mahima Debnath, Agrima Bhatt, Amit Yadav, Tushar Lodha, Neetha Joseph, Kiran Kirdat, Dibyajyoti Boruah, Roohani Sharma, Amaraja Joshi
Antonie van Leeuwenhoek.2024;[Epub] CrossRef
Genome-based taxonomic classification of the genus Sulfitobacter along with the proposal of a new genus Parasulfitobacter gen. nov. and exploring the gene clusters associated with sulfur oxidation
Xiaokun Xu, Mengdan He, Qingjie Xue, Xiuzhen Li, Ang Liu
BMC Genomics.2024;[Epub] CrossRef
Aurantiacibacter flavus sp. nov. and Aurantiacibacter gilvus sp. nov., isolated from the mudflat of Suaeda japonica colonies
Sunho Park, Inhyup Kim, Haejin Woo, Hyunji Lee, Subin Yook, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Ochrobactrum chromiisoli sp. nov., Isolated from Chromium-Contaminated Soil
Yi Yang, Zhe Xu, Li Yang, Meng-yao Hu, Guang-yang Jiang, Jia Chen, Yi-chen Yang, Yongqiang Tian
Current Microbiology.2024;[Epub] CrossRef
Thiosulfate oxidation and autotrophy potential by marine prevalent heterotrophic bacteria of genus Marinobacter
Fei Xu, Xiang Zeng, Yadong Gong, Zongze Shao
Acta Oceanologica Sinica.2024; 43(8): 89. CrossRef
Lacticaseibacillus parahuelsenbergensis sp. nov., Lacticaseibacillus styriensis sp. nov. and Lacticaseibacillus zeae subsp. silagei subsp. nov., isolated from different grass and corn silage
Monika Grabner F., Monika Grabner H., Hermine Schein, Andrea Schrank, Manuela Töglhofer, Elisabeth Weidenholzer, Christian Rückert-Reed, Tobias Busche, Marlene Buchebner-Jance
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Draft genome sequence of 'Candidatus Phytoplasma asteris,’ strain SW86 associated with sandal spike disease (SSD)
Kiran Kirdat, Bhavesh Tiwarekar, K. N. Manjula, S. Padma, Shivaji Sathe, R. Sundararaj, Amit Yadav
3 Biotech.2024;[Epub] CrossRef
Cold-adapted Exiguobacterium sibiricum K1 as a potential bioinoculant in cold regions: Physiological and genomic elucidation of biocontrol and plant growth promotion
Sareeka Kumari, Anil Kumar, Ayush Lepcha, Rakshak Kumar
Gene.2024; 916: 148439. CrossRef
EcoGenoRisk: Developing a computational ecological risk assessment tool for synthetic biology
Anna Ulanova, Cresten Mansfeldt
Environmental Pollution.2024; 346: 123647. CrossRef
Description of Aliirhizobium terrae sp. nov., A Plant Growth-Promoting Bacterium Isolated from a Maize-Rice Rotation Agriculture Field
Shih-Yao Lin, Tzu-Yu Lin, Asif Hameed, Chia-Fang Tsai, Chiu-Chung Young
Current Microbiology.2024;[Epub] CrossRef
Novel oceanic cyanobacterium isolated from Bangaram island with profound acid neutralizing ability is proposed as Leptolyngbya iicbica sp. nov. strain LK
Subhajeet Dutta, Shreya Kothari, Deeksha Singh, Samrat Ghosh, Aditya Narayan Sarangi, Smruti Sanjita Behera, Satish Prajapati, Prasanta Kumar Sinha, Asharani Prusty, Sucheta Tripathy
Molecular Phylogenetics and Evolution.2024; 197: 108092. CrossRef
Sulfide Toxicity as Key Control on Anaerobic Oxidation of Methane in Eutrophic Coastal Sediments
Paula Dalcin Martins, João P. R. C. de Monlevad, Maider J. Echeveste Medrano, Wytze Klaas Lenstra, Anna Julia Wallenius, Martijn Hermans, Caroline P. Slomp, Cornelia Ulrike Welte, Mike S. M. Jetten, Niels A. G. M. van Helmond
Environmental Science & Technology.2024; 58(26): 11421. CrossRef
Phylogeny and genomic analysis of Shewanella cutis sp. nov., isolated from freshwater pufferfish
Lipika Das, Ritu Rani Archana Kujur, Tanmoy Debnath, Subrata K. Das
Folia Microbiologica.2024; 69(4): 723. CrossRef
Aequorivita flava sp. nov., isolated from deep-sea sediments
Xiangwei Chen, Jinmei Xia, Xiaoteng Fu, Qiliang Lai, Jianning Wang, Yaping Du, Xiupian Liu, Guangyu Li, Xixiang Tang, Zongze Shao
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Paraflavitalea pollutisoli sp. nov., Pollutibacter soli gen. nov. sp. nov., Polluticoccus soli gen. nov. sp. nov., and Terrimonas pollutisoli sp. nov., four new members of the family Chitinophagaceae from polluted soil
Ze-Shen Liu, Xiao-Kang Wang, Ke-Huan Wang, Mei-Ling Yang, De-Feng Li, Shuang-Jiang Liu
Systematic and Applied Microbiology.2024; 47(2-3): 126503. CrossRef
Sinomonas terricola sp. nov., a plant-beneficial bacterium isolated from litchi rhizosphere soil in Guangdong, China
Jiaxin Wan, Yang Zhou, Hui Sun, Huaping Li, Qing Yao, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Genetic and phenotypic diversity of Flavobacterium psychrophilum isolates from Czech salmonid fish farms
Vera Vaibarova, Stanislava Kralova, Miroslava Palikova, Jana Schwarzerova, Julie Nejezchlebova, Darina Cejkova, Alois Cizek
BMC Microbiology.2024;[Epub] CrossRef
Citrobacter enshiensis sp. nov., isolated from seleniferous soil
Sasa Zhang, Kui Li, Jing Peng, Haoyang Wang, Jiayin Sun, Yanbin Guo
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Distinct genome trichotomy in members of Hapalosiphonaceae is guided by habitat adaptation with Mastigocladus laminosus UU774 as a case study
Aribam Geeta, Mayuri Mukherjee, Bornita Das, Subhajeet Dutta, Asharani Prusty, Samrat Ghosh, Anashuya Biswas Raha, Mousumi Poddar Sarkar, Sucheta Tripathy
Algal Research.2024; 82: 103603. CrossRef
Microbacterium aquilitoris sp. nov. and Microbacterium gwkjiense sp. nov., isolated from beach
Soon Dong Lee, Hong Lim Yang, Ji-Sun Kim, In Seop Kim
Archives of Microbiology.2024;[Epub] CrossRef
Microvirga sesbaniae sp. nov. and Microvirga yunnanensis sp. nov., Pink-Pigmented Bacteria Isolated from Root Nodules of Sesbania cannabina (Retz.) Poir.
Nan Shi, Teng He, Huifang Qin, Ziye Wang, Shenghao You, Entao Wang, Guoli Hu, Fang Wang, Miao Yu, Xiaoyun Liu, Zhenyu Liu
Microorganisms.2024; 12(8): 1558. CrossRef
Microbacterium horticulturae sp. nov., a novel actinobacterium isolated from flowerpot soil
Hyorim Choi, Yunhee Choi, Seunghwan Kim, Yiseul Kim, Hanako Naito, Tomomi Yamada, Moriyuki Hamada, NamJung Kim, Yonghoon Lee, Jun Heo
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Comparative genomics of the genus Halioglobus reveals the genetic basis for the reclassification of Halioglobus pacificus as Parahalioglobus pacificus gen. nov. comb. nov
Jake Adolf V. Montecillo
International Microbiology.2024; 27(6): 1831. CrossRef
Paraburkholderia largidicola sp. nov., a gut symbiont of the bordered plant bug Physopelta gutta
Reona Yashima, Yuan Terata, Kaoru Sakamoto, Miho Watanabe, Kazutaka Takeshita
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Sphingomonas longa sp. nov., Sphingomonas mollis sp. nov. and Sphingomonas aurea sp. nov.: three novel Sphingomonas species isolated from soil
Eo Jin Kim, Soo Hyun Maeng, Myung Kyum Kim
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Genomics of the Thermophilic Bacterium Thermosulfidibacter takaii Reveals Novel Lineage of Deep-Branching Bacterial Phylum
Jake Adolf V. Montecillo
Indian Journal of Microbiology.2024; 64(2): 762. CrossRef
Hyalangiumruber sp. nov, characterization of a novel myxobacterium strain s54d21 and their secondary metabolites
Yi Zang, Xianjiao Zhang, Zhe Wang, Qingyi Tong, Yang Zhou, Qing Yao, Honghui Zhu
Frontiers in Microbiology.2024;[Epub] CrossRef
Achromobacter seleniivolatilans sp. nov. and Buttiauxella selenatireducens sp. nov., isolated from the rhizosphere of selenium hyperaccumulator Cardamine hupingshanesis
Sasa Zhang, Yi Liu, Hao Wang, Zhongnan Xu, Jing Peng, Qiaolin Xu, Kui Li, Haoyang Wang, Yanbin Guo
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Draft Genome Sequence Analyses of Two Novel Marinobacter suadae sp. nov. and Wenyingzhuangia gilva sp. nov. Isolated from the Root of Suaeda japonica Makino
Sunho Park, Inhyup Kim, Geeta Chhetri, Yonghee Jung, Haejin Woo, Taegun Seo
Life.2024; 14(3): 296. CrossRef
Unveiling three novel actinobacterial species (Streptomyces cavernicola sp. nov., Streptomyces solicavernae sp. nov. and Streptomyces luteolus sp. nov.) in soil samples in Phu Pha Phet Cave, Thailand
Nitcha Chamroensaksri, Supattra Muangham, Chanwit Suriyachadkun, Worawich Phornsiricharoenphant, Wongsakorn Phongsopitanun, Satinee Suetrong, Somboon Tanasupawat
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Cellulomonas alba sp. nov. and Cellulomonas edaphi sp. nov., isolated from wetland soils
Sunho Park, Inhyup Kim, Geeta Chhetri, Yonghee Jung, Haejin Woo, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Microbacterium algihabitans sp. nov., Microbacterium phycohabitans sp. nov., and Microbacterium galbum sp. nov., isolated from dried beach seaweeds
Soon Dong Lee, Hong Lim Yang, In Seop Kim
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Bifidobacterium apicola sp. nov., isolated from the gut of honeybee (Apis mellifera)
Ting-Yu Wang, Hao Wang, Chun Tao Gu
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Polaribacter ponticola sp. nov., isolated from seawater, reclassification of Polaribacter undariae as a later heterotypic synonym of Polaribacter sejongensis, and emended description of Polaribacter sejongensis Kim et al. 2013
Ju Hye Baek, Mahrukh Butt, Dong Min Han, Jeong Min Kim, Seohui Choi, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Description of Mycolicibacterium arenosum sp. nov. Isolated from Coastal Sand on the Yellow Sea Coast
Jiseon Jeong, Soyeon Ahn, Thoi Cong Truong, Jong-Hwa Kim, Veeraya Weerawongwiwat, Jung-Sook Lee, Jung-Hoon Yoon, Ampaitip Sukhoom, Wonyong Kim
Current Microbiology.2024;[Epub] CrossRef
Genome analysis deciphered Chryseobacterium indicum is a distinct species associated with freshwater pufferfish
Manish Prakash Victor, Ritu Rani Archana Kujur, Lipika Das, Subrata K. Das
Infection, Genetics and Evolution.2024; 118: 105561. CrossRef
Stable-isotope probing combined with amplicon sequencing and metagenomics identifies key bacterial benzene degraders under microaerobic conditions
András Táncsics, Anna Bedics, Sinchan Banerjee, André Soares, Erzsébet Baka, Alexander J. Probst, Balázs Kriszt
Biologia Futura.2024; 75(3): 301. CrossRef
Streptococcus taonis sp. nov., a novel bacterial species isolated from a blood culture of a patient
Chien-Yu Lee, Chin-Kan Chan, Momoko Chida, Mika Miyashita, Yun-Shien Lee, Hui-Chung Wu, Yu-Chung Chang, Wen-Ting Lin, Yi-Sheng Chen
Archives of Microbiology.2024;[Epub] CrossRef
Shewanella phaeophyticola sp. nov. and Vibrio algarum sp. nov., isolated from marine brown algae
Mahrukh Butt, Jaejoon Jung, Jeong Min Kim, Hülya Bayburt, Dong Min Han, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Two Novel Bacterial Species, Rhodanobacter lycopersici sp. nov. and Rhodanobacter geophilus sp. nov., Isolated from the Rhizosphere of Solanum lycopersicum with Plant Growth-Promoting Traits
Haejin Woo, Inhyup Kim, Geeta Chhetri, Sunho Park, Hyunji Lee, Subin Yook, Taegun Seo
Microorganisms.2024; 12(11): 2227. CrossRef
Roseateles caseinilyticus sp. nov. and Roseateles cellulosilyticus sp. nov., isolated from rice paddy field soil
Yoonseop So, Geeta Chhetri, Inhyup Kim, Sunho Park, Yonghee Jung, Taegun Seo
Antonie van Leeuwenhoek.2024;[Epub] CrossRef
A Multilocus Sequence Typing Scheme for Rapid Identification of Xanthomonas citri Based on Whole-Genome Sequencing Data
Efenaide B. Okoh, Michael Payne, Ruiting Lan, Markus Riegler, Toni A. Chapman, Daniel R. Bogema
Phytopathology®.2024; 114(7): 1480. CrossRef
Taxonomic characterization of Sphaerotilus microaerophilus sp. nov., a sheath-forming microaerophilic bacterium of activated sludge origin
Shiori Narihara, Shun Chida, Naoki Matsunaga, Ryosuke Akimoto, Mizuki Akimoto, Aoi Hagio, Tomomi Mori, Tadashi Nittami, Michio Sato, Sehui Mun, Hyeonjin Kang, Ji Hwan Back, Minoru Takeda
Archives of Microbiology.2024;[Epub] CrossRef
Dietary quality and the gut microbiome in early-stage Parkinson’s disease patients
Hyun Jeong Yoon, Woorim Kang, Sungyang Jo, Yun Su Hwang, Je Hee Lee, Sun Ju Chung, Yoo Kyoung Park
Nutritional Neuroscience.2024; 27(7): 761. CrossRef
Shewanella youngdeokensis sp. nov. Isolated from Marine Sediment and Sea Water of East Sea in Republic of Korea
Y.-S. Lee, H.-R. Jeong, E.-J. Hwang, M. P. Patil, S. S. Choi, Y. B. Seo, G.-D. Kim
Microbiology.2024; 93(6): 737. CrossRef
Methylomonas rivi sp. nov., Methylomonas rosea sp. nov., Methylomonas aurea sp. nov. and Methylomonas subterranea sp. nov., type I methane-oxidizing bacteria isolated from a freshwater creek and the deep terrestrial subsurface
Christopher A. Abin, Christopher T. Garner, Krithivasan Sankaranarayanan, Reid A. Sindelar, Kyrah F. Kotary, Rosa M. Garner, Samantha C. Barclay, Haiyuan Cai, Paul A. Lawson, Lee R. Krumholz
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Lysobacter stagni sp. nov. and Limnohabitans lacus sp. nov., isolated from a pond
Yonghee Jung, Geeta Chhetri, Inhyup Kim, Yoonseop So, Sunho Park, Haejin Woo, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
EzBioCloud: a genome-driven database and platform for microbiome identification and discovery
Mauricio Chalita, Yeong Ouk Kim, Sein Park, Hyun-Seok Oh, Jae Hyoung Cho, Jeongsup Moon, Nuga Baek, Changsik Moon, Kihyun Lee, Junwon Yang, Gi Gyun Nam, Yeonjae Jung, Seong-In Na, Michael James Bailey, Jongsik Chun
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Description and genomic characterization of Cohnella caldifontis sp. nov., isolated from hot springs in Yunnan province, south-west China
Ming-Xian Xiang, Cui-Ping Miao, Dian-Yan Zhang, Juan Wang, Yi-Qing Li, Min Yin, ShuKun Tang
Antonie van Leeuwenhoek.2024;[Epub] CrossRef
Chitiniphilus purpureus sp. nov., a novel chitin-degrading bacterium isolated from crawfish pond sediment
Kaiyang Li, Xiong Luo, Rongrong Fan, Zhuoran Ding, Shixue Zheng, Zhengjun Chen
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Phylogenomic analysis of metagenome-assembled genomes indicates new taxa in the order Spirochaetales and proposal of Thalassospirochaeta sargassi gen. nov. sp. nov. from seaweeds
Kohli Pragya, Pannikurungottu Sreya, Lakshmanan Vighnesh, Dhurka Mahima, Mallick Sushmita, Chintalapati Sasikala, Chintalapati Venkata Ramana
Systematic and Applied Microbiology.2024; 47(2-3): 126502. CrossRef
Update on the proposed minimal standards for the use of genome data for the taxonomy of prokaryotes
Raúl Riesco, Martha E. Trujillo
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Description of Fuscovulum ytuae sp. nov, a facultative autotroph isolated from the intertidalite of Yangma island, China
Bin-zhe Zhang, Xiu-dan Xu, Dan-dan Zhou, Xue-Peng Li, Xu-dong Jiao, Jian Zhang
Antonie van Leeuwenhoek.2024;[Epub] CrossRef
Phylogenomic analysis uncovers an unexpected capacity for the biosynthesis of secondary metabolites in Pseudoalteromonas
Jingxuan Wang, Peng Li, Xue Di, Hongmei Lu, Huamao Wei, Shuai Zhi, David P. Fewer, Shan He, Liwei Liu
European Journal of Medicinal Chemistry.2024; 279: 116840. CrossRef
Roseateles subflavus sp. nov. and Roseateles aquae sp. nov., isolated from artificial pond water and Roseateles violae sp. nov., isolated from a Viola mandshurica root
Haejin Woo, Geeta Chhetri, Inhyup Kim, Yoonseop So, Sunho Park, Yonghee Jung, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Comamonas endophytica sp. nov., a novel indole acetic acid producing endophyte isolated from bamboo in China
Jinjun Yue, Fu Yang, Youtie Xiao, Seqiao Lin, Zhengping He, Siyu Wang, Jiayi Zhao, Jinling Yuan, Lubin Li, Lei Liu
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Genome-Based Classification of Pedobacter albus sp. nov. and Pedobacter flavus sp. nov. Isolated from Soil
Nhan Le Thi Tuyet, Jaisoo Kim
Diversity.2024; 16(5): 292. CrossRef
Sphingobacterium oryzagri sp. nov., isolated from rice paddy soil
Seunghwan Kim, Jun Heo, Hyorim Choi, Daseul Lee, Soon-Wo Kwon, Yiseul Kim
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Paracoccus benzoatiresistens sp. nov., a benzoate resistance and selenite reduction bacterium isolated from wetland
Weidong Mu, Haoran Liu, Bai Guo, Kaiyue Wang, Jinhua Hu, Jianjun Song, Xiuyun Li, Shuzhen Wei, Aijv Liu, Hongliang Liu
Antonie van Leeuwenhoek.2024;[Epub] CrossRef
Oceanimonas pelagia sp. nov., a novel biosurfactant-producing and plastic-degrading potential bacterium isolated from marine coastal sediment
Hsiao-Tsu Yang, Yi-Hsuan Huang, Ying-Ning Ho
Antonie van Leeuwenhoek.2024;[Epub] CrossRef
Aquificae overcomes competition by archaeal thermophiles, and crowding by bacterial mesophiles, to dominate the boiling vent-water of a Trans-Himalayan sulfur-borax spring
Nibendu Mondal, Subhajit Dutta, Sumit Chatterjee, Jagannath Sarkar, Mahamadul Mondal, Chayan Roy, Ranadhir Chakraborty, Wriddhiman Ghosh, Marcos Pileggi
PLOS ONE.2024; 19(10): e0310595. CrossRef
Simplicispira sedimenti sp. nov., isolated from a sediment of drainage ditch in winery
Xing Chen, Yuan-Dong Li, Xiu-Ming Liu, Li Gao, Xing-Kui Zhou, Li-Min Dong, Gang Du, Neeli Habib, Wen-Jun Li, Yan-Qing Duan
Antonie van Leeuwenhoek.2024;[Epub] CrossRef
Lacticaseibacillus jixiensis sp. nov., Isolated from Traditional Chinese Pickle
Si-Tong Song, Chun Yan Li, Chun Tao Gu
Current Microbiology.2024;[Epub] CrossRef
Crenobacter oryzisoli sp. nov., a novel phosphate-solubilizing bacterium isolated from the paddy soil
Shu-Qun Zhang, Cheng-Jie Xie, Ling Yao, Christopher Rensing, Hao Lin, Guo-Hong Liu, Shun-Gui Zhou
Archives of Microbiology.2024;[Epub] CrossRef
Flavobacterium capsici sp. nov., isolated from the rhizospheric soils of bell pepper (Capsicum annuum L.)
Dong Hyun Cho, Yuxin Peng, Zalfa Humaira, Yu Lim Park, Hyun Jung Kim, Rae-Dong Jeong, Cha Young Kim, Jiyoung Lee
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Blastococcus montanus sp. nov., a multi-stress-resistant and bacteriostatic-producing bacterium isolated from the Flaming Mountain, Xinjiang,China
Kexin Wang, Yang Liu, Xiaowen Cui, Tuo Chen, Guangxiu Liu, Wei Zhang, Zhiyong Han, Gaosen Zhang
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Phylogenomic evaluation of Mangrovimicrobium sediminis gen. nov. sp. nov., the first nitrogen fixing member of the family Halieaceae adapted to mangrove habitat and reclassification of Halioglobus pacificus to Pseudohaliglobus pacificus comb. nov.
Pravin Kumar, Ashish Verma, Pooja Yadav, Joyasree Das, Lalit Kumar, Srinivasan Krishnamurthi
Science of The Total Environment.2024; 933: 172995. CrossRef
Arcobacteraceae are ubiquitous mixotrophic bacteria playing important roles in carbon, nitrogen, and sulfur cycling in global oceans
Jianyang Li, Shizheng Xiang, Yufei Li, Ruolin Cheng, Qiliang Lai, Liping Wang, Guizhen Li, Chunming Dong, Zongze Shao, Thomas J. Sharpton
mSystems.2024;[Epub] CrossRef
Niabella digestorum sp. nov., a High Cell-Surface Hydrophobic Bacterium Isolated from Waste Digestion System
Ling Zhang, Chuansheng Geng, Xingjuan Chen, Letian Chen, Tongchu Deng, Meiying Xu
Current Microbiology.2024;[Epub] CrossRef
Safety assessment, whole genome sequence, and metabolome analysis of Streptococcus thermophilus CICC 20372 for bone cement fermentation
Rongshan Li, Yangfan Hu, Yang Xu, Jinlong Zhou, Yunfang Li, Qing Liu, Bo Yu
Archives of Microbiology.2024;[Epub] CrossRef
Methylocystis suflitae sp. nov., a novel type II methanotrophic bacterium isolated from landfill cover soil
Christopher T. Garner, Krithivasan Sankaranarayanan, Christopher A. Abin, Rosa M. Garner, Haiyuan Cai, Paul A. Lawson, Lee R. Krumholz
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Polysaccharide degradation in Cellvibrionaceae: Genomic insights of the novel chitin-degrading marine bacterium, strain KSP-S5-2, and its chitinolytic activity
Nyok-Sean Lau, Go Furusawa
Science of The Total Environment.2024; 912: 169134. CrossRef
Nitrogen source influences the interactions of comammox bacteria with aerobic nitrifiers
Katherine Jeanne Vilardi, Juliet Johnston, Zihan Dai, Irmarie Cotto, Erin Tuttle, Ariana Patterson, Aron Stubbins, Kelsey J. Pieper, Ameet J. Pinto, Erik F. Y. Hom
Microbiology Spectrum.2024;[Epub] CrossRef
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Pallavi Sharma, Girija Kaushal, Shruti Sinai Borker, Ayush Lepcha, Anil Kumar, Rakshak Kumar
Journal of Plant Growth Regulation.2024;[Epub] CrossRef
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Hyo-Jin Lee, Kyung-Sook Whang
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Pseudoalteromonas simplex sp. nov. Isolated from the Skin of Bandtail Puffer Fish (Sphoeroides spengleri)
Hannah K. Mattsson, Mayanne A. M. de Freitas, Gustavo P. R. de Azevedo, Vinicius Salazar, Verônica V. Vieira, Diogo A. Tschoeke, Cristiane C. Thompson, Fabiano L. Thompson
Current Microbiology.2024;[Epub] CrossRef
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Qing Liu, Yu-Hua Xin
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Roseobacter fucihabitans sp. nov., isolated from the brown alga Fucus spiralis
Sarah Hahnke, Martine Berger, Andrea Schlingloff, Isha Athale, Jacqueline Wolf, Meina Neumann-Schaal, Adenike Adenaya, Anja Poehlein, Rolf Daniel, Jörn Petersen, Thorsten Brinkhoff
International Journal of Systematic and Evolutionary Microbiology .2024;[Epub] CrossRef
Complete genome sequence of a novel Prescottella sp. R16 isolate from deep-sea sediments in the western Pacific
Lingqi Ma, Yuqi Bai, Weili Wang, Shengxiang Pei, Gaiyun Zhang
Frontiers in Genetics.2024;[Epub] CrossRef
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Gissel García, Josanne Soto, Antonio Díaz, Jesús Barreto, Carmen Soto, Ana Beatriz Pérez, Suselys Boffill, Raúl De Jesús Cano
Microorganisms.2024; 12(11): 2299. CrossRef
Ureibacillus aquaedulcis sp. nov., isolated from freshwater well and reclassification of Lysinibacillus yapensis and Lysinibacillus antri as Ureibacillus yapensis comb. nov. and Ureibacillus antri comb. nov.
Amit Yadav, Ruchi Teware, Agrima Bhatt, Yash Bhavsar, Akanksha Maurya, Vipool Thorat, Venkata Ramana Vemuluri, Kiran Kirdat
Archives of Microbiology.2024;[Epub] CrossRef
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Xinzhao Tong, Danli Luo, Marcus H. Y. Leung, Justin Y. Y. Lee, Zhiyong Shen, Wengyao Jiang, Christopher E. Mason, Patrick K. H. Lee
Microbiome.2024;[Epub] CrossRef
Sabulicella glaciei sp. nov., Isolated from Glacier, and Reclassification of Roseomonas rubea, Roseomonas ponticola and Roseomonas oleicola as Neoroseomonas rubea comb. nov., Falsiroseomonas ponticola comb. nov. and Falsiroseomonas oleicola comb. nov
Qing Liu, Yu-Hua Xin
Current Microbiology.2024;[Epub] CrossRef
A functionally augmented carbohydrate utilization locus from herbivore gut microbiota fueled by dietary β-glucans
Fernanda Mandelli, Marcele Pandeló Martins, Mariana Chinaglia, Evandro Antonio de Lima, Mariana Abrahão Bueno Morais, Tatiani Brenelli Lima, Lucélia Cabral, Renan Augusto Siqueira Pirolla, Felipe Jun Fuzita, Douglas Antônio Alvaredo Paixão, Maxuel de Oliv
npj Biofilms and Microbiomes.2024;[Epub] CrossRef
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Changqing Liu, Rob A. Schmitz, Arjan Pol, Carmen Hogendoorn, Daniël Verhagen, Stijn H. Peeters, Theo A. van Alen, Geert Cremers, Rob A. Mesman, Huub J. M. Op den Camp
Environmental Microbiology.2024;[Epub] CrossRef
Fodinisporobacter ferrooxydans gen. nov., sp. nov.—A Spore-Forming Ferrous-Oxidizing Bacterium Isolated from a Polymetallic Mine
Zhen Jiang, Xiutong Li, Zonglin Liang, Zebao Tan, Nan Zhou, Ying Liu, Zhenghua Liu, Huaqun Yin, Kun Luo, Supawadee Ingsriswang, Shuangjiang Liu, Chengying Jiang
Microorganisms.2024; 12(5): 853. CrossRef
Massilia agrisoli sp. nov., isolated from rhizospheric soil of banana
Md. Amdadul Huq, Juncai Ma, Sathiyaraj Srinivasan, Md. Anowar Khasru Parvez, M. Mizanur Rahman, Masoumeh Naserkheil, Md. Abuhena, Pulak Maitra, Fahadul Islam, Kihong NAM, Jong-Hyun Park, Shahina Akter
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Tamlana laminarinivorans sp. nov. and Tamlana sargassicola sp. nov., two novel species isolated from Sargassum, show genomic and physiological adaptations for a Sargassum-associated lifestyle
Jin Li, Yumei Liang, Zhixiao He, Lu An, Yongjin Liu, Mingqi Zhong, Zhong Hu
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Ecophysiological and Genomic Characterization of the Freshwater Complete Ammonia OxidizerNitrospirasp. Strain BO4
Sabita Ghimire-Kafle, Matt E. Weaver, Annette Bollmann, Jennifer B. Glass
Applied and Environmental Microbiology.2023;[Epub] CrossRef
Bacteroides faecium sp. nov. isolated from human faeces
Juseok Kim, Hye Seon Song, Joon Yong Kim, Tae Woong Whon, Won-Hyong Chung, Young-Do Nam, Yoon-E Choi, Seong Woon Roh
International Journal of Systematic and Evolutionary Microbiology.2023;[Epub] CrossRef
A minireview on the bioinformatics analysis of mobile gene elements in microbiome research
Jana Schwarzerova, Anastasiya Labanava, Ivan Rychlik, Margaret Varga, Darina Cejkova
Frontiers in Bacteriology.2023;[Epub] CrossRef
Curtanaerobium respiraculi gen. nov., sp. nov., a novel anaerobic bacterium isolated from human bronchoalveolar lavage fluid
Yifan Sun, Likun Wang, Dexing Han, Jianjie Li, Yuejiao Liu, Yafang Tan, Zhiyuan Pan, Ruifu Yang, Pinghua Qu, Ziping Wang, Yujing Bi
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Faecalibacterium hominis Liu et al. 2023 is a later heterotypic synonym of Faecalibacterium duncaniae Sakamoto et al. 2022
Mitsuo Sakamoto, Naomi Sakurai, Hiroki Tanno, Takao Iino, Moriya Ohkuma, Akihito Endo
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Trichlorobacter ammonificans, a dedicated acetate-dependent ammonifier with a novel module for dissimilatory nitrate reduction to ammonia
Dimitry Y Sorokin, Tamara V Tikhonova, Hanna Koch, Eveline M van den Berg, Renske S Hinderks, Martin Pabst, Natalia I Dergousova, Anastasia Y Soloveva, Gijs J Kuenen, Vladimir O Popov, Mark C M van Loosdrecht, Sebastian Lücker
The ISME Journal.2023; 17(10): 1639. CrossRef
Limobrevibacterium gyesilva gen. nov., sp. nov., Isolated from Forest Soil
Nhan Le Thi Tuyet, Jaisoo Kim
Diversity.2023; 15(5): 684. CrossRef
Microbacterium tenebrionis sp. nov. and Microbacterium allomyrinae sp. nov., isolated from larvae of Tenebrio molitor L. and Allomyrina dichotoma, respectively
Soon Dong Lee, In Seop Kim
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Roseateles albus sp. nov., Roseateles koreensis sp. nov. and Janthinobacterium fluminis sp. nov., isolated from freshwater at Jucheon River, and emended description of Roseateles aquaticus comb. nov.
Sunho Park, Inhyup Kim, Geeta Chhetri, Yoonseop So, Yonghee Jung, Haejin Woo, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Species-specificity of the secondary biosynthetic potential in Bacillus
Qun-Jian Yin, Ti-Ti Ying, Zhen-Yi Zhou, Gang-Ao Hu, Cai-Ling Yang, Yi Hua, Hong Wang, Bin Wei
Frontiers in Microbiology.2023;[Epub] CrossRef
Taxonomic Study of Three Novel Paenibacillus Species with Cold-Adapted Plant Growth-Promoting Capacities Isolated from Root of Larix gmelinii
Han Xue, Yan Tu, Tengfei Ma, Ning Jiang, Chungen Piao, Yong Li
Microorganisms.2023; 11(1): 130. CrossRef
Characterization and Antioxidant Activity of Exopolysaccharides Produced by Lysobacter soyae sp. nov Isolated from the Root of Glycine max L.
Inhyup Kim, Geeta Chhetri, Yoonseop So, Sunho Park, Yonghee Jung, Haejin Woo, Taegun Seo
Microorganisms.2023; 11(8): 1900. CrossRef
Cyclitol metabolism is a central feature of Burkholderia leaf symbionts
Bram Danneels, Monique Blignaut, Guillaume Marti, Simon Sieber, Peter Vandamme, Marion Meyer, Aurélien Carlier
Environmental Microbiology.2023; 25(2): 454. CrossRef
Sphingomonas abietis sp. nov., an Endophytic Bacterium Isolated from Korean Fir
Lingmin Jiang, Hanna Choe, Yuxin Peng, Doeun Jeon, Donghyun Cho, Yue Jiang, Ju Huck Lee, Cha Young Kim, Jiyoung Lee
Journal of Microbiology and Biotechnology.2023; 33(10): 1292. CrossRef
Description of Brachybacterium sillae sp. nov., a thermophilic bacterium isolated from a hot spring
Dariimaa Ganbat, DoKyung Oh, Yong-Jik Lee, Dong-Woo Lee, Seong-Bo Kim, Won-Jae Chi, Ki-Eun Lee, Byoung-Hee Lee, You-Jung Jung, Jung-Sook Lee, Sang-Jae Lee
Antonie van Leeuwenhoek.2023; 116(8): 791. CrossRef
Bacillus velezensis RC116 Inhibits the Pathogens of Bacterial Wilt and Fusarium Wilt in Tomato with Multiple Biocontrol Traits
Honghong Dong, Ruixiang Gao, Yijie Dong, Qing Yao, Honghui Zhu
International Journal of Molecular Sciences.2023; 24(10): 8527. CrossRef
Cultivation of marine bacteria of the SAR202 clade
Yeonjung Lim, Ji-Hui Seo, Stephen J. Giovannoni, Ilnam Kang, Jang-Cheon Cho
Nature Communications.2023;[Epub] CrossRef
Complex evolutionary history of photosynthesis in Bradyrhizobium
Juanita R. Avontuur, P. Markus Wilken, Marike Palmer, Martin P. A. Coetzee, Tomasz Stępkowski, Stephanus N. Venter, Emma T. Steenkamp
Microbial Genomics .2023;[Epub] CrossRef
Brevibacillus ruminantium sp. nov., isolated from cow faeces
Seunghwan Kim, Jun Heo, Soon-Wo Kwon, Daseul Lee, Byeong-Hak Han, Seung-Beom Hong, Yiseul Kim
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Rhizobium acaciae sp. nov., a new nitrogen-fixing symbiovar isolated from root nodules of Acacia saligna in Tunisia
Jihed Hsouna, Houda Ilahi, Jia-Cheng Han, Takwa Gritli, Walid Ellouze, Xiao Xia Zhang, Maroua Mansouri, Praveen Rahi, Mustapha Missbah El Idrissi, Mouad Lamrabet, M'hamed Oubla, Pierre Emmanuel Courty, Daniel Wipf, James T. Tambong, Bacem Mnasri
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Asticcacaulis aquaticus sp. nov., Asticcacaulis currens sp. nov. and Asticcacaulis machinosus sp. nov., isolated from streams in PR China
Huibin Lu, Li Chen, Lingyang Kong, Linpei Huang, Guangjie Chen
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Maritalea mediterranea sp. nov., isolated from marine plastic residues
Àngela Vidal-Verdú, Esther Molina-Menor, Leila Satari, Javier Pascual, Juli Peretó, Manuel Porcar
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Acidaminococcus homini s sp. nov., Amedibacillus hominis sp. nov., Lientehia hominis gen. nov. sp. nov., Merdimmobilis hominis gen. nov. sp. nov., and Paraeggerthella hominis sp. nov., isolated from human faeces
Rashidin Abdugheni, Dan-Hua Li, Yu-Jing Wang, Meng-Xuan Du, Nan Zhou, Chang Liu, Shuang-Jiang Liu
International Journal of Systematic and Evolutionary Microbiology.2023;[Epub] CrossRef
Streptomyces albidoflavus Q antifungal metabolites inhibit the ergosterol biosynthesis pathway and yeast growth in fluconazole-resistant Candida glabrata : phylogenomic and metabolomic analyses
Celia Bautista-Crescencio, Arturo Casimiro-Ramos, M. Jonathan Fragoso-Vázquez, José Correa-Basurto, Carlos Olano, César Hernández-Rodríguez, Lourdes Villa-Tanaca, Edward Sionov
Microbiology Spectrum.2023;[Epub] CrossRef
Neopusillimonas aromaticivorans sp. nov. isolated from poultry manure
Shih-Yao Lin, Tzu-Yu Lin, Asif Hameed, Yu-Shan Tang, Chiu-Chung Young
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Microbacterium nymphoidis sp. nov. and Microbacterium festucae sp. nov., two novel species with high plant-promoting potential isolated from wetland plants in China
Chunyi Li, Xiaoqian Jin, Fu Yang, Jiayi Zhao, Siyu Wang, Qiwu Sun, Lubin Li, Lei Liu
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Salipiger pentaromativorans sp. nov., a polycyclic aromatic hydrocarbon-degrading bacterium isolated from mangrove sediment
Jiangwei Li, Qiliang Lai, Anyi Hu, Huijie Liu, Dan Qin, Xiaoyong Yang, Yun Tian, Chang-Ping Yu
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Dermatobacter hominis gen. nov., sp. nov., a new member of the family Iamiaceae, revealed the potential utilisation of skin-derived metabolites
HyungWoo Jo, Chaeyun Baek, Young Mok Heo, Hye-Been Kim, Haeun Lee, Seunghyun Kang, Seyoung Mun, Yunseok Oh, Doyeong Ko, Kyudong Han, Raúl Riesco, Martha E. Trujillo, Dong-Geol Lee
Antonie van Leeuwenhoek.2023; 116(11): 1139. CrossRef
Cerina litoralis gen. nov., sp. nov., a novel potential polysaccharide degrading bacterium of the family Flavobacteriaceae, isolated from marine sediment
Ya-Wei Wang, Xin-Hui Wang, Jing Zhang, Zong-Jun Du, Da-Shuai Mu
Antonie van Leeuwenhoek.2023; 116(12): 1447. CrossRef
Sphingomonas liriopis sp. nov., Sphingomonas donggukensis sp. nov., and Sphingomonas tagetis sp. nov., isolated from Liriope platyphylla fruit, soil, and Tagetes patula roots
Inhyup Kim, Geeta Chhetri, Yoonseop So, Yonghee Jung, Sunho Park, Taegun Seo
Archives of Microbiology.2023;[Epub] CrossRef
Characterization of phytopathogen-preying Hyalangium versicolor sp. nov., and proposal for the reclassification of Cystobacter gracilis as Hyalangium gracile comb. Nov
Xianjiao Zhang, Guangda Feng, Yang Liu, Jiali Li, Xiaoqin Deng, Qing Yao, Honghui Zhu
Archives of Microbiology.2023;[Epub] CrossRef
Thiorhodovibrio frisius and Trv. litoralis spp. nov., Two Novel Members from a Clade of Fastidious Purple Sulfur Bacteria That Exhibit Unique Red-Shifted Light-Harvesting Capabilities
Anika Methner, Steven Kuzyk, Jörn Petersen, Sabine Bauer, Henner Brinkmann, Katja Sichau, Gerhard Wanner, Jacqueline Wolf, Meina Neumann-Schaal, Petra Henke, Marcus Tank, Cathrin Spröer, Boyke Bunk, Jörg Overmann
Microorganisms.2023; 11(10): 2394. CrossRef
Genomic attributes and characterization of novel exopolysaccharide-producing bacterium Halomonas piscis sp. nov. isolated from jeotgal
Bora Kim, Ah-In Yang, Hae-In Joe, Ki Hyun Kim, Hanna Choe, Sung-Hong Joe, Min Ok Jun, Na-Ri Shin
Frontiers in Microbiology.2023;[Epub] CrossRef
Corynebacterium lipophilum sp. nov., a lipophilic bacterium isolated from clinical breast specimens and emended description of the species Corynebacterium pilbarense
Qiang Luo, Haimin Luo, Tianqi Zhang, Xiaofang Liu, Xiaowei Chen, Qianming Chen, Junhui Feng, Pinghua Qu, Cha Chen, Ning Xu
Antonie van Leeuwenhoek.2023; 116(10): 1091. CrossRef
Arcobacter roscoffensis sp. nov., a marine bacterium isolated from coastal seawater
Javier Pascual, Cendrella Lepleux, Anika Methner, Cathrin Spröer, Boyke Bunk, Jörg Overmann
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Ferranicluibacter rubi gen. nov., sp. nov., a new member of family Rhizobiaceae isolated from stems of elmleaf blackberry (Rubus ulmifolius Schott) in Northwest Spain
Rocio Roca-Couso, Jose David Flores-Felix, Jose M. Igual, Paula García-Fraile, Encarna Velázquez, Raúl Rivas
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Sulfurovum mangrovi sp. nov., an obligately chemolithoautotrophic, hydrogen-oxidizing bacterium isolated from coastal marine sediments
Yufei Li, Shasha Wang, Bowen Ji, Qing Yuan, Shiping Wei, Qiliang Lai, Kaiyue Wu, Lijing Jiang, Zongze Shao
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Hominibacterium faecale gen. nov., sp. nov., an anaerobic l-arginine-degrading bacterium isolated from human feces
Noori Borhanudin, Min Yang, Andrei V. Chaplin, Jiang Li, Qiong Wang, Li-rong Dai, Ke-jia Wu, Shi-chun Ma, Boris A. Efimov, Lei Cheng
Archives of Microbiology.2023;[Epub] CrossRef
Curtobacterium caseinilyticum sp. nov., Curtobacterium subtropicum sp. nov. and Curtobacterium citri sp. nov., isolated from citrus phyllosphere
Guang-Da Feng, Jiali Li, Songzhen Yang, Jun Zhang, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Vibrio intestinalis sp. nov., isolated from intestine of seahorse
Libo Yu, Shiping Wei, Zhidong Zhou, Zongze Shao
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Chitinophaga nivalis sp. nov., isolated from forest soil in Pyeongchang, Republic of Korea
Ngoc Hoang Trinh, Jaisoo Kim
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Reclassification of Clostridium cocleatum, Clostridium ramosum, Clostridium spiroforme and Clostridium saccharogumia as Thomasclavelia cocleata gen. nov., comb. nov., Thomasclavelia ramosa comb. nov., gen. nov., Thomasclavelia spiroformis comb. nov. and T
Paul A. Lawson, Liz Saavedra Perez, Krithivasan Sankaranarayanan
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Paracoccus albicereus sp. nov., isolated from the shallow-sea hydrothermal system off Kueishantao Island
Yajie He, Dan Lin, Beihan Chen, Xinzhu Liu, Jianing Ye, Jia Sun, Kai Tang
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Flectobacillus longus sp. nov. and Flectobacillus rivi sp. nov., isolated from streams in China and reclassification of Flectobacillus rhizosphaerae as a synonym of Flectobacillus roseus
Huibin Lu, Ping Li, Li Chen, Guangjie Chen
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Aequorivita vitellina sp. nov. and Aequorivita xiaoshiensis sp. nov., isolated from marine sediment
Ya-Wei Wang, Jing Zhang, Shu-Xin Wang, Zong-Jun Du, Da-Shuai Mu
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Two novel symbiovars of Bradyrhizobium yuanmingense, americaense and caribense, the symbiovar tropici of Bradyrhizobium pachyrhizi and the symbiovar cajani of Bradyrhizobium cajani are microsymbionts of the legume Cajanus cajan in Dominican Republic
José David Flores-Félix, Fernando Sánchez-Juanes, Juan Araujo, César Antonio Díaz-Alcántara, Encarna Velázquez, Fernando González-Andrés
Systematic and Applied Microbiology.2023; 46(5): 126454. CrossRef
Frateuria soli sp. nov. and Frateuria edaphi sp. nov., isolated from greenhouse soil
Miyoung Won, Jun Heo, Hang-Yeon Weon, Daseul Lee, Byeong-Hak Han, Seung-Beom Hong, Soon-Wo Kwon
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Four new Microbacterium species isolated from seaweeds and reclassification of five Microbacterium species with a proposal of Paramicrobacterium gen. nov. under a genome-based framework of the genus Microbacterium
Soon Dong Lee, Hong Lim Yang, In Seop Kim
Frontiers in Microbiology.2023;[Epub] CrossRef
Actinomadura terrae sp. nov. and Actinomadura litoris OS3-89, isolated from rhizosphere soil of cactus
Soon Dong Lee, Hong Lim Yang, In Seop Kim, Hanna Choe, Ji-Sun Kim
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Bioplastic (poly-3-hydroxybutyrate)-producing Massilia endophytica sp. nov., isolated from Cannabis sativa L. ‘Cheungsam’
Doeun Jeon, Lingmin Jiang, Ki-Hyun Kim, Yuxin Peng, Donghyun Cho, Rae-Dong Jeong, Cha Young Kim, Jae Cheol Jeong, Jiyoung Lee
Scientific Reports.2023;[Epub] CrossRef
Similar but different: Characterization of dddD gene–mediated DMSP metabolism among coral-associated Endozoicomonas
Yu-Jing Chiou, Ya-Fan Chan, Sheng-Ping Yu, Chih-Ying Lu, Silver Sung-Yun Hsiao, Pei-Wen Chiang, Ting-Chang Hsu, Po-Yu Liu, Naohisa Wada, Yu Lee, Wann-Neng Jane, Der-Chuen Lee, Yu-Wen Huang, Sen-Lin Tang
Science Advances.2023;[Epub] CrossRef
Halomonas dongshanensis sp. nov., isolated from the seawater of Dongshan Island
Wen-zhen Lin, Lin-feng Gong, Ying Guo, Ru-zhen Liu, Wei Xu, Qi-yang Guan, Chi-ming Guo, Zhi-kai Lin, Hong-yan Meng, Xiao-yao Chen
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Reclassification of Sabulilitoribacter multivorans and Sabulilitoribacter arenilitoris as Flaviramulus multivorans comb. nov. and Wocania arenilitoris comb. nov., respectively, based on genome sequence analysis
Ang Liu, Xinyue Dong, Wanting Wang, Jiayi Qin, Hongyu Leng, Chenlong Yan, Longyu Zhao
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Tahibacter harae sp. nov., isolated from pig farm soil in Guangdong, PR China
Haixin Chen, Yang Zhou, Qing Yao, Hongxia Jiang, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Paenibacillus soyae sp. nov., isolated from the rhizosphere of soya bean
Hui Zhao, Yue Su, Qihui Gu, Jumei Zhang, Xinqiang Xie, Qingping Wu
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Maribacter aquimaris sp. nov., isolated from seawater adjacent to Fildes Peninsula, Antarctica
Yanfeng Zhang, Yanwu Zhai, Lulu Mu, Miaomiao Hu, Wei Fang, Yazhong Xiao, Zemin Fang
Antonie van Leeuwenhoek.2023; 116(8): 753. CrossRef
Three novel marine species of the genus Reichenbachiella exhibiting degradation of complex polysaccharides
Neak Muhammad, Forbes Avila, Olga I. Nedashkovskaya, Song-Gun Kim
Frontiers in Microbiology.2023;[Epub] CrossRef
Isolation of Spirosoma foliorum sp. nov. from the fallen leaf of Acer palmatum by a novel cultivation technique
Ho Le Han, Dian Alfian Nurcahyanto, Neak Muhammad, Yong-Jae Lee, Tra T. H. Nguyen, Song-Gun Kim, Sook Sin Chan, Kuan Shiong Khoo, Kit Wayne Chew, Pau Loke Show, Thi Ngoc Thu Tran, Thi Dong Phuong Nguyen, Chen Yaw Chiu
Scientific Reports.2023;[Epub] CrossRef
Identification and genomic analysis of Pseudosulfitobacter koreense sp. nov. isolated from toxin-producing dinoflagellate Alexandrium pacificum
Yue Jiang, Zhun Li
Archives of Microbiology.2023;[Epub] CrossRef
Agromyces larvae sp. nov., a novel actinobacterium isolated from gut of larvae of Protaetia brevitarsis seulensis
Miyoung Won, Parthiban Subramanian, Seunghwan Kim, Jun Heo, Hanako Naito, Tomomi Asano, Moriyuki Hamada, Soon-Wo Kwon
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Antioxidant prodigiosin-producing cold-adapted Janthinobacterium sp. ERMR3:09 from a glacier moraine: Genomic elucidation of cold adaptation and pigment biosynthesis
Srijana Mukhia, Anil Kumar, Rakshak Kumar
Gene.2023; 857: 147178. CrossRef
Oryzibacter oryziterrae gen. nov., sp. nov., isolated from rice paddy soil
Hyo-Jin Lee, Kyung-Sook Whang
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Trinickia mobilis sp. nov. and Trinickia acidisoli sp. nov., isolated from soil
You-qi Wang, Bing-nan Zhao, Xiu-yin Guo, Ke-cheng Wu, Li-hong Qiu
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Metabolic Versatility of the FamilyHalieaceaeRevealed by the Genomics of Novel Cultured Isolates
Shan-Hui Li, Ilnam Kang, Jang-Cheon Cho, Eva C. Sonnenschein
Microbiology Spectrum.2023;[Epub] CrossRef
Description of Luteibacter aegosomatis sp. nov., Luteibacter aegosomaticola sp. nov., and Luteibacter aegosomatissinici sp. nov. isolated from the Intestines of Aegosoma sinicum Larvae
Hae-In Joe, Jee-Won Choi, June-Young Lee, Hojun Sung, Su-Won Jeong, Yun-Seok Jeong, Jae-Yun Lee, Jin-Woo Bae
Journal of Microbiology.2023; 61(6): 603. CrossRef
Alkalimarinus alittae sp. nov., isolated from gut of marine sandworm (Alitta virens) and emended description of the genus Alkalimarinus
Ah-In Yang, Hae-In Joe, Hanna Choe, Han Sol Kim, Mi Kyung Eom, Zhun Li, Min Ok Jun, Bora Kim, Jung-Sook Lee, Na-Ri Shin
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Pan-Genome Analyses of the Genus Cohnella and Proposal of the Novel Species Cohnella silvisoli sp. nov., Isolated from Forest Soil
Chunling Wang, Lutian Mao, Gegen Bao, Honghui Zhu
Microorganisms.2023; 11(11): 2726. CrossRef
Five novel Hymenobacter species isolated from air: Hymenobacter cellulosilyticus sp. nov., Hymenobacter cellulosivorans sp. nov., Hymenobacter aerilatus sp. nov., Hymenobacter sublimis sp. nov. and Hymenobacter volaticus sp. nov.
Yiseul Kim, Parthiban Subramanian, Hyorim Choi, Hang-Yeon Weon, Seunghwan Kim, Soon-Wo Kwon, Daseul Lee, Byeong-Hak Han, Seung-Beom Hong, Jun Heo
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Vogesella aquatica sp. nov. and Vogesella margarita sp. nov., isolated from rivers in Southwest China
Huibin Lu, Li Chen, Lingyang Kong, Linpei Huang, Guangjie Chen
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
tilS and rpoB: New Molecular Markers for Phylogenetic and Biodiversity Studies of the Genus Thiothrix
Nikolai V. Ravin, Dmitry D. Smolyakov, Nikita D. Markov, Alexey V. Beletsky, Andrey V. Mardanov, Tatyana S. Rudenko, Margarita Yu. Grabovich
Microorganisms.2023; 11(10): 2521. CrossRef
Poseidonibacter ostreae sp. nov., Isolated from the Gut of Ostrea from the Seomjin River
Kiwoon Baek, Sumin Jang, Eu Jin Chung, Shi Hyun Ryu, Ahyoung Choi
Diversity.2023; 15(8): 920. CrossRef
Paenibacillus dendrobii sp. nov., an indole-3-acetic acid-producing endophytic bacterium isolated from Dendrobium nobile
Yadong Hu, Hongjie Li, Yaoyi Chen, Qiling Zhang, Shigang Zheng, Dan Rao, Ze Chun, Ruoxi Zhao
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Gillisia lutea sp. nov., isolated from marine aluminium residues from the Mediterranean sea
Àngela Vidal-Verdú, Esther Molina-Menor, Javier Pascual, Juli Peretó, Manuel Porcar
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Flavobacterium potami sp. nov., a multi-metal resistance genes harbouring bacterium isolated from shallow river silt
Shucheng Li, Sidi Mao, Weidong Mu, Bai Guo, Chen Li, Qing Zhu, Xiaoxiao Hou, Yanfang Zhao, Shuzhen Wei, Hongliang Liu, Aiju Liu
Antonie van Leeuwenhoek.2023; 116(3): 265. CrossRef
Ligilactobacillus cholophilus sp. nov., isolated from pickled potherb mustard (Brassica juncea Coss.)
Quanlu Ren, Danqi Wang, Jin Han, Jing Wang, Zhenmin Liu, Zhengjun Wu
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
EasyCGTree: a pipeline for prokaryotic phylogenomic analysis based on core gene sets
Dao-Feng Zhang, Wei He, Zongze Shao, Iftikhar Ahmed, Yuqin Zhang, Wen-Jun Li, Zhe Zhao
BMC Bioinformatics.2023;[Epub] CrossRef
Genome-based analyses of the genus Acidovorax: proposal of the two novel genera Paracidovorax gen. nov., Paenacidovorax gen. nov. and the reclassification of Acidovorax antarcticus as Comamonas antarctica comb. nov. and emended description of the genus Ac
Juan Du, Yang Liu, Honghui Zhu
Archives of Microbiology.2023;[Epub] CrossRef
Genomic insights of an alkaliphilic bacterium Halalkalibacter alkaliphilus sp. nov. isolated from an Indian Soda Lake
Amaraja Joshi, Sonia Thite, Tushar Lodha, Neetha Joseph, Purva Mengade
Antonie van Leeuwenhoek.2023; 116(5): 435. CrossRef
Genome-Wide Pathway Exploration of the Epidermidibacterium keratini EPI-7T
Yunseok Oh, Seyoung Mun, Young-Bong Choi, HyungWoo Jo, Dong-Geol Lee, Kyudong Han
Microorganisms.2023; 11(4): 870. CrossRef
Pseudomonas cucumis sp. nov., isolated from the rhizosphere of crop plants
Kaiji Liao, Jianying Liu, Yi-Lin Gu, Can Wang, Hai-Lei Wei
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Three marine species of the genus Fulvivirga, rich sources of carbohydrate-active enzymes degrading alginate, chitin, laminarin, starch, and xylan
Tra T. H. Nguyen, Tien Q. Vuong, Ho Le Han, Zhun Li, Yong-Jae Lee, Jaeho Ko, Olga I. Nedashkovskaya, Song-Gun Kim
Scientific Reports.2023;[Epub] CrossRef
Novosphingobium beihaiensis sp. nov., a novel pesticide-tolerant bacterium isolated from mangrove sediments
Wenjin Hu, Yiying Huang, Yingjing Liu, Xiaoying Zhou, Shushi Huang, Jiemei Chu, Xinli Pan
Antonie van Leeuwenhoek.2023; 116(11): 1151. CrossRef
Paracoccus onchidii sp. nov., a moderately halophilic bacterium isolated from a marine invertebrate from the South China Sea
Shan-shan Xu, Qi-liang Lai, Zeng-zhi Liu, Ying Xu
Antonie van Leeuwenhoek.2023; 116(8): 801. CrossRef
Ideonella oryzae sp. nov., isolated from soil, and Spirosoma liriopis sp. nov., isolated from fruits of Liriope platyphylla
Yonghee Jung, Geeta Chhetri, Inhyup Kim, Yoonseop So, Sunho Park, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Mariniradius sediminis sp. nov., a multi-xenobiotics degrading genes harbouring bacterium isolated from sediment of river
Shucheng Li, Weidong Mu, Haoran Liu, Bai Guo, Sidi Mao, Changqing Su, Hui Li, Zhiqiang Zhang, Aijv Liu, Shuzhen Wei, Hongliang Liu
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Description of Xanthocytophaga agilis sp. nov. and Xanthocytophaga flavus sp. nov. of the new genus Xanthocytophaga gen. nov and the proposal of Rhodocytophagaceae fam. nov. within the order Cytophagales
Xianjiao Zhang, Guang-Da Feng, Yang Liu, Fan Yang, Yanxuan Li, Xiaoqin Deng, Honghui Zhu, Qing Yao
Archives of Microbiology.2023;[Epub] CrossRef
A nostoxanthin-producing bacterium, Sphingomonas nostoxanthinifaciens sp. nov., alleviates the salt stress of Arabidopsis seedlings by scavenging of reactive oxygen species
Lingmin Jiang, Jiyoon Seo, Yuxin Peng, Doeun Jeon, Ju Huck Lee, Cha Young Kim, Jiyoung Lee
Frontiers in Microbiology.2023;[Epub] CrossRef
Halobacillus salinarum sp. nov., Halobacillus shinanisalinarum sp. nov. and Halobacillus amylolyticus sp. nov., isolated from saltern soil
Yiseul Kim, Seunghwan Kim, Soon-Wo Kwon, Hang-Yeon Weon, Hanako Naito, Tomomi Asano, Moriyuki Hamada, Jun Heo
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Lignin-oxidizing and xylan-hydrolyzing Vibrio involved in the mineralization of plant detritus in the continental slope
Jianyang Li, Chunming Dong, Biswarup Sen, Qiliang Lai, Linfeng Gong, Guangyi Wang, Zongze Shao
Science of The Total Environment.2023; 854: 158714. CrossRef
Alteromonas gilva sp. nov. and Erythrobacter fulvus sp. nov., isolated from a tidal mudflat
Sunho Park, Inhyup Kim, Geeta Chhetri, Yoonseop So, Yonghee Jung, Haejin Woo, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Sphingobium nicotianae sp. nov., isolated from tobacco soil
Rongrong Fan, Xiong Luo, Mengjuan Hong, Ruijia Yang, Xinyi Dong, Heli Shi, Mingshun Li
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Investigation of the potential of Brevibacillus spp. for the biosynthesis of nonribosomally produced bioactive compounds by combination of genome mining with MALDI-TOF mass spectrometry
Jennifer Jähne, Stefanie Herfort, Joerg Doellinger, Peter Lasch, Le Thi Thanh Tam, Rainer Borriss, Joachim Vater
Frontiers in Microbiology.2023;[Epub] CrossRef
Phylogenomic analysis of the genus Alcanivorax: proposal for division of this genus into the emended genus Alcanivorax and two novel genera Alloalcanivorax gen. nov. and Isoalcanivorax gen. nov.
Anusha Rai, Gandham Suresh, Biswas Ria, Vighnesh L, Sreya PK, Sahu Ipsita, Chintalapati Sasikala, Chintalapati Venkata Ramana
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Corynebacterium oculi-related bacterium may act as a pathogen and carrier of antimicrobial resistance genes in dogs: a case report
Milena Tresch, Christine Watté, Michele Stengard, Corinne Ritter, Isabelle Brodard, Simon Feyer, Estelle Gohl, Ezgi Akdesir, Vincent Perreten, Sonja Kittl
BMC Veterinary Research.2023;[Epub] CrossRef
Jeongeuplla avenae gen. nov., sp. nov., a novel β-carotene-producing bacterium that alleviates salinity stress in Arabidopsis
Lingmin Jiang, Yuxin Peng, Ki-Hyun Kim, Doeun Jeon, Hanna Choe, Ah-Reum Han, Cha Young Kim, Jiyoung Lee
Frontiers in Microbiology.2023;[Epub] CrossRef
Taxonomic descriptions of Aeromicrobium duanguangcaii sp. nov., Aeromicrobium wangtongii sp. nov. and Aeromicrobium senzhongii sp. nov.
Lin Ye, Gui Zhang, Jing Yang, Caixin Yang, Yue Liu, Ji Pu, Yuyuan Huang, Sihui Zhang, Dong Jin, Shan Lu, Liyun Liu, Jianguo Xu
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Characterization of four novel bacterial species of the genus Sphingomonas, Sphingomonas anseongensis, Sphingomonas alba, Sphingomonas brevis and Sphingomonas hankyongi sp.nov., isolated from wet land
Muhammad Zubair Siddiqi, Govindan Rajivgandhi, Soon-Youl Lee, Wan-Taek Im
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Neiella litorisoli sp. nov., an alginate lyase: producing bacterium from South China Sea, and proposal of Echinimonadaceae fam. nov. in the order Alteromonadales
Jing-Ran Sun, Kun-Lian Mo, Xue Li, Yong-Hua Hu, Zhi-Yuan Liu, Hui-Qin Huang
Archives of Microbiology.2023;[Epub] CrossRef
Paraburkholderia flagellata sp. nov. and Paraburkholderia adhaesiva sp. nov., two novel species isolated from forest soil in Dinghushan Biosphere Reserve in Guangdong, China
Xiu-yin Guo, Ke-cheng Wu, Cheng-zhi Dong, Qiu-mei Zhang, Li-hong Qiu
Antonie van Leeuwenhoek.2023; 116(10): 1023. CrossRef
Comparative genomics reveals environmental adaptability and antimicrobial activity of a novel Streptomyces isolated from soil under black Gobi rocks
Ying Wen, Binglin Zhang, Gaosen Zhang, Minghui Wu, Ximing Chen, Tuo Chen, Guangxiu Liu, Wei Zhang
Antonie van Leeuwenhoek.2023; 116(12): 1407. CrossRef
Phylotaxonomic assessment based on four core gene sets and proposal of a genus definition among the families Paracoccaceae and Roseobacteraceae
Dao-Feng Zhang, Wei He, Zongze Shao, Iftikhar Ahmed, Yuqin Zhang, Wen-Jun Li, Zhe Zhao
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Pseudarthrobacter humi sp. nov., an actinobacterium isolated from soil
Inhyup Kim, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Description of Salinimicrobium tongyeongense sp. nov., isolated from seawater
Dariimaa Ganbat, Dong-Woo Lee, Seong-Bo Kim, Yong-Jik Lee, Gaewon Nam, Won-Jae Chi, Byoung-Hee Lee, You-Jung Jung, Jung-Sook Lee, Sang-Jae Lee
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Biocontrol potential of bacteria belonging to the Bacillus subtilis group against pests and diseases of agricultural interest through genome exploration
Gabriela Teodoro Rocha, Paulo Roberto Martins Queiroz, Priscila Grynberg, Roberto Coiti Togawa, Antônia Débora Camila de Lima Ferreira, Izabela Nunes do Nascimento, Ana Cristina Meneses Mendes Gomes, Rose Monnerat
Antonie van Leeuwenhoek.2023; 116(7): 599. CrossRef
Mesorhizobium liriopis sp. nov., isolated from the fermented fruit of Liriope platyphylla a medicinal plant
Inhyup Kim, Geeta Chhetri, Yoonseop So, Sunho Park, Yonghee Jung, Haejin Woo, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Tianweitania aestuarii sp. nov., isolated from a coastal dune, reclassification of Corticibacterium populi as Tianweitania populi comb. nov., and emended description of the genus Tianweitania
Ji Hyeon Song, Sooyeon Park, Jung-Sook Lee, Wonyong Kim, Jung-Hoon Yoon
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Roseobacter insulae sp. nov. and Loktanella gaetbuli sp. nov., isolated from tidal flats in the Yellow Sea in Korea
Eun Bee Lee, Sooyeon Park, Wonyong Kim, Jung-Hoon Yoon
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
UFCG: database of universal fungal core genes and pipeline for genome-wide phylogenetic analysis of fungi
Dongwook Kim, Cameron L M Gilchrist, Jongsik Chun, Martin Steinegger
Nucleic Acids Research.2023; 51(D1): D777. CrossRef
Bioassay and Whole-Genome Analysis of Bacillus velezensis FIO1408, a Biocontrol Agent Against Pathogenic Bacteria in Aquaculture
Wenhao Huang, Lingyun Qu, Ping Gao, Guangxun Du
Current Microbiology.2023;[Epub] CrossRef
VBCG: 20 validated bacterial core genes for phylogenomic analysis with high fidelity and resolution
Renmao Tian, Behzad Imanian
Microbiome.2023;[Epub] CrossRef
Neoroseomonas alba sp. nov., Neoroseomonas nitratireducens sp. nov., Paraoseomonas indoligenes sp. nov and Paraoseomonas baculiformis sp. nov., isolated from the rhizosphere of paddy soil
Yoonseop So, Geeta Chhetri, Inhyup Kim, Jiyoun Kim, Sunho Park, Yonghee Jung, Taegun Seo
Antonie van Leeuwenhoek.2023; 116(10): 1009. CrossRef
Microbacterium plantarum sp. nov. and Microbacterium thalli sp. nov., two endophytic metal-resistant bacteria isolated from Sphaeralcea angustifolia (Cav.) G. Don and Prosopis laevigata (Humb. et Bonpl. ex Willd) M.C. Johnston
Ivan Arroyo-Herrera, Brenda Román-Ponce, Rafael Bustamante-Brito, Joseph Guevara-Luna, Violeta Larios-Serrato, Lorena Carro, Jose Mariano Igual, Otto Geiger, Ayixon Sánchez-Reyes, Paulina Estrada-de los Santos, En Tao Wang, María Soledad Vásquez-Murrieta
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Genome insight and probiotic potential of three novel species of the genus Corynebacterium
Md Shamsuzzaman, Ram Hari Dahal, Shukho Kim, Jungmin Kim
Frontiers in Microbiology.2023;[Epub] CrossRef
Marinobacterium lacunae sp. nov. isolated from estuarine sediment
Srinivas Naga Radha Tanuku, Anil Kumar Pinnaka, Swarnaprava Behera, Aditya Singh, Sudharani Pydi, Gunjan Vasudeva, Bhumika Vaidya, Gunjan Sharma, Sampath Kumar Ganta, Naveen Sagar Garbhapu
Archives of Microbiology.2023;[Epub] CrossRef
Solicola gregarius gen. nov., sp. nov., a soil actinobacterium isolated after enhanced cultivation with Micrococcus luteus culture supernatant
Marco A. Lopez Marin, Jachym Suman, Kunal Jani, Pavel Ulbrich, Tomas Cajthaml, Alena Filipova, Petr Pajer, Meina Neumann-Schaal, Michal Strejcek, Ondrej Uhlik
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Draft Genome Sequence of Afifella sp. Strain JA880, Isolated from a Salt Pond
Jagadeeshwari Uppada, Sasikala Chintalapati, Venkata Ramana Chintalapati, J. Cameron Thrash
Microbiology Resource Announcements.2023;[Epub] CrossRef
Sphingomonas cremea sp. nov., isolated from ginseng soil
Yuna Park, Qingzhen Liu, Soohyun Maeng, Hyejin Oh, Chan-Seok Yun, Hanna Choe, Hyang Burm Lee, Wan-Taek Im
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Marixanthotalea marina gen. nov., sp. nov., a bacterium in the family Flavobacteriaceae isolated from seawater
Zi-Yue Fu, Hua-Peng Xue, Wei He, Guang-Yuan Ma, Ai Hua Zhang, Dao-Feng Zhang, Wen-Jun Li
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Aerococcus agrisoli sp. nov., isolated from paddy soil
Lina Sun, Wen Qiu, Xinhua Gao, Zechao Cheng, Kaihua Huang, Wei Chen
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Bacillus changyiensis sp. nov., isolated from coastal sediment
Guiqian Xiao, Qiliang Lai, Guangyu Li, Shanshan Wang, Yunyong Lin, Zongze Shao, Zhong Hu
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Whole-genome sequencing of a biocontrol Myxococcus xanthus R31 isolate and comparative genomic analysis
Honghong Dong, Ruixiang Gao, Yijie Dong, Qing Yao, Honghui Zhu
Gene.2023; 863: 147286. CrossRef
Comparative biodegradation analysis of three compostable polyesters by a marine microbial community
Ingrid E. Meyer Cifuentes, Julius Degenhardt, Meina Neumann-Schaal, Nico Jehmlich, David Kamanda Ngugi, Başak Öztürk, Ning-Yi Zhou
Applied and Environmental Microbiology.2023;[Epub] CrossRef
Leucobacter allii sp. nov. and Leucobacter rhizosphaerae sp. nov., isolated from rhizospheres of onion and garlic, respectively
Seunghwan Kim, Tomomi Asano, Hanako Naito, Moriyuki Hamada, Hang-Yeon Weon, Soon-Wo Kwon, Jun Heo
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Microcystis pangenome reveals cryptic diversity within and across morphospecies
Haiyuan Cai, Christopher J. McLimans, Jessica E. Beyer, Lee R. Krumholz, K. David Hambright
Science Advances.2023;[Epub] CrossRef
Oricola nitratireducens sp. nov., a novel nitrate reducing bacterium isolated from marine sediment in East China Sea
Chaobo Guo, Xinyu Liu, Feilu Xie, Hong Ding, Shan He, Ning Wang, Weiyan Zhang
Antonie van Leeuwenhoek.2023; 116(7): 711. CrossRef
Runella salmonicolor sp. nov. and Dyella lutea sp. nov., isolated from paddy field soil
Sunho Park, Inhyup Kim, Geeta Chhetri, Yoonseop So, Yonghee Jung, Haejin Woo, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Cellulosimicrobium fucosivorans is a later heterotypic synonym of Cellulosimicrobium composti
Lingmin Jiang, Ho Le Han
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Gymnodinialimonas phycosphaerae sp. nov., a phycosphere bacterium isolated from Karlodinium veneficum
Yuxin Peng, Lingmin Jiang, Yue Jiang, Jiyoon Seo, Doeun Jeon, Young-Min Kim, Zhun Li, Jiyoung Lee
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Larsenimonas rhizosphaerae sp. nov., isolated from a tidal mudflat
Soon Dong Lee, In Seop Kim
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Alcanivorax xiamenensis sp. nov., a novel marine hydrocarbonoclastic bacterium isolated from surface seawater
Qiliang Lai, Xiaoteng Fu, Jianning Wang, Chunming Dong, Liping Wang, Wanpeng Wang, Zongze Shao
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
High-quality full genome assembly of historic Xylella fastidiosa strains from ICMP collection using a hybrid sequencing approach
Pragya Kant, Natasha Brohier, Rachel Mann, Luciano Rigano, Robert Taylor, Johanna Wong-Bajracharya, Toni A. Chapman, Monica Kehoe, Rebecca Roach, Brendan Rodoni, Fiona Constable, Vincent Michael Bruno
Microbiology Resource Announcements.2023;[Epub] CrossRef
Comammox Nitrospira and Ammonia-Oxidizing Archaea Are Dominant Ammonia Oxidizers in Sediments of an Acid Mine Lake Containing High Ammonium Concentrations
Deyong Li, Zhichang Ren, Yangqi Zhou, Lugao Jiang, Min Zheng, Guoqiang Liu, Jennifer B. Glass
Applied and Environmental Microbiology.2023;[Epub] CrossRef
Combined Omics Approach Reveals Key Differences between Aerobic and Microaerobic Xylene-Degrading Enrichment Bacterial Communities: Rhodoferax─A Hitherto Unknown Player Emerges from the Microbial Dark Matter
András Táncsics, Sinchan Banerjee, André Soares, Anna Bedics, Balázs Kriszt
Environmental Science & Technology.2023; 57(7): 2846. CrossRef
Sinomonas cellulolyticus sp. nov., isolated from Loktak lake
Lhingjakim L. Khongsai, Jagadeeshwari Uppada, Shabbir Ahamad, Sasikala Chintalapati, Venkata Ramana Chintalapati
Antonie van Leeuwenhoek.2023; 116(12): 1421. CrossRef
Genomic and metabolic insights into the first host-associated isolate of Psychrilyobacter
Meijia Liu, Guangshan Wei, Qiliang Lai, Zhaobin Huang, Min Li, Zongze Shao, Konstantinos Aristomenis Kormas, Muhamad Amin, Ruixuan Wang
Microbiology Spectrum.2023;[Epub] CrossRef
Emergence of Raoultella ornithinolytica in human infections from different hospitals in Ecuador with OXA-48-producing resistance
José E. Villacís, Hugo G. Castelán-Sánchez, Jorge Rojas-Vargas, Ulises E. Rodríguez-Cruz, Viviana Albán, Jorge A. Reyes, Pablo M. Meza-Rodríguez, Sonia Dávila-Ramos, Fernando Villavicencio, Margarita Galarza, Monica C. Gestal
Frontiers in Microbiology.2023;[Epub] CrossRef
Pseudodonghicola flavimaris sp. nov. and Sedimentitalea xiamensis sp. nov., two novel species belonging to the family Roseobacteraceae
Jiamei Huang, Jianning Wang, Guangyu Li, Qiliang Lai, Xuying Zhu, Shanshan Wang, Xiupian Liu, Zongze Shao, Liping Wang
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Phylogeny and structural insights of lipase from Halopseudomonas maritima sp. nov., isolated from sea sand
Ritu Rani Archana Kujur, Manisha Ghosh, Surajit Basak, Subrata K. Das
International Microbiology.2023; 26(4): 1021. CrossRef
Spirosoma oryzicola sp. nov., isolated from dried rice husk
Miyoung Won, Jun Heo, Hang-Yeon Weon, Daseul Lee, Byeong-Hak Han, Seung-Beom Hong, Soon-Wo Kwon
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Characterization of metagenome-assembled genomes of two endo-archaea of Candida tropicalis
Uppada Jagadeeshwari, Chintalapati Sasikala, Anusha Rai, B. Indu, Sahu Ipsita, Chintalapati Venkata Ramana
Frontiers in Microbiomes.2023;[Epub] CrossRef
Pontibacterium sinense sp. nov., a nitrate-reducing and thiosulphate-oxidizing bacterium, isolated from coastal sediment
Rui-Ying Chen, Rui-Jie Chen, De-Chen Lu, Ya Gong, Zong-Jun Du
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
UACG: Up-to-Date Archaeal Core Genes and Software for Phylogenomic Tree Reconstruction
Seong-In Na, Michael James Bailey, Mauricio Chalita, Jae Hyoung Cho, Jongsik Chun
Journal of Microbiology.2023; 61(7): 683. CrossRef
Nocardioides pini sp. nov. and Nocardioides pinisoli sp. nov., two novel actinomycetes isolated from Pinus densiflora
Yoonseop So, Geeta Chhetri, Inhyup Kim, Sunho Park, Yonghee Jung, Haejin Woo, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology.2023;[Epub] CrossRef
Lacticaseibacillus huelsenbergensis sp. nov., isolated from grass silage and corn silage
Monika Grabner F., Monika Grabner H., Hermine Schein, Elisabeth Weidenholzer, Tobias Busche, Christian Rückert-Reed, Marlene Buchebner-Jance
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Desulfovibrio mangrovi sp. nov., a sulfate-reducing bacterium isolated from mangrove sediments: a member of the proposed genus “Psychrodesulfovibrio”
Jinjie Zhou, Cui-Jing Zhang, Meng Li
Antonie van Leeuwenhoek.2023; 116(6): 499. CrossRef
Devosia oryzisoli sp. nov., a novel moderately halotolerant bacterium isolated from the roots of rice plants and genome mining revealed the biosynthesis potential as plant growth promoter
Geeta Chhetri, Inhyup Kim, Taegun Seo
Antonie van Leeuwenhoek.2023; 116(3): 231. CrossRef
Phosphorus Removal and Storage Polymer Synthesis by Tetrasphaera-Related Bacteria with Different Carbon Sources
Zhaonian Yu, Shaoyi Xu, Peiliang Wang, Dezhao Liu, Huijie Lu
ACS ES&T Water.2023; 3(5): 1374. CrossRef
Phycobacter azelaicus gen. nov. sp. nov., a diatom symbiont isolated from the phycosphere of Asterionellopsis glacialis
Lisa S. Y. Coe, Cong Fei, James Weston, Shady A. Amin
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Fluviispira vulneris sp. nov., isolated from human wound secretions
Peijuan Tang, Na Peng, Pengwen Ouyang, Sheng Long, Zhenhua Wei, Xingchun Chen, Pinghua Qu, Liangyi Xie
Antonie van Leeuwenhoek.2023; 116(12): 1305. CrossRef
Revisiting the taxonomy of the genus Rhodopirellula with the proposal for reclassification of the genus to Rhodopirellula sensu stricto, Aporhodopirellula gen. nov., Allorhodopirellula gen. nov. and Neorhodopirellula gen. nov
Pannikurungottu Sreya, Gandham Suresh, Anusha Rai, Biswas Ria, Lakshmanan Vighnesh, Vaibhav Chandrakant Agre, Uppada Jagadeeshwari, Chintalapati Sasikala, Chintalapati Venkata Ramana
Antonie van Leeuwenhoek.2023; 116(3): 243. CrossRef
Nocardioides cremeus sp. nov., Nocardioides abyssi sp. nov. and Nocardioides oceani sp. nov., three actinobacteria isolated from Western Pacific Ocean sediment
Wenjing Wang, Yihan Ding, Shiping Wei, Miaomiao Yin, Gaiyun Zhang
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Gracilimonas sediminicola sp. nov., a moderately halotolerant bacterium isolated from seaweed sediment collected in the East Sea, Republic of Korea
Yunjeong Lee, Veeraya Weerawongwiwat, Jong-Hwa Kim, Jung-Hoon Yoon, Jung-Sook Lee, Ampaitip Sukhoom, Wonyong Kim
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Peptoniphilus equinus sp. nov., a novel Gram-stain-positive anaerobic coccus isolated from the faeces of a thoroughbred racehorse
Hye Su Jung, Jeong Ui Yun, Mi-Ja Jung, Hye Seon Song, Yeon Bee Kim, Yujin Kim, Joon-Gyu Kim, Che Ok Jeon, Seong Woon Roh, Tae Woong Whon, Se Hee Lee
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Holtiella tumoricola gen. nov. sp. nov., isolated from a human clinical sample
Emma Allen-Vercoe, Michelle C. Daigneault, Sarah J. Vancuren, Kyla Cochrane, Lindsey L. O’Neal, Krithivasan Sankaranarayanan, Paul A. Lawson
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Gimibacter soli gen. nov. sp. nov., isolated from mangrove soil and insight into its ecological distribution and metabolic potential
Yang Liu, Tao Pei, Jiao Duan, Juan Du, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Flavobacterium frigoritolerans sp. nov. and Flavobacterium shii sp. nov., isolated from glaciers on the Tibetan Plateau
Lei-Lei Yang, Hong-Can Liu, Yu-Hua Xin, Qing Liu
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Leucobacter edaphi sp. nov., a highly chromate-tolerant bacterium isolated from chromium containing chemical plant soil
Bijun Zheng, Zhe Xu, Li Yang, Guangyang Jiang, Jia Chen, Yichen Yang, Yongqiang Tian
Antonie van Leeuwenhoek.2023; 116(12): 1433. CrossRef
Nitratireductor luteus sp. nov. isolated from saline-alkali land
Xinping Yang, Liuyan Zhou, Xiaowu Wang, Zhifang Wang, Pengbin Li, Jinping Dai, Huitao Zhang, Yuqing Xie
Antonie van Leeuwenhoek.2023; 116(3): 221. CrossRef
Melaminivora suipulveris sp. nov., isolated from pigpen dust
Miyoung Won, Jun Heo, Daseul Lee, Byeong-Hak Han, Seung-Beom Hong, Soon-Wo Kwon
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Trinickia violacea sp. nov. and Trinickia terrae sp. nov., isolated from forest soil
Zeng-hong Gao, Xiu-yin Guo, Yi-zhi Liu, Qiu-mei Zhang, Xin-jie Tong, Li-hong Qiu
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Polycladospora coralii gen. nov., sp. nov., a novel member of the family Thermoactinomycetaceae isolated from stony coral in the South China Sea
Kunlian Mo, Huiqin Huang, Lin Ye, Qingjuan Wu, Yong hua Hu
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Comparative genomics and transcriptomics insight into myxobacterial metabolism potentials and multiple predatory strategies
Chunling Wang, Yi Xiao, Yong Wang, Yumin Liu, Qing Yao, Honghui Zhu
Frontiers in Microbiology.2023;[Epub] CrossRef
Acinetobacter thutiue sp. nov. Isolated from Oil-Contaminated Soil in Motorbike Repair Workshops
Nhan Le Thi Tuyet, Jaisoo Kim
Diversity.2023; 15(12): 1179. CrossRef
Chryseobacterium edaphi sp. nov. and Chryseobacterium gilvum sp. nov., isolated from soil
Yonghee Jung, Geeta Chhetri, Inhyup Kim, Yoonseop So, Sunho Park, Haejin Woo, Ki-Ho Lee, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Ten Novel Species Belonging to the Genus Flavobacterium, Isolated from Freshwater Environments: F. praedii sp. nov., F. marginilacus sp. nov., F. aestivum sp. nov., F. flavigenum sp. nov., F. luteolum sp. nov., F. gelatinilyticum sp. nov., F. aquiphilum s
Hyunyoung Jo, Miri S. Park, Yeonjung Lim, Ilnam Kang, Jang-Cheon Cho
Journal of Microbiology.2023; 61(5): 495. CrossRef
Description of Flavobacterium agricola sp. nov., an auxin producing bacterium isolated from paddy field
Shih-Yao Lin, Asif Hameed, Chia-Fang Tsai, Chiu-Chung Young
Antonie van Leeuwenhoek.2023; 116(12): 1345. CrossRef
Blastopirellula sediminis sp. nov. a new member of Pirellulaceae isolated from the Andaman and Nicobar Islands
P. K. Sreya, Kumar Gaurav, Shabbir Ahmed, Chintalapati Sasikala, Chintalapati Venkata Ramana
Antonie van Leeuwenhoek.2023; 116(5): 463. CrossRef
Macromonas nakdongensis sp. nov., Isolated from Freshwater and Characterization of Bacteriophage BK-30P—The First Phage That Infects Genus Macromonas
Kiwoon Baek, Ahyoung Choi
Microorganisms.2023; 11(9): 2237. CrossRef
Sphingomonas lycopersici sp. nov., isolated from tomato rhizosphere soil
Ruixiang Gao, Honghong Dong, Yang Liu, Qing Yao, Huaping Li, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Staphylococcus brunensis sp. nov. isolated from human clinical specimens with a staphylococcal cassette chromosome-related genomic island outside of the rlmH gene bearing the ccrDE r
Vojtěch Kovařovic, Adéla Finstrlová, Ivo Sedláček, Petr Petráš, Pavel Švec, Ivana Mašlaňová, Meina Neumann-Schaal, Ondrej Šedo, Tibor Botka, Eva Staňková, Jiří Doškař, Roman Pantůček, Shannon D. Manning
Microbiology Spectrum.2023;[Epub] CrossRef
The Raphidiopsis (= Cylindrospermopsis) raciborskii pangenome updated: Two new metagenome-assembled genomes from the South American clade
Marcele Laux, Carlos Morais Piroupo, João Carlos Setubal, Alessandra Giani
Harmful Algae.2023; 129: 102518. CrossRef
Marivirga aurantiaca sp. nov., a halophilic nitrite-reducing bacterium, isolated from intertidal surface sediments
Mingxia Zhang, Yulian Zhang, Qing Yao, Fan Yang, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Agromyces chromiiresistens sp. nov., Novosphingobium album sp. nov., Sphingobium arseniciresistens sp. nov., Sphingomonas pollutisoli sp. nov., and Salinibacterium metalliresistens sp. nov.: five new members of Microbacteriaceae and Sphingomonadaceae from
Ze-Shen Liu, Ke-Huan Wang, Man Cai, Mei-Ling Yang, Xiao-Kang Wang, Hong-Lin Ma, Yi-Han Yuan, Lin-Huan Wu, De-Feng Li, Shuang-Jiang Liu
Frontiers in Microbiology.2023;[Epub] CrossRef
Sphingomonas oryzagri sp. nov., isolated from a rice field
Md. Amdadul Huq, Sun-Young Lee, Md. Shahedur Rahman, Shahina Akter
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Tsuneonella litorea sp. nov., a novel carotenoid-producing bacterium isolated from coastal sediment
Yizhou He, Yang Liu, Tao Pei, Jiao Duan, Juan Du, Xiaoqin Deng, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Gramella oceanisediminis sp. nov., isolated from deep-sea sediment of the Indian Ocean
Lin Yang, Haolei Shi, Qian Li, Minggang Zheng, Qiliang Lai, Li Zheng
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Pseudomonas petrae sp. nov. isolated from regolith samples in Antarctica
Dana Nováková, Vendula Koublová, Karel Sedlář, Eva Staňková, Stanislava Králová, Pavel Švec, Meina Neumann-Schaal, Jacqueline Wolf, Sylva Koudelková, Miloš Barták, Ivo Sedláček
Systematic and Applied Microbiology.2023; 46(4): 126424. CrossRef
Paraflavisolibacter caeni gen. nov., sp. nov., a novel taxon within the family Chitinophagaceae isolated from sludge
Cansheng Yuan, Bin Liu, Lin Wang, Weihua Long, Zhuang Ke, Jian He
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Shimia ponticola sp. nov., an aerobic anoxygenic photoheterotrophic bacterium, isolated from surface seawater in the South China Sea
Qi Chen, Bowen He, Ta-Hui Lin, Nianzhi Jiao, Qiang Zheng
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
From sequences to species: Charting the phytoplasma classification and taxonomy in the era of taxogenomics
Kiran Kirdat, Bhavesh Tiwarekar, Shivaji Sathe, Amit Yadav
Frontiers in Microbiology.2023;[Epub] CrossRef
Thermobacterium salinum gen. nov., sp. nov., a novel member of the family Flavobacteriaceae isolated from a hydrothermal zone
Beihan Chen, Haichen Zhang, Dan Lin, Jianing Ye, Kai Tang
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Phenotypic and Genomic Characterization of Streptomyces pakalii sp. nov., a Novel Species with Anti-Biofilm and Anti-Quorum Sensing Activity in ESKAPE Bacteria
Michelle Chávez-Hernández, Jossue Ortiz-Álvarez, Jesús Morales-Jiménez, Lourdes Villa-Tanaca, César Hernández-Rodríguez
Microorganisms.2023; 11(10): 2551. CrossRef
Dyella humicola sp. nov., Dyella subtropica sp. nov., Dyella silvatica sp. nov. and Dyella silvae sp. nov., isolated from subtropical forest soil
Guang-Da Feng, Xiaoqin Deng, Jiali Li, Wendi Chen, Xianjiao Zhang, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Hufsiella ginkgonis gen. nov., sp. nov. and Hufsiella arboris sp. nov., isolated from tree barks
Heeyoung Kang, Seokhyeon Bae, Haneul Kim, Kiseong Joh
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Description ofDefluviimonas salinarumsp. nov. with the potential of benzene-degradation isolated from saltern in the Yellow Seacoast
Yunjeong Lee, Jong-Hwa Kim, Jung-Hoon Yoon, Jung-Sook Lee, Ampaitip Sukhoom, Wonyong Kim
FEMS Microbiology Letters.2023;[Epub] CrossRef
Genomic potential for inorganic carbon sequestration and xenobiotic degradation in marine bacterium Youngimonas vesicularis CC-AMW-ET affiliated to family Paracoccaceae
Asif Hameed, Kokkarambath Vannadil Suchithra, Shih-Yao Lin, Paul Stothard, Chiu-Chung Young
Antonie van Leeuwenhoek.2023; 116(11): 1247. CrossRef
Polyphasic Characterization and Genomic Insights into an Aerobic Denitrifying Bacterium, Shewanella zhuhaiensis sp. nov., Isolated from a Tidal Flat Sediment
Yang Liu, Tao Pei, Juan Du, Honghui Zhu
Microorganisms.2023; 11(12): 2870. CrossRef
Pseudomonas quebecensis sp. nov., a bacterium isolated from root-zone soil of a native legume, Amphicarpaea bracteata (L.) Fernald, in Quebec, Canada
James T. Tambong, Renlin Xu, Sylvia I. Chi, Isabelle Birugu, Sylvia Bachelet, Conrad Hutter, Marc-Olivier Duceppe, Stephan Brière
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Taxogenomics of Alkalihalobacterium chitinilyticum sp. nov.: an alkaliphilic chitin degrading bacterial strain isolated from Lonar Lake, India, with potential biotechnological applications
Sonia Thite, Kamakshi Tarwadge, Purva Mengade, Tushar Lodha, Neetha Joseph, Lucky Thakkar, Amaraja Joshi
Antonie van Leeuwenhoek.2023; 116(11): 1103. CrossRef
Characterization of two novel chemolithoautotrophic bacteria of Sulfurovum from marine coastal environments and further comparative genomic analyses revealed species differentiation among deep-sea hydrothermal vent and non-vent origins
Jun Wang, Qiang Zheng, Shasha Wang, Jialing Zeng, Qing Yuan, Yangsheng Zhong, Lijing Jiang, Zongze Shao
Frontiers in Marine Science.2023;[Epub] CrossRef
Pseudomonas citri sp. nov., a potential novel plant growth promoting bacterium isolated from rhizosphere soil of citrus
Hong Gao, Guang-Da Feng, Zengwei Feng, Qing Yao, Jiali Li, Xiaoqin Deng, Xiaoran Li, Honghui Zhu
Antonie van Leeuwenhoek.2023; 116(3): 281. CrossRef
Pontibacter liquoris sp. nov. and Pontibacter vulgaris sp. nov., two novel bacteria isolated from the pit mud of Chinese liquor
Chaobo Guo, Haohao Wang, Xinyu Liu, Yifan Guo, Shan He, Lijian Ding, Weiyan Zhang
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Pseudophaeobacter profundi sp. nov., isolated from the Western Pacific Ocean
Xuying Zhu, Liping Wang, Qiliang Lai, Jianning Wang, Jiamei Huang, Guangyu Li, Lingyu Zeng, Jingyu Xia, Zongze Shao
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Physiological and genomic analyses of cobalamin (vitamin B12)-auxotrophy of Lysobacter auxotrophicus sp. nov., a methionine-auxotrophic chitinolytic bacterium isolated from chitin-treated soil
Akihiro Saito, Hideo Dohra, Moriyuki Hamada, Ryota Moriuchi, Yohei Kotsuchibashi, Koji Mori
International Journal of Systematic and Evolutionary Microbiology .2023;[Epub] CrossRef
Hyperactive nanobacteria with host-dependent traits pervade Omnitrophota
Cale O. Seymour, Marike Palmer, Eric D. Becraft, Ramunas Stepanauskas, Ariel D. Friel, Frederik Schulz, Tanja Woyke, Emiley Eloe-Fadrosh, Dengxun Lai, Jian-Yu Jiao, Zheng-Shuang Hua, Lan Liu, Zheng-Han Lian, Wen-Jun Li, Maria Chuvochina, Brianna K. Finley
Nature Microbiology.2023; 8(4): 727. CrossRef
Genome-resolved metagenomics provides insights into the microbial-mediated sulfur and nitrogen cycling in temperate seagrass meadows
Pengyuan Liu, Songbao Zou, Haikun Zhang, Qing Liu, Zenglei Song, Yanyan Huang, Xiaoke Hu
Frontiers in Marine Science.2023;[Epub] CrossRef
ComammoxNitrospirabacteria outnumber canonical nitrifiers irrespective of electron donor mode and availability in biofiltration systems
Katherine J Vilardi, Irmarie Cotto, Maria Sevillano, Zihan Dai, Christopher L Anderson, Ameet Pinto
FEMS Microbiology Ecology.2022;[Epub] CrossRef
Glycoside hydrolase subfamily GH5_57 features a highly redesigned catalytic interface to process complex hetero-β-mannans
Marcele P. Martins, Mariana A. B. Morais, Gabriela F. Persinoti, Rafael H. Galinari, Li Yu, Yoshihisa Yoshimi, Fernanda B. Passos Nunes, Tatiani B. Lima, Shayla F. Barbieri, Joana L. M. Silveira, Vincent Lombard, Nicolas Terrapon, Paul Dupree, Bernard Hen
Acta Crystallographica Section D Structural Biology.2022; 78(11): 1358. CrossRef
Alexandriicola marinus gen. nov., sp. nov., a new member of the family Rhodobacteraceae isolated from marine phycosphere
Wen-Zhuo Zhu, Hui-Min Gao, Ya-Ming Ge, Jun Dai, Xi Yang, Xiao-Ling Zhang, Qiao Yang
Antonie van Leeuwenhoek.2022; 115(4): 473. CrossRef
In silico, in vitro and in vivo safety evaluation of Limosilactobacillus reuteri strains ATCC PTA-126787 & ATCC PTA-126788 for potential probiotic applications
Dharanesh Gangaiah, Shrinivasrao P. Mane, Nilesh R. Tawari, Nallakannu Lakshmanan, Valerie Ryan, Alyssa Volland, Dwi Susanti, Milind Patel, Abraham Abouzeid, Emily B. Helmes, Arvind Kumar, Konstantinos Papadimitriou
PLOS ONE.2022; 17(1): e0262663. CrossRef
Alicyclobacillus curvatus sp. nov. and Alicyclobacillus mengziensis sp. nov., two acidophilic bacteria isolated from acid mine drainage
Zhen Jiang, Dildar Wu, Zong-Lin Liang, Xiu-Tong Li, Ye Huang, Nan Zhou, Zheng-Hua Liu, Guang-Ji Zhang, Yan Jia, Hua-Qun Yin, Shuang-Jiang Liu, Cheng-Ying Jiang
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Genome-based taxonomic classification of the closest-to-Comamonadaceae group supports a new family Sphaerotilaceae fam. nov. and taxonomic revisions
Yang Liu, Juan Du, Tao Pei, Hanqin Du, Guang-Da Feng, Honghui Zhu
Systematic and Applied Microbiology.2022; 45(6): 126352. CrossRef
Paraphocaeicola brunensis gen. nov., sp. nov., Carrying Two Variants of nimB Resistance Gene from Bacteroides fragilis, and Caecibacteroides pullorum gen. nov., sp. nov., Two Novel G
Stanislava Kralova, Lenka Davidova-Gerzova, Adam Valcek, Matej Bezdicek, Ivan Rychlik, Veronika Rezacova, Alois Cizek, Jeffrey A. Gralnick
Microbiology Spectrum.2022;[Epub] CrossRef
Antrihabitans stalagmiti sp. nov., isolated from a larva cave and a proposal to transfer Rhodococcus cavernicola Lee et al. 2020 to a new genus Spelaeibacter as Spelaeibacter cavernicola gen. nov. comb. nov
Sung-Min Kim, Soon Dong Lee, Young Sang Koh, In Seop Kim
Antonie van Leeuwenhoek.2022; 115(4): 521. CrossRef
Sphingopyxis lutea sp. nov., a novel moderately halotolerant bacterium isolated from pebbles
Geeta Chhetri, Inhyup Kim, Taegun Seo
Archives of Microbiology.2022;[Epub] CrossRef
Nocardioides nematodiphilus sp. nov., isolated from rhizosphere of Arabidopsis thaliana
Xue-Mei Zhang, Wan-Ting Mo, Yu-Qian Wei, Xin Li, Gui-Mei Ma, Yu-Sen Yang, Xue-Jian Wang, Jian-Jin Liu, Zi-Yi Liu, Xing-Kui Zhou, Ti-Kun Zhang
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Sedimentimonas flavescens gen. nov., sp. nov., isolated from sediment of Clam Island, Liaoning Province
Lulu Mu, Xueping Zhang, Yanfeng Zhang, Zemin Fang, Yazhong Xiao
Antonie van Leeuwenhoek.2022; 115(8): 979. CrossRef
Pseudomonas oligotrophica sp. nov., a Novel Denitrifying Bacterium Possessing Nitrogen Removal Capability Under Low Carbon–Nitrogen Ratio Condition
Mingxia Zhang, Anzhang Li, Qing Yao, Botao Xiao, Honghui Zhu
Frontiers in Microbiology.2022;[Epub] CrossRef
Panacibacter microcysteis sp. nov., isolated from a eutrophic reservoir during the Microcystis bloom period
Ve Van Le, So-Ra Ko, Mingyeong Kang, Sang-Ah Lee, Hee-Mock Oh, Chi-Yong Ahn
Archives of Microbiology.2022;[Epub] CrossRef
Ruegeria alba sp. nov., Isolated from a Tidal Flat Sediment
Juan Du, Yang Liu, Tao Pei, Anzhang Li, Honghui Zhu
Current Microbiology.2022;[Epub] CrossRef
Larkinella humicola sp. nov., a gamma radiation-resistant bacterium isolated from soil
Yuna Park, Leonid N. Ten, Young Koung Lee, Hee‑Young Jung, Myung Kyum Kim
Archives of Microbiology.2022;[Epub] CrossRef
Oral and gut dysbiosis leads to functional alterations in Parkinson’s disease
Sungyang Jo, Woorim Kang, Yun Su Hwang, Seung Hyun Lee, Kye Won Park, Mi Sun Kim, Hyunna Lee, Hyung Jeong Yoon, Yoo Kyoung Park, Mauricio Chalita, Je Hee Lee, Hojun Sung, Jae-Yun Lee, Jin-Woo Bae, Sun Ju Chung
npj Parkinson's Disease.2022;[Epub] CrossRef
Colwellia maritima sp. nov. and Polaribacter marinus sp. nov., isolated from seawater
Sylvia Kristyanto, Jaejoon Jung, Jeong Min Kim, Keunpil Kim, Mi-hwa Lee, Lujiang Hao, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Hymenobacter translucens sp. nov. and Hymenobacter pini sp. nov. isolated from soil
Minji Bang, Myung Kyum Kim, Hee‑Young Jung
Archives of Microbiology.2022;[Epub] CrossRef
Chryseobacterium subflavum sp. nov., isolated from soil
Delong Kong, Yan Wang, Qingqing Li, Yanzheng Zhou, Xu Jiang, Zhen Xing, Zhiye Wang, Zhiyong Ruan
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Acetobacter vaccinii sp. nov., a novel acetic acid bacterium isolated from blueberry fruit (Vaccinium corymbosum L.)
Jun Heo, Atena Sadat Sombolestani, David Laureys, Jessika De Clippeleer, Miyoung Won, Peter Vandamme, Soon-Wo Kwon
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Neotabrizicola shimadae gen. nov., sp. nov., an aerobic anoxygenic phototrophic bacterium harbouring photosynthetic genes in the family Rhodobacteraceae, isolated from a terrestrial hot spring
So Muramatsu, Setsuko Hirose, Takao Iino, Moriya Ohkuma, Satoshi Hanada, Shin Haruta
Antonie van Leeuwenhoek.2022; 115(6): 731. CrossRef
Pedomonas mirosovicensis gen. nov., sp. nov., a bacterium isolated from soil with the aid of Micrococcus luteus culture supernatant containing resuscitation-promoting factor
Marco A. Lopez Marin, Jachym Suman, Kunal Jani, Pavel Ulbrich, Tomas Cajthaml, Petr Pajer, Jacqueline Wolf, Meina Neumann-Schaal, Michal Strejcek, Ondrej Uhlik
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Streptococcus oriscaviae sp. nov. Infection Associated with Guinea Pigs
Jade L. L. Teng, Yuanchao Ma, Jonathan H. K. Chen, Ruibang Luo, Chuen-Hing Foo, Tsz Tuen Li, Jordan Y. H. Fong, Weiming Yao, Samson S. Y. Wong, Kitty S. C. Fung, Susanna K. P. Lau, Patrick C. Y. Woo, Jasna Kovac
Microbiology Spectrum.2022;[Epub] CrossRef
Paracidobacterium acidisoli gen. nov., sp. nov. and Alloacidobacterium dinghuense gen. nov., sp. nov., two acidobacteria isolated from forest soil, and reclassification of Acidobacterium ailaaui and Acidipila dinghuensis as Pseudacidobacteriu
Qiu-mei Zhang, Jia-cheng Fu, Zhi-qin Chen, Li-hong Qiu
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Non‐ribosomal peptide biosynthetic potential of the nematode symbiont Photorhabdus
Ao‐Qi Du, Ti‐Ti Ying, Zhen‐Yi Zhou, Wen‐Chao Yu, Gang‐Ao Hu, Xian Luo, Man‐Jing Ma, Yan‐Lei Yu, Hong Wang, Bin Wei
Environmental Microbiology Reports.2022; 14(6): 917. CrossRef
Chryseobacterium oryzae sp. nov. and Chryseobacterium suipulveris sp. nov., isolated from Andong sikhye and pigpen dust, respectively
Jun Heo, Miyoung Won, Daseul Lee, Jeong-Seon Kim, Byeong-Hak Han, Soo-Jin Kim, Seung-Beom Hong, Soon-Wo Kwon
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Metagenomic evidence of a novel family of anammox bacteria in a subsea environment
Carolina Suarez, Paula Dalcin Martins, Mike S.M. Jetten, Sabina Karačić, Britt Marie Wilén, Oskar Modin, Per Hagelia, Malte Hermansson, Frank Persson
Environmental Microbiology.2022; 24(5): 2348. CrossRef
Evolutionary Principles of Bacterial Signaling Capacity and Complexity
Ran Mo, Yugeng Liu, Yuanyuan Chen, Yingjin Mao, Beile Gao, Qijing Zhang
mBio.2022;[Epub] CrossRef
Pseudomonas phenolilytica sp. nov., a novel phenol-degrading bacterium
Ritu Rani Archana Kujur, Subrata K. Das
Archives of Microbiology.2022;[Epub] CrossRef
Pontibacter pamirensis sp. nov., isolated from saline-alkaline soil
Fang Liu, Yang-Yang Liu, Yu-Qian Li, Rui-Feng Lei, Qin Ma, Dilireba Abudourousuli, Zulihumaer Rouzi, Muyesaier Aosiman, Deng-Di An, Wen-Jun Li
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Limosilactobacillus reuteri DS0384 promotes intestinal epithelial maturation via the postbiotic effect in human intestinal organoids and infant mice
Hana Lee, Kwang Bo Jung, Ohman Kwon, Ye Seul Son, Eunho Choi, Won Dong Yu, Naeun Son, Jun Hyoung Jeon, Hana Jo, Haneol Yang, Yeong Rak Son, Chan-Seok Yun, Hyun-Soo Cho, Sang Kyu Kim, Dae-Soo Kim, Doo-Sang Park, Mi-Young Son
Gut Microbes.2022;[Epub] CrossRef
Some like it cold: the cellular organization and physiological limits of cold‐tolerant nitrite‐oxidizing Nitrotoga
Sabine Keuter, Hanna Koch, Katharina Sass, Simone Wegen, Natuschka Lee, Sebastian Lücker, Eva Spieck
Environmental Microbiology.2022; 24(4): 2059. CrossRef
Horticoccus luteus gen. nov., sp. nov., A Novel Member of the Phylum Verrucomicrobia Isolated from a Dichlorodiphenyltrichloroethane (DDT)-Contaminated Orchard Soil
Joon-hui Chung, Ja-Yeon Lee, Geun-Hyung Choi, Miyoung Won, Jehyeong Yeon, Younggun Yoon, Si-Hyun An, Da-Yeon Kim, InCheol Park, Ye-eun Kim, Jae-Hyung Ahn
Current Microbiology.2022;[Epub] CrossRef
Burkholderia orbicola sp. nov., a novel species within the Burkholderia cepacia complex
Leslie-Mariana Morales-Ruíz, Mariana Rodríguez-Cisneros, Jeniffer-Chris Kerber-Díaz, Fernando-Uriel Rojas-Rojas, J. Antonio Ibarra, Paulina Estrada-de los Santos
Archives of Microbiology.2022;[Epub] CrossRef
Assessing the utility of mitochondrial gene markers in the family Suessiaceae (Dinophyta) with phylogenomic validation
Se Hyeon Jang, Seong In Na, Moo Joon Lee, Yeong Du Yoo
Molecular Phylogenetics and Evolution.2022; 177: 107625. CrossRef
Taxonomic and Bioactivity Characterizations of Mameliella alba Strain LZ-28 Isolated from Highly Toxic Marine Dinoflagellate Alexandrium catenella LZT09
Cheng-Zhe Ren, Hui-Min Gao, Jun Dai, Wen-Zhuo Zhu, Fei-Fei Xu, Yun Ye, Xiao-Ling Zhang, Qiao Yang
Marine Drugs.2022; 20(5): 321. CrossRef
Nocardioides panacis sp. nov., isolated from soil of a ginseng field
Yuna Park, Qingzhen Liu, Soohyun Maeng, Won Jung Choi, Yoonjee Chang, Wan-Taek Im
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Water quality drives the distribution of freshwater cable bacteria
Meijun Dong, Shan Yang, Xunan Yang, Meiying Xu, Wenzhe Hu, Bin Wang, Youda Huang, Jiarou Xu, Huibin Lu, Yonggang Yang, Xingjuan Chen, Haobin Huang, Guoping Sun
Science of The Total Environment.2022; 841: 156468. CrossRef
Vibrio ostreae sp. nov., a novel gut bacterium isolated from a Yellow Sea oyster
Neak Muhammad, Tra T.H. Nguyen, Yong-Jae Lee, Jaeho Ko, Forbes Avila, Song-Gun Kim
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Flavobacterium endoglycinae sp. nov., an endophytic bacterium isolated from soybean (Glycine max L. cv. Gwangan) stems
Jiyoon Seo, Yuxin Peng, Lingmin Jiang, Sang-Beom Lee, Rae-Dong Jeong, Soon Ju Park, Cha Young Kim, Man-Soo Choi, Jiyoung Lee
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Draft Genome Sequence of Methanobacterium paludis IBT-C12, Recovered from Sediments of the Apatlaco River, Mexico
Erick Alejandro Sánchez-Salazar, Lizbeth Hernández-Jaimes, Luz Breton-Deval, Ayixon Sánchez-Reyes, Frank J. Stewart
Microbiology Resource Announcements.2022;[Epub] CrossRef
Successful Direct Whole Genome Sequencing and Revivification of Freeze-Dried Nontuberculous Mycobacteria after More than Half a Century of Storage
Xenia Emilie Sinding Iversen, Anders Norman, Dorte Bek Folkvardsen, Erik Svensson, Erik Michael Rasmussen, Troels Lillebaek, Sébastien P. Faucher
Microbiology Spectrum.2022;[Epub] CrossRef
Bacterial filamentation as a mechanism for cell-to-cell spread within an animal host
Tuan D. Tran, Munira Aman Ali, Davin Lee, Marie-Anne Félix, Robert J. Luallen
Nature Communications.2022;[Epub] CrossRef
Greater functional diversity and redundancy of coral endolithic microbiomes align with lower coral bleaching susceptibility
Anny Cárdenas, Jean-Baptiste Raina, Claudia Pogoreutz, Nils Rädecker, Jeremy Bougoure, Paul Guagliardo, Mathieu Pernice, Christian R Voolstra
The ISME Journal.2022; 16(10): 2406. CrossRef
Comparative Genomics Reveal the Animal-Associated Features of the Acanthopleuribacteraceae Bacteria, and Description of Sulfidibacter corallicola gen. nov., sp., nov.
Guanghua Wang, Yuanjin Li, Jianfeng Liu, Biao Chen, Hongfei Su, Jiayuan Liang, Wen Huang, Kefu Yu
Frontiers in Microbiology.2022;[Epub] CrossRef
Dyella sedimenti sp. nov., Isolated from the Sediment of a Winery
Li Gao, Yuan-Dong Li, Xing-Kui Zhou, Xiu-Ming Liu, Hui-Tian Li, Wen-Jun Li, Yan-Qing Duan
Current Microbiology.2022;[Epub] CrossRef
Arenibacterium arenosum sp. nov., isolated from sea sand
Jiseon Jeong, Veeraya Weerawongwiwat, Jong-Hwa Kim, Min Kuk Suh, Han Sol Kim, Jung-Sook Lee, Jung-Hoon Yoon, Ampaitip Sukhoom, Wonyong Kim
Archives of Microbiology.2022;[Epub] CrossRef
Gordonia pseudamarae sp. nov., a home for novel actinobacteria isolated from stable foams on activated sludge wastewater treatment plants
Raúl Riesco, Jayson J. A. Rose, Steven Batinovic, Steve Petrovski, Fernando Sánchez-Juanes, Robert J. Seviour, Michael Goodfellow, Martha E. Trujillo
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Predicting butyrate- and propionate-forming bacteria of gut microbiota from sequencing data
Berenike Kircher, Sabrina Woltemate, Frank Gutzki, Dirk Schlüter, Robert Geffers, Heike Bähre, Marius Vital
Gut Microbes.2022;[Epub] CrossRef
Kaistella soli sp. nov., isolated from oil-contaminated experimental soil
Dhiraj Kumar Chaudhary, Ram Hari Dahal, Joung-Ho Park, Yongseok Hong
Archives of Microbiology.2022;[Epub] CrossRef
Halomonas salinarum sp. nov., a moderately halophilic bacterium isolated from saline soil in Yingkou, China
Ya-Lin Yin, Fang-Ling Li, Lei Wang
Archives of Microbiology.2022;[Epub] CrossRef
Neoroseomonas marina sp. nov., Isolated from a Beach Sand
Anusha Rai, Jagadeeshwari Uppada, Deepshikha Gupta, Smita Nandardhane, Ipsita Sahu, Sasikala Chintalapati, Venkata Ramana Chintalapati
Current Microbiology.2022;[Epub] CrossRef
Paenibacillus albicereus sp. nov. and Niallia alba sp. nov., isolated from digestive syrup
Vipool Thorat, Kiran Kirdat, Bhavesh Tiwarekar, Priyanka Dhanavade, Prachi Karodi, Yogesh Shouche, Shivaji Sathe, Tushar Lodha, Amit Yadav
Archives of Microbiology.2022;[Epub] CrossRef
Identification of Mucilaginibacter conchicola sp. nov., Mucilaginibacter achroorhodeus sp. nov. and Mucilaginibacter pallidiroseus sp. nov. and emended description of the genus Mucilaginibacter
Jiyoun Kim, Byungjo Lee, Geeta Chhetri, Inhyup Kim, Yoonseop So, Wonhee Jang, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Pusillimonas faecipullorum sp. nov., isolated from the poultry manure
Shih-Yao Lin, Asif Hameed, Chia-Fang Tsai, Yu-Shan Tang, Chiu-Chung Young
Archives of Microbiology.2022;[Epub] CrossRef
Unveiling the genomic potential of Pseudomonas type strains for discovering new natural products
Zaki Saati-Santamaría, Nelly Selem-Mojica, Ezequiel Peral-Aranega, Raúl Rivas, Paula García-Fraile
Microbial Genomics .2022;[Epub] CrossRef
A genomic overview including polyphasic taxonomy of Thalassoroseus pseudoceratinae gen. nov., sp. nov. isolated from a marine sponge, Pseudoceratina sp.
Gaurav Kumar, Uppada Jagadeeshwari, Pannikurungottu Sreya, Ahmed Shabbir, Chintalapati Sasikala, Chintalapati Venkata Ramana
Antonie van Leeuwenhoek.2022; 115(7): 843. CrossRef
Novosphingobium percolationis sp. nov. and Novosphingobium huizhouense sp. nov., isolated from landfill leachate of a domestic waste treatment plant
Xiaoling He, Huibin Lu, Wenzhe Hu, Tongchu Deng, Xiaofan Gong, Xunan Yang, Da Song, Mei He, Meiying Xu
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Development of a Novel Real-Time Polymerase Chain Reaction Assay to DetectEscherichia albertiiin Chicken Meat
Sakura Arai, Tadasuke Ooka, Mizuha Shibata, Yuhki Nagai, Yuki Tokoi, Hiromi Nagaoka, Rika Maeda, Akihiko Tsuchiya, Yuka Kojima, Kenji Ohya, Takahiro Ohnishi, Noriko Konishi, Kayoko Ohtsuka, Yukiko Hara-Kudo
Foodborne Pathogens and Disease.2022; 19(12): 823. CrossRef
Psychroflexus curvus sp. nov., Psychroflexus longus sp. nov. and Psychroflexus montanilacus sp. nov., isolated from salt lakes on the Tibetan Plateau
Huibin Lu, Peixin Gao, Dorji Phurbu, Qinglong Wu, Peng Xing
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Tumebacillus amylolyticus sp. nov., isolated from garden soil in Korea
Minchung Kang, Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Yoonseop So, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Description of Polaribacter batillariae sp. nov., Polaribacter cellanae sp. nov., and Polaribacter pectinis sp. nov., novel bacteria isolated from the gut of three types of South Korean shellfish
Su-Won Jeong, Jeong Eun Han, June-Young Lee, Ji-Ho Yoo, Do-Yeon Kim, In Chul Jeong, Jee-Won Choi, Yun-Seok Jeong, Jae-Yun Lee, So-Yeon Lee, Euon Jung Tak, Hojun Sung, Hyun Sik Kim, Pil Soo Kim, Dong-Wook Hyun, Jin-Woo Bae
Journal of Microbiology.2022; 60(6): 576. CrossRef
Survival strategy of comammox bacteria in a wastewater nutrient removal system with sludge fermentation liquid as additional carbon source
Shaoyi Xu, Wenbo Chai, Rui Xiao, Barth F. Smets, Alejandro Palomo, Huijie Lu
Science of The Total Environment.2022; 802: 149862. CrossRef
Hymenobacter armeniacus sp. nov. and Hymenobacter montanus sp. nov., two radiation-resistant bacteria from soil
Yuna Park, Yoonjee Chang, Myung Kyum Kim
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Hymenobacter telluris sp. nov., isolated from soil in South Korea
Tuvshinzaya Damdintogtokh, Yuna Park, Soohyun Maeng, Hye Jin Oh, Minji Bang, Young Koung Lee, Jaesung Oh, Jaewoo Bai, Myung Kyum Kim
Archives of Microbiology.2022;[Epub] CrossRef
Ferruginibacter albus sp. nov., isolated from a mountain soil, and Mucilaginibacter robiniae sp. nov., isolated from a black locust flower, Robinia pseudoacacia
Miyoung Won, Hang-Yeon Weon, Jun Heo, Daseul Lee, Byeong-Hak Han, Seung-Beom Hong, Soon-Wo Kwon
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Beyond the ABCs—Discovery of Three New Plasmid Types in Rhodobacterales (RepQ, RepY, RepW)
Heike M. Freese, Victoria Ringel, Jörg Overmann, Jörn Petersen
Microorganisms.2022; 10(4): 738. CrossRef
Comparative Genomic Analyses of the Genus Photobacterium Illuminate Biosynthetic Gene Clusters Associated with Antagonism
Nyok-Sean Lau, Wooi Liang Heng, Noorizan Miswan, Nor Azura Azami, Go Furusawa
International Journal of Molecular Sciences.2022; 23(17): 9712. CrossRef
Comparative Genomic Analysis of Fusobacterium necrophorum Provides Insights into Conserved Virulence Genes
Prabha K. Bista, Deepti Pillai, Chayan Roy, Joy Scaria, Sanjeev K. Narayanan, Philip N. Rather
Microbiology Spectrum.2022;[Epub] CrossRef
Shewanella sp. T2.3D-1.1 a Novel Microorganism Sustaining the Iron Cycle in the Deep Subsurface of the Iberian Pyrite Belt
Guillermo Mateos, Adrián Martínez Bonilla, Sofía de Francisco de Polanco, José M. Martínez, Cristina Escudero, Nuria Rodríguez, Irene Sánchez-Andrea, Ricardo Amils
Microorganisms.2022; 10(8): 1585. CrossRef
Devosia rhizoryzae sp. nov., and Devosia oryziradicis sp. nov., novel plant growth promoting members of the genus Devosia, isolated from the rhizosphere of rice plants
Geeta Chhetri, Inhyup Kim, Minchung Kang, Jiyoun Kim, Yoonseop So, Taegun Seo
Journal of Microbiology.2022; 60(1): 1. CrossRef
Nocardioides carbamazepini sp. nov., an ibuprofen degrader isolated from a biofilm bacterial community enriched on carbamazepine
Tibor Benedek, Márton Pápai, Kholood Gharieb, Anna Bedics, András Táncsics, Erika Tóth, Hussein Daood, Gergely Maróti, Roland Wirth, Ofir Menashe, Károly Bóka, Balázs Kriszt
Systematic and Applied Microbiology.2022; 45(4): 126339. CrossRef
Agrilactobacillus fermenti sp. nov. isolated from fermented vegetable residue
Shih-Yao Lin, Asif Hameed, Chia-Fang Tsai, Mei-Hua Hung, Chiu-Chung Young
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Genomic Insights into the Radiation-Resistant Capability of Sphingomonas qomolangmaensis S5-59T and Sphingomonas glaciei S8-45T, Two Novel Bacteria from the North Slope of Mount Everest
Yang Liu, Xiaowen Cui, Ruiqi Yang, Yiyang Zhang, Yeteng Xu, Guangxiu Liu, Binglin Zhang, Jinxiu Wang, Xinyue Wang, Wei Zhang, Tuo Chen, Gaosen Zhang
Microorganisms.2022; 10(10): 2037. CrossRef
In silico, in vitro and in vivo characterization of host-associated Latilactobacillus curvatus strains for potential probiotic applications in farmed Atlantic salmon (Salmo salar)
Hannah S. Cathers, Shrinivasrao P. Mane, Nilesh R. Tawari, Jayanth Balakuntla, Germán Plata, Madan Krishnamurthy, Alicia MacDonald, Marilyn Wolter, Niel Baxter, Julian Briones, Akshitha Nagireddy, Gregory Millman, Roberto E. Martin, Arvind Kumar, Dharanes
Scientific Reports.2022;[Epub] CrossRef
Rahnella sikkimica sp. nov., a novel cold-tolerant bacterium isolated from the glacier of Sikkim Himalaya with plant growth-promoting properties
Anil Kumar, Anne Le Flèche-Matéos, Rakshak Kumar, Fabienne Lomprez, Frédéric Fichenick, Dharam Singh, Patrick A. D. Grimont, Sanjay Kumar
Extremophiles.2022;[Epub] CrossRef
Hydrogenophaga crocea sp. nov. associated with cyanobacterial mat isolated from farmland mud
Vipool Thorat, Bhavesh Tiwarekar, Kiran Kirdat, Saurabhee Chavan, Shital Markad, Shivaji Sathe, Tushar Lodha, Amit Yadav
Archives of Microbiology.2022;[Epub] CrossRef
Genome mining revealed polyhydroxybutyrate biosynthesis by Ramlibacter agri sp. nov., isolated from agriculture soil in Korea
Ram Hari Dahal, Jungmin Kim, Dhiraj Kumar Chaudhary, Thi Tuyet Nhan Le, Dong-Uk Kim, Hyein Jang, Jaisoo Kim
Antonie van Leeuwenhoek.2022; 115(5): 563. CrossRef
Aestuarium zhoushanense is a later heterotypic synonym of Marivivens donghaensis, and transfer of Paradonghicola geojensis to the genus Marivivens as Marivivens geojensis comb. nov
Luxuan Qu, Yating Li, Wanpeng Wang, Zongze Shao, Zheng Gao, Qiliang Lai
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Lysobacter chinensis sp. nov., a cellulose-degrading strain isolated from cow dung compost
Yuyue Liu, Liuyan Zhou, Xinping Yang, Pengbin Li, Jinping Dai, Yuqing Xie, Xiaowu Wang, Zhifang Wang, Zhanqiang Su, Lei Feng
Antonie van Leeuwenhoek.2022; 115(8): 1031. CrossRef
Quadrisphaera setariae sp. nov., polyphosphate-accumulating bacterium occurring as tetrad or aggregate cocci and isolated from Setaria viridis
Inhyup Kim, Geeta Chhetri, Jiyoun Kim, Yoonseop So, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Thauera sedimentorum sp. nov., Isolated from Coastal Sediment
Jihye Baek, Nattira Jaikwang, Jong-Hwa Kim, Jung-Hoon Yoon, Jung-Sook Lee, Ampaitip Sukhoom, Wonyong Kim
Current Microbiology.2022;[Epub] CrossRef
Description of Deefgea piscis sp. nov., and Deefgea tanakiae sp. nov., isolated from the gut of Korean indigenous fish
Do-Hun Gim, So-Yeon Lee, Jeong Eun Han, Jae-Yun Lee, Seo Min Kang, Jin-Woo Bae
Journal of Microbiology.2022; 60(11): 1061. CrossRef
Flavobacterium proteolyticum sp. nov., isolated from aquaculture water
Juan Du, Yang Liu, Tao Pei, Anzhang Li, Ming-Rong Deng, Honghui Zhu
Archives of Microbiology.2022;[Epub] CrossRef
Paracoccus everestensis sp. nov., a novel bacterium with great antioxidant capacity isolated from the north slope of Mount Everest
Xiaowen Cui, Yang Liu, Yajie Xu, Tuo Chen, Songlin Zhang, Jinxiu Wang, Ruiqi Yang, Guangxiu Liu, Wei Zhang, Gaosen Zhang
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
[Retracted] Assembly of 97 Novel Bacterial Genomes in the Microbial Community Affiliated with Polyvinyl Alcohol in Soil of Northern China
Jiaxing Liu, Xun Gu, Hui Li, Yu-Hang Zhang
BioMed Research International.2022;[Epub] CrossRef
Comparative Genomics Reveals Genetic Diversity and Metabolic Potentials of the Genus Qipengyuania and Suggests Fifteen Novel Species
Yang Liu, Tao Pei, Juan Du, Qing Yao, Ming-Rong Deng, Honghui Zhu, Gaurav Sharma, Feng Cai, Xuewei Xu
Microbiology Spectrum.2022;[Epub] CrossRef
Sagittula salina sp. nov., isolated from marine waste
Leila Satari, Esther Molina-Menor, Àngela Vidal-Verdú, Javier Pascual, Juli Peretó, Manuel Porcar
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Pseudophaeobacter flagellatus sp. nov., isolated from coastal water
Yong Guan, Yue Jiang, Young-Min Kim, Seung Yeob Yu, Seung-Hyeon Choi, Hanna Choe, Zhun Li, Mi-Kyung Lee
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Thalassococcus arenae sp. nov. isolated from sea sand
Veeraya Weerawongwiwat, Jong-Hwa Kim, Jung-Sook Lee, Jung-Hoon Yoon, Ampaitip Sukhoom, Wonyong Kim
Archives of Microbiology.2022;[Epub] CrossRef
Microaerobic enrichment of benzene-degrading bacteria and description of Ideonella benzenivorans sp. nov., capable of degrading benzene, toluene and ethylbenzene under microaerobic conditions
Anna Bedics, András Táncsics, Erika Tóth, Sinchan Banerjee, Péter Harkai, Balázs Kovács, Károly Bóka, Balázs Kriszt
Antonie van Leeuwenhoek.2022; 115(9): 1113. CrossRef
Hymenobacter lucidus sp. nov., and Hymenobacter nitidus sp. nov., isolated from soil
Hyejin Oh, Hyang Burm Lee, Myung Kyum Kim
Archives of Microbiology.2022;[Epub] CrossRef
Natronococcus pandeyae sp. nov., a Novel Haloarchaeon from Sambhar Salt Lake
Swapnil Kajale, Neelima Deshpande, Tushar Lodha, Yogesh Shouche, Avinash Sharma
Current Microbiology.2022;[Epub] CrossRef
Parachryseolinea silvisoli gen. nov., sp. nov., isolated from forest soil, and reclassification of Chryseolinea flava as Pseudochryseolinea flava gen. nov., comb. nov.
Chunling Wang, Yingying Lv, Anzhang Li, Qing Yao, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Whole genome sequencing of the halophilic Halomonas qaidamensis XH36, a novel species strain with high ectoine production
Tiantian Zhang, Tianqi Cui, Yaning Cao, Yongzhen Li, Fenghui Li, Derui Zhu, Jiangwa Xing
Antonie van Leeuwenhoek.2022; 115(4): 545. CrossRef
Draft Genome Sequence of Labrys okinawensis, Isolated from Acaciella sp. Nodules in Mexico
Belén Chávez-Ramírez, Violeta Larios-Serrato, Paulina Estrada-de los Santos, Leighton Pritchard
Microbiology Resource Announcements.2022;[Epub] CrossRef
Sporosarcina jiandibaonis sp. nov., isolated from saline soil
Delong Kong, Zhanfeng Xia, Yan Gao, Yiqing Zhou, Xu Jiang, Piao Xu, Wei Guo, Zhiyong Ruan
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Niabella agricola sp. nov., isolated from paddy soil
Shih-Yao Lin, Chia-Fang Tsai, Asif Hameed, Tzung-Han Lee, Chiu-Chung Young
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Description of Corynebacterium poyangense sp. nov., isolated from the feces of the greater white-fronted geese (Anser albifrons)
Qian Liu, Guoying Fan, Kui Wu, Xiangning Bai, Xi Yang, Wentao Song, Shengen Chen, Yanwen Xiong, Haiying Chen
Journal of Microbiology.2022; 60(7): 668. CrossRef
Paludisphaera rhizosphaereae sp. nov., a new member of the family Isosphaeraceae, isolated from the rhizosphere soil of Erianthus ravennae
Khongsai L. Lhingjakim, Nandardhane Smita, Gaurav Kumar, Uppada Jagadeeshwari, Shabbir Ahamad, Chintalapati Sasikala, Chintalapati Venkata Ramana
Antonie van Leeuwenhoek.2022; 115(8): 1073. CrossRef
Fibrella aquatilis sp. nov., Fibrella rubiginis sp. nov. and Fibrella forsythiae sp. nov., isolated from freshwater, rusty iron and forsythia flower
Heeyoung Kang, Haneul Kim, Seokhyeon Bae, Kiseong Joh
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Corallococcus silvisoli sp. nov., a novel myxobacterium isolated from subtropical forest soil
Xian-Jiao Zhang, Guang-Da Feng, Yang Liu, Yang Zhou, Xiaoqin Deng, Qing Yao, Honghui Zhu
Archives of Microbiology.2022;[Epub] CrossRef
Fundicoccus fermenti sp. nov., an indigo-reducing facultative anaerobic alkaliphile isolated from indigo fermentation liquor used for dyeing
Zhihao Tu, Helena de Fátima Silva Lopes, Isao Yumoto
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Lignin-Oxidizing Vibrios Involved in the Mineralization of Plant Detritus in the Continental Slope
Jianyang Li, Chunming Dong, Biswarup Sen, Qiliang Lai, Linfeng Gong, Guangyi Wang, Zongze Shao
SSRN Electronic Journal .2022;[Epub] CrossRef
Mapping Strengths and Weaknesses of Different Clustering Approaches to Deciphering Bacterial Chimerism
David J. Burks, Rajeev K. Azad
OMICS: A Journal of Integrative Biology.2022; 26(8): 422. CrossRef
Unraveling Nitrogen, Sulfur, and Carbon Metabolic Pathways and Microbial Community Transcriptional Responses to Substrate Deprivation and Toxicity Stresses in a Bioreactor Mimicking Anoxic Brackish Coastal Sediment Conditions
Paula Dalcin Martins, Maider J. Echeveste Medrano, Arslan Arshad, Julia M. Kurth, Heleen T. Ouboter, Huub J. M. Op den Camp, Mike S. M. Jetten, Cornelia U. Welte
Frontiers in Microbiology.2022;[Epub] CrossRef
Rhizobium setariae sp. nov., an Indole-3-Acetic Acid-Producing Bacterium Isolated from Green Foxtail, Setaria viridis
Minchung Kang, Taegun Seo
Current Microbiology.2022;[Epub] CrossRef
Description of Flavobacterium cyclinae sp. nov. and Flavobacterium channae sp. nov., isolated from the intestines of Cyclina sinensis (Corb shell) and Channa argus (Northern snakehead)
Seomin Kang, Jae-Yun Lee, Jeong Eun Han, Yun-Seok Jeong, Do-Hun Gim, Jin-Woo Bae
Journal of Microbiology.2022; 60(9): 890. CrossRef
Paenibacillus arenosi sp. nov., a siderophore-producing bacterium isolated from coastal sediment
Jihye Baek, Veeraya Weerawongwiwat, Jong-Hwa Kim, Jung-Hoon Yoon, Jung-Sook Lee, Ampaitip Sukhoom, Wonyong Kim
Archives of Microbiology.2022;[Epub] CrossRef
Vagococcus allomyrinae sp. nov. and Enterococcus larvae sp. nov., isolated from larvae of Allomyrina dichotoma
Sung-Min Kim, Yeong-Sik Byeon, Hong Lim Yang, In Seop Kim, Soon Dong Lee
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Staphylococcus ratti sp. nov. Isolated from a Lab Rat
Vojtěch Kovařovic, Ivo Sedláček, Petr Petráš, Stanislava Králová, Ivana Mašlaňová, Pavel Švec, Meina Neumann-Schaal, Tibor Botka, Tereza Gelbíčová, Eva Staňková, Jiří Doškař, Roman Pantůček
Pathogens.2022; 11(1): 51. CrossRef
Mucilaginibacter rivuli sp. nov., isolated from a water rivulet
Seokhyeon Bae, Heeyoung Kang, Haneul Kim, Kiseong Joh
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
A Novel Alteromonas Phage Lineage with a Broad Host Range and Small Burst Size
Yahui Yang, Ruijie Ma, Chen Yu, Junlei Ye, Xiaowei Chen, Long Wang, Nianzhi Jiao, Rui Zhang, Wei-Hua Chen
Microbiology Spectrum.2022;[Epub] CrossRef
Muricauda aurea sp. nov. and Muricauda profundi sp. nov., two marine bacteria isolated from deep sea sediment of Pacific Ocean
Sufang Zhao, Renju Liu, Qiliang Lai, Zongze Shao
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Lysobacter ciconiae sp. nov., and Lysobacter avium sp. nov., isolated from the faeces of an Oriental stork
So-Yeon Lee, Pil Soo Kim, Hojun Sung, Dong-Wook Hyun, Jin-Woo Bae
Journal of Microbiology.2022; 60(5): 469. CrossRef
Culturomics of Bacteria from Radon-Saturated Water of the World’s Oldest Radium Mine
Gabriela Kapinusova, Kunal Jani, Tereza Smrhova, Petr Pajer, Irena Jarosova, Jachym Suman, Michal Strejcek, Ondrej Uhlik, Jing Han
Microbiology Spectrum.2022;[Epub] CrossRef
Pseudomonas germanica sp. nov., isolated from Iris germanica rhizomes
Kostadin Evgeniev Atanasov, David Miñana Galbis, Julia Gallego, Annabel Serpico, Montserrat Bosch, Teresa Altabella, Albert Ferrer
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Cohnella herbarum sp. nov., isolated from wild grass fermentation broth
Miyoung Won, Shin Ae Lee, Seung-Beom Hong, Byeong-Hak Han, Soon-Wo Kwon
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Description of Prasinibacter corallicola gen. nov., sp. nov., a zeaxanthin-producing bacterium isolated from stony coral Porites lutea
Guanghua Wang, Jianfeng Liu, Yuanjin Li, Jin Li, Jixin Luo, Biao Chen, Zhiheng Liao, Hongfei Su, Jiayuan Liang, Kefu Yu
Antonie van Leeuwenhoek.2022; 115(7): 933. CrossRef
Phylogenomic analysis of a metagenome-assembled genome indicates a new taxon of an anoxygenic phototroph bacterium in the family Chromatiaceae and the proposal of “Candidatus Thioaporhodococcus” gen. nov
Bakshi Amulyasai, Rai Anusha, Chintalapati Sasikala, Chintalapati Venkata Ramana
Archives of Microbiology.2022;[Epub] CrossRef
Mucilaginibacter aurantiaciroseus sp. nov. and Mucilaginibacter flavidus sp. nov., isolated from Renlongba glacier on the Tibetan Plateau
Lei-Lei Yang, Yu Pang, Hong-Can Liu, Yu-Hua Xin, Qing Liu
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Aeromicrobium stalagmiti sp. nov., isolated from a lava cave
Yeong-Sik Byeon, Sung-Min Kim, Hong Lim Yang, In Seop Kim, Soon Dong Lee
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Halorubrum salinarum sp. nov., an extremely halophilic archaeon isolated from a saturated brine pond of a saltern
Ho Le Han, Reneelyn E. Danganan, Zhun Li, Na-Ri Shin, Reuel M. Bennett, Gina R. Dedeles, Song-Gun Kim
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Sulfuriroseicoccus oceanibius gen. nov., sp. nov., a representative of the phylum Verrucomicrobia with a special cytoplasmic membrane
Xi Feng, Qi-Yun Liang, Qi-Hang Zou, Meng-Qi Ye, Zong-Jun Du
Antonie van Leeuwenhoek.2022; 115(2): 337. CrossRef
Sediminibacillus dalangtanensis sp. nov., a moderate halophile isolated from hypersaline sediments of the Qaidam Basin in Northwest China
Ting Huang, Qiliang Lai, Long Xiao, Linfeng Gong, Zongze Shao, Hongmei Wang, Yi Xu, Ricardo Amils, Cristina Escudero, José M. Martinez
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Croceicoccus hydrothermalis sp. nov., isolated from shallow-sea hydrothermal system off Kueishantao Island
Beihan Chen, Youting Ye, Dan Lin, Mu Zhang, Jia Sun, Kai Tang
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Deciphering Genomes: Genetic Signatures of Plant-Associated Micromonospora
Raúl Riesco, Maite Ortúzar, José Manuel Fernández-Ábalos, Martha E. Trujillo
Frontiers in Plant Science.2022;[Epub] CrossRef
Erwinia phyllosphaerae sp. nov., a novel bacterium isolated from phyllosphere of pomelo (Citrus maxima)
Ming-Kai Pan, Guang-Da Feng, Qing Yao, Jiali Li, Chenjian Liu, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Capillimicrobium parvum gen. nov., sp. nov., a novel representative of Capillimicrobiaceae fam. nov. within the order Solirubrobacterales, isolated from a grassland soil
Selma Vieira, Katharina J. Huber, Alicia Geppert, Jacqueline Wolf, Meina Neumann-Schaal, Manja Luckner, Gerhard Wanner, Mathias Müsken, Jörg Overmann
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Salegentibacter lacus sp. nov. and Salegentibacter tibetensis sp. nov., isolated from hypersaline lakes on the Tibetan Plateau
Huibin Lu, Peixin Gao, Dorji Phurbu, Qinglong L. Wu, Peng Xing
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Sphingomonas cannabina sp. nov., isolated from Cannabis sativa L. ‘Cheungsam’
Doeun Jeon, Lingmin Jiang, Yuxin Peng, Jiyoon Seo, Zhun Li, Seung-Hwan Park, Rae-Dong Jeong, Soon Ju Park, Jae Cheol Jeong, Jiyoung Lee
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Ideonella alba sp. nov. and Ideonella aquatica sp. nov. isolated from an aquaculture farm
Juan Du, Yang Liu, Tao Pei, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Gottfriedia endophyticus sp. nov., a novel indole-acetic acid producing bacterium isolated from the roots of rice plant
Geeta Chhetri, Inhyup Kim, Taegun Seo
Antonie van Leeuwenhoek.2022; 115(7): 943. CrossRef
Gut microbiome of the largest living rodent harbors unprecedented enzymatic systems to degrade plant polysaccharides
Lucelia Cabral, Gabriela F. Persinoti, Douglas A. A. Paixão, Marcele P. Martins, Mariana A. B. Morais, Mariana Chinaglia, Mariane N. Domingues, Mauricio L. Sforca, Renan A. S. Pirolla, Wesley C. Generoso, Clelton A. Santos, Lucas F. Maciel, Nicolas Terrap
Nature Communications.2022;[Epub] CrossRef
Aggregatimonas sangjinii gen. nov., sp. nov., a novel silver nanoparticle synthesizing bacterium belonging to the family Flavobacteriaceae
Dawoon Chung, Jaejoon Jung, Jaoon Young Hwan Kim, Kyung Woo Kim, Yong Min Kwon
Antonie van Leeuwenhoek.2022; 115(2): 325. CrossRef
Comparative genomic analyses of four novel Ramlibacter species and the cellulose-degrading properties of Ramlibacter cellulosilyticus sp. nov.
Minchung Kang, Geeta Chhetri, Inhyup Kim, Yoonseop So, Taegun Seo
Scientific Reports.2022;[Epub] CrossRef
Cellulosimicrobium protaetiae sp. nov., isolated from the gut of the larva of Protaetia brevitarsis seulensis
Ho Le Han, Tra T. H. Nguyen, Zhun Li, Na-Ri Shin, Song-Gun Kim
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Prokaryotes of renowned Karlovy Vary (Carlsbad) thermal springs: phylogenetic and cultivation analysis
Tereza Smrhova, Kunal Jani, Petr Pajer, Gabriela Kapinusova, Tomas Vylita, Jachym Suman, Michal Strejcek, Ondrej Uhlik
Environmental Microbiome.2022;[Epub] CrossRef
Draft Genome Sequences of the Kocuria subflava Type Strain KCTC 39547 and Kocuria sp. Strain JC486, a Newly Isolated Strain from a Wild Ass Sanctuary in Gujarat, India
Jagadeeshwari Uppada, Sasikala Chintalapati, Karthika K, Venkata Ramana Chintapati, J. Cameron Thrash
Microbiology Resource Announcements.2022;[Epub] CrossRef
Cellulomonas fulva sp. nov., isolated from oil-contaminated soil
Ram Hari Dahal, Jungmin Kim, Dong-Uk Kim, Ke Dong, Yongseok Hong, Dhiraj Kumar Chaudhary
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Hymenobacter piscis sp. nov., isolated from a fish pond
Shih-Yi Sheu, Che-Chia Yang, Soon-Wo Kwon, Wen-Ming Chen
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Corynebacterium uberis sp. nov. frequently isolated from bovine mastitis
Sonja Kittl, Eveline Studer, Isabelle Brodard, Andreas Thomann, Jörg Jores
Systematic and Applied Microbiology.2022; 45(4): 126325. CrossRef
Spiractinospora alimapuensis gen. nov., sp. nov., isolated from marine sediment of Valparaíso Bay (Chile) and proposal for reclassification of two species of the genus Nocardiopsis
Fernanda P. Claverías, Néstor Serna-Cardona, Andrés Cumsille, Leonardo Zamora-Leiva, Raúl Riesco, Eduardo Couve, Martha E. Trujillo, Beatriz Cámara
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Microvirga splendida sp. nov., bacteria isolated from soil
Yuna Park, Soohyun Maeng, Tuvshinzaya Damdintogtokh, Hyejin Oh, Minji Bang, Jaewoo Bai, Myung Kyum Kim
Antonie van Leeuwenhoek.2022; 115(6): 741. CrossRef
Genome analysis of Pseudomonas species reveals that Pseudomonas panacis Park et al. 2005 is a later heterotypic synonym of Pseudomonas marginalis (Brown 1918) Stevens 1925 (Approved Lists 1980)
Ritu Rani Archana Kujur, Sushanta Deb, Subrata K. Das
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Halomonas antri sp. nov., a carotenoid-producing bacterium isolated from surface seawater
Yoonseop So, Geeta Chhetri, Inhyup Kim, Minchung Kang, Jiyoun Kim, Byungjo Lee, Wonhee Jang, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Parvicella tangerina gen. nov., sp. nov. (Parvicellaceae fam. nov., Flavobacteriales), first cultured representative of the marine clade UBA10066, and Lysobacter luteus sp. nov., from activated sludge of a seawater-processing wastewater treat
Teresa Lucena, Olga Sánchez, Isabel Sanz-Saez, Silvia G. Acinas, Laura Garrido, Jordi Mas, M. Carmen Macián, María A. Ruvira, David R. Arahal, María J. Pujalte
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Sphingomonas folii sp. nov., Sphingomonas citri sp. nov. and Sphingomonas citricola sp. nov., isolated from citrus phyllosphere
Guang-Da Feng, Jiali Li, Mingkai Pan, Xiaoqin Deng, Meng Chen, Qing Yao, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Frequent Occurrence and Metabolic Versatility of Marinifilaceae Bacteria as Key Players in Organic Matter Mineralization in Global Deep Seas
Jianyang Li, Chunming Dong, Qiliang Lai, Guangyi Wang, Zongze Shao, Thomas J. Sharpton
mSystems.2022;[Epub] CrossRef
Tenebrionicola larvae gen. nov., sp. nov., isolated from larvae of mealworm Tenebrio molitor L., and a proposal to transfer Erwinia teleogrylli Liu et al. 2016 to a new genus Entomohabitans as Entomohabitans teleogrylli comb. nov.
Soon Dong Lee, Seong-Min Kim, Yeong-Sik Byeon, Hong Lim Yang, Soo Hong Chang, In Seop Kim
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Sessilibacter corallicola gen. nov., sp. nov., a sessile bacterium isolated from coral Porites lutea
Jianfeng Liu, Jin Li, Jixin Luo, Yuanjin Li, Zian Yang, Chengli Huang, Feilong Sun, Guanghua Wang
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Moraxella tetraodonis sp. nov., isolated from freshwater pufferfish (Tetraodon cutcutia) skin
Lipika Das, Subrata K. Das
Archives of Microbiology.2022;[Epub] CrossRef
Sulfurimonas marina sp. nov., an obligately chemolithoautotrophic, sulphur-oxidizing bacterium isolated from a deep-sea sediment sample from the South China Sea
Zhaodi Wang, Shasha Wang, Qiliang Lai, Shiping Wei, Lijing Jiang, Zongze Shao
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Genome-based reclassification of Azospirillum brasilense Az39 as the type strain of Azospirillum argentinense sp. nov.
Natália dos Santos Ferreira, Anahí Coniglio, Mariana Puente, Fernando Hayashi Sant’Anna, Guillermo Maroniche, Julia García, Romina Molina, Sofia Nievas, Camila Gazolla Volpiano, Adriana Ambrosini, Luciane M. P. Passaglia, Raul O. Pedraza, Verônica Massena
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Genome-based, phenotypic and chemotaxonomic classification of Faecalibacterium strains: proposal of three novel species Faecalibacterium duncaniae sp. nov., Faecalibacterium hattorii sp. nov. and Faecalibacterium gallinarum sp. nov.
Mitsuo Sakamoto, Naomi Sakurai, Hiroki Tanno, Takao Iino, Moriya Ohkuma, Akihito Endo
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Bradyrhizobium altum sp. nov., Bradyrhizobium oropedii sp. nov. and Bradyrhizobium acaciae sp. nov. from South Africa show locally restricted and pantropical nodA phylogeographic patterns
Juanita R. Avontuur, Marike Palmer, Chrizelle W. Beukes, Wai Y. Chan, Taponeswa Tasiya, Elritha van Zyl, Martin P.A. Coetzee, Tomasz Stepkowski, Stephanus N. Venter, Emma T. Steenkamp
Molecular Phylogenetics and Evolution.2022; 167: 107338. CrossRef
Azospirillum tabaci sp. nov., a bacterium isolated from rhizosphere soil of Nicotiana tabacum L
Yan-Qing Duan, Xing-Kui Zhou, Neeli Habib, Shi-Qiang Gao, Li-Min Dong, Xiao-Fei Liu, Yang-Mei Shi, Wen-Jun Li, Gang Du
Archives of Microbiology.2022;[Epub] CrossRef
Cecal Microbial Hydrogen Cycling Potential Is Linked to Feed Efficiency Phenotypes in Chickens
Gustavo Antonio Ramírez, Jitendra Keshri, Isabella Vahrson, Arkadiy I. Garber, Mark E. Berrang, Nelson A. Cox, Fernando González-Cerón, Samuel E. Aggrey, Brian B. Oakley
Frontiers in Veterinary Science.2022;[Epub] CrossRef
Enterococcus alishanensis sp. nov., a novel lactic acid bacterium isolated from fresh coffee beans
Jen-hao Chung, Misa Otoguro, Fujitoshi Yanagida, Hui-chung Wu, Yu-chung Chang, Yun-Shien Lee, Yi-sheng Chen
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Comparative Genomics of the Genus Pseudomonas Reveals Host- and Environment-Specific Evolution
Zaki Saati-Santamaría, Riccardo Baroncelli, Raúl Rivas, Paula García-Fraile, Olaya Rendueles Garcia
Microbiology Spectrum.2022;[Epub] CrossRef
Croceicoccus gelatinilyticus sp. nov., isolated from a tidal flat sediment
Tao Pei, Yang Liu, Juan Du, Kunpeng Huang, Ming-Rong Deng, Honghui Zhu
Archives of Microbiology.2022;[Epub] CrossRef
Shewanella jiangmenensis sp. nov., isolated from aquaculture water
Yingli Song, Anzhang Li, Shuaishuai Xu, Mingxia Zhang, Qing Yao, Lian Ma, Honghui Zhu
Archives of Microbiology.2022;[Epub] CrossRef
Mesonia aestuariivivens sp. nov., isolated from a tidal flat
Sooyeon Park, Jung-Sook Lee, Wonyong Kim, Jung-Hoon Yoon
Archives of Microbiology.2022;[Epub] CrossRef
Chryseobacterium tagetis sp. nov., a plant growth promoting bacterium with an antimicrobial activity isolated from the roots of medicinal plant (Tagetes patula)
Geeta Chhetri, Inhyup Kim, Jiyoun Kim, Yoonseop So, Taegun Seo
The Journal of Antibiotics.2022; 75(6): 312. CrossRef
Description ofPseudogemmobacter faecipullorumsp. nov., isolated from poultry manure
Shih-Yao Lin, Asif Hameed, Chia-Fang Tsai, Yu-Shan Tang, Chiu-Chung Young
FEMS Microbiology Letters.2022;[Epub] CrossRef
Acetylenotrophic and Diazotrophic Bradyrhizobium sp. Strain I71 from TCE-Contaminated Soils
Denise M. Akob, John M. Sutton, Timothy J. Bushman, Shaun M. Baesman, Edina Klein, Yesha Shrestha, Robert Andrews, Janna L. Fierst, Max Kolton, Sara Gushgari-Doyle, Ronald S. Oremland, John L. Freeman, Jeremy D. Semrau
Applied and Environmental Microbiology.2022;[Epub] CrossRef
Definition of the Metagenomic Profile of Ocean Water Samples From the Gulf of Mexico Based on Comparison With Reference Samples From Sites Worldwide
Antonio Loza, Fernando García-Guevara, Lorenzo Segovia, Alejandra Escobar-Zepeda, Maria del Carmen Sanchez-Olmos, Enrique Merino, Alejandro Sanchez-Flores, Liliana Pardo-Lopez, Katy Juarez, Rosa-Maria Gutierrez-Rios
Frontiers in Microbiology.2022;[Epub] CrossRef
Marinobacterium arenosum sp. nov., isolated from a coastal sand
Yunjeong Lee, Veeraya Weerawongwiwat, Jong-Hwa Kim, Jung-Hoon Yoon, Jung-Sook Lee, Ampaitip Sukhoom, Wonyong Kim
Archives of Microbiology.2022;[Epub] CrossRef
Nocardioides palaemonis sp. nov. and Tessaracoccus palaemonis sp. nov., isolated from the gastrointestinal tract of lake prawn
Do-Yeon Kim, In-Chul Jeong, So-Yeon Lee, Yun-Seok Jeong, Jeong Eun Han, Euon Jung Tak, June-Young Lee, Pil Soo Kim, Dong-Wook Hyun, Jin-Woo Bae
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Genomic characterization and production of antimicrobial lipopeptides by Bacillus velezensis P45 growing on feather by-products
Carolini Esmeriz da Rosa, Cristian Mauricio Barreto Pinilla, Paolo Stincone, Jamile Queiroz Pereira, Ana Paula Muterle Varela, Fabiana Quoos Mayer, Adriano Brandelli
Journal of Applied Microbiology.2022; 132(3): 2067. CrossRef
Subtercola endophyticus sp. nov., a cold-adapted bacterium isolated from Abies koreana
Lingmin Jiang, Yuxin Peng, Jiyoon Seo, Doeun Jeon, Mi Gyeong Jo, Ju Huck Lee, Jae Cheol Jeong, Cha Young Kim, Hyeong Cheol Park, Jiyoung Lee
Scientific Reports.2022;[Epub] CrossRef
Type IV pili trigger episymbiotic association of Saccharibacteria with its bacterial host
Bingliang Xie, Jian Wang, Yong Nie, Jing Tian, Zerui Wang, Dongwei Chen, Beiyu Hu, Xiao-Lei Wu, Wenbin Du
Proceedings of the National Academy of Sciences.2022;[Epub] CrossRef
Gymnodinialimonas ceratoperidinii gen. nov., sp. nov., isolated from rare marine dinoflagellate Ceratoperidinium margalefii
Yue Jiang, Yuxin Peng, Hyeon Ho Shin, Hyun Jung Kim, Ki-Hyun Kim, Lingmin Jiang, Jiyoung Lee, Zhun Li
Archives of Microbiology.2022;[Epub] CrossRef
Pufferfish (Tetraodon cutcutia) Sampled from a Freshwater River Serves as an Intermediate Reservoir of a Sucrose Nonfermenting Variant of Vibrio cholerae PS-4
Lipika Das, Sushanta Deb, Eiji Arakawa, Shinji Yamasaki, Subrata K. Das, Courtney J. Robinson
Microbiology Spectrum.2022;[Epub] CrossRef
Deinococcus betulae sp. nov. and Deinococcus arboris sp. nov., novel bacteria isolated from bark of birch tree (Betula platyphylla)
Seokhyeon Bae, Heeyoung Kang, Haneul Kim, Kiseong Joh
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Hi-C deconvolution of a textile dye–related microbiome reveals novel taxonomic landscapes and links phenotypic potential to individual genomes
Ayixon Sánchez-Reyes, Luz Bretón-Deval, Hayley Mangelson, Ilse Salinas-Peralta, Alejandro Sanchez-Flores
International Microbiology.2022; 25(1): 99. CrossRef
Thermal Endurance by a Hot-Spring-Dwelling Phylogenetic Relative of the Mesophilic Paracoccus
Nibendu Mondal, Chayan Roy, Sumit Chatterjee, Jagannath Sarkar, Subhajit Dutta, Sabyasachi Bhattacharya, Ranadhir Chakraborty, Wriddhiman Ghosh, Jeffrey A. Gralnick
Microbiology Spectrum.2022;[Epub] CrossRef
Microbiota of the Pregnant Mouse: Characterization of the Bacterial Communities in the Oral Cavity, Lung, Intestine, and Vagina through Culture and DNA Sequencing
Jonathan M. Greenberg, Roberto Romero, Andrew D. Winters, Jose Galaz, Valeria Garcia-Flores, Marcia Arenas-Hernandez, Jonathan Panzer, Zachary Shaffer, David J. Kracht, Nardhy Gomez-Lopez, Kevin R. Theis, Jennifer M. Auchtung
Microbiology Spectrum.2022;[Epub] CrossRef
Sphingomonas radiodurans sp. nov., a novel radiation-resistant bacterium isolated from the north slope of Mount Everest
Yang Liu, Tuo Chen, Xiaowen Cui, Yeteng Xu, Shixin Hu, Yidan Zhao, Wei Zhang, Guangxiu Liu, Gaosen Zhang
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Enterovibrio paralichthyis sp. nov., isolated from the gut of an olive flounder Paralichthys olivaceus
Young-Ok Kim, In-Suk Park, Dong-Gyun Kim, Sooyeon Park, Sung Hoon Han, Jung-Hoon Yoon
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Deep Learning Encoding for Rapid Sequence Identification on Microbiome Data
Jacob Borgman, Karen Stark, Jeremy Carson, Loren Hauser
Frontiers in Bioinformatics.2022;[Epub] CrossRef
Arthrobacter wenxiniae sp. nov., a novel plant growth-promoting rhizobacteria species harbouring a carotenoids biosynthetic gene cluster
Yu-chen Sun, Pengbo Sun, Jing Xue, Yunpeng Du, Hui Yan, Li-wei Wang, Xin-xin Yi, Jian-guang Sun, Xiuhai Zhang, Jun-lian Gao
Antonie van Leeuwenhoek.2022; 115(3): 353. CrossRef
Microvirga terricola sp. nov. and Microvirga solisilvae sp. nov, isolated from forest soil
Xianjiao Zhang, Guang-Da Feng, Xiangling Zhen, Yulian Zhang, Xiaoqin Deng, Honghui Zhu, Qing Yao
Archives of Microbiology.2022;[Epub] CrossRef
Pararoseburia lenta gen. nov., sp. nov. isolated from human faeces
Rashidin Abdugheni, Yu-Jing Wang, Dan-Hua Li, Meng-Xuan Du, Chang Liu, Nan Zhou, Shuang-Jiang Liu
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Six novel Micromonospora species associated with the phyllosphere and roots of leguminous plants: Micromonospora alfalfae sp. nov., Micromonospora cabrerizensis sp. nov., Micromonospora foliorum sp. nov., Micromonospora hortensis sp. nov., Micromonospora
Raúl Riesco, Maite Ortúzar, Brenda Román-Ponce, Fernando Sánchez-Juanes, José Mariano Igual, Martha E. Trujillo
International Journal of Systematic and Evolutionary Microbiology .2022;[Epub] CrossRef
Rothia santali sp. nov., endophytic bacteria isolated from sandalwood (Santalum album L.) seedling
Ngangyola Tuikhar, Kiran Kirdat, Gayatri Nair, S. Padma, Vipool Thorat, P. Swetha, Shivaji Sathe, R. Sundararaj, Amit Yadav
Archives of Microbiology.2022;[Epub] CrossRef
Rhodococcus spelaei sp. nov., isolated from a cave, and proposals that Rhodococcus biphenylivorans is a later synonym of Rhodococcus pyridinivorans, Rhodococcus qingshengii and Rhodococcus baikonurensis are later synonyms of Rhodococcus eryth
Soon Dong Lee, In Seop Kim
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Sweet spheres: succession and CAZyme expression of marine bacterial communities colonizing a mix of alginate and pectin particles
Carina Bunse, Hanna Koch, Sven Breider, Meinhard Simon, Matthias Wietz
Environmental Microbiology.2021; 23(6): 3130. CrossRef
Pareuzebyella sediminis gen. nov., sp. nov., a novel marine bacterium in the family Flavobacteriaceae, isolated from a tidal flat sediment
Zhaobin Huang, Xiaomei Wei, Qiliang Lai, Shiyong Chen, Jianjun Yuan
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Description of Devosia faecipullorum sp. nov., harboring antibiotic- and toxic compound-resistant genes, isolated from poultry manure
Shih-Yao Lin, Chia-Fang Tsai, Asif Hameed, Yu-Shan Tang, Chiu-Chung Young
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Description of Nocardioides piscis sp. nov., Sphingomonas piscis sp. nov. and Sphingomonas sinipercae sp. nov., isolated from the intestine of fish species Odontobutis interrupta (Korean spotted sleeper) and Siniperca scherzeri (leopard mandarin fish)
Dong-Wook Hyun, Yun-Seok Jeong, Jae-Yun Lee, Hojun Sung, So-Yeon Lee, Jee-Won Choi, Hyun Sik Kim, Pil Soo Kim, Jin-Woo Bae
Journal of Microbiology.2021; 59(6): 552. CrossRef
Pseudomonas schmalbachii sp. nov., isolated from the gut of a millipede (Trigoniulus corallinus) from a coconut tree
Matan Shelomi, Wen-Ming Chen, Hsin-Kuang Chen, Hsin-Ying Lee, Chiu-Chung Young, Shih-Yao Lin, Shwu-Jen Liaw
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Fuscibacter oryzae gen. nov., sp. nov., a phosphate-solubilizing bacterium isolated from the rhizosphere of rice plant
Geeta Chhetri, Minchung Kang, Jiyoun Kim, Inhyup Kim, Yoonseop So, Taegun Seo
Antonie van Leeuwenhoek.2021; 114(9): 1453. CrossRef
Genome insight and description of antibiotic producing Massilia antibiotica sp. nov., isolated from oil-contaminated soil
Ram Hari Dahal, Dhiraj Kumar Chaudhary, Jaisoo Kim
Scientific Reports.2021;[Epub] CrossRef
Maritimibacter harenae sp. nov. and Sneathiella litorea sp. nov.: members of Alphaproteobacteria isolated from sea sand
Shehzad Abid Khan, Hye Su Jung, Hye Yoon Park, Che Ok Jeon
Antonie van Leeuwenhoek.2021; 114(6): 799. CrossRef
Palleronia sediminis sp. nov. and Flavivirga algicola sp. nov., two marine bacteria isolated from offshore areas near Weihai
Xun-Ke Sun, Ya-Ning Zhang, Yu-Yao Jia, Yan-Lin Zhong, Guan-Jun Chen, Zong-Jun Du
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Paenarthrobacter sp. GOM3 Is a Novel Marine Species With Monoaromatic Degradation Relevance
Jaime Rosas-Díaz, Alejandra Escobar-Zepeda, Libertad Adaya, Jorge Rojas-Vargas, Diego Humberto Cuervo-Amaya, Ayixon Sánchez-Reyes, Liliana Pardo-López
Frontiers in Microbiology.2021;[Epub] CrossRef
Pseudidiomarina piscicola sp. nov., isolated from cultured European seabass, Dicenthrarchus labrax
M. Carmen Macián, Teresa Lucena, David R. Arahal, María A. Ruvira, Rosa Aznar, María J. Pujalte
Archives of Microbiology.2021; 203(4): 1293. CrossRef
Pseudoprevotella muciniphila gen. nov., sp. nov., a mucin-degrading bacterium attached to the bovine rumen epithelium
Sang Weon Na, Byung Hee Chun, Seok-Hyeon Beak, Shehzad Abid Khan, Md. Najmul Haque, Jae Sung Lee, Che Ok Jeon, Sang-Suk Lee, Myunggi Baik, Pankaj Kumar Arora
PLOS ONE.2021; 16(5): e0251791. CrossRef
Nocardioides baculatus sp. nov., a novel actinomycete isolated from the rhizosphere of Tagetes patula
Geeta Chhetri, Inhyup Kim, Minchung Kang, Jiyoun Kim, Yoonseop So, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Phylogenomic Analyses of a Clade Within the Family Flavobacteriaceae Suggest Taxonomic Reassignments of Species of the Genera Algibacter, Hyunsoonleella, Jejuia, and Flavivirga, and the Proposal of Pseudalgibacter gen. nov. and Pseudalgibacter alginicilyt
Miao Li, Ling-Zhi Hou, Xing-Hao Xu, Xiao-Xiao Wang, Ming-Can Zheng, Yan-Jiao Zhang, Ang Liu
Current Microbiology.2021; 78(8): 3277. CrossRef
Description of antibiotic-producing novel bacteria Paraburkholderia antibiotica sp. nov. and Paraburkholderia polaris sp. nov.
Ram Hari Dahal, Jungmin Kim, Dhiraj Kumar Chaudhary, Dong-Uk Kim, Jaisoo Kim
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Thiomicrorhabdus sediminis sp. nov. and Thiomicrorhabdus xiamenensis sp. nov., novel sulfur-oxidizing bacteria isolated from coastal sediments and an emended description of the genus Thiomicrorhabdus
Xuewen Liu, Baoping Chen, Qiliang Lai, Zongze Shao, Lijing Jiang
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Sanguibacter suaedae sp. nov., isolated from the root of Suaeda aralocaspica in north-west PR China
Qin Ma, Rui-Feng Lei, Yu-Qian Li, Dilireba Abudourousuli, Zulihumaer Rouzi, Muyesaier Aosiman, Fang Liu, Yang-Yang Liu, Deng-Di An, Wen-Jun Li
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Algibacillus agarilyticus gen. nov., sp. nov., isolated from the surface of the red algae Gelidium amansii
Xue Meng, Ya-Qi Chang, Huan Wang, Zong-Jun Du
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
'Candidatus Phytoplasma sacchari’, a novel taxon - associated with Sugarcane Grassy Shoot (SCGS) disease
Kiran Kirdat, Bhavesh Tiwarekar, Vipool Thorat, Shivaji Sathe, Yogesh Shouche, Amit Yadav
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Bruguierivorax albus gen. nov. sp. nov. Isolated from Mangrove Sediment and Proposal of Bruguierivoracaceae fam. nov
Mi Li, Kai Liu, Yonghong Liu, Chenghai Gao, Xiangxi Yi
Current Microbiology.2021; 78(2): 856. CrossRef
Uliginosibacterium aquaticum sp. nov., Isolated from a Freshwater Lake
Jaeho Song, Mirae Kim, Miri S. Park, Yochan Joung, Ilnam Kang, Jang-Cheon Cho
Current Microbiology.2021; 78(9): 3381. CrossRef
Nonlabens ponticola sp. nov., isolated from seawater and reclassification of Nonlabens sediminis as a later heterotypic synonym of Nonlabens tegetincola
Ye Lin Seo, Jaejoon Jung, Chi-une Song, Yong Min Kwon, Hye Su Jung, Seong-il Eyun, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Thermosipho ferrireducens sp.nov., an anaerobic thermophilic iron(III)-reducing bacterium isolated from a deep-sea hydrothermal sulfide deposits
Yao Chen, Yang He, Zongze Shao, Xiqiu Han, Danling Chen, Jian Yang, Xiang Zeng
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Peteryoungia gen. nov. with four new species combinations and description of Peteryoungia desertarenae sp. nov., and taxonomic revision of the genus Ciceribacter based on phylogenomics of Rhizobiaceae
Praveen Rahi, Mitesh Khairnar, Ashwini Hagir, Avinash Narayan, Kunal R. Jain, Datta Madamwar, Aabeejjeet Pansare, Yogesh Shouche
Archives of Microbiology.2021; 203(6): 3591. CrossRef
Brevilactibacter coleopterorum sp. nov., isolated from the intestine of the dark diving beetle Hydrophilus acuminatus, and Weissella coleopterorum sp. nov., isolated from the intestine of the diving beetle Cybister lewisianus
Dong-Wook Hyun, June-Young Lee, Hojun Sung, Pil Soo Kim, Yun-Seok Jeong, Jae-Yun Lee, Ji-Hyun Yun, Jee-Won Choi, Jeong Eun Han, So-Yeon Lee, Euon Jung Tak, Hyun Sik Kim, Jin-Woo Bae
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Crassaminicella thermophila sp. nov., a moderately thermophilic bacterium isolated from a deep-sea hydrothermal vent chimney and emended description of the genus Crassaminicella
Xue-Gong Li, Jin Lin, Shi-Jie Bai, Jie Dai, Ze-Xi Jiao, Hong-Zhi Tang, Xiao-Qing Qi, Wei-Jia Zhang, Min Liu, Jian-Sheng Xu, Long-Fei Wu
International Journal of Systematic and Evolutionary Microbiology.2021;[Epub] CrossRef
Isoptericola sediminis sp. nov., Isolated from Chilika Lagoon
Dhanesh Kumar, Jagadeeshwari U., Krishnaiah A., Suresh G., Ch. Sasikala, Ch. Venkata Ramana
Current Microbiology.2021; 78(2): 848. CrossRef
“Candidatus Laterigemmans baculatus” gen. nov. sp. nov., the first representative of rod shaped planctomycetes with lateral budding in the family Pirellulaceae
Dhanesh Kumar, Gaurav Kumar, Uppada Jagadeeshwari, Chintalapati Sasikala, Chintalapati Venkata Ramana
Systematic and Applied Microbiology.2021; 44(2): 126188. CrossRef
Rahnella laticis sp. nov. and Rahnella contaminans sp. nov., and emended description of the genus Rahnella
Dabin Jeon, In Seop Kim, Soon Dong Lee
International Journal of Systematic and Evolutionary Microbiology.2021;[Epub] CrossRef
Proposal of Thermoactinomyces mirandus sp. nov., a filamentous, anaerobic bacterium isolated from a biogas plant
Mira Mutschlechner, Nina Lackner, Rudolf Markt, Willi Salvenmoser, Christopher A. Dunlap, Andreas O. Wagner
Antonie van Leeuwenhoek.2021; 114(1): 45. CrossRef
Enrichment and physiological characterization of a novel comammox Nitrospira indicates ammonium inhibition of complete nitrification
Dimitra Sakoula, Hanna Koch, Jeroen Frank, Mike S M Jetten, Maartje A H J van Kessel, Sebastian Lücker
The ISME Journal.2021; 15(4): 1010. CrossRef
Pontixanthobacter rizhaonensis sp. nov., a marine bacterium isolated from surface seawater of the Yellow Sea, and proposal of Pseudopontixanthobacter gen. nov., Pseudopontixanthobacter confluentis comb. nov. and Pseudopontixanthobacter sedimi
Ang Liu, Qing-Jie Xue, Shi-Gen Li, Yan-Jiao Zhang
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Burkholderia species in human infections in Mexico: Identification of B. cepacia, B. contaminans, B. multivorans, B. vietnamiensis,B. pseudomallei and a new Burkholderia species
Georgina Meza-Radilla, Violeta Larios-Serrato, Rigoberto Hernández-Castro, J. Antonio Ibarra, Paulina Estrada-de los Santos, Yunn-Hwen Gan
PLOS Neglected Tropical Diseases.2021; 15(6): e0009541. CrossRef
Chryseobacterium caseinilyticum sp. nov., a casein hydrolyzing bacterium isolated from rice plant and emended description of Chryseobacterium piscicola
Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Minchung Kang, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Genome-Based Taxonomic Rearrangement of the Order Geobacterales Including the Description of Geomonas azotofigens sp. nov. and Geomonas diazotrophica sp. nov.
Zhenxing Xu, Yoko Masuda, Xueding Wang, Natsumi Ushijima, Yutaka Shiratori, Keishi Senoo, Hideomi Itoh
Frontiers in Microbiology.2021;[Epub] CrossRef
Description of Ornithinimicrobium ciconiae sp. nov., and Ornithinimicrobium avium sp. nov., isolated from the faeces of the endangered and near-threatened birds
So-Yeon Lee, Hojun Sung, Pil Soo Kim, Hyun Sik Kim, Jae-Yun Lee, June-Young Lee, Yun-Seok Jeong, Euon Jung Tak, Jeong Eun Han, Dong-Wook Hyun, Jin-Woo Bae
Journal of Microbiology.2021; 59(11): 978. CrossRef
CAZymes in Maribacter dokdonensis 62–1 From the Patagonian Shelf: Genomics and Physiology Compared to Related Flavobacteria and a Co-occurring Alteromonas Strain
Laura A. Wolter, Maximilian Mitulla, Jovan Kalem, Rolf Daniel, Meinhard Simon, Matthias Wietz
Frontiers in Microbiology.2021;[Epub] CrossRef
Gephyromycinifex aptenodytis gen. nov., sp. nov., isolated from gut of Antarctic emperor penguin Aptenodytes forsteri
Wen-Zhuo Zhu, Ya-Ming Ge, Hui-Min Gao, Jun Dai, Xiao-Ling Zhang, Qiao Yang
Antonie van Leeuwenhoek.2021; 114(12): 2003. CrossRef
Roseibium litorale sp. nov., isolated from a tidal flat sediment and proposal for the reclassification of Labrenzia polysiphoniae as Roseibium polysiphoniae comb. nov.
Yang Liu, Tao Pei, Juan Du, Meijie Chao, Ming-Rong Deng, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Enrichment of novel Verrucomicrobia, Bacteroidetes, and Krumholzibacteria in an oxygen‐limited methane‐ and iron‐fed bioreactor inoculated with Bothnian Sea sediments
Paula Dalcin Martins, Anniek de Jong, Wytze K. Lenstra, Niels A. G. M. van Helmond, Caroline P. Slomp, Mike S. M. Jetten, Cornelia U. Welte, Olivia Rasigraf
MicrobiologyOpen.2021;[Epub] CrossRef
Description of Acinetobacter kanungonis sp. nov., based on phylogenomic analysis
Lipika Das, Sushanta Deb, Subrata K. Das
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Inhella proteolytica sp. nov. and Inhella gelatinilytica sp. nov., two novel species of the genus Inhella isolated from aquaculture water
Yang Liu, Tao Pei, Juan Du, Ming-Rong Deng, Honghui Zhu
Archives of Microbiology.2021; 203(6): 3191. CrossRef
Variimorphobacter saccharofermentans gen. nov., sp. nov., a new member of the family Lachnospiraceae, isolated from a maize-fed biogas fermenter
Regina Rettenmaier, Nils Thieme, Johanna Streubel, Luca Di Bello, Marie-Louise Kowollik, Liren Huang, Irena Maus, Andreas Klingl, Wolfgang Liebl, Vladimir V. Zverlov
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Crateriforma spongiae sp. nov., isolated from a marine sponge and emended description of the genus “Crateriforma”
Gaurav Kumar, Dhanesh Kumar, U. Jagadeeshwari, P. K. Sreya, A. Shabbir, Ch. Sasikala, Ch. V. Ramana
Antonie van Leeuwenhoek.2021; 114(4): 341. CrossRef
Characterization of Sulfurimonas hydrogeniphila sp. nov., a Novel Bacterium Predominant in Deep-Sea Hydrothermal Vents and Comparative Genomic Analyses of the Genus Sulfurimonas
Shasha Wang, Lijing Jiang, Qitao Hu, Liang Cui, Bitong Zhu, Xiaoteng Fu, Qiliang Lai, Zongze Shao, Suping Yang
Frontiers in Microbiology.2021;[Epub] CrossRef
Elizabethkingia argenteiflava sp. nov., isolated from the pod of soybean, Glycine max
Jun-Hee Hwang, Jihyeon Kim, Jae-heon Kim, SangJoon Mo
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Clostridium fessum sp. nov., isolated from human faeces
Boram Seo, Kyungchan Jeon, Inwoo Baek, Yung Mi Lee, Kiwoon Baek, GwangPyo Ko
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
A sulfate-reducing bacterial genus, Desulfosediminicola gen. nov., comprising two novel species cultivated from tidal-flat sediments
Jaeho Song, Juchan Hwang, Ilnam Kang, Jang-Cheon Cho
Scientific Reports.2021;[Epub] CrossRef
Hyphomicrobium album sp. nov., isolated from mountain soil and emended description of genus Hyphomicrobium
Qing Xu, Yuxiao Zhang, Xing Wang, Gejiao Wang
Archives of Microbiology.2021; 203(10): 5931. CrossRef
Bowmanella yangjiangensis sp. nov. and Amphritea pacifica sp. nov., isolated from mariculture fishponds in China
Zhipeng Cai, Huibin Lu, Youfeng Qian, Letian Chen, Meiying Xu
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Dyella telluris sp. nov. and Dyella acidiphila sp. nov., isolated from forest soil of Dinghushan Biosphere Reserve, China
Tao Huang, Jia-cheng Fu, Shuo-han Dong, Qiu-mei Zhang, Ting-ting Wu, Li-hong Qiu
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Noviherbaspirillum pedocola sp. nov., isolated from oil-contaminated experimental soil
Dhiraj Kumar Chaudhary, Ram Hari Dahal, Yongseok Hong
Archives of Microbiology.2021; 203(6): 3071. CrossRef
Reclassification of Facklamia ignava, Facklamia sourekii and Facklamia tabacinasalis as Falseniella ignava gen. nov., comb. nov., Hutsoniella sourekii gen. nov., comb. nov., and Ruoffia tabacinasalis gen. nov., comb. nov., and description of Ruoffia halot
Rashmi Fotedar, Krithivasan Sankaranarayanan, Matthew E. Caldwell, Aisha Zeyara, Amina Al Malki, Ridhima Kaul, Hamad Al Shamari, Mohammad Ali, Masoud Al Marri, Paul A. Lawson
Antonie van Leeuwenhoek.2021; 114(8): 1181. CrossRef
Reconstructing Draft Genomes Using Genome Resolved Metagenomics Reveal Arsenic Metabolizing Genes and Secondary Metabolites in Fresh Water Lake in Eastern India
Samrat Ghosh, Aditya Narayan Sarangi, Mayuri Mukherjee, Deeksha Singh, Madduluri Madhavi, Sucheta Tripathy
Bioinformatics and Biology Insights.2021;[Epub] CrossRef
Xyloglucan processing machinery in Xanthomonas pathogens and its role in the transcriptional activation of virulence factors
Plinio S. Vieira, Isabela M. Bonfim, Evandro A. Araujo, Ricardo R. Melo, Augusto R. Lima, Melissa R. Fessel, Douglas A. A. Paixão, Gabriela F. Persinoti, Silvana A. Rocco, Tatiani B. Lima, Renan A. S. Pirolla, Mariana A. B. Morais, Jessica B. L. Correa, L
Nature Communications.2021;[Epub] CrossRef
Mesobacillus aurantius sp. nov., isolated from an orange-colored pond near a solar saltern
Anusha Rai, N. Smita, A. Shabbir, U. Jagadeeshwari, T. Keertana, Ch. Sasikala, Ch. V. Ramana
Archives of Microbiology.2021; 203(4): 1499. CrossRef
Paenibacillus foliorum sp. nov., Paenibacillus phytohabitans sp. nov., Paenibacillus plantarum sp. nov., Paenibacillus planticolens sp. nov., Paenibacillus phytorum sp. nov. and Paenibacillus germinis sp. nov., isolated from the Arabidopsis t
Shan Shan Qi, Margo Cnockaert, Aurélien Carlier, Peter A. Vandamme
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Marinobacter orientalis sp. nov., a thiosulfate-oxidizing bacterium isolated from a marine solar saltern
Feng-Bai Lian, Xu-Yang Chen, Shan Jiang, Guang-Yu Li, Zong-Jun Du
Antonie van Leeuwenhoek.2021; 114(6): 765. CrossRef
Cold-Active Shewanella glacialimarina TZS-4T nov. Features a Temperature-Dependent Fatty Acid Profile and Putative Sialic Acid Metabolism
Muhammad Suleman Qasim, Mirka Lampi, Minna-Maria K. Heinonen, Berta Garrido-Zabala, Dennis H. Bamford, Reijo Käkelä, Elina Roine, Leif Peter Sarin
Frontiers in Microbiology.2021;[Epub] CrossRef
Descriptions of Roseiconus nitratireducens gen. nov. sp. nov. and Roseiconus lacunae sp. nov.
Dhanesh Kumar, Gaurav Kumar, Jagadeeshwari Uppada, Shabbir Ahmed, Chintalapati Sasikala, Chintalapati Venkata Ramana
Archives of Microbiology.2021; 203(2): 741. CrossRef
Comparative Genome Analysis of Bacillus amyloliquefaciens Focusing on Phylogenomics, Functional Traits, and Prevalence of Antimicrobial and Virulence Genes
Hualin Liu, Vimalkumar Prajapati, Shobha Prajapati, Harsh Bais, Jianguo Lu
Frontiers in Genetics.2021;[Epub] CrossRef
Taibaiella lutea sp. nov., Isolated from Ubiquitous Weedy Grass
Geeta Chhetri, Inhyup Kim, Jiyoun Kim, Minchung Kang, Taegun Seo
Current Microbiology.2021; 78(7): 2799. CrossRef
Marinobacter shengliensis subsp. alexandrii Subsp. Nov., Isolated from Cultivable Phycosphere Microbiota of Highly Toxic Dinoflagellate Alexandrium catenella LZT09 and Description of Marinobacter shengliensis Subsp. shengliensis Subsp. Nov
Xi Yang, Rong Xiang, Nurhezreen Md Iqbal, Yu-Han Duan, Xiao-Ai Zhang, Lei Wang, Lin-Zeng Yu, Jia-Zhou Li, Ming-Fei Sun, Qiao Yang, Chun-Tian Zheng, Shen-Quan Liao
Current Microbiology.2021; 78(4): 1648. CrossRef
Assessment of Erythrobacter Species Diversity through Pan-Genome Analysis with Newly Isolated Erythrobacter sp. 3-20A1M
Sang-Hyeok Cho, Yujin Jeong, Eunju Lee, So-Ra Ko, Chi-Yong Ahn, Hee-Mock Oh, Byung-Kwan Cho, Suhyung Cho
Journal of Microbiology and Biotechnology.2021; 31(4): 601. CrossRef
Phylotaxogenomics for the Reappraisal of the Genus Roseomonas With the Creation of Six New Genera
Anusha Rai, Uppada Jagadeeshwari, Gupta Deepshikha, Nandardhane Smita, Chintalapati Sasikala, Chintalapati Venkata Ramana
Frontiers in Microbiology.2021;[Epub] CrossRef
Zafaria cholistanensis gen. nov. sp. nov., a moderately thermotolerant and halotolerant actinobacterium isolated from Cholistan desert soil of Pakistan
Arshia Amin, Iftikhar Ahmed, Nauman Khalid, Peter Schumann, Hans-Jürgen Busse, Inam Ullah Khan, Ahmad Ali, Shuai Li, Wen-Jun Li
Archives of Microbiology.2021; 203(4): 1717. CrossRef
Sphingomonas sabuli sp. nov., a carotenoid-producing bacterium isolated from beach sand
Minchung Kang, Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Gut microbiome drives individual memory variation in bumblebees
Li Li, Cwyn Solvi, Feng Zhang, Zhaoyang Qi, Lars Chittka, Wei Zhao
Nature Communications.2021;[Epub] CrossRef
Qipengyuania soli sp. nov., Isolated from Mangrove Soil
Yang Liu, Tao Pei, Ming-Rong Deng, Honghui Zhu
Current Microbiology.2021; 78(7): 2806. CrossRef
Description of Microbacterium luteum sp. nov., Microbacterium cremeum sp. nov., and Microbacterium atlanticum sp. nov., three novel C50 carotenoid producing bacteria
Fuquan Xie, Siwen Niu, Xihuang Lin, Shengxiang Pei, Li Jiang, Yun Tian, Gaiyun Zhang
Journal of Microbiology.2021; 59(10): 886. CrossRef
Arthrobacter cheniae and Arthrobacter frigidicola sp. nov., isolated from a glacier
Lei-Lei Yang, Hong-Can Liu, Qing Liu, Yu-Hua Xin
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Stappia albiluteola sp. nov., isolated from marine sediment
Shan Jiang, You-Yang Sun, Feng-Bai Lian, Xiao-Kui Zhang, Zong-Jun Du
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Flagellatimonas centrodinii gen. nov., sp. nov., a novel member of the family Nevskiaceae isolated from toxin-producing dinoflagellate Centrodinium punctatum
Yue Jiang, Lingmin Jiang, Yuxin Peng, Ki-Hyun Kim, Hyeon Ho Shin, Young-Min Kim, Jiyoung Lee, Zhun Li
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Adlercreutzia hattorii sp. nov., an equol non-producing bacterium isolated from human faeces
Mitsuo Sakamoto, Nao Ikeyama, Masahiro Yuki, Takumi Murakami, Hiroshi Mori, Takao Iino, Moriya Ohkuma
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Anaerosporobacter faecicola sp. nov. isolated from faeces of Korean cow
Seung-Hyeon Choi, Jam-Eon Park, Ji Young Choi, Ji-Sun Kim, Se Won Kang, Jiyoung Lee, Mi-Kyung Lee, Jung-Sook Lee, Ju Huck Lee, Hyunjung Jung, Tai-Young Hur, Hyeun Bum Kim, Ju-Hoon Lee, Jae-Kyung Kim, Seung-Hwan Park
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Marixanthomonas spongiae sp. nov., isolated from marine sponge
Lingping Zhuang, Haiyue Pang, Li Xu, Dan Chen
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Alkalihalobacterium elongatum gen. nov. sp. nov.: An Antibiotic-Producing Bacterium Isolated From Lonar Lake and Reclassification of the Genus Alkalihalobacillus Into Seven Novel Genera
Amaraja Joshi, Sonia Thite, Prachi Karodi, Neetha Joseph, Tushar Lodha
Frontiers in Microbiology.2021;[Epub] CrossRef
Aliidiomarina indica sp. nov., isolated from deep seawater
Lei Song, Hongcan Liu, Ying Huang, Xin Dai, Yuguang Zhou
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
First description outside Europe of the emergent pathogen Vibrio europaeus in shellfish aquaculture
Rodrigo Rojas, Andrés Blanco-Hortas, Hannah Kehlet-Delgado, Alberto Lema, Claudio D. Miranda, Jaime Romero, Paulino Martínez, Juan L. Barja, Javier Dubert
Journal of Invertebrate Pathology.2021; 180: 107542. CrossRef
Chryseoglobus indicus sp. nov., isolated from deep sea water
Shengxiang Pei, Fuquan Xie, Wenjing Wang, Shuang Zhang, Gaiyun Zhang
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Sphingosinicella flava sp. nov., indole acetic acid producing bacteria isolated from maize field soil
Geeta Chhetri, Minchung Kang, Jiyoun Kim, Inhyup Kim, Yoonseop So, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Duganella aceris sp. nov., isolated from tree sap and proposal to transfer of Rugamonas aquatica and Rugamonas rivuli to the genus Duganella as Duganella aquatica comb. nov., with the emended description of the genus Rugamonas
Dabin Jeon, In Seop Kim, Hanna Choe, Ji-Sun Kim, Soon Dong Lee
Archives of Microbiology.2021; 203(6): 2843. CrossRef
Hymenobacter puniceus sp. nov., radiation resistant bacteria isolated from soil in South Korea
Yuna Park, Soohyun Maeng, Tuvshinzaya Damdintogtokh, Minji Bang, Hyejin Oh, Sathiyaraj Srinivasan, Myung Kyum Kim
Antonie van Leeuwenhoek.2021; 114(10): 1647. CrossRef
Tessaracoccus coleopterorum sp. nov., isolated from the intestine of the dark diving beetle, Hydrophilus acuminatus
Dong-Wook Hyun, Hojun Sung, Pil Soo Kim, Jae-Yun Lee, Yun-Seok Jeong, Ji-Hyun Yun, Jee-Won Choi, Jeong Eun Han, So-Yeon Lee, Euon Jung Tak, June-Young Lee, Hyun Sik Kim, Jin-Woo Bae
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Limnohabitans radicicola sp. nov., a slow-growing bacterium isolated from rhizosphere of rice plant and emended description of the genus Limnohabitans
Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Minchung Kang, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Distribution and Diversity of Nisin Producing LAB in Fermented Food
Basista Rabina Sharma, Dharana Jayant, Kumari Rajshee, Yashika Singh, Prakash M. Halami
Current Microbiology.2021; 78(9): 3430. CrossRef
Chryseobacterium cheonjiense sp. nov., isolated from forest soil
Dhiraj Kumar Chaudhary, Ram Hari Dahal, Dong-Uk Kim, Jaisoo Kim
Archives of Microbiology.2021; 203(2): 725. CrossRef
Undibacterium baiyunense sp. nov., Undibacterium curvum sp. nov., Undibacterium fentianense sp. nov., Undibacterium flavidum sp. nov., Undibacterium griseum sp. nov., Undibacterium hunanense sp. nov., Undibacterium luofuense sp. nov., Undibac
Huibin Lu, Fei Liu, Tongchu Deng, Meiying Xu
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Flavobacterium franklandianum sp. nov. and Flavobacterium gawalongense sp. nov., isolated from glaciers on the Tibetan Plateau
Qing Liu, Hong-Can Liu, Lei-Lei Yang, Yu-Hua Xin
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Sediminihaliea albiluteola gen. nov., sp. nov., a new member of the family Halieaceae, isolated from marine sediment
Shan Jiang, Feng-Bai Lian, You-Yang Sun, Xiao-Kui Zhang, Zong-Jun Du
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Fusibacter ferrireducens sp. nov., an anaerobic, Fe(Ⅲ)- and sulphur-reducing bacterium isolated from mangrove sediment
Donghua Qiu, Xiang Zeng, Lingyu Zeng, Guangyu Li, Zongze Shao
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Geothermobacter hydrogeniphilus sp. nov., a mesophilic, iron(III)-reducing bacterium from seafloor/subseafloor environments in the Pacific Ocean, and emended description of the genus Geothermobacter
Ileana Pérez-Rodríguez, Jessica K. Choi, Karla Abuyen, Madeline Tyler, Cynthia Ronkowski, Eric Romero, Anthony Trujillo, Jason Tremblay, Isabella Viney, Pratixaben Savalia, Jan P. Amend
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Oryzicola mucosus gen. nov., sp. nov., a novel slime producing bacterium belonging to the family Phyllobacteriaceae isolated from the rhizosphere of rice plants
Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Minchung Kang, Yoonseop So, Taegun Seo
Antonie van Leeuwenhoek.2021; 114(11): 1925. CrossRef
Ostreibacterium oceani gen. nov., sp. nov., isolated from oyster, and description of Ostreibacteriaceae fam. nov.
Chao-Nan Wang, Feng-Qing Wang, Yuan Liu, Ming-Yi Wang, Zong-Jun Du
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Salegentibacter maritimus sp. nov., isolated from marine coastal sediment
Feng-Bai Lian, Shan Jiang, Ke-Lei Zhu, Dan-Dan Shang, Jing Zhang, Zong-Jun Du
Systematic and Applied Microbiology.2021; 44(3): 126209. CrossRef
Solimonas marina sp. nov., isolated from deep seawater of the Pacific Ocean
Xiupian Liu, Qiliang Lai, Fengqin Sun, Yaping Du, Yingbao Gai, Guangyu Li, Zongze Shao
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Phylo-taxogenomics of the genus Tautonia with descriptions of Tautonia marina sp. nov., Tautonia rosea sp. nov., and emended description of the genus
Kumar Gaurav, Dhanesh Kumar, U. Jagadeeshwari, A. Shabbir, Ch. Sasikala, Ch.V. Ramana
Systematic and Applied Microbiology.2021; 44(4): 126229. CrossRef
Reclassification of Algibacter wandonensis as a Later Heterotypic Synonym of Algibacter lectus Based on Whole-Genome Sequence Analysis
Ang Liu, Hui Wang, Yuan-Yuan Yang, Qing-Jie Xue, Xiu-Zhen Li
Current Microbiology.2021; 78(3): 1034. CrossRef
Vibrio ziniensis sp. nov., isolated from mangrove sediments
Jie Wu, Wu Qu, Qiliang Lai, Shengxiang Pei, Tianyou Zhang, Yan Zhuang, Zhuhua Chan, Runying Zeng
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Parasphingopyxis marina sp. nov. isolated from coastal seawater
Soo-Yeon Choi, Ji-Sung Oh, Dong-Hyun Roh
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Kushneria phosphatilytica sp. nov., a phosphate-solubilizing bacterium isolated from a solar saltern
Guang-Xun Du, Ling-Yun Qu, Xu-Guang Hong, Cheng-Hua Li, De-Wen Ding, Ping Gao, Qin-Zeng Xu
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Phylogenomic Analyses of the Genus Pseudomonas Lead to the Rearrangement of Several Species and the Definition of New Genera
Zaki Saati-Santamaría, Ezequiel Peral-Aranega, Encarna Velázquez, Raúl Rivas, Paula García-Fraile
Biology.2021; 10(8): 782. CrossRef
Marinobacter alexandrii sp. nov., a novel yellow-pigmented and algae growth-promoting bacterium isolated from marine phycosphere microbiota
Qiao Yang, Qi Feng, Bao-ping Zhang, Jia-jun Gao, Zhi Sheng, Qi-ping Xue, Xiao-ling Zhang
Antonie van Leeuwenhoek.2021; 114(6): 709. CrossRef
Multi-Omics Characterization of Host-Derived Bacillus spp. Probiotics for Improved Growth Performance in Poultry
Dwi Susanti, Alyssa Volland, Nilesh Tawari, Nielson Baxter, Dharanesh Gangaiah, Germán Plata, Akshitha Nagireddy, Troy Hawkins, Shrinivasrao P. Mane, Arvind Kumar
Frontiers in Microbiology.2021;[Epub] CrossRef
Salibaculum halophilum gen. nov., sp. nov. and Salibaculum griseiflavum sp. nov., in the family Rhodobacteraceae
Ke-Lei Zhu, Xiao-Qun Wang, Tian-Shu Zhang, Dan-Dan Shang, Zong-Jun Du
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Aquabacterium terrae sp. nov., isolated from soil
Ram Hari Dahal, Ji Yeon Han, Hyosun Lee, Dhiraj Kumar Chaudhary, Dong-Uk Kim
Archives of Microbiology.2021; 203(6): 3183. CrossRef
Safety Assessment of Lactiplantibacillus (formerly Lactobacillus) plantarum Q180
Yoo Jin Kwon, Byung Hee Chun, Hye Su Jung, Jaeryang Chu, Hyunchae Joung, Sung Yurb Park, Byoung Kook Kim, Che Ok Jeon
Journal of Microbiology and Biotechnology.2021; 31(10): 1420. CrossRef
Collimonas silvisoli sp. nov. and Collimonas humicola sp. nov., two novel species isolated from forest soil
Jiali Li, Mingkai Pan, Xianjiao Zhang, Yang Zhou, Guang-Da Feng, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Flavobacterium tagetis sp. nov., a novel urea-hydrolysing bacterium isolated from the roots of Tagetes patula
Geeta Chhetri, Inhyup Kim, Minchung Kang, Jiyoun Kim, Yoonseop So, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Croceicoccus bisphenolivorans sp. nov., a bisphenol A-degrading bacterium isolated from seawater
Jiangwei Li, Anyi Hu, Min Lv, Chang-Ping Yu
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Vineibacter terrae gen. nov., sp. nov., an ammonium-assimilating and nitrate-reducing bacterium isolated from vineyard soil
Shih-Yao Lin, Asif Hameed, Chia-Fang Tsai, Chiu-Chung Young
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Geomesophilobacter sediminis gen. nov., sp. nov., Geomonas propionica sp. nov. and Geomonas anaerohicana sp. nov., three novel members in the family Geobacterecace isolated from river sediment and paddy soil
Zhengcheng Zhang, Zhenxing Xu, Yoko Masuda, Xueding Wang, Natsumi Ushijima, Yutaka Shiratori, Keishi Senoo, Hideomi Itoh
Systematic and Applied Microbiology.2021; 44(5): 126233. CrossRef
Rouxiella aceris sp. nov., isolated from tree sap and the emended description of the genus Rouxiella
Soon Dong Lee, Hong Lim Yang, In Seop Kim
Antonie van Leeuwenhoek.2021; 114(7): 1013. CrossRef
Pseudomarimonas arenosa gen. nov., sp. nov. isolated from marine sand
Veeraya Weerawongwiwat, Jong-Hwa Kim, Jung-Hoon Yoon, Jung-Sook Lee, Ampaitip Sukhoom, Wonyong Kim
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Chitinophaga fulva sp. nov., isolated from forest soil
Ram Hari Dahal, Dhiraj Kumar Chaudhary, Dong-Uk Kim, Jaisoo Kim
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Horizontal Gene Transfer of Genes Encoding Copper-Containing Membrane-Bound Monooxygenase (CuMMO) and Soluble Di-iron Monooxygenase (SDIMO) in Ethane- and Propane-Oxidizing Rhodococcus Bacteria
Bin Zou, Ying Huang, Pan-Pan Zhang, Xiao-Ming Ding, Huub J. M. Op den Camp, Zhe-Xue Quan, Alfons J. M. Stams
Applied and Environmental Microbiology.2021;[Epub] CrossRef
Arachidicoccus soli sp. nov., a bacterium isolated from soil
Shin Ae Lee, Tae-Wan Kim, Mee-Kyung Sang, Jaekyeong Song, Soon-Wo Kwon, Hang-Yeon Weon
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Quantitative Real-Time PCR Assay for the Detection of Pectobacterium parmentieri, a Causal Agent of Potato Soft Rot
Anna A. Lukianova, Peter V. Evseev, Alexander A. Stakheev, Irina B. Kotova, Sergey K. Zavriev, Alexander N. Ignatov, Konstantin A. Miroshnikov
Plants.2021; 10(9): 1880. CrossRef
Phylogenomic Framework for Taxonomic Delineation of Paracoccus spp. and Exploration of Core-Pan Genome
Akshita Puri, Abhay Bajaj, Sukanya Lal, Yogendra Singh, Rup Lal
Indian Journal of Microbiology.2021; 61(2): 180. CrossRef
Echinicola arenosa sp. nov., isolated from marine sand
Jihye Baek, Veeraya Weerawongwiwat, Jong-Hwa Kim, Jung-Hoon Yoon, Jung-Sook Lee, Ampaitip Sukhoom, Wonyong Kim
Archives of Microbiology.2021; 203(9): 5675. CrossRef
Cold-shock gene cspC in the genome of Massilia polaris sp. nov. revealed cold-adaptation
Ram Hari Dahal, Dhiraj Kumar Chaudhary, Dong-Uk Kim, Jaisoo Kim
Antonie van Leeuwenhoek.2021; 114(8): 1275. CrossRef
Complete genome sequence of Streptomyces sp. HSG2 from rhizosphere soil of mangrove in Qingmei Gang, Sanya
Shengxiang Pei, Siwen Niu, Fuquan Xie, Shuang Zhang, Wenjing Wang, Gaiyun Zhang
Archives of Microbiology.2021; 203(6): 3519. CrossRef
Martelella alba sp. nov., isolated from mangrove rhizosphere soil within the Beibu Gulf
Mi Li, Chenghai Gao, Yuyao Feng, Kai Liu, Pei Cao, Yonghong Liu, Xiangxi Yi
Archives of Microbiology.2021; 203(4): 1779. CrossRef
Photobacterium arenosum sp. nov., isolated from marine sediment sand
Veeraya Weerawongwiwat, Seokmin Yoon, Jong-Hwa Kim, Jung-Hoon Yoon, Jung Sook Lee, Ampaitip Sukhoom, Wonyong Kim
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Oricola thermophila sp. nov., a marine bacterium isolated from tidal flat sediment and emended description of the genus Oricola Hameed et al. 2015
Sung-Hyun Yang, Mi-Jeong Park, Kae Kyoung Kwon
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Zeimonas arvi gen. nov., sp. nov., of the family Burkholderiaceae, harboring biphenyl- and phenolic acid-metabolizing genes, isolated from a long-term ecological research field
Shih-Yao Lin, Asif Hameed, Chia-Fang Tsai, Chiu-Chung Young
Antonie van Leeuwenhoek.2021; 114(12): 2101. CrossRef
Chitinilyticum piscinae sp. nov., isolated from aquaculture water
Tao Pei, Juan Du, Yang Liu, Ming-Rong Deng, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Usitatibacter rugosus gen. nov., sp. nov. and Usitatibacter palustris sp. nov., novel members of Usitatibacteraceae fam. nov. within the order Nitrosomonadales isolated from soil
Selma Vieira, Katharina J. Huber, Meina Neumann-Schaal, Alicia Geppert, Manja Luckner, Gerhard Wanner, Jörg Overmann
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Caenimonas soli sp. nov., isolated from soil
Ram Hari Dahal, Hyosun Lee, Dhiraj Kumar Chaudhary, Dae-Young Kim, Jigwan Son, Jaisoo Kim, Jong-Ok Ka, Dong-Uk Kim
Archives of Microbiology.2021; 203(3): 1123. CrossRef
Coprobacter secundus subsp. similis subsp. nov. and Solibaculum mannosilyticum gen. nov., sp. nov., isolated from human feces
Mitsuo Sakamoto, Nao Ikeyama, Atsushi Toyoda, Takumi Murakami, Hiroshi Mori, Sho Morohoshi, Tadao Kunihiro, Takao Iino, Moriya Ohkuma
Microbiology and Immunology.2021; 65(6): 245. CrossRef
Mesobacillus harenae sp. nov., isolated from the sandy soil of a cold desert
Gaosen Zhang, Ruiqi Yang, Tuo Chen, Binglin Zhang, Hui Yang, Xiukun Wu, Haining Gao, Wei Zhang, Guangxiu Liu
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Pedobacter riviphilus sp. nov., isolated from stream sediment
Hong Sik Im, Yochan Joung, Sang-Seob Lee
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Paraliobacillus salinarum sp. nov., isolated from saline soil in Yingkou, China
Ya-Lin Yin, Fang-Ling Li, Xian-Yuan Du, Ya-Xi Zhang, Lei Wang
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Leucobacter coleopterorum sp. nov., Leucobacter insecticola sp. nov., and Leucobacter viscericola sp. nov., isolated from the intestine of the diving beetles, Cybister brevis and Cybister lewisianus, and emended description of the genus Leucobacter
Dong-Wook Hyun, Hojun Sung, Pil Soo Kim, Ji-Hyun Yun, Jin-Woo Bae
Journal of Microbiology.2021; 59(4): 360. CrossRef
Brevibacterium limosum sp. nov., Brevibacterium pigmenatum sp. nov., and Brevibacterium atlanticum sp. nov., three novel dye decolorizing actinobacteria isolated from ocean sediments
Shengxiang Pei, Siwen Niu, Fuquan Xie, Wenjing Wang, Shuang Zhang, Gaiyun Zhang
Journal of Microbiology.2021; 59(10): 898. CrossRef
Saccharobesus litoralis gen. nov., sp. nov., a novel alginate-degrading bacterium isolated from the surface of intertidal algal turf
Rosyada Amran Amrina, Go Furusawa, Nyok-Sean Lau
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Sphingopyxis microcysteis sp. nov., a novel bioactive exopolysaccharides-bearing Sphingomonadaceae isolated from the Microcystis phycosphere
Xiao-ling Zhang, Gui-xian Li, Ya-ming Ge, Nurhezreen Md Iqbal, Xi Yang, Zhen-dong Cui, Qiao Yang
Antonie van Leeuwenhoek.2021; 114(6): 845. CrossRef
Aquisphaera insulae sp. nov., a new member in the family Isosphaeraceae, isolated from the floating island of Loktak lake and emended description of the genus Aquisphaera
Gaurav Kumar, Khongsai L. Lhingjakim, Jagadeeshwari Uppada, Shabbir Ahamad, Dhanesh Kumar, Gulam Mohammad Kashif, Chintalapati Sasikala, Chintalapati Venkata Ramana
Antonie van Leeuwenhoek.2021; 114(9): 1465. CrossRef
Description of Lujinxingia vulgaris sp. nov., isolated from coastal sediment via prey-traps
Shuo Wang, Da-Shuai Mu, Guang-Yu Li, Zong-Jun Du
Antonie van Leeuwenhoek.2021; 114(11): 1805. CrossRef
Novosphingobium olei sp. nov., with the ability to degrade diesel oil, isolated from oil-contaminated soil and proposal to reclassify Novosphingobium stygium as a later heterotypic synonym of Novosphingobium aromaticivorans
Dhiraj Kumar Chaudhary, Ram Hari Dahal, Dong-Uk Kim, Jaisoo Kim
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Pontibacter aquaedesilientis sp. nov., isolated from Jeongbang Waterfall, Jeju Island
Geeta Chhetri, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Aeromicrobium terrae sp. nov., isolated from a maize field
Shih-Yao Lin, Chia-Fang Tsai, Asif Hameed, Chiu-Chung Young
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
UBCG2: Up-to-date bacterial core genes and pipeline for phylogenomic analysis
Jihyeon Kim, Seong-In Na, Dongwook Kim, Jongsik Chun
Journal of Microbiology.2021; 59(6): 609. CrossRef
Engineering Vibrio sp. SP1 for the production of carotenoids directly from brown macroalgae
Sungwoo Park, Sung Won Cho, Yungyu Lee, Mincheol Choi, Jina Yang, Hojun Lee, Sang Woo Seo
Computational and Structural Biotechnology Journal.2021; 19: 1531. CrossRef
Aquabacterium soli sp. nov., a novel bacterium isolated from soil under the long-term application of bifenthrin
Lina Sun, Wei Chen, Kaihua Huang, Weiguang Lyu, Xinhua Gao
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Permianibacter fluminis sp. nov., isolated from a freshwater stream
Miri S. Park, Jaeho Song, Jaeho Chang, Yochan Joung, Ilnam Kang, Jang-Cheon Cho
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Description of Cohnella zeiphila sp. nov., a bacterium isolated from maize callus cultures
Eric T. Johnson, Patrick F. Dowd, Christopher D. Skory, Christopher A. Dunlap
Antonie van Leeuwenhoek.2021; 114(1): 37. CrossRef
Mesorhizobium microcysteis sp. nov., isolated from a culture of Microcystis aeruginosa
Jaejoon Jung, Ye Lin Seo, Kyeong Ryeol Kim, Hye Yoon Park, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Sphingobacterium micropteri sp. nov. and Sphingobacterium litopenaei sp. nov., isolated from aquaculture water
Mingxia Zhang, Anzhang Li, Shuaishuai Xu, Meng Chen, Qing Yao, Botao Xiao, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Maritimibacter alexandrii sp. nov., a New Member of Rhodobacteraceae Isolated from Marine Phycosphere
Xing Wang, Yun Ye, Fei-Fei Xu, Yu-Han Duan, Peng-Fei Xie, Qiao Yang, Xiao-Ling Zhang
Current Microbiology.2021; 78(11): 3996. CrossRef
Mucilaginibacter glaciei sp. nov. and Mucilaginibacter pankratovii sp. nov., isolated from a glacier on the Tibetan Plateau
Lei-Lei Yang, Yu Pang, Hong-Can Liu, Yu-Hua Xin, Qing Liu
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Pedobacter endophyticus sp. nov., an endophytic bacterium isolated from Carex pumila
Yuxin Peng, Lingmin Jiang, Jiyoon Seo, Zhun Li, Hanna Choe, Jae Cheol Jeong, Suk Weon Kim, Young-Min Kim, Cha Young Kim, Jiyoung Lee
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Zongyanglinia huanghaiensis gen. nov., sp. nov., a novel denitrifying bacterium isolated from the yellow sea, and transfer of Pelagicola marinus to Zongyanglinia gen. nov. as Zongyanglinia marinus comb. nov
Lili Xu, Ang Liu, Yan-Jiao Zhang
Antonie van Leeuwenhoek.2021; 114(2): 137. CrossRef
Pyomelanin-Producing Brevundimonas vitisensis sp. nov., Isolated From Grape (Vitis vinifera L.)
Lingmin Jiang, Doeun Jeon, Jueun Kim, Chul Won Lee, Yuxin Peng, Jiyoon Seo, Ju Huck Lee, Jin Hyub Paik, Cha Young Kim, Jiyoung Lee
Frontiers in Microbiology.2021;[Epub] CrossRef
Belnapia mucosa sp. nov. and Belnapia arida sp. nov., isolated from desert biocrust
Esther Molina-Menor, Àngela Vidal-Verdú, Leila Satari, Alba Calonge-García, Javier Pascual, Juli Peretó, Manuel Porcar
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Nocardioides donggukensis sp. nov. and Hyunsoonleella aquatilis sp. nov., isolated from Jeongbang Waterfall on Jeju Island
Inhyup Kim, Geeta Chhetri, Jiyoun Kim, Minchung Kang, Yoonseop So, Byungjo Lee, Wonhee Jang, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Yangia mangrovi sp. nov., a novel member of the Roseobacter clade isolated from mangrove soil and emended description of Yangia pacifica Dai et al. 2006
Ashish Verma, Shiva S. Sundharam, Yash Pal, Bhawana Bisht, Pooja Yadav, Srinivasan Krishnamurthi
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Draft genome of a novel methanotrophic Methylobacter sp. from the volcanic soils of Pantelleria Island
Carmen Hogendoorn, Nunzia Picone, Femke van Hout, Sophie Vijverberg, Lianna Poghosyan, Theo A. van Alen, Jeroen Frank, Arjan Pol, Antonia L. Gagliano, Mike S. M. Jetten, Walter D’Alessandro, Paola Quatrini, Huub J. M. Op den Camp
Antonie van Leeuwenhoek.2021; 114(3): 313. CrossRef
Strain-Specific Identification and In Vivo Immunomodulatory Activity of Heat-Killed Latilactobacillus sakei K040706
Kyung-Sook Chung, Jae Woong Choi, Ji-Sun Shin, Seo-Yeon Kim, Hee-Soo Han, Su-Yeon Kim, Kwang-Young Lee, Joo-Yeon Kang, Chang-Won Cho, Hee-Do Hong, Young Kyoung Rhee, Kyung-Tae Lee
Foods.2021; 10(12): 3034. CrossRef
Zophobihabitans entericus gen. nov., sp. nov., a new member of the family Orbaceae isolated from the gut of a superworm Zophobas morio
Chih-Horng Kuo, Pin-Yun Huang, Shih-Yi Sheu, Der-Shyan Sheu, Li-Cheng Jheng, Wen-Ming Chen
International Journal of Systematic and Evolutionary Microbiology.2021;[Epub] CrossRef
Description of Vagococcus coleopterorum sp. nov., isolated from the intestine of the diving beetle, Cybister lewisianus, and Vagococcus hydrophili sp. nov., isolated from the intestine of the dark diving beetle, Hydrophilus acuminatus, and emended descrip
Dong-Wook Hyun, Euon Jung Tak, Pil Soo Kim, Jin-Woo Bae
Journal of Microbiology.2021; 59(2): 132. CrossRef
Devosia aurantiaca sp. nov., Isolated from Mountain Soil and Proposal of Albitalea gen. nov. to Replace the Illegitimate Prokaryotic Genus Name Geomonas Khan et al. 2020
Shehzad Abid Khan, Hyung Min Kim, Byung Hee Chun, Che Ok Jeon
Current Microbiology.2021; 78(7): 2548. CrossRef
An atlas of bacterial secondary metabolite biosynthesis gene clusters
Bin Wei, Ao‐Qi Du, Zhen‐Yi Zhou, Cong Lai, Wen‐Chao Yu, Jin‐Biao Yu, Yan‐Lei Yu, Jian‐Wei Chen, Hua‐Wei Zhang, Xue‐Wei Xu, Hong Wang
Environmental Microbiology.2021; 23(11): 6981. CrossRef
Nesterenkonia sedimenti sp. nov., isolated from marine sediment
Fuquan Xie, Shengxiang Pei, Yubian Zhang, Yun Tian, Gaiyun Zhang
Archives of Microbiology.2021; 203(10): 6287. CrossRef
Phylogenomics reveals the evolution of root nodulating alpha- and beta-Proteobacteria (rhizobia)
Saleh Rahimlou, Mohammad Bahram, Leho Tedersoo
Microbiological Research.2021; 250: 126788. CrossRef
Mesonia hitae sp. nov., isolated from the seawater of the South Atlantic Ocean
Ying Zhou, Xiujun Gao, Jingjing Xu, Guizhen Li, Rui Ma, Peisheng Yan, Chunming Dong, Zongze Shao
International Journal of Systematic and Evolutionary Microbiology.2021;[Epub] CrossRef
Microcella flavibacter sp. nov., isolated from marine sediment, and reclassification of Chryseoglobus frigidaquae, Chryseoglobus indicus, and Yonghaparkia alkaliphila as Microcella frigidaquae comb. nov., Microcella indica nom. nov., and Microcella alkali
Fuquan Xie, Shengxiang Pei, Xiaoyun Huang, Lina Wang, Jinyan Kou, Gaiyun Zhang
Antonie van Leeuwenhoek.2021; 114(12): 2133. CrossRef
Hongsoonwoonella zoysiae gen. nov., sp. nov., a new member of the family Stappiaceae isolated from a tidal mudflat
Soon Dong Lee, Sung-Min Kim, Hong Lim Yang, Yeong-Sik Byeon, In Seop Kim
Archives of Microbiology.2021; 203(4): 1335. CrossRef
Poseidonibacter parvus sp. nov., isolated from a squid
Min Ji Kim, Min-gyung Baek, Su-Kyoung Shin, Hana Yi
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Methylomonas albis sp. nov. and Methylomonas fluvii sp. nov.: Two cold-adapted methanotrophs from the river Elbe and emended description of the species Methylovulum psychrotolerans
Ingeborg Bussmann, Fabian Horn, Michael Hoppert, Karl-Walter Klings, Anke Saborowski, Julia Warnstedt, Susanne Liebner
Systematic and Applied Microbiology.2021; 44(6): 126248. CrossRef
Chitinibacter bivalviorum sp. nov., isolated from the gut of the freshwater mussel Anodonta arcaeformis
Jee-Won Choi, Jae-Yun Lee, Dong-Wook Hyun, June-Young Lee, Pil Soo Kim, Jeong Eun Han, Yun-Seok Jeong, So-Yeon Lee, Hojun Sung, Euon Jung Tak, Hyun Sik Kim, Jin-Woo Bae
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Aerobic Denitrification and Heterotrophic Sulfur Oxidation in the Genus Halomonas Revealed by Six Novel Species Characterizations and Genome-Based Analysis
Liping Wang, Zongze Shao
Frontiers in Microbiology.2021;[Epub] CrossRef
Horizontal Gene Transfer and Genomic Erosion Shape Functional Differences of the Two-Partner Secretion Toxin Exla in the Genus Pseudomonas
Viviana Job, Laura Gomez-Valero, Adèle Renier, Christophe Rusniok, Stéphanie Bouillot, Viviane Chenal-Francisque, Erwan Gueguen, Annie Adrait, Mylène Robert-Genthon, Katy Jeannot, Peter Panchev, Sylvie Elsen, Marie-Odile Fauvarque, Yohann Couté, Carmen Bu
SSRN Electronic Journal .2021;[Epub] CrossRef
Schlegelella koreensis sp. nov., isolated from evaporator core of automobile air conditioning system
Dhiraj Kumar Chaudhary, Hyosun Lee, Ram Hari Dahal, Dong-Uk Kim
Archives of Microbiology.2021; 203(5): 2373. CrossRef
Chryseobacterium potabilaquae sp. nov., Chryseobacterium aquaeductus sp. nov. and Chryseobacterium fistulae sp. nov., from drinking water systems
Teresa Lucena, María A. Ruvira, M. Carmen Macián, David R. Arahal, Rosa Aznar, María J. Pujalte
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Flavobacterium undicola sp. nov., isolated from a freshwater lake
Wen-Ming Chen, Yi-Ru Xie, Soon-Wo Kwon, Shih-Yi Sheu
Archives of Microbiology.2021; 203(3): 989. CrossRef
Flavobacterium difficile sp. nov., isolated from a freshwater waterfall
Wen-Ming Chen, Ya-Xiu You, Chiu-Chung Young, Shih-Yao Lin, Shih-Yi Sheu
Archives of Microbiology.2021; 203(7): 4449. CrossRef
Salipiger mangrovisoli sp. nov., isolated from mangrove soil and the proposal for the reclassification of Paraphaeobacter pallidus as Salipiger pallidus comb. nov.
Juan Du, Yang Liu, Tao Pei, Ming-Rong Deng, Honghui Zhu
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Classification of uncultivated anammox bacteria and Candidatus Uabimicrobium into new classes and provisional nomenclature as Candidatus Brocadiia classis nov. and Candidatus Uabimicrobiia classis nov. of the phylum Planctomycetes and novel family Candida
Tushar Lodha, Simran Narvekar, Prachi Karodi
Systematic and Applied Microbiology.2021; 44(6): 126272. CrossRef
Sulfurimonas indica sp. nov., a hydrogen- and sulfur-oxidizing chemolithoautotroph isolated from a hydrothermal sulfide chimney in the Northwest Indian Ocean
Qitao Hu, Shasha Wang, Qiliang Lai, Zongze Shao, Lijing Jiang
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Pontibacter cellulosilyticus sp. nov., a carboxymethyl cellulose-hydrolysing bacterium isolated from coastal water
Minchung Kang, Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Chitinophaga rhizophila sp. nov., isolated from rhizosphere soil of banana
Xian-Jiao Zhang, Guang-Da Feng, Fan Yang, Honghui Zhu, Qing Yao
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Jinshanibacter allomyrinae sp. nov., isolated from larvae of Allomyrina dichotoma, proposal of Insectihabitans xujianqingii gen. nov., comb. nov. and emended descriptions of the genera Jinshanibacter, Limnobaculum and Pragia
Soon Dong Lee, Yeong-Sik Byeon, Sung-Min Kim, Hong Lim Yang, In Seop Kim
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Revealing taxon-specific heavy metal-resistance mechanisms in denitrifying phosphorus removal sludge using genome-centric metaproteomics
Yuan Lin, Liye Wang, Ke Xu, Kan Li, Hongqiang Ren
Microbiome.2021;[Epub] CrossRef
Development of qPCR Detection Assay for Potato Pathogen Pectobacterium atrosepticum Based on a Unique Target Sequence
Anna A. Lukianova, Peter V. Evseev, Alexander A. Stakheev, Irina B. Kotova, Sergey K. Zavriev, Alexander N. Ignatov, Konstantin A. Miroshnikov
Plants.2021; 10(2): 355. CrossRef
Marivivens aquimaris sp. nov., isolated from seawater
Jeong Ah Kim, Binna Lee, Ji Young Kang, Jae Jun Song, Jong Hyun Choi
Archives of Microbiology.2021; 203(6): 3229. CrossRef
Lysobacter arenosi sp. nov. and Lysobacter solisilvae sp. nov. isolated from soil
Kyeong Ryeol Kim, Kyung Hyun Kim, Shehzad Abid Khan, Hyung Min Kim, Dong Min Han, Che Ok Jeon
Journal of Microbiology.2021; 59(8): 709. CrossRef
Sediminibacterium soli sp. nov., isolated from soil
Shijuan Wu, Limin Zhong, Shuijiao Liao, Tengfei Li, Zijie Zhou, Gejiao Wang
Archives of Microbiology.2021; 203(3): 967. CrossRef
Rhodobacter amnigenus sp. nov. and Rhodobacter ruber sp. nov., isolated from freshwater habitats
Wen-Ming Chen, Ting-Hsuan Chang, Che-Chia Yang, Der-Shyan Sheu, Li-Cheng Jheng, Shih-Yi Sheu
International Journal of Systematic and Evolutionary Microbiology.2021;[Epub] CrossRef
Alcanivorax profundimaris sp. nov., a Novel Marine Hydrocarbonoclastic Bacterium Isolated from Seawater and Deep-Sea Sediment
Chunming Dong, Qiliang Lai, Xiupian Liu, Li Gu, Yu Zhang, Zhangxian Xie, Dazhi Wang, Zongze Shao
Current Microbiology.2021; 78(3): 1053. CrossRef
Ornithobacterium rhinotracheale: MALDI-TOF MS and Whole Genome Sequencing Confirm That Serotypes K, L and M Deviate from Well-Known Reference Strains and Numerous Field Isolates
Merima Alispahic, Lukas Endler, Michael Hess, Claudia Hess
Microorganisms.2021; 9(5): 1006. CrossRef
Geomonas silvestris sp. nov., Geomonas paludis sp. nov. and Geomonas limicola sp. nov., isolated from terrestrial environments, and emended description of the genus Geomonas
Hideomi Itoh, Zhenxing Xu, Yoko Masuda, Natsumi Ushijima, Chie Hayakawa, Yutaka Shiratori, Keishi Senoo
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Marinobacter mangrovi sp. nov., isolated from mangrove sediment
En Yi, Zongze Shao, Guizhen Li, Xiaobo Liang, Meixian Zhou
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Paraneptunicella aestuarii gen. nov., sp. nov., a member of the family Alteromonadaceae isolated from seawater in East China Sea
Yanzhu Zhang, Shufen He, Liufei Shi, Yang Liu, Deqiang Mao, Biying Liu, Xiaoping He, Bahareh Nowruzi, Dawoon Jung, Weiyan Zhang, Lijian Ding, Shan He, Liwei Liu
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Sulfurimonas sediminis sp. nov., a novel hydrogen- and sulfur-oxidizing chemolithoautotroph isolated from a hydrothermal vent at the Longqi system, southwestern Indian ocean
Shasha Wang, Zongze Shao, Qiliang Lai, Xuewen Liu, Shaobin Xie, Lijing Jiang, Suping Yang
Antonie van Leeuwenhoek.2021; 114(6): 813. CrossRef
Dyadobacter sandarakinus sp. nov., isolated from Arctic tundra soil, and emended descriptions of Dyadobacter alkalitolerans, Dyadobacter koreensis and Dyadobacter psychrophilus
Yongping Zhang, Xiaoya Peng, Kun Qin, Jia Liu, Qiang Xu, Jingjing Niu, Yanyan Zheng, Fang Peng
International Journal of Systematic and Evolutionary Microbiology .2021;[Epub] CrossRef
Current Status and Future Strategies to Increase Secondary Metabolite Production from Cyanobacteria
Yujin Jeong, Sang-Hyeok Cho, Hookeun Lee, Hyung-Kyoon Choi, Dong-Myung Kim, Choul-Gyun Lee, Suhyung Cho, Byung-Kwan Cho
Microorganisms.2020; 8(12): 1849. CrossRef
Description of Three Novel Members in the Family Geobacteraceae, Oryzomonas japonicum gen. nov., sp. nov., Oryzomonas sagensis sp. nov., and Oryzomonas ruber sp. nov.
Zhenxing Xu, Yoko Masuda, Chie Hayakawa, Natsumi Ushijima, Keisuke Kawano, Yutaka Shiratori, Keishi Senoo, Hideomi Itoh
Microorganisms.2020; 8(5): 634. CrossRef
Hypericibacter terrae gen. nov., sp. nov. and Hypericibacter adhaerens sp. nov., two new members of the family Rhodospirillaceae isolated from the rhizosphere of Hypericum perforatum
Zahra Noviana, Selma Vieira, Javier Pascual, Serge Alain Tanemossu Fobofou, Manfred Rohde, Cathrin Spröer, Boyke Bunk, Jorg Overmann
International Journal of Systematic and Evolutionary Microbiology .2020; 70(3): 1850. CrossRef
Mucilaginibacter celer sp. nov. and Aquirhabdus parva gen. nov., sp. nov., isolated from freshwater
MinJi Kim, Su-Kyoung Shin, Hana Yi
International Journal of Systematic and Evolutionary Microbiology .2020; 70(10): 5479. CrossRef
Methylotenera oryzisoli sp. nov., a lanthanide-dependent methylotrophic bacteria isolated from rice field soil
Haoxin Lv, Nurettin Sahin, Akio Tani
International Journal of Systematic and Evolutionary Microbiology .2020; 70(4): 2713. CrossRef
Lewinella aurantiaca sp. nov., a carotenoid pigment-producing bacterium isolated from surface seawater
Inhyup Kim, Geeta Chhetri, Jiyoun Kim, Minchung Kang, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2020; 70(12): 6180. CrossRef
Pseudomonas kitaguniensis sp. nov., a pathogen causing bacterial rot of Welsh onion in Japan
Hiroyuki Sawada, Takashi Fujikawa, Yoshie Nishiwaki, Harukuni Horita
International Journal of Systematic and Evolutionary Microbiology.2020; 70(5): 3018. CrossRef
Sandaracinomonas limnophila gen. nov., sp. nov., a new member of the family Cytophagaceae isolated from a freshwater mesocosm
Wen-Ming Chen, Cheng-Ye Cai, Shih-Yi Sheu
International Journal of Systematic and Evolutionary Microbiology .2020; 70(4): 2178. CrossRef
Use of Newly Designed Primers for Quantification of Complete Ammonia-Oxidizing (Comammox) Bacterial Clades and Strict Nitrite Oxidizers in the Genus Nitrospira
Ran Jiang, Jian-Gong Wang, Ting Zhu, Bin Zou, Dan-Qi Wang, Sung-Keun Rhee, Dong An, Zhi-Yuan Ji, Zhe-Xue Quan, Alfons J. M. Stams
Applied and Environmental Microbiology.2020;[Epub] CrossRef
Importance of Defluviitalea raffinosedens for Hydrolytic Biomass Degradation in Co-Culture with Hungateiclostridium thermocellum
Regina Rettenmaier, Martina Schneider, Bernhard Munk, Michael Lebuhn, Sebastian Jünemann, Alexander Sczyrba, Irena Maus, Vladimir Zverlov, Wolfgang Liebl
Microorganisms.2020; 8(6): 915. CrossRef
Flavobacterium restrictum sp. nov., Flavobacterium rhamnosiphilum sp. nov., and Flavobacterium zepuense sp. nov. isolated from glaciers
Guo-Qing Zhang, Lei-Lei Yang, Qing Liu, Hong-Can Liu, Yu-Guang Zhou, Yu-Hua Xin
International Journal of Systematic and Evolutionary Microbiology .2020; 70(8): 4583. CrossRef
Arenimonas terrae sp. nov., isolated from orchard soil
Dong Min Han, Byung Hee Chun, Hyung Min Kim, Shehzad Abid Khan, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology .2020; 70(1): 537. CrossRef
Morphologically Different Pectobacterium brasiliense Bacteriophages PP99 and PP101: Deacetylation of O-Polysaccharide by the Tail Spike Protein of Phage PP99 Accompanies the Infection
Anna A. Lukianova, Mikhail M. Shneider, Peter V. Evseev, Anna M. Shpirt, Eugenia N. Bugaeva, Anastasia P. Kabanova, Ekaterina A. Obraztsova, Kirill K. Miroshnikov, Sofiya N. Senchenkova, Alexander S. Shashkov, Stepan V. Toschakov, Yuriy A. Knirel, Alexand
Frontiers in Microbiology.2020;[Epub] CrossRef
Shedding light on biogas: Phototrophic biofilms in anaerobic digesters hold potential for improved biogas production
Christian Abendroth, Adriel Latorre-Pérez, Manuel Porcar, Claudia Simeonov, Olaf Luschnig, Cristina Vilanova, Javier Pascual
Systematic and Applied Microbiology.2020; 43(1): 126024. CrossRef
Saliniradius amylolyticus gen. nov., sp. nov., isolated from solar saltern sediment
Heeyoung Kang, Inseong Cha, Haneul Kim, Kiseong Joh
International Journal of Systematic and Evolutionary Microbiology.2020; 70(1): 267. CrossRef
Pseudomonas lalkuanensis sp. nov., isolated from a bacterial consortia of contaminated soil enriched for the remediation of e-waste
Vipool Thorat, Kiran Kirdat, Bhavesh Tiwarekar, Elaine DaCosta, Prasenjit Debbarma, Yogesh Shouche, Shivaji Sathe, Reeta Goel, Tushar Lodha, Amit Yadav
International Journal of Systematic and Evolutionary Microbiology .2020; 70(12): 6468. CrossRef
Denitrobaculum tricleocarpae gen. nov., sp. nov., a marine bacterium from coralline algae Tricleocarpa sp
Guanghua Wang, Dahao Tang, Guangyu Li, Shuailiang Xu, Ge Dang, Hongfei Su, Zhiheng Liao, Biao Chen, Wen Huang, Jiayuan Liang, Kefu Yu
International Journal of Systematic and Evolutionary Microbiology .2020; 70(5): 3335. CrossRef
Roseovarius gahaiensis sp. nov., isolated from Gahai Saline Lake, PR China
Xia Sun, Fang Wang, Yang Liu, Ying Lu
International Journal of Systematic and Evolutionary Microbiology .2020; 70(10): 5330. CrossRef
Bacillus yapensis sp. nov., a novel piezotolerant bacterium isolated from deep-sea sediment of the Yap Trench, Pacific Ocean
Xiashutong Xu, Libo Yu, Guangxin Xu, Qilin Wang, Shiping Wei, Xixiang Tang
Antonie van Leeuwenhoek.2020; 113(3): 389. CrossRef
Description of Luteithermobacter gelatinilyticus gen. nov., sp. nov., and Paremcibacter congregatus gen. nov., comb. nov. via reclassification of the genus Emcibacter
Mi-Jeong Park, Teddy Namirimu, Sung-Hyun Yang, Kae Kyoung Kwon
International Journal of Systematic and Evolutionary Microbiology .2020; 70(8): 4691. CrossRef
Genetic Organization of the aprX-lipA2 Operon Affects the Proteolytic Potential of Pseudomonas Species in Milk
Christopher Maier, Christopher Huptas, Mario von Neubeck, Siegfried Scherer, Mareike Wenning, Genia Lücking
Frontiers in Microbiology.2020;[Epub] CrossRef
Nonomuraea nitratireducens sp. nov., a new actinobacterium isolated from Suaeda australis Moq. rhizosphere
Yixin Ou, Yong Sheng, Xiaojing Hu, Dongjin Leng, Jiafu Huang, Zhiyu Hu, Linquan Bai, Zixin Deng, Qianjin Kang, Yingying Wu
International Journal of Systematic and Evolutionary Microbiology .2020; 70(9): 5026. CrossRef
Muricauda oceani sp. nov., isolated from the East Pacific Ocean
Bingxia Dong, Sidong Zhu, Ting Chen, Na Ren, Xiunuan Chen, Yong Chen, Zehao Xue, Xudong Shen, Yizhe Huang, Jifang Yang, Jigang Chen
International Journal of Systematic and Evolutionary Microbiology.2020; 70(6): 3839. CrossRef
Sphingobium fluviale sp. nov., isolated from a river
Shih-Yi Sheu, Ya-Ping Guo, Soon-Wo Kwon, Wen-Ming Chen
International Journal of Systematic and Evolutionary Microbiology.2020; 70(2): 827. CrossRef
Characterization of Staphylococcus intermedius Group Isolates Associated with Animals from Antarctica and Emended Description of Staphylococcus delphini
Veronika Vrbovská, Ivo Sedláček, Michal Zeman, Pavel Švec, Vojtěch Kovařovic, Ondrej Šedo, Monika Laichmanová, Jiří Doškař, Roman Pantůček
Microorganisms.2020; 8(2): 204. CrossRef
Variovorax beijingensis sp. nov., a novel plant-associated bacterial species with plant growth-promoting potential isolated from different geographic regions of Beijing, China
Jun-lian Gao, Yu-chen Sun, Jing Xue, Pengbo Sun, Hui Yan, Mohammad Sayyar Khan, Li-wei Wang, Xiuhai Zhang, Jian-guang Sun
Systematic and Applied Microbiology.2020; 43(6): 126135. CrossRef
Aliikangiella coralliicola sp. nov., a bacterium isolated from coral Porites lutea, and proposal of Pleioneaceae fam. nov. to accommodate Pleionea and Aliikangiella
Guanghua Wang, Ge Dang, Shuailiang Xu, Jianfeng Liu, Hongfei Su, Jiayuan Liang, Wen Huang, Yinghui Wang, Kefu Yu
International Journal of Systematic and Evolutionary Microbiology .2020; 70(11): 5880. CrossRef
Jeotgalibaca ciconiae sp. nov., isolated from the faeces of an Oriental stork
So-Yeon Lee, Woorim Kang, Pil Soo Kim, Hyun Sik Kim, Hojun Sung, Na-Ri Shin, Ji-Hyun Yun, Jae-Yun Lee, June-Young Lee, Mi-Ja Jung, Yun-Seok Jeong, Euon Jung Tak, Jeong Eun Han, Dong-Wook Hyun, Myung-Suk Kang, Ki-Eun Lee, Byoung-Hee Lee, Jin-Woo Bae
International Journal of Systematic and Evolutionary Microbiology .2020; 70(5): 3247. CrossRef
Aquabacterium lacunae sp. nov., isolated from a freshwater pond
Wen-Ming Chen, Tzu-Ying Chen, Soon-Wo Kwon, Shih-Yi Sheu
International Journal of Systematic and Evolutionary Microbiology.2020; 70(4): 2888. CrossRef
Zoogloea dura sp. nov., a N2-fixing bacterium isolated from forest soil and emendation of the genus Zoogloea and the species Zoogloea oryzae and Zoogloea ramigera
Ram Hari Dahal, Dhiraj Kumar Chaudhary, Dong-Uk Kim, Jaisoo Kim
International Journal of Systematic and Evolutionary Microbiology .2020; 70(10): 5312. CrossRef
Roseimaritima sediminicola sp. nov., a new member of Planctomycetaceae isolated from Chilika lagoon
Dhanesh Kumar, Kumar Gaurav, Jagadeeshwari U, Deepshikha G, Sasikala Ch., Ramana Ch.V.
International Journal of Systematic and Evolutionary Microbiology .2020; 70(4): 2616. CrossRef
Lactobacillus jinshani sp. nov., isolated from solid-state vinegar culture of Zhenjiang aromatic vinegar
Yongjian Yu, Xin Li, Junhong Zhang, Li-Juan Chai, Zhen-Ming Lu, Zheng-Hong Xu
Antonie van Leeuwenhoek.2020; 113(1): 43. CrossRef
Aquirufa rosea sp. nov., isolated from a freshwater lake
Shih-Yi Sheu, Tzu-Ying Chen, Wen-Ming Chen
International Journal of Systematic and Evolutionary Microbiology.2020; 70(5): 3145. CrossRef
Staphylococcus borealis sp. nov., isolated from human skin and blood
Maria Pain, Runa Wolden, Daniel Jaén-Luchoro, Francisco Salvà-Serra, Beatriz Piñeiro Iglesias, Roger Karlsson, Claus Klingenberg, Jorunn Pauline Cavanagh
International Journal of Systematic and Evolutionary Microbiology .2020; 70(12): 6067. CrossRef
Exploring the Diversity Within the Genus Francisella – An Integrated Pan-Genome and Genome-Mining Approach
Rajender Kumar, Jeanette E. Bröms, Anders Sjöstedt
Frontiers in Microbiology.2020;[Epub] CrossRef
Mesonia oceanica sp. nov., isolated from oceans during the Tara oceans expedition, with a preference for mesopelagic waters
Teresa Lucena, Isabel Sanz-Sáez, David R. Arahal, Silvia G. Acinas, Olga Sánchez, Carlos Pedrós-Alió, Rosa Aznar, María J. Pujalte
International Journal of Systematic and Evolutionary Microbiology .2020; 70(7): 4329. CrossRef
Jiella pacifica sp. nov., isolated from the West Pacific Ocean
Zehao Xue, Sidong Zhu, Xiunuan Chen, Ting Chen, Na Ren, Yong Chen, Bingxia Dong, Xudong Shen, Yizhe Huang, Jifang Yang, Jigang Chen
International Journal of Systematic and Evolutionary Microbiology.2020; 70(7): 4345. CrossRef
Sphingomonas lacunae sp. nov., isolated from a freshwater pond
Shih-Yi Sheu, Che-Chia Yang, Der-Shyan Sheu, Jyh-Ming Tsai, Wen-Ming Chen
International Journal of Systematic and Evolutionary Microbiology.2020; 70(11): 5899. CrossRef
Bradymonabacteria, a novel bacterial predator group with versatile survival strategies in saline environments
Da-Shuai Mu, Shuo Wang, Qi-Yun Liang, Zhao-Zhong Du, Renmao Tian, Yang Ouyang, Xin-Peng Wang, Aifen Zhou, Ya Gong, Guan-Jun Chen, Joy Van Nostrand, Yunfeng Yang, Jizhong Zhou, Zong-Jun Du
Microbiome.2020;[Epub] CrossRef
Gemmobacter aquarius sp. nov., Runella rosea sp. nov. and Flavobacterium fluviale sp. nov., isolated from the Namhangang River system
Min-gyung Baek, Su-Kyoung Shin, Hana Yi
International Journal of Systematic and Evolutionary Microbiology .2020; 70(11): 5640. CrossRef
Sphingobacterium endophyticum sp. nov., a novel endophyte isolated from halophyte
Yang-Yang Liu, Fang Liu, Yu-Qian Li, Rui-Feng Lei, Qin Ma, Manik Prabhu Narsing Rao, Dilireba Abudourousuli, Zulihumaer Rouzi, Muyesaier Aosiman, Deng-Di An, Wen-Jun Li
Archives of Microbiology.2020; 202(10): 2771. CrossRef
Sphingomonas montanisoli sp. nov., isolated from mountain soil
Zixiao Xu, Yuxiao Zhang, Yasir Muhammad, Gejiao Wang
International Journal of Systematic and Evolutionary Microbiology .2020; 70(6): 3606. CrossRef
Out of the Abyss: Genome and Metagenome Mining Reveals Unexpected Environmental Distribution of Abyssomicins
Alba Iglesias, Adriel Latorre-Pérez, James E. M. Stach, Manuel Porcar, Javier Pascual
Frontiers in Microbiology.2020;[Epub] CrossRef
Pseudomonas xionganensis sp. nov., isolated from Baiyangdian Lake in Xiong'an New Area
Yingying Zhao, Yunzhen Yang, Fei He, Chao Wang, Jie Feng, Xiumin Zhang
International Journal of Systematic and Evolutionary Microbiology .2020; 70(12): 6052. CrossRef
Massilia aquatica sp. nov., Isolated from a Subtropical Stream in China
Hui-Bin Lu, Tong-Chu Deng, Mei-Ying Xu
Current Microbiology.2020; 77(10): 3185. CrossRef
Duganella rivus sp. nov., Duganella fentianensis sp. nov., Duganella qianjiadongensis sp. nov. and Massilia guangdongensis sp. nov., isolated from subtropical streams in China and reclassification of all species within genus Pseudoduganella
Hui-Bin Lu, Zhi-Peng Cai, Yong-Gang Yang, Mei-Ying Xu
Antonie van Leeuwenhoek.2020; 113(8): 1155. CrossRef
Poritiphilus flavus gen. nov., sp. nov., a member of the family Flavobacteriaceae isolated from coral Porites lutea
Guanghua Wang, Shuailiang Xu, Ge Dang, Jianfeng Liu, Hongfei Su, Biao Chen, Zhiheng Liao, Wen Huang, Jiayuan Liang, Yinghui Wang, Kefu Yu
International Journal of Systematic and Evolutionary Microbiology .2020; 70(11): 5620. CrossRef
Sphingomonas edaphi sp. nov., a novel species isolated from beach soil in the Republic of Korea
Hyungdong Kim, Geeta Chhetri, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2020; 70(1): 522. CrossRef
Thalassocella blandensis gen. nov., sp. nov., a novel member of the family Cellvibrionaceae
Teresa Lucena, David R. Arahal, Isabel Sanz-Sáez, Silvia G. Acinas, Olga Sánchez, Rosa Aznar, Carlos Pedrós-Alió, María J. Pujalte
International Journal of Systematic and Evolutionary Microbiology .2020; 70(2): 1231. CrossRef
Hymenobacter terrestris sp. nov. and Hymenobacter lapidiphilus sp. nov., isolated from regoliths in Antarctica
Ivo Sedláček, Roman Pantůček, Michal Zeman, Pavla Holochová, Ondrej Šedo, Eva Staňková, Pavel Švec, Stanislava Králová, Petra Vídeňská, Lenka Micenková, Urvashi, Suresh Korpole, Rup Lal
International Journal of Systematic and Evolutionary Microbiology.2020; 70(12): 6364. CrossRef
Reclassification of genus Izhakiella into the family Erwiniaceae based on phylogenetic and genomic analyses
Lingmin Jiang, Dexin Wang, Ji-Sun Kim, Ju Huck Lee, Dae-Hyuk Kim, Suk Weon Kim, Jiyoung Lee
International Journal of Systematic and Evolutionary Microbiology .2020; 70(5): 3541. CrossRef
Orrella amnicola sp. nov., isolated from a freshwater river, reclassification of Algicoccus marinus as Orrella marina comb. nov., and emended description of the genus Orrella
Shih-Yi Sheu, Li-Chu Chen, Che-Chia Yang, Aurelien Carlier, Wen-Ming Chen
International Journal of Systematic and Evolutionary Microbiology .2020; 70(12): 6381. CrossRef
Allorhizobium terrae sp. nov., isolated from paddy soil, and reclassification of Rhizobium oryziradicis (Zhao et al. 2017) as Allorhizobium oryziradicis comb. nov.
Shih-Yao Lin, Asif Hameed, Hsin-I Huang, Chiu-Chung Young
International Journal of Systematic and Evolutionary Microbiology.2020; 70(1): 397. CrossRef
Antrihabitans stalactiti gen. nov., sp. nov., a new member of the family Nocardiaceae isolated from a cave
Soon Dong Lee, In Seop Kim, Susanne Verbarg, Yochan Joung
International Journal of Systematic and Evolutionary Microbiology .2020; 70(10): 5503. CrossRef
Methylobacterium terricola sp. nov., a gamma radiation-resistant bacterium isolated from gamma ray-irradiated soil
Jiyoun Kim, Geeta Chhetri, Inhyup Kim, Byungjo Lee, Wonhee Jang, Myung Kyum Kim, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2020; 70(4): 2449. CrossRef
Pseudomonas leptonychotis sp. nov., isolated from Weddell seals in Antarctica
Dana Nováková, Pavel Švec, Michal Zeman, Hans-Jürgen Busse, Ivana Mašlaňová, Roman Pantůček, Stanislava Králová, Lucie Krištofová, Ivo Sedláček
International Journal of Systematic and Evolutionary Microbiology .2020; 70(1): 302. CrossRef
Tichowtungia aerotolerans gen. nov., sp. nov., a novel representative of the phylum Kiritimatiellaeota and proposal of Tichowtungiaceae fam. nov., Tichowtungiales ord. nov. and Tichowtungiia class. nov.
Da-Shuai Mu, Liu-Yan Zhou, Qi-Yun Liang, Guan-Jun Chen, Zong-Jun Du
International Journal of Systematic and Evolutionary Microbiology.2020; 70(9): 5001. CrossRef
Alcanivorax sediminis sp. nov., isolated from deep-sea sediment of the Pacific Ocean
Xianzhi Liao, Qiliang Lai, Junpeng Yang, Chunming Dong, Dengfeng Li, Zongze Shao
International Journal of Systematic and Evolutionary Microbiology .2020; 70(7): 4280. CrossRef
Oleiharenicola lentus sp. nov., isolated from irrigation water
Wen-Ming Chen, Tzu-Ying Chen, Che-Chia Yang, Shih-Yi Sheu
International Journal of Systematic and Evolutionary Microbiology .2020; 70(5): 3440. CrossRef
Aestuariirhabdus litorea gen. nov., sp. nov., isolated from a sea tidal flat and proposal of Aestuariirhabdaceae fam. nov.
Shehzad Abid Khan, Hye Su Jung, Hyung Min Kim, Jeill Oh, Sang-Suk Lee, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology .2020; 70(4): 2239. CrossRef
Larkinella punicea sp. nov., isolated from manganese mine soil
Zijie Zhou, Lin Zhu, Yixuan Dong, Xian Xia, Shijuan Wu, Gejiao Wang
Archives of Microbiology.2020; 202(9): 2517. CrossRef
Persicimonas caeni gen. nov., sp. nov., the Representative of a Novel Wide-Ranging Predatory Taxon in Bradymonadales
Shuo Wang, Dashuai Mu, Zong-Jun Du
Frontiers in Microbiology.2020;[Epub] CrossRef
Distribution and conservation of known secondary metabolite biosynthesis gene clusters in the genomes of geographically diverse Microcystis aeruginosa strains
Leanne A. Pearson, Nicholas D. Crosbie, Brett A. Neilan
Marine and Freshwater Research.2020; 71(5): 701. CrossRef
Terricaulis silvestris gen. nov., sp. nov., a novel prosthecate, budding member of the family Caulobacteraceae isolated from forest soil
Selma Vieira, Javier Pascual, Christian Boedeker, Alicia Geppert, Thomas Riedel, Manfred Rohde, Jörg Overmann
International Journal of Systematic and Evolutionary Microbiology .2020; 70(9): 4966. CrossRef
Description of Azotobacter chroococcum subsp. isscasi subsp. nov. isolated from paddy soil and establishment of Azotobacter chroococcum subsp. chroococcum subsp. nov.
Haiyang Jin, Hui Wang, Yanhui Zhang, Tianlong Hu, Zhibin Lin, Benjuan Liu, Jing Ma, Xiaojie Wang, Qi Liu, Xingwu Lin, Zubin Xie
International Journal of Systematic and Evolutionary Microbiology .2020; 70(3): 2124. CrossRef
Gracilibacillus oryzae sp. nov., isolated from rice seeds
Shan-Wen He, Xing Wang, He-Bao Guo, Ji-Gang Han, Kyu Kyu Thin, Ju-sheng Gao, Li-An Ma, Xiao-Xia Zhang
International Journal of Systematic and Evolutionary Microbiology .2020; 70(10): 5467. CrossRef
Senegalimassilia faecalis sp. nov., an anaerobic actinobacterium isolated from human faeces, and emended description of the genus Senegalimassilia
Kook-Il Han, Ji-Sun Kim, Keun Chul Lee, Mi Kyung Eom, Min Kuk Suh, Han Sol Kim, Seung-Hwan Park, Ju Huck Lee, Se Won Kang, Jam-Eon Park, Byeong Seob Oh, Seung Yeob Yu, Seung-Hyeon Choi, Dong Ho Lee, Hyuk Yoon, Byung-Yong Kim, Je Hee Lee, Jung-Sook Lee
International Journal of Systematic and Evolutionary Microbiology .2020; 70(3): 1684. CrossRef
Limnobacter alexandrii sp. nov., a thiosulfate-oxidizing, heterotrophic and EPS-bearing Burkholderiaceae isolated from cultivable phycosphere microbiota of toxic Alexandrium catenella LZT09
Yuhan Duan, Zhiwei Jiang, Zheng Wu, Zhi Sheng, Xi Yang, Jingya Sun, Xiaoling Zhang, Qiao Yang, Xinwei Yu, Jianbo Yan
Antonie van Leeuwenhoek.2020; 113(11): 1689. CrossRef
Alteromonas profundi sp. nov., isolated from the Indian Ocean
Xudong Shen, Sidong Zhu, Bingxia Dong, Yong Chen, Zehao Xue, Na Ren, Ting Chen, Xiunuan Chen, Jifang Yang, Jigang Chen
International Journal of Systematic and Evolutionary Microbiology .2020; 70(8): 4531. CrossRef
Wenzhouxiangella limi sp. nov., isolated from a salt lake
Xiao-Yu Zhang, Rui Zhang, Jia-Cheng Wang, Ting Zhang, Zong-Jun Du
International Journal of Systematic and Evolutionary Microbiology .2020; 70(8): 4610. CrossRef
Hymenobacter ginkgonis sp. nov., isolated from bark of Ginkgo biloba
Inseong Cha, Heeyoung Kang, Haneul Kim, Seokhyeon Bae, Kiseong Joh
International Journal of Systematic and Evolutionary Microbiology .2020; 70(8): 4760. CrossRef
Maribacter luteus sp. nov., a marine bacterium isolated from intertidal sand of the Yellow Sea
Ang Liu, Yan-Jiao Zhang, De-Kun Liu, Xiu-Zhen Li
International Journal of Systematic and Evolutionary Microbiology .2020; 70(5): 3497. CrossRef
Cryobacterium soli sp. nov., isolated from forest soil
Chunjie Gong, Qiliang Lai, Hanfeng Cai, Yanming Jiang, Hu Liao, Yunfei Liu, Dongsheng Xue
International Journal of Systematic and Evolutionary Microbiology .2020; 70(1): 675. CrossRef
Flavobacterium supellecticarium sp. nov., isolated from an abandoned construction timber
Shih-Yao Lin, Wen-Ming Chen, Guan-Hua Huang, Asif Hameed, Chun-Tse Chang, Chia-Fang Tsai, Chiu-Chung Young
International Journal of Systematic and Evolutionary Microbiology .2020; 70(6): 3731. CrossRef
Rubrivivax albus sp. nov., isolated from a freshwater pond
Shih-Yi Sheu, Zhi-Hao Li, Chiu-Chung Young, Wen-Ming Chen
International Journal of Systematic and Evolutionary Microbiology.2020; 70(2): 805. CrossRef
Tabrizicola oligotrophica sp. nov. and Rhodobacter tardus sp. nov., two new species of bacteria belonging to the family Rhodobacteraceae
Ceshing Sheu, Zhi-Hao Li, Shih-Yi Sheu, Che-Chia Yang, Wen-Ming Chen
International Journal of Systematic and Evolutionary Microbiology .2020; 70(12): 6266. CrossRef
Spirosoma telluris sp. nov. and Spirosoma arboris sp. nov. isolated from soil and tree bark, respectively
Heeyoung Kang, Inseong Cha, Haneul Kim, Kiseong Joh
International Journal of Systematic and Evolutionary Microbiology .2020; 70(10): 5355. CrossRef
Devosia indica sp. nov., isolated from surface seawater in the Indian Ocean
Danqiu Lin, Yizhe Huang, Yong Chen, Sidong Zhu, Jifang Yang, Jigang Chen
International Journal of Systematic and Evolutionary Microbiology .2020; 70(1): 340. CrossRef
Brevilactibacter flavus gen. nov., sp. nov., a novel bacterium of the family Propionibacteriaceae isolated from raw milk and dairy products and reclassification of Propioniciclava sinopodophylli as Brevilactibacter sinopodophylli comb. nov.
Mareike Wenning, Franziska Breitenwieser, Christopher Huptas, Etienne Doll, Benedikt Bächler, Annika Schulz, Andreas Dunkel, Thomas Hofmann, Mario von Neubeck, Hans-Jürgen Busse, Siegfried Scherer
International Journal of Systematic and Evolutionary Microbiology.2020; 70(4): 2186. CrossRef
Ideonella livida sp. nov., isolated from a freshwater lake
Wen-Ming Chen, Li-Chu Chen, Der-Shyan Sheu, Jyh-Ming Tsai, Shih-Yi Sheu
International Journal of Systematic and Evolutionary Microbiology.2020; 70(9): 4942. CrossRef
Jejubacter calystegiae gen. nov., sp. nov., moderately halophilic, a new member of the family Enterobacteriaceae, isolated from beach morning glory
Lingmin Jiang, Dexin Wang, Jung-Sook Lee, Dae-Hyuk Kim, Jae Cheol Jeong, Cha Young Kim, Suk Weon Kim, Jiyoung Lee
Journal of Microbiology.2020; 58(5): 357. CrossRef
Hymenobacter setariae sp. nov., isolated from the ubiquitous weedy grass Setaria viridis
Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Hyungdong Kim, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2020; 70(6): 3724. CrossRef
Geomonas soli gen. nov., sp. nov., a New Member of the Family Comamonadaceae, Isolated from Soil
Shehzad Abid Khan, Sang Eun Jeong, Hye Yoon Park, Sang-Suk Lee, Che Ok Jeon
Current Microbiology.2020; 77(2): 286. CrossRef
Arenibacter lacus sp. nov., Isolated from Chilika Lagoon, India
Dhanesh Kumar, Nandardhane Smita, Gaurav Kumar, Gandham Suresh, Uppada Jagadeeshwari, Chintalapati Sasikala, Chintalapati Venkata Ramana
Current Microbiology.2020; 77(12): 4152. CrossRef
Adhaeribacter arboris sp. nov., and Adhaeribacter pallidiroseus sp. nov., novel bacteria isolated from birch tree (Betula platyphylla)
Heeyoung Kang, Haneul Kim, Inseong Cha, Kiseong Joh
International Journal of Systematic and Evolutionary Microbiology .2020; 70(12): 6195. CrossRef
Sphingobium algorifonticola sp. nov., isolated from a cold spring
Wen-Ming Chen, Ya-Ping Guo, Ceshing Sheu, Shih-Yi Sheu
International Journal of Systematic and Evolutionary Microbiology.2020; 70(1): 309. CrossRef
Distribution of Phototrophic Purple Nonsulfur Bacteria in Massive Blooms in Coastal and Wastewater Ditch Environments
Akira Hiraishi, Nobuyoshi Nagao, Chinatsu Yonekawa, So Umekage, Yo Kikuchi, Toshihiko Eki, Yuu Hirose
Microorganisms.2020; 8(2): 150. CrossRef
Rhodovarius crocodyli sp. nov., isolated from a crocodile pond
Wen-Ming Chen, Yi-Ru Xie, Der-Shyan Sheu, Jyh-Ming Tsai, Shih-Yi Sheu
International Journal of Systematic and Evolutionary Microbiology.2020; 70(9): 5141. CrossRef
Description of Azoarcus nasutitermitis sp. nov. and Azoarcus rhizosphaerae sp. nov., two nitrogen-fixing species isolated from termite nest and rhizosphere of Ficus religiosa
Shih-Yao Lin, Asif Hameed, Chia-Fang Tsai, Guan-Hua Huang, Yi-Han Hsu, Chiu-Chung Young
Antonie van Leeuwenhoek.2020; 113(7): 933. CrossRef
Cohnella fermenti sp. nov., isolated from a fermentation process
Shih-Yao Lin, Wen-Ming Chen, Asif Hameed, Guan-Hua Huang, Mei-Hua Hung, Chiu-Chung Young
International Journal of Systematic and Evolutionary Microbiology .2020; 70(4): 2602. CrossRef
Gimesia chilikensis sp. nov., a haloalkali-tolerant planctomycete isolated from Chilika lagoon and emended description of the genus Gimesia
Dhanesh Kumar, Kumar Gaurav, Sreya PK, Shabbir A., Jagadeeshwari Uppada, Sasikala Ch., Ramana Ch.V.
International Journal of Systematic and Evolutionary Microbiology .2020; 70(6): 3647. CrossRef
Salinibius halmophilus gen. nov., sp. nov., isolated from a marine solar saltern
Si-Kai Ling, Hui Zhang, Nan-Nan Wang, Guan-Jun Chen, Zong-Jun Du
International Journal of Systematic and Evolutionary Microbiology .2020; 70(2): 1079. CrossRef
Metagenomic profiling of ammonia- and methane-oxidizing microorganisms in two sequential rapid sand filters
Lianna Poghosyan, Hanna Koch, Jeroen Frank, Maartje A.H.J. van Kessel, Geert Cremers, Theo van Alen, Mike S.M. Jetten, Huub J.M. Op den Camp, Sebastian Lücker
Water Research.2020; 185: 116288. CrossRef
“ Candidatus Desulfobulbus rimicarensis,” an Uncultivated Deltaproteobacterial Epibiont from the Deep-Sea Hydrothermal Vent Shrimp Rimicaris exoculata
Lijing Jiang, Xuewen Liu, Chunming Dong, Zhaobin Huang, Marie-Anne Cambon-Bonavita, Karine Alain, Li Gu, Shasha Wang, Zongze Shao, Shuang-Jiang Liu
Applied and Environmental Microbiology.2020;[Epub] CrossRef
Nocardioides convexus sp. nov. and Nocardioides anomalus sp. nov., isolated from soil and mineral water
Yuna Park, Qingzhen Liu, Soohyun Maeng, Won Jung Choi, Yoonjee Chang, Wan-Taek Im
International Journal of Systematic and Evolutionary Microbiology .2020; 70(12): 6402. CrossRef
Mesorhizobium alexandrii sp. nov., isolated from phycosphere microbiota of PSTs-producing marine dinoflagellate Alexandrium minutum amtk4
Xi Yang, Zhiwei Jiang, Jing Zhang, Xin Zhou, Xiaoling Zhang, Lei Wang, Ting Yu, Zhilin Wang, Jinlong Bei, Bo Dong, Zhangyan Dai, Qiao Yang, Zhuang Chen
Antonie van Leeuwenhoek.2020; 113(7): 907. CrossRef
Description of Massilia rubra sp. nov., Massilia aquatica sp. nov., Massilia mucilaginosa sp. nov., Massilia frigida sp. nov., and one Massilia genomospecies isolated from Antarctic streams, lakes and regoliths
Pavla Holochová, Ivana Mašlaňová, Ivo Sedláček, Pavel Švec, Stanislava Králová, Vojtěch Kovařovic, Hans-Jürgen Busse, Eva Staňková, Miloš Barták, Roman Pantůček
Systematic and Applied Microbiology.2020; 43(5): 126112. CrossRef
Paradesulfovibrio onnuriensis gen. nov., sp. nov., a chemolithoautotrophic sulfate-reducing bacterium isolated from the Onnuri vent field of the Indian Ocean and reclassification of Desulfovibrio senegalensis as Paradesulfovibrio senegalensis comb. nov.
Yun Jae Kim, Jhung-Ahn Yang, Jae Kyu Lim, Mi-Jeong Park, Sung-Hyun Yang, Hyun Sook Lee, Sung Gyun Kang, Jung-Hyun Lee, Kae Kyoung Kwon
Journal of Microbiology.2020; 58(4): 252. CrossRef
Litorilituus lipolyticus sp. nov., isolated from intertidal sand of the Yellow Sea in China, and emended description of Colwellia asteriadis
Ang Liu, Yan-Jiao Zhang, Qing-Jie Xue, Hui Wang, Yuan-Yuan Yang, Feng Du, Long-Yu Zhao, Hong-Hua Zhang, Yun-Qing Li, Xiu-Zhen Li
Antonie van Leeuwenhoek.2020; 113(4): 449. CrossRef
Wocania indica gen. nov., sp. nov., isolated from deep sea hydrothermal sulfide in the northwest Indian Ocean, and proposal to reclassify Flaviramulus ichthyoenteri as Wocania ichthyoenteri comb. nov.
Yang He, Xiang Zeng, Jinbo Xiong, Qiliang Lai, Jianyang Li, Zongze Shao
International Journal of Systematic and Evolutionary Microbiology.2020; 70(10): 5488. CrossRef
Whole genome analysis calls for a taxonomic rearrangement of the genus Colwellia
Ang Liu, Yan-Jiao Zhang, Peng Cheng, Ya-Jie Peng, Jochen Blom, Qing-Jie Xue
Antonie van Leeuwenhoek.2020; 113(7): 919. CrossRef
Leeia aquatica sp. nov., isolated from freshwater
Jaeho Song, Yochan Joung, Shan-Hui Li, Juchan Hwang, Jang-Cheon Cho
International Journal of Systematic and Evolutionary Microbiology .2020; 70(11): 5848. CrossRef
Aurantiacibacter rhizosphaerae sp. nov., isolated from a rhizosphere mudflat of a halophyte and proposal to reclassify Erythrobacter suaedae Lee et al. 2019. and Erythrobacter flavus Yoon et al. 2003 as Aurantiacibacter suaedae comb. nov. and
Soon Dong Lee, In Seop Kim
International Journal of Systematic and Evolutionary Microbiology .2020; 70(12): 6257. CrossRef
Hydrogen and Carbon Monoxide-Utilizing Kyrpidia spormannii Species From Pantelleria Island, Italy
Carmen Hogendoorn, Arjan Pol, Nunzia Picone, Geert Cremers, Theo A. van Alen, Antonina L. Gagliano, Mike S. M. Jetten, Walter D’Alessandro, Paola Quatrini, Huub J. M. Op den Camp
Frontiers in Microbiology.2020;[Epub] CrossRef
Fundicoccus ignavus gen. nov., sp. nov., a novel genus of the family Aerococcaceae isolated from bulk tank milk
Annemarie Siebert, Christopher Huptas, Mareike Wenning, Siegfried Scherer, Etienne V. Doll
International Journal of Systematic and Evolutionary Microbiology .2020; 70(8): 4774. CrossRef
Flammeovirga pectinis sp. nov., isolated from the gut of the Korean scallop, Patinopecten yessoensis
Yun-Seok Jeong, Woorim Kang, Hojun Sung, June-Young Lee, Ji-Hyun Yun, Na-Ri Shin, Hyun Sik Kim, So-Yeon Lee, Jeong Eun Han, Jae-Yun Lee, Euon Jung Tak, Pil Soo Kim, Dong-Wook Hyun, Mi-Ja Jung, Tae Woong Whon, Myung-Suk Kang, Ki-Eun Lee, Byoung-Hee Lee, Ji
International Journal of Systematic and Evolutionary Microbiology .2020; 70(1): 499. CrossRef
High counts of thermophilic spore formers in dairy powders originate from persisting strains in processing lines
Anna Dettling, Carolin Wedel, Christopher Huptas, Jörg Hinrichs, Siegfried Scherer, Mareike Wenning
International Journal of Food Microbiology.2020; 335: 108888. CrossRef
Paenibacillus lycopersici sp. nov. and Paenibacillus rhizovicinus sp. nov., isolated from the rhizosphere of tomato (Solanum lycopersicum)
Shin Ae Lee, Tae-Wan Kim, Jun Heo, Mee-Kyung Sang, Jaekyeong Song, Soon-Wo Kwon, Hang-Yeon Weon
Journal of Microbiology.2020; 58(10): 832. CrossRef
Cerasibacillus terrae sp. nov., isolated from maize field, and emended description of Cerasibacillus quisquiliarum Nakamura et al. 2004
Shih-Yao Lin, Chia-Fang Tsai, Asif Hameed, Chiu-Chung Young
International Journal of Systematic and Evolutionary Microbiology .2020; 70(11): 5725. CrossRef
Microbial community composition and functional potential in Bothnian Sea sediments is linked to Fe and S dynamics and the quality of organic matter
Olivia Rasigraf, Niels A. G. M. van Helmond, Jeroen Frank, Wytze K. Lenstra, Matthias Egger, Caroline P. Slomp, Mike S. M. Jetten
Limnology and Oceanography.2020;[Epub] CrossRef
Metagenomic Association Analysis of Gut Symbiont Limosilactobacillus reuteri Without Host-Specific Genome Isolation
Sein Park, Martin Steinegger, Ho-Seong Cho, Jongsik Chun
Frontiers in Microbiology.2020;[Epub] CrossRef
Methylobacterium symbioticum sp. nov., a new species isolated from spores of Glomus iranicum var. tenuihypharum
Jose Antonio Pascual, Margarita Ros, Jesus Martínez, Francisco Carmona, Antonio Bernabé, Rocío Torres, Teresa Lucena, Rosa Aznar, David R. Arahal, Felix Fernández
Current Microbiology.2020; 77(9): 2031. CrossRef
Sphingomonas solaris sp. nov., isolated from a solar panel in Boston, Massachusetts
Kristie Tanner, Christopher P. Mancuso, Juli Peretó, Ahmad S. Khalil, Cristina Vilanova, Javier Pascual
International Journal of Systematic and Evolutionary Microbiology .2020; 70(3): 1814. CrossRef
Adhaeribacter rhizoryzae sp. nov., a fibrillar matrix-producing bacterium isolated from the rhizosphere of rice plant
Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Byungjo Lee, Wonhee Jang, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2020; 70(10): 5382. CrossRef
Genomic Comparison of Insect Gut Symbionts from Divergent Burkholderia Subclades
Kazutaka Takeshita, Yoshitomo Kikuchi
Genes.2020; 11(7): 744. CrossRef
Duganella albus sp. nov., Duganella aquatilis sp. nov., Duganella pernnla sp. nov. and Duganella levis sp. nov., isolated from subtropical streams in China
Huibin Lu, Tongchu Deng, Feifei Liu, Yonghong Wang, Xunan Yang, Meiying Xu
International Journal of Systematic and Evolutionary Microbiology .2020; 70(6): 3801. CrossRef
Description of Maribellus sediminis sp. nov., a marine nitrogen-fixing bacterium isolated from sediment of cordgrass and mangrove
Zhaobin Huang, Yuzhong Hu, Qiliang Lai, Yu Guo
Systematic and Applied Microbiology.2020; 43(4): 126099. CrossRef
Ningiella ruwaisensis gen. nov., sp. nov., a member of the family Alteromonadaceae isolated from marine water of the Arabian Gulf
Rashmi Fotedar, Matthew E. Caldwell, Krithivasan Sankaranarayanan, Aisha Al -Zeyara, Ameena Al-Malki, Ridhima Kaul, Masoud Al Marri, Hamad S. Al -Shamari, Paul A. Lawson
International Journal of Systematic and Evolutionary Microbiology .2020; 70(7): 4130. CrossRef
Maribacter algicola sp. nov., isolated from a marine red alga, Porphyridium marinum, and transfer of Maripseudobacter aurantiacus Chen et al. 2017 to the genus Maribacter as Maribacter aurantiacus comb. nov.
Shehzad Abid Khan, Sang Eun Jeong, Ju Hye Baek, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology .2020; 70(2): 797. CrossRef
In silico functional and evolutionary analyses of rubber oxygenases (RoxA and RoxB)
Vikas Sharma, Fauzul Mobeen, Tulika Prakash
3 Biotech.2020;[Epub] CrossRef
Improved Metagenomic Taxonomic Profiling Using a Curated Core Gene-Based Bacterial Database Reveals Unrecognized Species in the Genus Streptococcus
Mauricio Chalita, Sung-min Ha, Yeong Ouk Kim, Hyun-Seok Oh, Seok-Hwan Yoon, Jongsik Chun
Pathogens.2020; 9(3): 204. CrossRef
Klebsiella indica sp. nov., isolated from the surface of a tomato
Sukriti Gujarati, Diptaraj Chaudhari, Ashwini Hagir, Mitesh Khairnar, Yogesh Shouche, Praveen Rahi
International Journal of Systematic and Evolutionary Microbiology .2020; 70(5): 3278. CrossRef
Cupriavidus agavae sp. nov., a species isolated from Agave L. rhizosphere in northeast Mexico
Ivan Arroyo-Herrera, Jessica Maldonado-Hernández, Fernando-Uriel Rojas-Rojas, Georgina Meza-Radilla, Violeta Larios-Serrato, María-Soledad Vásquez-Murrieta, William B. Whitman, Paulina Estrada-de los Santos
International Journal of Systematic and Evolutionary Microbiology .2020; 70(7): 4165. CrossRef
Filimonas effusa sp. nov., isolated from a freshwater river
Wen-Ming Chen, Tzu-Ying Chen, Zhi-Hao Li, Soon-Wo Kwon, Shih-Yi Sheu
International Journal of Systematic and Evolutionary Microbiology.2020; 70(3): 1508. CrossRef
Duganella lactea sp. nov., Duganella guangzhouensis sp. nov., Duganella flavida sp. nov. and Massilia rivuli sp. nov., isolated from a subtropical stream in PR China and proposal to reclassify Duganella ginsengisoli as Massilia ginsengisoli c
Huibin Lu, Tongchu Deng, Feifei Liu, Yonghong Wang, Xunan Yang, Meiying Xu
International Journal of Systematic and Evolutionary Microbiology .2020; 70(8): 4822. CrossRef
Genome-based reclassification of Paenibacillus jamilae Aguilera et al. 2001 as a later heterotypic synonym of Paenibacillus polymyxa (Prazmowski 1880) Ash et al. 1994
Min-Jung Kwak, Seon-Bin Choi, Sung-min Ha, Eun Hye Kim, Byung-Yong Kim, Jongsik Chun
International Journal of Systematic and Evolutionary Microbiology .2020; 70(5): 3134. CrossRef
Aequoribacter fuscus gen. nov., sp. nov., a new member of the family Halieaceae, isolated from coastal seawater
Shan-Hui Li, Jaeho Song, Ilnam Kang, Juchan Hwang, Jang-Cheon Cho
Journal of Microbiology.2020; 58(6): 463. CrossRef
Psychroflexus maritimus sp. nov., isolated from coastal sediment
Yan-Lin Zhong, Rui Zhang, Xiao-Yu Zhang, Li-Xue Yu, Meng-Fan Zhao, Zong-Jun Du
Archives of Microbiology.2020; 202(8): 2127. CrossRef
Ketobacter nezhaii sp. nov., a marine bacterium isolated from coastal sediment
Jianyang Li, Mingming Qi, Qiliang Lai, Xianhua Liu, Zongze Shao
International Journal of Systematic and Evolutionary Microbiology.2020; 70(9): 4960. CrossRef
Sphingobacterium chungjuense sp. nov., isolated from a freshwater lake
Jaeho Song, Yochan Joung, Shan-Hui Li, Juchan Hwang, Jang-Cheon Cho
International Journal of Systematic and Evolutionary Microbiology .2020; 70(12): 6126. CrossRef
Paracoccus xiamenensis sp. nov., isolated from seawater on the Xiamen
Lina Lyu, Bin Zhi, Qiliang Lai, Zongze Shao, Zhiqiang Yu
International Journal of Systematic and Evolutionary Microbiology .2020; 70(7): 4285. CrossRef
Paludisphaera soli sp. nov., a new member of the family Isosphaeraceae isolated from high altitude soil in the Western Himalaya
Rishabh Kaushik, Meesha Sharma, Kumar Gaurav, U. Jagadeeshwari, A. Shabbir, Ch. Sasikala, Ch. V. Ramana, Maharaj K. Pandit
Antonie van Leeuwenhoek.2020; 113(11): 1663. CrossRef
Lacibacter luteus sp. nov., isolated from a freshwater river
Shih-Yi Sheu, Tzu-Ying Chen, Soon-Wo Kwon, Wen-Ming Chen
International Journal of Systematic and Evolutionary Microbiology.2020; 70(2): 1404. CrossRef
Flavobacterium ichthyis sp. nov., isolated from a fish pond
Wen-Ming Chen, Che-Chia Yang, Ceshing Sheu, Soon-Wo Kwon, Shih-Yi Sheu
International Journal of Systematic and Evolutionary Microbiology .2020; 70(9): 5075. CrossRef
Mucilaginibacter agri sp. nov. and Mucilaginibacter humi sp. nov., isolated from soil
Ye Lin Seo, Shehzad Abid Khan, Hyung Min Kim, Byung Hee Chun, Dong Min Han, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology .2020; 70(8): 4616. CrossRef
Ferrimonas sediminicola sp. nov. and Ferrimonas aestuarii sp. nov., Fe(III)-reducing bacteria isolated from marine environments
Juchan Hwang, Jaeho Song, Yeonjung Lim, Yochan Joung, Jang-Cheon Cho
International Journal of Systematic and Evolutionary Microbiology .2020; 70(9): 4927. CrossRef
Patiriisocius marinistellae gen. nov., sp. nov., isolated from the starfish Patiria pectinifera, and reclassification of Ulvibacter marinus as a member of the genus Patiriisocius comb. nov.
Keisuke Kawano, Natsumi Ushijima, Minoru Kihara, Hideomi Itoh
International Journal of Systematic and Evolutionary Microbiology .2020; 70(7): 4119. CrossRef
Integration of culture-dependent and independent methods provides a more coherent picture of the pig gut microbiome
Gavin J Fenske, Sudeep Ghimire, Linto Antony, Jane Christopher-Hennings, Joy Scaria
FEMS Microbiology Ecology.2020;[Epub] CrossRef
Pseudomonas karstica sp. nov. and Pseudomonas spelaei sp. nov., isolated from calcite moonmilk deposits from caves
Pavel Švec, Marcel Kosina, Michal Zeman, Pavla Holochová, Stanislava Králová, Eva Němcová, Lenka Micenková, Urvashi, Vipin Gupta, Utkarsh Sood, Rup Lal, Suresh Korpole, Ivo Sedláček
International Journal of Systematic and Evolutionary Microbiology .2020; 70(9): 5131. CrossRef
Extremophilic nitrite-oxidizing Chloroflexi from Yellowstone hot springs
Eva Spieck, Michael Spohn, Katja Wendt, Eberhard Bock, Jessup Shively, Jeroen Frank, Daniela Indenbirken, Malik Alawi, Sebastian Lücker, Jennifer Hüpeden
The ISME Journal.2020; 14(2): 364. CrossRef
Novosphingobium ovatum sp. nov., isolated from a freshwater mesocosm
Wen-Ming Chen, Cheng-Ye Cai, Der-Shyan Sheu, Jyh-Ming Tsai, Shih-Yi Sheu
International Journal of Systematic and Evolutionary Microbiology .2020; 70(10): 5243. CrossRef
Sunxiuqinia indica sp. nov., isolated from deep sea
Jianyang Li, Mingming Qi, Qiliang Lai, Guangyi Wang, Zongze Shao
International Journal of Systematic and Evolutionary Microbiology .2020; 70(7): 4186. CrossRef
Saccharibacillus brassicae sp. nov., an endophytic bacterium isolated from kimchi cabbage (Brassica rapa subsp. pekinensis) seeds
Lingmin Jiang, Chan Ju Lim, Song-Gun Kim, Jae Cheol Jeong, Cha Young Kim, Dae-Hyuk Kim, Suk Weon Kim, Jiyoung Lee
Journal of Microbiology.2020; 58(1): 24. CrossRef
Sphingorhabdus lacus sp. nov. and Sphingorhabdus profundilacus sp. nov., isolated from freshwater environments
Miri Park, Ilsuk Jung, Jaeho Song, Jang-Cheon Cho
International Journal of Systematic and Evolutionary Microbiology .2020; 70(5): 3202. CrossRef
Novosphingobium umbonatum sp. nov., isolated from a freshwater mesocosm
Shih-Yi Sheu, Cheng-Ye Cai, Soon-Wo Kwon, Wen-Ming Chen
International Journal of Systematic and Evolutionary Microbiology.2020; 70(2): 1122. CrossRef
Pseudooceanicola pacificus sp. nov., isolated from deep-sea sediment of the Pacific Ocean
Lina Lyu, Qiliang Lai, Jianyang Li, Zongze Shao, Zhiqiang Yu
International Journal of Systematic and Evolutionary Microbiology .2020; 70(7): 4372. CrossRef
Halioglobus maricola sp. nov., isolated from coastal seawater
Shan-Hui Li, Jaeho Song, Yeonjung Lim, Yochan Joung, Ilnam Kang, Jang-Cheon Cho
International Journal of Systematic and Evolutionary Microbiology .2020; 70(3): 1868. CrossRef
Cryobacterium ruanii sp. nov. and Cryobacterium breve sp. nov., isolated from glaciers
Qing Liu, Ji-Hui Tian, Hong-Can Liu, Yu-Guang Zhou, Yu-Hua Xin
International Journal of Systematic and Evolutionary Microbiology .2020; 70(3): 1918. CrossRef
Prokaryotic sigma factors and their transcriptional counterparts in Archaea and Eukarya
Ana G. Abril, Jose Luis R. Rama, A. Sánchez-Pérez, Tomás G. Villa
Applied Microbiology and Biotechnology.2020; 104(10): 4289. CrossRef
Nitratireductor alexandrii sp. nov., from phycosphere microbiota of toxic marine dinoflagellate Alexandrium tamarense
Zhiwei Jiang, Yuhan Duan, Xi Yang, Bing Yao, Teer Zeng, Xiaoyan Wang, Qi Feng, Min Qi, Qiao Yang, Xiaoling Zhang
International Journal of Systematic and Evolutionary Microbiology .2020; 70(7): 4390. CrossRef
Croceicoccus sediminis sp. nov., isolated from coastal sediment
Zhaobin Huang, Aoqiang Zhang, Qiliang Lai, Jianjun Yuan
International Journal of Systematic and Evolutionary Microbiology .2020; 70(2): 779. CrossRef
Signs of a phyllospheric lifestyle in the genome of the stress-tolerant strain Azospirillum brasilense Az19
Julia E. García, Maria M. Labarthe, Luciana A. Pagnussat, Melina Amenta, Cecilia M. Creus, Guillermo A. Maroniche
Systematic and Applied Microbiology.2020; 43(6): 126130. CrossRef
Genomic, metabolic and phenotypic variability shapes ecological differentiation and intraspecies interactions of Alteromonas macleodii
Hanna Koch, Nora Germscheid, Heike M. Freese, Beatriz Noriega-Ortega, Dominik Lücking, Martine Berger, Galaxy Qiu, Ezequiel M. Marzinelli, Alexandra H. Campbell, Peter D. Steinberg, Jörg Overmann, Thorsten Dittmar, Meinhard Simon, Matthias Wietz
Scientific Reports.2020;[Epub] CrossRef
Reinekea thalattae sp. nov., a New Species of the Genus Reinekea Isolated from Surface Seawater in Sehwa Beach
Inhyup Kim, Geeta Chhetri, Jiyoun Kim, Minchung Kang, Taegun Seo
Current Microbiology.2020; 77(12): 4174. CrossRef
All ANIs are not created equal: implications for prokaryotic species boundaries and integration of ANIs into polyphasic taxonomy
Marike Palmer, Emma T. Steenkamp, Jochen Blom, Brian P. Hedlund, Stephanus N. Venter
International Journal of Systematic and Evolutionary Microbiology .2020; 70(4): 2937. CrossRef
Rhizobium indicum sp. nov., isolated from root nodules of pea (Pisum sativum) cultivated in the Indian trans-Himalayas
Praveen Rahi, Pranoti Giram, Diptaraj Chaudhari, George C. diCenzo, Shashi Kiran, Aastha Khullar, Mahima Chandel, Sayali Gawari, Anagha Mohan, Shraddha Chavan, Bhagyashree Mahajan
Systematic and Applied Microbiology.2020; 43(5): 126127. CrossRef
Nonlabens xiamenensis sp. nov., isolated from coastal seawater
Zhaobin Huang, Yaping Du, Qiliang Lai, Zongze Shao
Antonie van Leeuwenhoek.2019; 112(8): 1263. CrossRef
Amniculibacterium aquaticum gen. nov., sp. nov., a new member of the family Flavobacteriaceae isolated from a stream
Wen-Ming Chen, Ya-Ping Guo, Ceshing Sheu, Shih-Yi Sheu
Archives of Microbiology.2019; 201(8): 1119. CrossRef
Discovery of a functional, contracted heme-binding motif within a multiheme cytochrome
Christina Ferousi, Simon Lindhoud, Frauke Baymann, Eric R. Hester, Joachim Reimann, Boran Kartal
Journal of Biological Chemistry.2019; 294(45): 16953. CrossRef
Flavobacterium piscinae sp. nov., isolated from a fish pond
Wen-Ming Chen, Ya-Ping Guo, Soon-Wo Kwon, Shih-Yi Sheu
International Journal of Systematic and Evolutionary Microbiology .2019; 69(6): 1775. CrossRef
Description of Sphingobium psychrophilum sp. nov., a cold-adapted bacterium isolated from Arctic soil
Ram Hari Dahal, Dhiraj Kumar Chaudhary, Dong-Uk Kim, Jaisoo Kim
International Journal of Systematic and Evolutionary Microbiology .2019;[Epub] CrossRef
Uncultured Nitrospina-like species are major nitrite oxidizing bacteria in oxygen minimum zones
Xin Sun, Linnea F M Kop, Maggie C Y Lau, Jeroen Frank, Amal Jayakumar, Sebastian Lücker, Bess B Ward
The ISME Journal.2019; 13(10): 2391. CrossRef
Sphingomonas crocodyli sp. nov., isolated from a crocodile pond
Shih-Yi Sheu, Yi-Ru Xie, Soon-Wo Kwon, Ceshing Sheu, Wen-Ming Chen
International Journal of Systematic and Evolutionary Microbiology.2019; 69(7): 2153. CrossRef
N-glycan Utilization by Bifidobacterium Gut Symbionts Involves a Specialist β-Mannosidase
Rosa Lorizolla Cordeiro, Renan Augusto Siqueira Pirolla, Gabriela Felix Persinoti, Fábio Cesar Gozzo, Priscila Oliveira de Giuseppe, Mario Tyago Murakami
Journal of Molecular Biology.2019; 431(4): 732. CrossRef
Identification of Molecular Markers That Are Specific to the Class Thermoleophilia
Danyu Hu, Yang Zang, Yingjin Mao, Beile Gao
Frontiers in Microbiology.2019;[Epub] CrossRef
Neobacillus endophyticus sp. nov., an endophytic bacterium isolated from Selaginella involvens roots
Lingmin Jiang, Myoung Hui Lee, Jae Cheol Jeong, Dae-Hyuk Kim, Cha Young Kim, Suk Weon Kim, Jiyoung Lee
International Journal of Systematic and Evolutionary Microbiology .2019;[Epub] CrossRef
Stagnimonas aquatica gen. nov., sp. nov., a new member of the family Nevskiaceae isolated from a freshwater mesocosm
Shih-Yi Sheu, Tzu-Ying Chen, Chiu-Chung Young, Wen-Ming Chen
International Journal of Systematic and Evolutionary Microbiology.2019; 69(6): 1606. CrossRef
Hydrocarboniclastica marina gen. nov., sp. nov., a marine hydrocarbonoclastic bacterium isolated from an in situ enriched hydrocarbon-degrading consortium in sea sediment
Chunming Dong, Tiantian Ma, Renju Liu, Qiliang Lai, Zongze Shao
International Journal of Systematic and Evolutionary Microbiology.2019; 69(8): 2250. CrossRef
Anaerosacchariphilus polymeriproducens gen. nov., sp. nov., an anaerobic bacterium isolated from a salt field
Wonduck Kim, Sung-Hyun Yang, Mi-Jeong Park, Jihye Oh, Jung-Hyun Lee, Kae Kyoung Kwon
International Journal of Systematic and Evolutionary Microbiology .2019; 69(7): 1934. CrossRef
Flavobacterium baculatum sp. nov., a carotenoid and flexirubin-type pigment producing species isolated from flooded paddy field
Geeta Chhetri, Jiyoun Kim, Inhyup Kim, Minchung Kang, Byungjo Lee, Wonhee Jang, Taegun Seo
International Journal of Systematic and Evolutionary Microbiology .2019;[Epub] CrossRef
Oceaniradius stylonematis gen. nov., sp. nov., isolated from a red alga, Stylonema cornu-cervi
Sang Eun Jeong, Kyung Hyun Kim, Duckhyun Lhee, Hwan Su Yoon, Zhe-Xue Quan, En-Young Lee, Che Ok Jeon
International Journal of Systematic and Evolutionary Microbiology .2019; 69(7): 1967. CrossRef
Pradoshia eiseniae gen. nov., sp. nov., a spore-forming member of the family Bacillaceae capable of assimilating 3-nitropropionic acid, isolated from the anterior gut of the earthworm Eisenia fetida
Tilak Saha, Vivek K. Ranjan, Sriradha Ganguli, Subarna Thakur, Biswanath Chakraborty, Partha Barman, Wriddhiman Ghosh, Ranadhir Chakraborty
International Journal of Systematic and Evolutionary Microbiology.2019; 69(5): 1265. CrossRef
Rhizobium chutanense sp. nov., isolated from root nodules of Phaseolus vulgaris in China
Yunyun Huo, Wenjun Tong, Juanjuan Wang, Fang Wang, Wenqing Bai, Entao Wang, Peng Shi, Weimin Chen, Gehong Wei
International Journal of Systematic and Evolutionary Microbiology.2019; 69(7): 2049. CrossRef
Complete nitrification: insights into the ecophysiology of comammox Nitrospira
Hanna Koch, Maartje A. H. J. van Kessel, Sebastian Lücker
Applied Microbiology and Biotechnology.2019; 103(1): 177. CrossRef
Paraburkholderia telluris sp. nov., isolated from subtropical forest soil
Sen-yang Xiao, Zeng-hong Gao, Zi Yang, Jie-yi Bi, Li-hong Qiu
International Journal of Systematic and Evolutionary Microbiology.2019; 69(5): 1274. CrossRef
Pseudorhodobacter turbinis sp. nov., isolated from the gut of the Korean turban shell, Turbo cornutus
Yun-Seok Jeong, Woorim Kang, June-Young Lee, Hojun Sung, Hyun Sik Kim, Jeong-Eun Han, Euon Jung Tak, So-Yeon Lee, Jae-Yun Lee, Pil Soo Kim, Dong-Wook Hyun, Mi-Ja Jung, Jin-Woo Bae
International Journal of Systematic and Evolutionary Microbiology .2019;[Epub] CrossRef
Isolation and genome analysis of Winogradskyella algicola sp. nov., the dominant bacterial species associated with the green alga Dunaliella tertiolecta
Jaeho Song, Yeonjung Lim, Hye-Jin Jang, Yochan Joung, Ilnam Kang, Seong-Joo Hong, Choul-Gyun Lee, Jang-Cheon Cho
Journal of Microbiology.2019; 57(11): 982. CrossRef
Jannaschia marina sp. nov., isolated from the gut of a gastropod, Onchidium reevesii
Si Chen, Mengyuan He, Qiliang Lai, Ying Xu, Chenjing Shang
International Journal of Systematic and Evolutionary Microbiology .2019;[Epub] CrossRef
Allopseudarcicella aquatilis gen. nov., sp. nov., isolated from freshwater
Haneul Kim, Heeyoung Kang, Kiseong Joh
International Journal of Systematic and Evolutionary Microbiology.2019; 69(11): 3574. CrossRef
Paraburkholderia pallida sp. nov. and Paraburkholderia silviterrae sp. nov., isolated from forest soil
Sen-yang Xiao, Zeng-hong Gao, Qin-hua Lin, Li-hong Qiu
International Journal of Systematic and Evolutionary Microbiology.2019; 69(12): 3777. CrossRef
Aquincola rivuli sp. nov., isolated from a freshwater stream
Shih-Yi Sheu, Tsai-Ying Hsieh, Wen-Ming Chen
International Journal of Systematic and Evolutionary Microbiology .2019; 69(8): 2226. CrossRef
Flavobacterium amnicola sp. nov., isolated from a sub-tropical stream
Shih-Yi Sheu, Ya-Ping Guo, Wen-Ming Chen
International Journal of Systematic and Evolutionary Microbiology.2019; 69(8): 2283. CrossRef
Shimia thalassica sp. nov., and reclassification of Pseudopelagicola gijangensis as Shimia gijangensis comb. nov., and Thalassobius activus as Cognatishimia activa comb. nov.
David R. Arahal, Alexandra La Mura, Teresa Lucena, Lidia Rodrigo-Torres, Rosa Aznar, María J. Pujalte
International Journal of Systematic and Evolutionary Microbiology .2019; 69(11): 3405. CrossRef
Clostridium indicum sp. nov., a novel anaerobic bacterium isolated from the sludge of an industrial effluent
Krishna Gundawar, Sumeeta Kumari, Shikha Sharma, Vishakha Grover, Prabhu B. Patil, Suresh Korpole
International Journal of Systematic and Evolutionary Microbiology.2019; 69(3): 672. CrossRef
Peribacillus faecalis sp. nov., a moderately halophilic bacterium isolated from the faeces of a cow
Lingmin Jiang, Won Yong Jung, Zhun Li, Mi-Kyung Lee, Seung-Hwan Park, Se Won Kang, Jung-Sook Lee, Hyunjung Jung, Tai-Young Hur, Hyeun Bum Kim, Jae-Kyung Kim, Ju-Hoon Lee, Ju Huck Lee, Jiyoung Lee
International Journal of Systematic and Evolutionary Microbiology .2019;[Epub] CrossRef
Mucilaginibacter aquatilis sp. nov., Mucilaginibacter arboris sp. nov., and Mucilaginibacter ginkgonis sp. nov., novel bacteria isolated from freshwater and tree bark
Heeyoung Kang, Haneul Kim, Seokhyeon Bae, Kiseong Joh
International Journal of Systematic and Evolutionary Microbiology .2019;[Epub] CrossRef
Devosia naphthalenivorans sp. nov., isolated from East Pacific Ocean sediment
Yong Chen, Sidong Zhu, Danqiu Lin, Xing Wang, Jifang Yang, Jigang Chen
International Journal of Systematic and Evolutionary Microbiology .2019; 69(7): 1974. CrossRef
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A New record of four Penicillium species isolated from Agarum clathratum in Korea: Myung Soo Park , Seobihn Lee , Young Woon Lim; J. Microbiol. 2017;55(4):237-246. Published online January 26, 2017; DOI: https://doi.org/10.1007/s12275-017-6405-8

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Abstract

Agarum clathratum, brown algae, play important ecological roles in marine ecosystem, but can cause secondary environ-ment pollution when they pile up on the beach. In order to resolve the environment problem by A. clathratum, we focus to isolate and identify Penicillium because many species are well known to produce extracellular enzymes. A total of 32 Penicillium strains were isolated from A. clathratum sam-ples that collected from 13 sites along the mid-east coast of Korea in summer. They were identified based on morpho-logical characters and phylogenetic analysis using β-tubulin DNA sequences as well as a combined dataset of β-tubulin and calmodulin. A total of 32 strains were isolated and they were identified to 13 Penicillium species. The commonly iso-lated species were Penicillium citrinum, P. roseomaculatum, and Penicillium sp. Among 13 Penicillium species, four spe-cies – P. bilaiae, P. cremeogriseum, P. madriti, and P. rose-omaculatum – have not been previously recorded in Korea. For these four new species records to Korea, we provide mor-phological characteristics of each strain.

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Re-Identification on Korean Penicillium Sequences in GenBank Collected by Software GenMine
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Myung Soo Park, Jun Won Lee, Sung Hyun Kim, Ji-Hyun Park, Young-Hyun You, Young Woon Lim
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The diversity and ecological roles of Penicillium in intertidal zones
Myung Soo Park, Seung-Yoon Oh, Jonathan J. Fong, Jos Houbraken, Young Woon Lim
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Fungal Diversity and Enzyme Activity Associated with the Macroalgae, Agarum clathratum
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Research Support, Non-U.S. Gov'ts

Luteimonas dalianensis sp. nov., an Obligate Marine Bacterium Isolated from Seawater: Yanjuan Xin , Xupeng Cao , Peichun Wu , Song Xue; J. Microbiol. 2014;52(9):729-733. Published online August 2, 2014; DOI: https://doi.org/10.1007/s12275-014-3610-6

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Abstract

A marine bacterial strain, designated OB44-3T, was isolated from a crude oil-contaminated seawater sample collected near Dalian Bay, China. Cells of strain OB44-3T were Gramnegative, aerobic, rod-shaped, and oxidase- and catalasepositive. The major fatty acids were branched-chain saturated iso-C15:0 (27.9%) and unsaturated iso-C17:1 ω9c (14.8%). The DNA G+C content was 64.6 mol%. Phylogenetic analysis based on the 16S rRNA gene sequence indicated that strain OB44-3T was a member of the genus Luteimonas (95–96% 16S rRNA gene sequence similarity); its closest neighbors were the type strains of Luteimonas terricola (96% sequence similarity), Luteimonas mephitis (96%), and Luteimonas lutimaris (96%). On the basis of phenotypic, chemotaxonomic, and phylogenetic distinctiveness, strain OB44-3T was considered to represent a novel species of the genus Luteimonas. The name Luteimonas dalianensis sp. nov. is proposed, with strain OB44-3T (=CGMCC 1.12191T =JCM 18136T) as the type strain.

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Three novel Luteimonas species from a root and rhizosphere soil of Kalidium cuspidatum: Luteimonas endophytica sp. nov., Luteimonas rhizosphaericola sp. nov. and Luteimonas kalidii sp. nov.
Hua-Mei Wei, Lian Xu, Xu Zhang, Ji-Quan Sun
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Luteimonas suaedae sp. nov., a novel bacterium isolated from rhizosphere of Suaeda aralocaspica (Bunge) Freitag & Schütze
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Luteimonas galliterrae sp. nov., isolated from poultry farm soil
Lei Shen, Miao-miao An, Xiang-wei He, Guo-zhu Zhao
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Muhammad Zubair Siddiqi, Jun Mo Yeon, Hanna Choi, Jae Hag Lee, Sang Yong Kim, Ji-Hyang Wee, Wan Taek Im
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Molecular Serotyping of Salmonella enterica by Complete rpoB Gene Sequencing: Won-Jin Seong , Hyuk-Joon Kwon , Tae-Eun Kim , Deog-Yong Lee , Mi-Sun Park , Jae-Hong Kim; J. Microbiol. 2012;50(6):962-969. Published online December 30, 2012; DOI: https://doi.org/10.1007/s12275-012-2547-x

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Abstract: Serotyping has been the gold standard for identifying Salmonella, but it requires large amounts of standard antisera. Multilocus sequence typing (MLST) has been applied to identify Salmonella serovars, but the recombination of 4–7 housekeeping genes and multiple analytic steps diminish its applicability. In the present study, we determined the complete sequences of the RNA polymerase beta subunit gene (rpoB) and 7 housekeeping genes (aroC, dnaN, hemD, hisD, purE, sucA, and thrA) for 76 strains of 33 Salmonella enterica serovars and conducted phylogenetic analyses together with the corresponding gene sequences of 24 reference strains registered in the GenBank database. Based on the phylogenetic analyses, 100 strains from 40 serovars and 91 strains from 37 serovars were classified into 60 rpoB (RST) and 49 multilocus sequence types (ST), respectively. The nucleotide similarities were 98.8–100% and 96.9–100% for the complete rpoB gene and the seven concatenated housekeeping genes, respectively. The strains of 35 and 30 serovars formed serovar-specific branches or clusters in the rpoB and housekeeping gene phylogenetic trees, respectively. Therefore, complete rpoB gene sequencing and phylogenetic analysis may be a useful method for identifying Salmonella serovars that is a simpler, more cost-effective, and less time-consuming alternative or complementary method to MLST and conventional serotyping.

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Flavobacterium cheonhonense sp. nov., Isolated from a Freshwater Reservoir: Siwon Lee , Jung-Hwan Oh , Hang-Yeon Weon , Tae-Young Ahn; J. Microbiol. 2012;50(4):562-566. Published online July 21, 2012; DOI: https://doi.org/10.1007/s12275-012-1229-z

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Abstract: A novel bacterium, designated strain ARSA-15T, was isolated from a freshwater sample collected from the Cheonho reservoir, Cheonan, Republic of Korea. The isolate was deepyellow pigment, Gram-negative, rod-shaped, non-motile, and catalase- and oxidase-positive. Phylogenetic analysis based on 16S rRNA gene sequences showed that the isolate belongs to the genus Flavobacterium, and shared less than 97% sequence similarity with recognized Flavobacterium species. The novel species was able to grow at 10–37°C, pH 6.5–10.0, and in 0–0.5% (w/v) NaCl concentrations. Chemotaxonomically, iso-C15:1, iso-C15:0, and iso-C16:0 were observed to be the predominant cellular fatty acid, and menaquinone-6 (MK-6) was the predominant respiratory quinone. The major polar lipid patterns of strain ARSA-19T was phosphatidylethanolamine, unknown aminolipid (AL1 and AL2), and unidentified polar lipids (L1, L2, and L3). The genomic DNA G+C content of the isolate was 39.2 mol%. On the basis of polyphasic approach, strain ARSA-15T represents a novel species of the genus Flavobacterium, for which the name Flavobacterium cheonhonense sp. nov. is proposed. The type strain is ARSA-15T (=KACC 14967T =KCTC 23180T =JCM 17064T).

NOTE] Sawadaea koelreuteriae comb. nov., a Powdery Mildew of Koelreuteria paniculata: Hyeon-Dong Shin , Mi-Jeong Park; J. Microbiol. 2011;49(5):862-866. Published online November 9, 2011; DOI: https://doi.org/10.1007/s12275-011-1479-1

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Abstract: A powdery mildew parasitizing Koelreuteria spp. was first described under the name Uncinula koelreuteriae Miyake and later transferred to the genus Typhulochaeta. Based on morphological and molecular data of several herbarium specimens collected from Korea, the generic placement of Typhulochaeta is discussed and T. koelreuteriae is combined in the genus Sawadaea. Redescription and epitypification of this species is provided hereby.

Research Support, Non-U.S. Gov'ts

Rapid Discrimination of Potato Scab-Causing Streptomyces Species Based on the RNase P RNA Gene Sequences: Hang-Yeon Weon , Jaekyeong Song , Byung-Yong Kim , On-Suk Hur , In-Cheol Park , Joo-Won Suh; J. Microbiol. 2011;49(5):791-796. Published online November 9, 2011; DOI: https://doi.org/10.1007/s12275-011-1279-7

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Abstract: Scab disease significantly damages potatoes and other root crops. Some Streptomyces species have been reported as potato-scab pathogens. Identification of the phytopathogenic Streptomyces is mainly done on the basis of the 16S rRNA gene, but use of this gene has some limitations for discriminating these strains because they share high similarities of 16S rRNA gene sequences. We tested the RNase P RNA (rnpB) gene as a taxonomic marker to clarify the relationship among closely related scab-causing Streptomyces strains. The rnpB genes were analyzed for 41 strains including 9 isolates from Jeju, Korea. There were 4 highly variable regions including nucleotide gaps in the rnpB genes. Interspecies similarity of the rnpB gene in tested Streptomyces strains was lower than about 97%, while the intraspecies similarity was higher than about 98%. Phylogenetic analysis demonstrated that the rnpB tree has similar topology to the 16S rRNA gene tree, but produces a more divergent phyletic lineage. These results revealed that the rnpB gene could be used as a powerful taxonomic tool for rapid differentiation of closely related Streptomyces species. In addition, it was also suggested that the variable regions marked as α, β, γ, and δ in the rnpB gene could be useful markers for the detection of specific Streptomyces species.

Genome Sequence Analysis of H5N1 Influenza A Virus Isolated from a Vietnamese in 2007: Dieu Linh Tran , Kangmo Kim , Jae Yoo Choi , Hyun Dong Paik , Si-Woo Choi , Jin Yeul Ma , Sung-Soon Kim , Sung Joon Ahn , Young Bong Kim; J. Microbiol. 2011;49(2):274-279. Published online May 3, 2011; DOI: https://doi.org/10.1007/s12275-011-0311-2

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Abstract: Highly pathogenic H5N1 avian influenza A virus (AIV) crossed the species barrier and caused a number of deaths in humans in Vietnam and 14 other countries. Since the last report of human H5N1 infection in November 2005, the first documented H5N1 human infection was reported in June 2007 in Vietnam and was followed by 7 more cases, including 5 fatalities. In this study, we isolated and analyzed the full length of the H5N1 genome from a sample from the first patient in 2007. Phylogenetic analysis of eight genomic segments of the H5N1 virus strain (A/Vietnam/HN/2007, VNH07) revealed that this strain appears to be of genotype V and contains the HA gene, which is classified into clade 2.3.4. The deduced amino acid sequence of the HA protein has a typical affinity sequence for α2,3 linkage (SAα2,3-Gal) receptors and typical multibasic cleavage sequences. Compared with other H5N1 isolates, VNH07 showed that the possible reassortments for the NA and NP segments occurred between A/goose/Guangxi/3017/2005-like isolates (2.3.2) and A/human/Zhejiang/16/2006-like isolates (2.3.4).

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