Paenibacillus filicis sp. nov., Isolated from the Rhizosphere of the Fern

Byung-Chun Kim; Mi Na Kim; Kang Hyun Lee; Sun Beom Kwon; Kyung Sook Bae; Kee-Sun Shin

doi:10.1007/s12275-009-0266-8

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Paenibacillus filicis sp. nov., Isolated from the Rhizosphere of the Fern: Byung-Chun Kim , Mi Na Kim , Kang Hyun Lee , Sun Beom Kwon , Kyung Sook Bae , Kee-Sun Shin; Journal of Microbiology 2009;47(5):524-529.
DOI: https://doi.org/10.1007/s12275-009-0266-8
Published online: October 24, 2009

Biological Resources Center, KRIBB, Daejeon 305-806, Republic of KoreaBiological Resources Center, KRIBB, Daejeon 305-806, Republic of Korea

Corresponding author: Kee-Sun Shin , Tel: 82-42-860-4624,

Received: 25 August 2009 • Accepted: 6 October 2009

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Abstract

A Gram-positive and endospore-forming bacterial strain, designated S4T, was isolated from the rhizosphere of ferns in Daejeon, Republic of Korea. This isolate is strictly aerobic, motile, and rod-like in shape, and it is positive for catalase, oxidase, esterase lipase, and β-galactosidase activities. In addition, this strain grows when cultured at temperatures between 15 and 37°C and at pH values ranging from 5.5 to 9.0. The DNA G+C content was determined to be 53.2 mol%. Strain S4T has meso-diaminopimelic acid in the cell-wall peptidoglycan; it also contains menaquinone 7 (MK-7) as the predominant isoprenoid quinone and anteiso-C15:0 (57.5%), iso-C16:0 (11.3%), and C16:0 (9.4%) as the major cellular fatty acids. Phylogenetic analysis based on alignments of the 16S rRNA gene sequence showed that S4T is affiliated with a cluster of strains within the genus Paenibacillaceae and is most closely related to Paenibacillus chinjuensis WN9T, with 96.8% similarity. Based on the phylogenetic and phenotypic characteristics of strain S4T, we believe that this isolate should be distinguished from all type species of the genus Paenibacillus and should thus represent a novel taxon within the genus Paenibacillus. We propose naming this type species Paenibacillus filicis sp. nov. for the rhizosphere isolate; the type strain will be known as S4T (=KCTC 13693T =KACC 14197T =JCM 16417T).

Keywords: novel bacterium;fern;rhizosphere;Paenibacillus filicis

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Paenibacillus filicis sp. nov., Isolated from the Rhizosphere of the Fern

J. Microbiol. 2009;47(5):524-529. Published online October 24, 2009

DOI: https://doi.org/10.1007/s12275-009-0266-8

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