Paralcaligenes ureilyticus gen. nov., sp. nov. Isolated from Soil of a Korean Ginseng Field

Soo-Jin Kim; Seung-Hee Yoo; Hang-Yeon Weon; Yi-Seul Kim; Rangasamy Anandham; Jang-Sun Suh; Soon-Wo Kwon

doi:10.1007/s12275-011-0076-7

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Paralcaligenes ureilyticus gen. nov., sp. nov. Isolated from Soil of a Korean Ginseng Field: Soo-Jin Kim ¹, Seung-Hee Yoo ¹, Hang-Yeon Weon ¹, Yi-Seul Kim ¹, Rangasamy Anandham ², Jang-Sun Suh ¹, Soon-Wo Kwon ¹; Journal of Microbiology 2011;49(3):502-507.
DOI: https://doi.org/10.1007/s12275-011-0076-7
Published online: June 30, 2011

¹Korean Agricultural Culture Collection (KACC), Agricultural Microbiology Team, National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, Republic of Korea, ²Department of Agricultural Microbiology, Agricultural College and Research Institute, Madurai, India

Corresponding author: Soon-Wo Kwon , Tel: +82-31-299-1860,

Received: 23 February 2010 • Accepted: 9 February 2011

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Abstract

A bacterial strain, designated GR24-5T, was isolated from soil cultivated with Korean ginseng. Cells were Gram-negative, strictly aerobic, catalase- and oxidase-positive, non-spore-forming motile rods. Based on the 16S rRNA gene sequence, strain GR24-5T could be assigned to the family Alcaligenaceae. Strain GR24-5T showed the highest sequence similarities with Parapusillimonas granuli Ch07T (97.1%), Pusillimonas noertemannii BN9T (96.9%), Pigmentiphaga kullae DSM 13608T (96.5%), and Castellaniella defragrans 54PinT (96.3%). Strain GR24-5T demonstrated a low DNA-DNA relatedness (23%) with P. granuli Ch07T. The major respiratory quinone is ubiquinone 8 (Q-8) and the major fatty acids are C16:0, C17:0 cyclo, and summed feature 1 (C14:03-OH/iso-C16:1 I/C12:0 alde). Putrescine, spermidine, and 2-hydroxyputrescine are the major polyamines. The major polar lipids are phosphatidylmethylethanolamine, phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, and an unknown aminophospholipid. Polar lipid patterns of strain GR24-5T were unique in having a large amount of phosphatidylmethylethanolamine. Based on phylogenetic analysis and physiological and biochemical characteristics, strain GR245T represents a novel genus and species, for which the name Paralcaligenes ureilyticus gen. nov., sp. nov. is proposed. The type strain of P. aralcaligenes ureilyticus is GR24-5T (=KACC 13888T =DSM 24591T).

Keywords: Paralcaligenes ureilyticus;16S rRNA gene sequence;taxonomy

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Paralcaligenes ureilyticus gen. nov., sp. nov. Isolated from Soil of a Korean Ginseng Field

J. Microbiol. 2011;49(3):502-507. Published online June 30, 2011

DOI: https://doi.org/10.1007/s12275-011-0076-7

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