Shewanella upenei sp. nov., a Lipolytic Bacterium Isolated from Bensasi Goatfish Upeneus bensasi

Kyung-Kil Kim; Young-Ok Kim; Sooyeon Park; So-Jung Kang; Bo-Hye Nam; Doo Nam Kim; Tae-Kwang Oh; Jung-Hoon Yoon

doi:10.1007/s12275-011-0175-5

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Shewanella upenei sp. nov., a Lipolytic Bacterium Isolated from Bensasi Goatfish Upeneus bensasi: Kyung-Kil Kim ¹, Young-Ok Kim ¹, Sooyeon Park ², So-Jung Kang ², Bo-Hye Nam ¹, Doo Nam Kim ³, Tae-Kwang Oh ², Jung-Hoon Yoon ²; Journal of Microbiology 2011;49(3):381-386.
DOI: https://doi.org/10.1007/s12275-011-0175-5
Published online: June 30, 2011

¹Biotechnology Research Division, National Fisheries Research and Development Institute (NFRDI), Busan 619-705, Republic of Korea, ²Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon 305-806, Republic of Korea, ³Fisheries Resources Research Division, National Fisheries Research and Development Institute (NFRDI), Busan 619-705, Republic of Korea

Corresponding author: Jung-Hoon Yoon , Tel: +82-42-860-4276,

Received: 10 May 2010 • Accepted: 17 January 2011

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Abstract

A Gram-staining-negative, motile, non-spore-forming and rod-shaped bacterial strain, 20-23RT, was isolated from intestine of bensasi goatfish, Upeneus bensasi, and its taxonomic position was investigated by using a polyphasic study. Phylogenetic analyses based on 16S rRNA gene sequences revealed that strain 20-23RT belonged to the genus Shewanella. Strain 20-23RT exhibited 16S rRNA gene sequence similarity values of 99.5, 99.2, and 97.5% to Shewanella algae ATCC 51192T, Shewanella haliotis DW01T, and Shewanella chilikensis JC5T, respectively. Strain 20-23RT exhibited 93.1-96.0% 16S rRNA gene sequence similarity to the other Shewanella species. It also exhibited 98.3-98.4% gyrB sequence similarity to the type strains of S. algae and S. haliotis. Strain 20-23RT contained simultaneously both menaquinones and ubiquinones; the predominant menaquinone was MK-7 and the predominant ubiquinones were Q-8 and Q-7. The fatty acid profiles of strain 20-23RT, S. algae KCTC 22552T and S. haliotis KCTC 12896T were similar; major components were iso-C15:0, C16:0, C16:1 ω7c and/or iso-C15:0 2-OH and C17:1 ω8c. The DNA G+C content of strain 20-23RT was 53.9 mol%. Differential phenotypic properties and genetic distinctiveness of strain 20-23RT, together with the phylogenetic distinctiveness, revealed that this strain is distinguishable from recognized Shewanella species. On the basis of the data presented, strain 20-23RT represents a novel species of the genus Shewanella, for which the name Shewanella upenei sp. nov. is proposed. The type strain is 20-23RT (=KCTC 22806T =CCUG 58400T).

Keywords: Shewanella upenei;taxonomy;new species

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Shewanella upenei sp. nov., a Lipolytic Bacterium Isolated from Bensasi Goatfish Upeneus bensasi

J. Microbiol. 2011;49(3):381-386. Published online June 30, 2011

DOI: https://doi.org/10.1007/s12275-011-0175-5

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