Shift of Phylogenic Position in Megalocytiviruses Based on Three Different Genes

Se Ryun Kwon; Toyohiko Nishizawa; Jong-Won Park; Myung-Joo Oh

doi:10.1007/s12275-011-1500-8

Articles

Page Path: HOME > J. Microbiol > Volume 49(6); 2011 > Article

Research Support, Non-U.S. Gov't
Shift of Phylogenic Position in Megalocytiviruses Based on Three Different Genes: Se Ryun Kwon ¹, Toyohiko Nishizawa ², Jong-Won Park ³, Myung-Joo Oh ²; Journal of Microbiology 2011;49(6):981-986.
DOI: https://doi.org/10.1007/s12275-011-1500-8
Published online: December 28, 2011

¹Department of Aquatic Life Medical Sciences, Sunmoon University, Chung Nam 336-708, Republic of Korea, ²Department of Aqualife Medicine, Chonnam National University, Yeosu 550-749, Republic of Korea, ³Genetics & Breeding Research Center, National Fisheries Research & Development Institute, Geoje 656-842, Republic of Korea¹Department of Aquatic Life Medical Sciences, Sunmoon University, Chung Nam 336-708, Republic of Korea, ²Department of Aqualife Medicine, Chonnam National University, Yeosu 550-749, Republic of Korea, ³Genetics & Breeding Research Center, National Fisheries Research & Development Institute, Geoje 656-842, Republic of Korea

Corresponding author: Toyohiko Nishizawa , Tel: +82-61-659-7178,

Received: 10 October 2011 • Accepted: 17 November 2011

prev next

55 Views
0 Download
9 Crossref
12 Scopus

Full Article

Abstract

Major capsid protein (MCP), the adenosine triphosphatase (ATPase), and the PstI fragment genes from five Japanese and three Korean megalocytivirus isolates were sequenced and phylogenetically analyzed with known megalocytiviruses. Phylogenetic trees formed three major clusters (M1, M2, and M3 or P1, P2, and P3), and genogroup I was divided into two minor clusters (M1a/M1b and P1a/P1b) using three target genes. Sequence identity was >97% within each cluster, except cluster II of the PstI fragment (>94% of sequence identity). Interestingly, different genotyping patterns were observed for the same isolates depending on the gene analyzed. The JPN-YelTail and JPN-BfTuna isolates located in the minor M1a cluster, based on MCP and ATPase nucleotide sequences, appeared in the minor P1b cluster based on the PstI fragment, suggesting a shift of phylogenic position in megalocytiviruses. Further study will be conducted to compare the viral antigenicity and pathogenicity between the two isolates showing the shift of phylogenic position and the other isolates clustered within genogroup I.

Keywords: Red seabream iridovirus;RSIVD;MCP gene;PstI fragment gene;phylogeny;megalocytivirus

Figure & Data

References

Citations

Citations to this article as recorded by

Analysis of the transcriptomic profiles of Mandarin fish (Siniperca chuatsi) infected with red sea bream iridovirus (RSIV)
Yanbing Zhang, Chunjie Zhang, Zheling Zhang, Wei Sun, Xiaojun Zhang, Xiaodan Liu
Microbial Pathogenesis.2023; 174: 105921. CrossRef
Detection of megalocytivirus in Oreochromis niloticus and Pseudoplatystoma corruscans in Brazil
AA Fonseca, M Laguardia-Nascimento, AP Scotá Ferreira, CA Pinto, TR Pereira Freitas, AV Rivetti Júnior, VS Ferreira Homem, MF Camargos
Diseases of Aquatic Organisms.2022; 149: 25. CrossRef
Multiple Passages of Grunt Fin Cells Persistently Infected with Red Seabream Iridovirus (RSIV) at 15ºC or 30ºC to Yield Uninfected Cells
So-Young Oh, Toyohiko Nishizawa
Journal of Aquatic Animal Health.2016; 28(4): 214. CrossRef
Establishment of rock bream Oplegnathus fasciatus embryo (RoBE-4) cells with cytolytic infection of red seabream iridovirus (RSIV)
So-Young Oh, Toyohiko Nishizawa
Journal of Virological Methods.2016; 238: 1. CrossRef
Potential for a live red seabream iridovirus (RSIV) vaccine in rock bream Oplegnathus fasciatus at a low rearing temperature
So-Young Oh, Myung-Joo Oh, Toyohiko Nishizawa
Vaccine.2014; 32(3): 363. CrossRef
A Novel Disorder of Cultured Juvenile Greater Amberjack Seriola dumerili Characterized by Renomegaly and Splenomegaly
Shinpei Wada, Osamu Kurata, Hitoshi Hatakeyama, Azumi Yamashita, Shusaku Takagi, Toyohiko Nishizawa, Hiroshi Yokoyama
Fish Pathology.2014; 49(1): 7. CrossRef
Virions proteins of an RSIV-type megalocytivirus from spotted knifejaw Oplegnathus punctatus (SKIV-ZJ07)
Fan Shuang, Yongwen Luo, Xiao-peng Xiong, Shaoping Weng, Yiming Li, Jianguo He, Chuanfu Dong
Virology.2013; 437(2): 89. CrossRef
Viral susceptibility, transfection and growth of SPB – a fish neural progenitor cell line from the brain of snubnose pompano, Trachinotus blochii (Lacépède)
C‐M Wen, C‐C Ku, C‐S Wang
Journal of Fish Diseases.2013; 36(7): 657. CrossRef
RSIV is Probably Insensitive to the Transient Innate Immune Response Induced by Administration of Poly(I:C), a Synthetic Double-Stranded RNA
Jong-Oh Kim, So-Young Oh, Takanori Matsui, Myung-Joo Oh, Toyohiko Nishizawa
Fish Pathology.2012; 47(4): 137. CrossRef

Cite this Article

Cite this Article: export Copy Download Format; Close

Download Citation

Download a citation file in RIS format that can be imported by all major citation management software, including EndNote, ProCite, RefWorks, and Reference Manager.

Format:

RIS — For EndNote, ProCite, RefWorks, and most other reference management software
BibTeX — For JabRef, BibDesk, and other BibTeX-specific software

Include:

Citation for the content below
Citation and abstract for the content below

Shift of Phylogenic Position in Megalocytiviruses Based on Three Different Genes

J. Microbiol. 2011;49(6):981-986. Published online December 28, 2011

DOI: https://doi.org/10.1007/s12275-011-1500-8

Related articles