Abstract
This study aimed to profile the microflora in infected root
canals before and after root canal treatment using cultureindependent
methods
. Six infected root canals in singlerooted
teeth with periapical lesions from five subjects were
included. Quantification of total bacteria was performed by
real-time PCR with primers targeting 16S rRNA genes.
PCR products with universal 16S rRNA gene primers were
cloned and partially sequenced, and bacterial identification
at the species level was performed by comparative analysis
with the GenBank database. The concentration of extracted
DNA before treatment was higher than that after root canal
treatment, although the difference was not statistically
significant. Sequence analysis revealed that oral bacteria
such as Fusobacterium, Streptococcus, Olsenella, and Pseudoramibacter
detected in cases before root canal treatment
disappeared after treatment. These results suggest that the
root canal microflora are distinct before and after root
canal treatment, and that treatment changes the microflora
in both quantity and quality.
Citations
Citations to this article as recorded by

- Dental Deposits Are Differentially Associated With Periodontal Conditions and the Number of Teeth in Japanese Community‐Dwelling Individuals: The Nagasaki Islands Study
Masayuki Oohira, Masayasu Kitamura, Kanako Higuchi, Mark Luigi Fabian Capati, Mami Tamai, Saki Ichinose, Yasunori Yamashita, Yukio Ozaki, Eijiro Sakamoto, Yumiko Kawashita, Sakiko Soutome, Takahiro Maeda, Atsushi Kawakami, Toshiyuki Saito, Atsutoshi Yoshi
Clinical and Experimental Dental Research.2025;[Epub] CrossRef - Association between total functional tooth unit score and hemoglobin A1c levels in Japanese community-dwelling individuals: the Nagasaki Islands study
Masayuki Oohira, Masayasu Kitamura, Kanako Higuchi, Mark Luigi Fabian Capati, Mami Tamai, Saki Ichinose, Yumiko Kawashita, Sakiko Soutome, Takahiro Maeda, Atsushi Kawakami, Atsutoshi Yoshimura
BMC Oral Health.2024;[Epub] CrossRef -
Methanobrevibacter oralis
: a comprehensive review
Virginie Pilliol, Boualam Mahmoud Abdelwadoud, Hamieh Aïcha, Tellissi Lucille, Aboudharam Gérard, Tassery Hervé, Drancourt Michel, Grine Ghiles, Terrer Elodie
Journal of Oral Microbiology.2024;[Epub] CrossRef - Prevalence of Fusobacterium Species in Endodontic Infections Detected With Molecular Methods: Systematic Review and Meta-Analysis
Hatem A. Alhadainy, Amany H. Abdel-karim, Ashraf F. Fouad
Journal of Endodontics.2023; 49(10): 1249. CrossRef - Dental biofilm infections – an update
Tove Larsen, Nils‐Erik Fiehn
APMIS.2017; 125(4): 376. CrossRef - Analysis of Subgingival Plaque Ability to Stimulate Toll‐Like Receptor 2 and 4
S.M. Ziauddin, Jorge Luis Montenegro Raudales, Kayo Sato, Hidenobu Yoshioka, Yukio Ozaki, Takashi Kaneko, Atsutoshi Yoshimura, Yoshitaka Hara
Journal of Periodontology.2016; 87(9): 1083. CrossRef - Status of bacterial colonization in teeth associated with different types of pulpal and periradicular disease: A scanning electron microscopy analysis
Yan-Hua Huang, Si-Jing Xie, Nan-Nan Wang, Jiu-Yu Ge
Journal of Dental Sciences.2015; 10(1): 95. CrossRef - Investigation of Cultivable Bacteria Isolated from Longstanding Retreatment-resistant Lesions of Teeth with Apical Periodontitis
Fernanda G.C. Signoretti, Brenda P.F.A. Gomes, Francisco Montagner, Rogério C. Jacinto
Journal of Endodontics.2013; 39(10): 1240. CrossRef - Preliminary molecular analysis of bacterial composition in periapical lesions with primary endodontic infections of deciduous teeth
Jia-jian SHANG, Qiu-bo YANG, Huan-ying ZHAO, Shuang CAI, Yan ZHOU, Zheng SUN
Chinese Medical Journal.2013; 126(16): 3112. CrossRef - Rapid Quantification of Bacteria in Infected Root Canals Using Fluorescence Reagents and a Membrane Filter: A Pilot Study on Its Clinical Application to the Evaluation of the Outcomes of Endodontic Treatment
Takuichi Sato, Keiko Yamaki, Naoko Ishida, Megumi Shoji, Emika Sato, Yuki Abiko, Kazuhiro Hashimoto, Yasuhisa Takeuchi, Junko Matsuyama, Hidetoshi Shimauchi, Nobuhiro Takahashi
International Journal of Dentistry.2012; 2012: 1. CrossRef