Baekduia soli gen. nov., sp. nov., a novel bacterium isolated from the soil of Baekdu Mountain and proposal of a novel family name, Baekduiaceae fam. nov.

Dong-Shan An; Muhammad Zubair Siddiqi; Kyoung-Ho Kim; Hong-Shan Yu; Wan-Taek Im

doi:10.1007/s12275-018-7107-6

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Baekduia soli gen. nov., sp. nov., a novel bacterium isolated from the soil of Baekdu Mountain and proposal of a novel family name, Baekduiaceae fam. nov.: Dong-Shan An ¹, Muhammad Zubair Siddiqi ^2,3, Kyoung-Ho Kim ⁴, Hong-Shan Yu ⁵, Wan-Taek Im ^2,3; Journal of Microbiology 2018;56(1):24-29.
DOI: https://doi.org/10.1007/s12275-018-7107-6
Published online: January 4, 2018

¹Department of Biological Sciences, University of Calgary, Calgary T2N 1N4, Canada, ²Department of Biotechnology, Hankyong National University, Anseong 17579, Republic of Korea, ³Genomic Informatics Center, Hankyong National University, Anseong 17579, Republic of Korea, ⁴Department of Microbiology, Pukyong National University, Pusan 48513, Republic of Korea, ⁵College of Bio & Food Technology, Dalian Polytechnic University, Dalian 116034, P. R. China¹Department of Biological Sciences, University of Calgary, Calgary T2N 1N4, Canada, ²Department of Biotechnology, Hankyong National University, Anseong 17579, Republic of Korea, ³Genomic Informatics Center, Hankyong National University, Anseong 17579, Republic of Korea, ⁴Department of Microbiology, Pukyong National University, Pusan 48513, Republic of Korea, ⁵College of Bio & Food Technology, Dalian Polytechnic University, Dalian 116034, P. R. China

Corresponding author: Wan-Taek Im , Tel: +82-31-6705335,

Received: 12 March 2017 • Revised: 15 November 2017 • Accepted: 17 November 2017

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Abstract

A taxonomic study was conducted on BR7-21T, a bacterial strain isolated from the soil of a ginseng field in Baekdu Mountain. Comparative studies of the 16S rRNA gene sequence showed that the isolate was most closely related to Conexibacter woesei DSM 14684T, Solirubrobacter pauli ATCC BAA-492T, Patulibacter minatonensis JCM 12834T, with 93.8%, 92.4%, and 91.5% sequence similarity, respectively; each genus represented a family in the order Solirubrobacterales. Strain BR7-21T was Gram-reaction positive, non-spore forming, aerobic, non-motile, and short rod-shaped. It grew well on half-strength R2A medium. The G + C content of the genomic DNA was 73.9%. It contained meso-diaminopimelic acid in the cell wall and the major menaquinones were MK-7(H4) and MK-8(H4). The major fatty acids were summarized as (C16:1 ω7c/iso-C15:0 2-OH), iso-C16:0, and C17:0 cyclo. On the basis of polyphasic evidence, it was proposed that strain BR7- 21T should be placed in a new genus and species, for which the name Baekduia soli gen. nov., sp. nov. was proposed with the type strain BR7-21T (= KCTC 22257T = LMG 24797T). The family Baekduiaceae fam. nov. is proposed to encompass the genus Baekduia gen. nov.

Keywords: polyphasic taxonomy;Baekduia soli;Baekdu Mountain;16S rRNA gene;ginseng field

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Baekduia soli gen. nov., sp. nov., a novel bacterium isolated from the soil of Baekdu Mountain and proposal of a novel family name, Baekduiaceae fam. nov.

J. Microbiol. 2018;56(1):24-29. Published online January 4, 2018

DOI: https://doi.org/10.1007/s12275-018-7107-6

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