Nucleotide Sequence and Secondary Structure of 5S rRNA from Sphingobium chungbukense DJ77

Hae-Ryong Kwon; Young-Chang Kim

doi:2486 [pii]

Research Support, Non-U.S. Gov't
Nucleotide Sequence and Secondary Structure of 5S rRNA from Sphingobium chungbukense DJ77: Hae-Ryong Kwon , Young-Chang Kim; Journal of Microbiology 2007;45(1):79-82
DOI: https://doi.org/2486 [pii]

School of Life Sciences, Chungbuk National University, Cheongju, Chungbuk 361-763, Republic of KoreaSchool of Life Sciences, Chungbuk National University, Cheongju, Chungbuk 361-763, Republic of Korea

Corresponding author: Young-Chang Kim , Tel: 82-43-261-2302,

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Abstract

The 5S rRNA gene from Sphingobium chungbukense DJ77 was identified. The secondary structure of the 199-base-long RNA was proposed. The two-base-long D loop was the shortest among all of the known 5S rRNAs. The U19-U64 non-canonical pair in the helix II region was uniquely found in strain DJ77 among all of the sphingomonads.

Keywords: 5S ribosomal RNA; Sphingobium chungbukense; secondary structure; phylogenetic analysis; organization of rRNA operon

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Nucleotide Sequence and Secondary Structure of 5S rRNA from Sphingobium chungbukense DJ77

J. Microbiol. 2007;45(1):79-82.

DOI: https://doi.org/2486 [pii]

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