Different Planctomycetes Diversity Patterns in Latitudinal Surface Seawater of the Open Sea and in Sediment

Qinglong Shu; Nianzhi Jiao

doi:10.1007/s12275-008-0002-9

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Different Planctomycetes Diversity Patterns in Latitudinal Surface Seawater of the Open Sea and in Sediment: Qinglong Shu , Nianzhi Jiao; Journal of Microbiology 2008;46(2):154-159.
DOI: https://doi.org/10.1007/s12275-008-0002-9
Published online: June 11, 2008

State Key Laboratory of Marine Environmental Science, Xiamen University, Xiamen 361005, P. R. China

Corresponding author: Nianzhi Jiao , Tel: 86-592-218-5752,

Received: 3 January 2008 • Accepted: 11 February 2008

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Abstract

The 16S rRNA gene approach was applied to investigate the diversity of Planctomycetes in latitudinal surface seawater of the Western Pacific Ocean. The results revealed that the Pirellula-Rhodopirellula-Blastopirellula clade dominated the Planctomycetes community at all surface seawater sites while the minority genera Gemmata and Planctomyces were only found at sites H5 and H2 respectively. Although the clone frequency of the PRB clade seemed stable (between 83.3% and 94.1%) for all surface seawater sites, the retrieved Pirellula-Rhodopirellula-Blastopirellula clade presented unexpected diversity. Interestingly, low latitude seawater appeared to have higher diversity than mid-latitudes. ∫-LIBSHUFF software analysis revealed significantly different diversity patterns between in latitudinal surface seawater and in the sediment of South China Sea station M2896. Our data suggested that different hydrological and geographic features contributed to the shift of Planctomycetes diversity in marine environments. This is, to our knowledge, the first systematic assessment of Planctomycetes in latitudinal surface seawater of the open sea and the first comparison of diversity pattern between surface seawater and sediments and has broadened our understanding of Planctomycetes diversity in marine environments.

Keywords: Planctomycetes;diversity;seawater;16S rRNA gene

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Antonie van Leeuwenhoek.2018; 111(6): 841. CrossRef
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Different Planctomycetes Diversity Patterns in Latitudinal Surface Seawater of the Open Sea and in Sediment

J. Microbiol. 2008;46(2):154-159. Published online June 11, 2008

DOI: https://doi.org/10.1007/s12275-008-0002-9

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