

Three bacterial strains, W99T, S113T, and S268T, were isolated from marine algae and subjected to polyphasic taxonomic characterization. Phylogenetic and phylogenomic analyses placed W99T within the genus Shimia, whereas S113T and S268T formed two distinct genus-level lineages within the family Roseobacteraceae. The three isolates were Gram-stain-negative, non-motile, and obligately aerobic, with optimum growth at 25, 25, and 30°C, respectively, and at 2.0% (w/v) NaCl. Ubiquinone-10 was the sole respiratory quinone in all three strains. The major fatty acids were 11-methyl C18:1 ω7c and summed feature 8 (C18:1 ω7c and/or C18:1 ω6c) in strain W99T; C16:0 and summed feature 8 in strain S113T; and 11-methyl C18:1 ω7c, cyclo-C19:0 ω8c, and summed feature 8 in strain S268T. The major polar lipids were phosphatidylglycerol and phosphatidylcholine, with diphosphatidylglycerol additionally detected in strain S268T. Polyphasic taxonomic analyses demonstrated that strain W99T represents a novel species of the genus Shimia, for which the name Shimia rhodophyticola sp. nov. is proposed (W99T = KACC 24154T = JCM 38196T), whereas strains S113T and S268T represent two novel genera and species, Neomarinovum algicola gen. nov., sp. nov. (S113T = KACC 23417T = JCM 38210T) and Phycorhabdus gracilariae gen. nov., sp. nov. (S268T = KACC 24156T = JCM 38211T), respectively. In addition, comprehensive phylogenomic and genome-based relatedness analyses support the taxonomic revision of nineteen taxa within the family Roseobacteraceae, providing a revised genome-based taxonomic framework that better reflects the evolutionary relationships within the family.
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Strains Mo2-6T, S9, KG4-3T, and 50Mo3-2, identified as coagulase-negative, Gram-stain-positive, halotolerant, non-motile coccoid bacteria, were isolated from traditional Korean soybean foods. Strains Mo2-6T and S9 were both catalase- and oxidase-negative, whereas KG4-3T and 50Mo3-2 were catalase-positive but oxidase-negative. The optimal growth conditions for Mo2-6T and S9 were 30°C, 2% NaCl, and pH 7.0, while KG4-3T and 50Mo3-2 grew best at 35°C, 2% NaCl, and pH 7.0. All strains contained menaquinone-7 as the predominant isoprenoid quinone, with anteiso-C15:0 and iso-C15:0 as the major cellular fatty acids (> 10%). Additionally, anteiso-C13:0 was a major fatty acid in strain KG4-3T. The DNA G + C contents of strains Mo2-6T, S9, KG4-3T, and 50Mo3-2 were 33.4%, 33.3%, 32.5%, and 32.7%, respectively. Phylogenetic analyses based on the 16S rRNA gene and whole-genome sequences revealed that strains Mo2-6T and S9, as well as KG4-3T and 50Mo3-2, formed distinct lineages within the genus Staphylococcus. Digital DNA-DNA hybridization (dDDH) and average nucleotide identity (ANI) analyses confirmed that strains Mo2-6T and S9, as well as KG4-3T and 50Mo3-2, belonged to the same species. Meanwhile, dDDH and ANI values between strains Mo2-6T and KG4-3T, as well as comparisons with other Staphylococcus type strains, were below the species delineation thresholds, indicating they represent novel species. Based on phenotypic, chemotaxonomic, and molecular data, we propose strain Mo2-6T as the type strain of Staphylococcus parequorum sp. nov. (=KACC 23685T =JCM 37038T) and strain KG4-3T as the type strain of Staphylococcus halotolerans sp. nov. (=KACC 23684T =JCM 37037T).
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Two Gram-stain-negative, strictly aerobic, non-motile, rod-shaped bacteria, designated D3-12ᵀ and G2-2ᵀ, were isolated from the phycosphere of marine red algae. Both strains exhibited catalase- and oxidase-positive activities. Strain D3-12ᵀ grew optimally at 30°C, pH 7.0, and 2.0–3.0% (w/v) NaCl, while strain G2-2ᵀ showed optimal growth at 30°C, pH 7.0, and 2.0% NaCl. Ubiquinone-10 was the sole respiratory quinone in both strains. The major fatty acids (> 5%) in strain D3-12ᵀ were feature 8 (C18:1 ω7c and/or C18:1 ω6c), 11-methyl-C18:1 ω7c, and C16:0, while strain G2-2ᵀ contained summed feature 8 and C16:0. The predominant polar lipids in strain D3-12ᵀ were phosphatidylcholine, phosphatidylglycerol, and phosphatidylethanolamine, whereas strain G2-2ᵀ contained phosphatidylglycerol and diphosphatidylglycerol. The genomic DNA G + C content was 59.9% for strain D3-12ᵀ and 60.2% for strain G2-2ᵀ. Phylogenetic analyses based on 16S rRNA and whole-genome sequences placed both strains into distinct lineages within the family Roseobacteraceae, separate from previously described genera. Genome-based relatedness metrics, including average nucleotide identity, digital DNA-DNA hybridization, average amino acid identity, and percentage of conserved proteins, further confirmed that these strains represent novel genera. Based on phenotypic, chemotaxonomic, and molecular characteristics, strains D3-12ᵀ and G2-2ᵀ are proposed as novel genera: Phycobium rhodophyticola gen. nov., sp. nov. (D3-12ᵀ = KACC 22712ᵀ = JCM 35528ᵀ) and Aliiphycobium algicola gen. nov., sp. nov. (G2-2ᵀ = KACC 22602ᵀ = JCM 35752ᵀ). Additionally, metabolic features relevant to interactions with marine algae, including genes associated with carbohydrate-active enzymes, vitamin biosynthesis, phenylacetic acid production, and bacterioferritin synthesis, were bioinformatically investigated.
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