Paenibacillus cucumis sp. nov. Isolated from Greenhouse Soil

Jae-Hyung Ahn; Byoung-chan Kim; Byung-Yong Kim; Soo-Jin Kim; Jaekyeong Song; Soon-Wo Kwon; Hang-Yeon Weon

doi:10.1007/s12275-014-4071-7

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Paenibacillus cucumis sp. nov. Isolated from Greenhouse Soil: Jae-Hyung Ahn ¹, Byoung-chan Kim ², Byung-Yong Kim ¹, Soo-Jin Kim ¹, Jaekyeong Song ¹, Soon-Wo Kwon ¹, Hang-Yeon Weon ¹; Journal of Microbiology 2014;52(6):460-464.
DOI: https://doi.org/10.1007/s12275-014-4071-7
Published online: May 29, 2014

¹Agricultural Microbiology Division, National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, Republic of Korea, ²Korean Collection for Type Cultures (KCTC), Biological Resource Center (BRC), Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon 305-806, Republic of Korea¹Agricultural Microbiology Division, National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, Republic of Korea, ²Korean Collection for Type Cultures (KCTC), Biological Resource Center (BRC), Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon 305-806, Republic of Korea

Corresponding author: Hang-Yeon Weon , Tel: +82-31-290-8478,

Received: 4 February 2014 • Revised: 14 May 2014 • Accepted: 14 May 2014

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Abstract

Strain CO 4-7T was isolated from greenhouse soil used for cultivation of cucumbers in Korea. The 16S rRNA gene sequence of strain CO 4-7T showed the highest sequence similarity with Paenibacillus contaminans CKOBP-6T (94.2%) among the type strains. Strain CO 4-7T was a strictly aerobic, Gram-staining-positive, endospore-forming, and motile rodshaped bacterium. Strain CO 4-7T grew at 10–45°C (optimum, 30°C), at pH 6.0–7.5 (optimum, pH 6.5) and in the presence of 0–5% NaCl (optimum, 0.5%). The DNA G+C content of strain CO 4-7T was 48.5 mol%. It contained MK-7 as the major isoprenoid quinone and anteiso-C15:0 (51.8%), C16:0 (12.7%), and iso-C16:0 (8.6%) as the major fatty acids. The cell wall contained meso-diaminopimelic acid. Based on evidence from our polyphasic taxonomic study, it was concluded that strain CO 4-7T should be classified as a novel species of the genus Paenibacillus, for which, the name Paenibacillus cucumis sp. nov. is proposed. The type strain is CO 4-7T (=KACC 17444T=JCM 19515T).

Keywords: Paenibacillus cucumis;polyphasic taxonomy;novel species;soil

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Paenibacillus cucumis sp. nov. Isolated from Greenhouse Soil

J. Microbiol. 2014;52(6):460-464. Published online May 29, 2014

DOI: https://doi.org/10.1007/s12275-014-4071-7

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