Niabella ginsenosidivorans sp. nov., isolated from compost

Kwon-Jung Yi; Wan-Taek Im; Dong-Woon Kim; Qing Mei Liu; Soo-Ki Kim

doi:10.1007/s12275-015-5463-z

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Niabella ginsenosidivorans sp. nov., isolated from compost: Kwon-Jung Yi ¹, Wan-Taek Im ^2,3, Dong-Woon Kim ⁴, Qing Mei Liu ^2,3, Soo-Ki Kim ¹; Journal of Microbiology 2015;53(11):762-766.
DOI: https://doi.org/10.1007/s12275-015-5463-z
Published online: October 28, 2015

¹Department of Animal Science and Technology, Konkuk University, Seoul 05029, Republic of Korea, ²Department of Biotechnology, Hankyoung National University, Anseong 17579, Republic of Korea, ³Center for Genetic Information, Graduate School of Bio and Information Technology, Hankyoung National University, Anseong 17579, Republic of Korea, ⁴National Institute of Animal Science, RDA, Wanju 55365, Republic of Korea¹Department of Animal Science and Technology, Konkuk University, Seoul 05029, Republic of Korea, ²Department of Biotechnology, Hankyoung National University, Anseong 17579, Republic of Korea, ³Center for Genetic Information, Graduate School of Bio and Information Technology, Hankyoung National University, Anseong 17579, Republic of Korea, ⁴National Institute of Animal Science, RDA, Wanju 55365, Republic of Korea

Corresponding author: Soo-Ki Kim , Tel: +82-2-4503728,

Received: 15 September 2015 • Revised: 30 September 2015 • Accepted: 7 October 2015

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Abstract

A Gram-reaction negative, strictly aerobic, non-motile, orange colored, and rod-shaped bacterium (designated BS26T) isolated from compost, was characterized by a polyphasic approach to clarify its taxonomic position. Strain BS26T was observed to grow optimally at 25–30°C and at pH 7.0 on R2A and nutrient media. Strain BS26T showed β-glucosidase activity that was responsible for its ability to transform ginsenoside Rb1 (one of the active components of ginseng) to ginsenoside compound-K (C-K). Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain BS26T belongs to the genus Niabella of family Chitinophagaceae and was most closely related to Niabella soli DSM 19437T (94.5% similarity), N. yanshanensis CCBAU 05354T (94.3%), and N. aurantiaca DSM 17617T (93.8%). The G+C content of genomic DNA was 47.3 mol%. Chemotaxonomic data [predominant isoprenoid quinone-MK-7, major fatty acids–iso-C15:0, iso-C15:1 G, iso-C17:0 3-OH, and summed feature 3 (comprising C16:1 ω7c and/or C16:1 ω6c)] supported the affiliation of strain BS26T to the genus Niabella. However, strain BS26T could be differentiated genotypically and phenotypically from the recognized species of the genus Niabella. The novel isolate therefore represents a novel species, for which the name Niabella ginsenosidivorans sp. nov. is proposed, with the type strain BS26T (=KACC 16620T =JCM 18199T).

Keywords: Niabella ginsenosidivorans;16S rRNA gene sequence;polyphasic taxonomy;ginsenoside;decayed feedstuff;compost

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Niabella ginsenosidivorans sp. nov., isolated from compost

J. Microbiol. 2015;53(11):762-766. Published online October 28, 2015

DOI: https://doi.org/10.1007/s12275-015-5463-z

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