Hymenobacter daeguensis sp. nov. isolated from river water

Leonid N. Ten; Yeon-Hee Lee; Jae-Jin Lee; Su-Jin Park; Seung-Yeol Lee; Sangkyu Park; Dae Sung Lee; In-Kyu Kang; Hee-Young Jung

doi:10.1007/s12275-017-6524-2

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Hymenobacter daeguensis sp. nov. isolated from river water: Leonid N. Ten ¹, Yeon-Hee Lee ¹, Jae-Jin Lee ¹, Su-Jin Park ¹, Seung-Yeol Lee ¹, Sangkyu Park ¹, Dae Sung Lee ², In-Kyu Kang ³, Hee-Young Jung ^1,4; Journal of Microbiology 2017;55(4):253-259.
DOI: https://doi.org/10.1007/s12275-017-6524-2
Published online: January 26, 2017

¹School of Applied Biosciences, Kyungpook National University, Daegu 41566, Republic of Korea, ²Department of Environmental Engineering, Kyungpook National University, Daegu 41566, Republic of Korea, ³Department of Horticultural Science, Kyungpook National University, Daegu 41566, Republic of Korea, ⁴Institute of Plant Medicine, Kyungpook National University, Daegu 41566, Republic of Korea¹School of Applied Biosciences, Kyungpook National University, Daegu 41566, Republic of Korea, ²Department of Environmental Engineering, Kyungpook National University, Daegu 41566, Republic of Korea, ³Department of Horticultural Science, Kyungpook National University, Daegu 41566, Republic of Korea, ⁴Institute of Plant Medicine, Kyungpook National University, Daegu 41566, Republic of Korea

Corresponding author: Hee-Young Jung , Tel: +82-53-950-5760,

Received: 13 October 2016 • Revised: 29 November 2016 • Accepted: 6 December 2016

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Abstract

A Gram-stain-negative, non-motile, non-spore-forming, rod- shaped, aerobic bacterial strain, designated 16F3Y-2T, was isolated from the Han River, South Korea, and was charac-terized taxonomically using a polyphasic approach. Compa-rative 16S rRNA gene sequence analysis showed that strain 16F3Y-2T belonged to the family Cytophagaceae in the phy-lum Bacteroidetes and was most closely related to ‘Hymeno-bacter terrae’ DG7A (98.01%), H. soli PB17T (97.26%), H. glaciei VUG-A130T (96.78%), H. antarcticus VUG-A42aaT (96.72%), H. ruber PB156T (96.61%), and H. saemangeumensis GSR0100T (95.77%). The G+C content of the genomic DNA of strain 16F3Y-2T was 62.9 mol%. The isolate contained MK-7 as the predominant respiratory quinone, and summed fea-ture 3 (C16:1 ω7c/C16:1 ω6c; 35.5%), C15:0 iso (16.9%), C16:1 ω5c (10.9%), and C15:0 anteiso (9.9%) as major fatty acids. The ma-jor polar lipid was phosphatidylethanolamine. Phenotypic and chemotaxonomic data supported the affiliation of strain 16F3Y-2T with the genus Hymenobacter. However, strain 16F3Y-2T exhibited relatively low levels of DNA-DNA related-ness with 'H. terrae' KCTC 32554 (44.1%) and H. soli KCTC 12607T (24.3%), clearly indicating that the isolate constitutes a new genospecies. Strain 16F3Y-2T could be differentiated from its phylogenetic neighbors on the basis of several phe-notypic, genotypic, and chemotaxonomic features. Therefore, strain 16F3Y-2T represents a novel species in the genus Hy-menobacter, for which the name Hymenobacter daeguensis sp. nov. is proposed. The type strain is 16F3Y-2T (=KCTC 52537T =JCM 31654T).

Keywords: Hymenobacter;Bacteroidetes;polyphasic taxo-nomy

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Hymenobacter daeguensis sp. nov. isolated from river water

J. Microbiol. 2017;55(4):253-259. Published online January 26, 2017

DOI: https://doi.org/10.1007/s12275-017-6524-2

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