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Volume 57(8); August 2019
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Review
MINIREVIEW] Development of bacteria as diagnostics and therapeutics by genetic engineering
Daejin Lim , Miryoung Song
J. Microbiol. 2019;57(8):637-643.   Published online May 11, 2019
DOI: https://doi.org/10.1007/s12275-019-9105-8
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AbstractAbstract
Bacteria sense and respond to the environment, communicate, and continuously interact with their surroundings, including host bodies. For more than a century, engineers have been trying to harness the natural ability of bacteria as live biotherapeutics for the treatment of diseases. Recent advances in synthetic biology facilitate the enlargement of the repertoire of genetic parts, tools, and devices that serve as a framework for biotherapy. This review describes bacterial species developed for specific diseases shown in in vitro studies and clinical stages. Here, we focus on drug delivery by programing bacteria and discuss the challenges for safety and improvement.

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Citations to this article as recorded by  
  • Engineered Microorganisms for Advancing Tumor Therapy
    Jinxuan Jia, Xiaocheng Wang, Xiang Lin, Yuanjin Zhao
    Advanced Materials.2024;[Epub]     CrossRef
  • Therapeutic bacteria and viruses to combat cancer: double-edged sword in cancer therapy: new insights for future
    Aref Yarahmadi, Mitra Zare, Masoomeh Aghayari, Hamed Afkhami, Gholam Ali Jafari
    Cell Communication and Signaling.2024;[Epub]     CrossRef
  • Physiochemically and Genetically Engineered Bacteria: Instructive Design Principles and Diverse Applications
    Xia Lin, Rong Jiao, Haowen Cui, Xuebing Yan, Kun Zhang
    Advanced Science.2024;[Epub]     CrossRef
  • Intestinal Delivery of Probiotics: Materials, Strategies, and Applications
    Chengcheng Li, Zi‐Xi Wang, Huining Xiao, Fu‐Gen Wu
    Advanced Materials.2024;[Epub]     CrossRef
  • Research and application of intelligent diagnosis and treatment engineering bacteria
    Na Zhao, Junwei Chen, Jingtian Shi, Yan Gao, Lijing Li, Liyun Dong
    Frontiers in Bioengineering and Biotechnology.2024;[Epub]     CrossRef
  • Gastrointestinal worms and bacteria: From association to intervention
    James Rooney, Cinzia Cantacessi, Javier Sotillo, Alba Cortés
    Parasite Immunology.2023;[Epub]     CrossRef
  • Bacterial Therapy of Cancer: A Way to the Dustbin of History or to the Medicine of the Future?
    Larisa N. Ikryannikova, Neonila V. Gorokhovets, Darya A. Belykh, Leonid K. Kurbatov, Andrey A. Zamyatnin
    International Journal of Molecular Sciences.2023; 24(11): 9726.     CrossRef
  • Derivation and elimination of uremic toxins from kidney-gut axis
    Ying Xu, Wen-Di Bi, Yu-Xuan Shi, Xin-Rui Liang, Hai-Yan Wang, Xue-Li Lai, Xiao-Lu Bian, Zhi-Yong Guo
    Frontiers in Physiology.2023;[Epub]     CrossRef
  • Decorated bacteria and the application in drug delivery
    Feng Wu, Jinyao Liu
    Advanced Drug Delivery Reviews.2022; 188: 114443.     CrossRef
  • Bakterie Modyfikowane Genetycznie – Perspektywy Zastosowania w Profilaktyce, Diagnostyce I Terapii
    Barbara Macura, Aneta Kiecka, Marian Szczepanik
    Postępy Mikrobiologii - Advancements of Microbiology.2022; 61(1): 21.     CrossRef
  • Bacteria and cells as alternative nano-carriers for biomedical applications
    Rafaela García-Álvarez, María Vallet-Regí
    Expert Opinion on Drug Delivery.2022; 19(1): 103.     CrossRef
  • Tabrizicola piscis sp. nov., isolated from the intestinal tract of a Korean indigenous freshwater fish, Acheilognathus koreensis
    Jeong Eun Han, Woorim Kang, June-Young Lee, Hojun Sung, Dong-Wook Hyun, Hyun Sik Kim, Pil Soo Kim, Euon Jung Tak, Yun-Seok Jeong, Jae-Yun Lee, So-Yeon Lee, Ji-Hyun Yun, Mi-Ja Jung, Na-Ri Shin, Tae Woong Whon, Myung-Suk Kang, Ki-Eun Lee, Byoung-Hee Lee, Ji
    International Journal of Systematic and Evolutionary Microbiology .2020; 70(4): 2305.     CrossRef
  • Novel Strategies for Efficient Production and Delivery of Live Biotherapeutics and Biotechnological Uses of Lactococcus lactis: The Lactic Acid Bacterium Model
    Laísa M. Tavares, Luís C. L. de Jesus, Tales F. da Silva, Fernanda A. L. Barroso, Viviane L. Batista, Nina D. Coelho-Rocha, Vasco Azevedo, Mariana M. Drumond, Pamela Mancha-Agresti
    Frontiers in Bioengineering and Biotechnology.2020;[Epub]     CrossRef
Journal Articles
PROTOCOL] Applications of different solvents and conditions for differential extraction of lipopolysaccharide in Gram-negative bacteria
Mai Phuong Nguyen , Le Viet Ha Tran , Hyun Namgoong , Yong-Hak Kim
J. Microbiol. 2019;57(8):644-654.   Published online May 23, 2019
DOI: https://doi.org/10.1007/s12275-019-9116-5
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AbstractAbstract
Lipopolysaccharide (LPS) is one of the major components in the outer membrane of Gram-negative bacteria. However, its heterogeneity and variability in different bacteria and differentiation conditions make it difficult to extract all of the structural variants. We designed a solution to improve quality and biological activity of LPS extracted from various bacteria with different types of LPS, as compared to conventional
methods
. We introduced a quality index as a simple measure of LPS purity in terms of a degree of polysaccharide content detected by absorbance at 204 nm. Further experiments using gel electrophoresis, endotoxin test, and macrophage activation test were performed to evaluate the performance and reliability of a proposed ‘T-sol’ method and the biological effectiveness and character of the LPS products. We presented that the T-sol method had differential effects on extraction of a RAW 264.7 cell-activating LPS, which was effective in the macrophage activation with similar effects in stimulating the production of TNF-alpha. In conclusion, the T-sol method provides a simple way to improve quality and biological activity of LPS with high yield.

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  • Effective Modalities of Periodontitis Induction in Rat Model
    Fazle Khuda, Badiah Baharin, Nur Najmi Mohamad Anuar, Bellen Sharon Fred Satimin, Nurrul Shaqinah Nasruddin
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  • LPS-Induced Mortality in Zebrafish: Preliminary Characterisation of Common Fish Pathogens
    Rafaela A. Santos, Cláudia Cardoso, Neide Pedrosa, Gabriela Gonçalves, Jorge Matinha-Cardoso, Filipe Coutinho, António P. Carvalho, Paula Tamagnini, Aires Oliva-Teles, Paulo Oliveira, Cláudia R. Serra
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  • Heterogeneity of Lipopolysaccharide as Source of Variability in Bioassays and LPS-Binding Proteins as Remedy
    Alexandra C. Fux, Cristiane Casonato Melo, Sara Michelini, Benjamin J. Swartzwelter, Andreas Neusch, Paola Italiani, Martin Himly
    International Journal of Molecular Sciences.2023; 24(9): 8395.     CrossRef
  • Identification workflow of endotoxins by pyrolysis–gas chromatography–mass spectrometry based on a database and chemometrics
    Jackie Jackie, Chun Kiang Chua, Norrapat Shih, Sam Fong Yau Li
    Journal of Analytical and Applied Pyrolysis.2022; 165: 105547.     CrossRef
  • Exploring the Lipidome: Current Lipid Extraction Techniques for Mass Spectrometry Analysis
    Julian Aldana, Adriana Romero-Otero, Mónica P. Cala
    Metabolites.2020; 10(6): 231.     CrossRef
  • The outer membrane glycolipids of bacteria from cold environments: isolation, characterization, and biological activity
    Angela Casillo, Ermenegilda Parrilli, Maria Luisa Tutino, Maria Michela Corsaro
    FEMS Microbiology Ecology.2019;[Epub]     CrossRef
Fulvimarina endophytica sp. nov., a novel endophytic bacterium isolated from bark of Sonneratia caseolaris
Li Tuo , Xiao-Rui Yan
J. Microbiol. 2019;57(8):655-660.   Published online June 11, 2019
DOI: https://doi.org/10.1007/s12275-019-8627-4
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AbstractAbstract
A Gram-negative, aerobic, short-rod-shaped, motile (with a terminal flagellum), non-spore-forming bacterium, designated strain 85T, was isolated from a surface-sterilized bark of Sonneratia caseolaris collected from Qinzhou in Guangxi, China and was analyzed using a polyphasic approach to determine its taxonomic position. Strain 85T grew optimally in the presence of 1–2% (w/v) NaCl at 30°C and pH 6.0–7.0. Phylogenetic analysis based on 16S rRNA gene sequence suggested that strain 85T belonged to the genus Fulvimarina and shared the highest 16S rRNA gene sequence similarity with Fulvimarina pelagi HTCC2506T (96.16%). The cell-wall peptidoglycan contained meso-diaminopimelic acid and ubiquinone Q-10 was the predominant respiratory lipoquinone. The polar lipids comprised diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, phosphatidylcholine, an unidentified amino lipid, three unidentified phospholipids and six unidentified lipids. The major fatty acid was C18:1 ω7c. The DNA G+C content of strain 85T was 65.4 mol%, and the average nucleotide identity and estimated DDH values between strain 85T and the type strain of Fulvimarina pelagi HTCC2506T were 77.3% and 21.7%, respectively. Based on the phylogenetic, phenotypic, and chemotaxonomic analyses, strain 85T should be considered as a novel species of the genus Fulvimarina with the proposed name Fulvimarina endophytica sp. nov., and its type strain is 85T (= KCTC 62717T = CGMCC 1.13665T).

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  • Description and genomic characterization of Mangrovibrevibacter kandeliae gen. nov. sp. nov., a novel carotenoid-producing endophytic bacterium isolated from branch of mangrove plants
    Chengshao Zan, Zhouqing Zheng, Xiaohui Chen, Mingsheng Chen, Feina Li, Li Tuo
    Antonie van Leeuwenhoek.2025;[Epub]     CrossRef
  • Fulvimarina uroteuthidis sp. nov., isolated from a marine invertebrate and Uroteuthis (Photololigo) edulis
    Yea-Lin Moon, Kyung Hyun Kim, Jin-Sook Park
    International Journal of Systematic and Evolutionary Microbiology .2025;[Epub]     CrossRef
  • Bacterial communities vary across populations and tissue type in red mangroves (Rhizophora mangle, Rhizophoraceae) along an expanding front
    Brendan P Scherer, Olivia U Mason, Austin R Mast
    FEMS Microbiology Ecology.2022;[Epub]     CrossRef
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Sulfitobacter profundi sp. nov., isolated from deep seawater
Jaeho Song , Hye-Jin Jang , Yochan Joung , Ilnam Kang , Jang-Cheon Cho
J. Microbiol. 2019;57(8):661-667.   Published online April 22, 2019
DOI: https://doi.org/10.1007/s12275-019-9150-3
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AbstractAbstract
A Gram-stain-negative, rod-shaped, obligately aerobic, chemoheterotrophic bacterium which is motile by means of a single polar flagellum, designated SAORIC-263T, was isolated from deep seawater of the Pacific Ocean. Phylogenetic analyses based on 16S rRNA gene sequences and genomebased phylogeny revealed that strain SAORIC-263T belonged to the genus Sulfitobacter and shared 96.1–99.9% 16S rRNA gene sequence similarities with Sulfitobacter species. Wholegenome sequencing of strain SAORIC-263T revealed a genome size of 3.9􍾘Mbp and DNA G+C content of 61.3 mol%. The SAORIC-263T genome shared an average nucleotide identity and digital DNA-DNA hybridization of 79.1–88.5% and 18.9–35.0%, respectively, with other Sulfitobacter genomes. The SAORIC-263T genome contained the genes related to benzoate degradation, which are frequently found in deep-sea metagenome. The strain contained summed feature 8 (C18:1 ω7c), C18:1 ω7c 11-methyl, and C16:0 as the predominant cellular fatty acids as well as ubiquinone-10 (Q-10) as the major respiratory quinone. The major polar lipids of the strain were phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, phosphatidylcholine, and aminolipid. On the basis of taxonomic data obtained in this study, it is suggested that strain SAORIC-263T represents a novel species of the genus Sulfitobacter, for which the name Sulfitobacter profundi sp. nov. is proposed. The type strain is SAORIC-263T (= KACC 21183T = NBRC 113428T).

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  • Complete genome sequence of Sulfitobacter pontiacus WPMT18310, a dimethylsulfoniopropionate (DMSP) degradation bacterium isolated from the Mariana Trench
    Zeping He, Lian Yuan, Haoran Li, Lihua Peng, Xiao Liang, Jin-Long Yang
    Marine Genomics.2025; 79: 101151.     CrossRef
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    Mirae Kim, Jaeho Song, Seung Yeol Shin, Kazuhiro Kogure, Ilnam Kang, Jang-Cheon Cho
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    Shituan Lin, Yunxue Guo, Zixian Huang, Kaihao Tang, Xiaoxue Wang
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    Marine Genomics.2022; 61: 100916.     CrossRef
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    Joan Tang Xiao Joe, Yung-Che Tseng, Jen-Leih Wu, Ming-Wei Lu
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Trichoderma biodiversity in major ecological systems of China
Kai Dou , Jinxin Gao , Chulong Zhang , Hetong Yang , Xiliang Jiang , Jishun Li , Yaqian Li , Wei Wang , Hongquan Xian , Shigui Li , Yan Liu , Jindong Hu , Jie Chen
J. Microbiol. 2019;57(8):668-675.   Published online May 23, 2019
DOI: https://doi.org/10.1007/s12275-019-8357-7
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AbstractAbstract
An investigation of Trichoderma biodiversity involving a large-scale environmental gradient was conducted to understand the Trichoderma distribution in China. A total of 3,999 isolates were isolated from forestry, grassland, wetland and agriculture ecosystems, and 50 species were identified based on morphological characteristics and sequence analysis of genetic markers. Trichoderma harzianum showed the largest proportion of isolates and the most extensive distribution. Hypocrea semiorbis, T. epimyces, T. konilangbra, T. piluliferum, T. pleurotum, T. pubescens, T. strictipilis, T. hunua, T. oblongisporum and an unidentified species, Trichoderma sp. MA 3642, were first reported in China. Most Trichoderma species were distributed in Jilin and Heilongjiang Provinces in northeast China and the fewest were distributed in Qinghai Province. Based on the division of ecological and geographic factors, forestry ecosystems and low-altitude regions have the greatest species biodiversity of Trichoderma.

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    Jie Yang, Cristopher Reyes Loaiciga, Hou-Ru Yue, Ya-Jing Hou, Jun Li, Cheng-Xi Li, Jing Li, Yue Zou, Shuai Zhao, Feng-Li Zhang, Xin-Qing Zhao
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Isolation, cultivation, and genome analysis of proteorhodopsincontaining SAR116-clade strain Candidatus Puniceispirillum marinum IMCC1322
Junhak Lee , Kae Kyoung Kwon , Seung-Il Lim , Jaeho Song , Ah Reum Choi , Sung-Hyun Yang , Kwang-Hwan Jung , Jung-Hyun Lee , Sung Gyun Kang , Hyun-Myung Oh , Jang-Cheon Cho
J. Microbiol. 2019;57(8):676-687.   Published online June 14, 2019
DOI: https://doi.org/10.1007/s12275-019-9001-2
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AbstractAbstract
Strain IMCC1322 was isolated from a surface water sample from the East Sea of Korea. Based on 16S rRNA analysis, IMCC1322 was found to belong to the OCS28 sub-clade of SAR116. The cells appeared as short vibrioids in logarithmicphase culture, and elongated spirals during incubation with mitomycin or in aged culture. Growth characteristics of strain IMCC1322 were further evaluated based on genomic information; proteorhodopsin (PR), carbon monoxide dehydrogenase, and dimethylsulfoniopropionate (DMSP)-utilizing enzymes. IMCC1322 PR was characterized as a functional retinylidene protein that acts as a light-driven proton pump in the cytoplasmic membrane. However, the PR-dependent phototrophic potential of strain IMCC1322 was only observed under CO-inhibited and nutrient-limited culture conditions. A DMSP-enhanced growth response was observed in addition to cultures grown on C1 compounds like methanol, formate, and methane sulfonate. Strain IMCC1322 cultivation analysis revealed biogeochemical processes characteristic of the SAR116 group, a dominant member of the microbial community in euphotic regions of the ocean. The polyphasic taxonomy of strain IMCC1322 is given as Candidatus Puniceispirillum marinum, and was confirmed by chemotaxonomic tests, in addition to 16S rRNA phylogeny and cultivation analyses.

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  • Identification of Structural and Morphogenesis Genes of Sulfitobacter Phage ΦGT1 and Placement within the Evolutionary History of the Podoviruses
    Stephen C. Hardies, Byung Cheol Cho, Gwang Il Jang, Zhiqing Wang, Chung Yeon Hwang
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    Adrià Auladell, Albert Barberán, Ramiro Logares, Esther Garcés, Josep M Gasol, Isabel Ferrera
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    Suhyun Kim, Md. Rashedul Islam, Ilnam Kang, Jang-Cheon Cho
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    Atsushi Kobiyama, Jonaira Rashid, Md. Shaheed Reza, Yuri Ikeda, Yuichiro Yamada, Toshiaki Kudo, Nanami Mizusawa, Saki Yanagisawa, Daisuke Ikeda, Shigeru Sato, Takehiko Ogata, Kazuho Ikeo, Shinnosuke Kaga, Shiho Watanabe, Kimiaki Naiki, Yoshimasa Kaga, Sat
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    Shan-Hui Li, Jaeho Song, Ilnam Kang, Juchan Hwang, Jang-Cheon Cho
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    Paul A. Steiner, Javier Geijo, Eduard Fadeev, Aleix Obiol, Eva Sintes, Thomas Rattei, Gerhard J. Herndl
    Frontiers in Microbiology.2020;[Epub]     CrossRef
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    Suhyun Kim, Miri S. Park, Jaeho Song, Ilnam Kang, Jang-Cheon Cho
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  • Advantages outweigh concerns about using genome sequence as type material for prokaryotic taxonomy
    Konstantinos T. Konstantinidis, Ramon Rosselló‐Móra, Rudolf Amann
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    Michael W. Henson, V. Celeste Lanclos, David M. Pitre, Jessica Lee Weckhorst, Anna M. Lucchesi, Chuankai Cheng, Ben Temperton, J. Cameron Thrash, Robert M. Kelly
    Applied and Environmental Microbiology.2020;[Epub]     CrossRef
Expression of sexual genes in Aspergillus fumigatus homogeneous culture produced by vegetative mass mating
Joo-Yeon Lim , Hee-Moon Park
J. Microbiol. 2019;57(8):688-693.   Published online May 11, 2019
DOI: https://doi.org/10.1007/s12275-019-9094-7
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AbstractAbstract
There are presently no studies on the genes for sexual development of Aspergillus fumigatus in situ using mating culture, primarily because of challenging experimental conditions that require a significantly long period of induction and produce developmentally heterogenous culture, harboring very few sexual organs. In order to overcome these challenges, we developed an efficient and convenient procedure called ‘vegetative mass mating (VeM)’ for study at a molecular level. The VeM method enabled production of a developmentally homogenous A. fumigatus culture, harboring many sexual organs in a plate within a short period of two weeks. Feasibility of the use of VeM for functional study of genes during A. fumigatus sexual development was evaluated by analyzing the transcription pattern of genes involved in pheromone signal transduction and regulation of sexual development. Here, we present for the first time, an in situ expression pattern of sexual genes during the mating process, induced by the VeM
method
, which will enable and promote the sexual development study of A. fumigatus at the molecular level.

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  • The Gβ-like Protein AfCpcB Affects Sexual Development, Response to Oxidative Stress and Phagocytosis by Alveolar Macrophages in Aspergillus fumigatus
    Joo-Yeon Lim, Yeon-Ju Kim, Hee-Moon Park
    Journal of Fungi.2022; 8(1): 56.     CrossRef
  • The LAMMER Kinase, LkhA, Affects Aspergillus fumigatus Pathogenicity by Modulating Reproduction and Biosynthesis of Cell Wall PAMPs
    Joo-Yeon Lim, Yeon Ju Kim, Seul Ah Woo, Jae Wan Jeong, Yu-Ri Lee, Cheol-Hee Kim, Hee-Moon Park
    Frontiers in Cellular and Infection Microbiology.2021;[Epub]     CrossRef
  • Global Sexual Fertility in the Opportunistic Pathogen Aspergillus fumigatus and Identification of New Supermater Strains
    Sameira S. Swilaiman, Céline M. O’Gorman, Wenyue Du, Janyce A. Sugui, Joanne Del Buono, Matthias Brock, Kyung J. Kwon-Chung, George Szakacs, Paul S. Dyer
    Journal of Fungi.2020; 6(4): 258.     CrossRef
FgIlv3a is crucial in branched-chain amino acid biosynthesis, vegetative differentiation, and virulence in Fusarium graminearum
Xin Liu , Yichen Jiang , Yinghui Zhang , Mingzheng Yu , Hongjun Jiang , Jianhong Xu , Jianrong Shi
J. Microbiol. 2019;57(8):694-703.   Published online May 11, 2019
DOI: https://doi.org/10.1007/s12275-019-9123-6
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AbstractAbstract
Dihydroxyacid dehydratase (DHAD), encoded by ILV3, catalyses the third step in the biosynthetic pathway of branchedchain amino acids (BCAAs), which include isoleucine (Ile), leucine (Leu), and valine (Val). Enzymes involved in BCAA biosynthesis exist in bacteria, plants, and fungi but not in mammals and are therefore attractive targets for antimicrobial or herbicide development. In this study, three paralogous ILV3 genes (FgILV3A, FgILV3B, and FgILV3C) were identified in the genome of Fusarium graminearum, the causal agent of Fusarium head blight (FHB). Deletion of FgILV3A alone or combined with FgILV3B or FgILV3C indicated an important role for FgILV3A in BCAA biosynthesis. FgILV3A deletion mutants lost the ability to grow on medium lacking amino acids. Exogenous supplementation of 1 mM Ile and Val rescued the auxotrophy of ΔFgIlv3A, though 5 mM was required to recover the growth defects in ΔFgIlv3AB and ΔFgIlv3AC strains, indicating that FgIlv3b and FgIlv3c exhibit redundant but accessory roles with FgIlv3a in BCAA biosynthesis. The auxotrophy of ΔFgIlv3A resulted in pleiotropic defects in aerial hyphal growth, in conidial formation and germination, and in aurofusarin accumulation. In addition, the mutants showed reduced virulence and deoxynivalenol production. Overall, our study demonstrates that FgIlv3a is crucial for BCAA biosynthesis in F. graminearum and a candidate fungicide target for FHB management.

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  • AflaILVB/G/I and AflaILVD are involved in mycelial production, aflatoxin biosynthesis, and fungal virulence in Aspergillus flavus
    Yarong Zhao, Chulan Huang, Rui Zeng, Peirong Chen, Kaihang Xu, Xiaomei Huang, Xu Wang
    Frontiers in Cellular and Infection Microbiology.2024;[Epub]     CrossRef
  • Histone H3 N-Terminal Lysine Acetylation Governs Fungal Growth, Conidiation, and Pathogenicity through Regulating Gene Expression in Fusarium pseudograminearum
    Hang Jiang, Lifang Yuan, Liguo Ma, Kai Qi, Yueli Zhang, Bo Zhang, Guoping Ma, Junshan Qi
    Journal of Fungi.2024; 10(6): 379.     CrossRef
  • Identification and Characterization of an Antifungal Gene Mt1 from Bacillus subtilis by Affecting Amino Acid Metabolism in Fusarium graminearum
    Pei Song, Wubei Dong
    International Journal of Molecular Sciences.2023; 24(10): 8857.     CrossRef
  • Branched-chain amino acid biosynthesis in fungi
    Gary Jones, Jane Usher, Joel T. Steyer, Richard B. Todd
    Essays in Biochemistry.2023; 67(5): 865.     CrossRef
  • FgLEU1 Is Involved in Leucine Biosynthesis, Sexual Reproduction, and Full Virulence in Fusarium graminearum
    Shaohua Sun, Mingyu Wang, Chunjie Liu, Yilin Tao, Tian Wang, Yuancun Liang, Li Zhang, Jinfeng Yu
    Journal of Fungi.2022; 8(10): 1090.     CrossRef
  • Acetolactate synthases regulatory subunit and catalytic subunit genes VdILVs are involved in BCAA biosynthesis, microscletotial and conidial formation and virulence in Verticillium dahliae
    ShengNan Shao, Biao Li, Qi Sun, PeiRu Guo, YeJuan Du, JiaFeng Huang
    Fungal Genetics and Biology.2022; 159: 103667.     CrossRef
  • Molecular targets for antifungals in amino acid and protein biosynthetic pathways
    Aleksandra Kuplińska, Kamila Rząd
    Amino Acids.2021; 53(7): 961.     CrossRef
  • MoCpa1-mediated arginine biosynthesis is crucial for fungal growth, conidiation, and plant infection of Magnaporthe oryzae
    Osakina Aron, Min Wang, Anjago Wilfred Mabeche, Batool Wajjiha, Meiqin Li, Shuai Yang, Haixia You, Yan Cai, Tian Zhang, Yunxi Li, Baohua Wang, Dongmei Zhang, Zonghua Wang, Wei Tang
    Applied Microbiology and Biotechnology.2021; 105(14-15): 5915.     CrossRef
  • Metabolic, structural, and proteomic changes in Candida albicans cells induced by the protein-carbohydrate fraction of Dendrobaena veneta coelomic fluid
    Marta J. Fiołka, Paulina Czaplewska, Sylwia Wójcik-Mieszawska, Aleksandra Lewandowska, Kinga Lewtak, Weronika Sofińska-Chmiel, Tomasz Buchwald
    Scientific Reports.2021;[Epub]     CrossRef
  • The pyruvate dehydrogenase kinase 2 (PDK2) is associated with conidiation, mycelial growth, and pathogenicity in Fusarium graminearum
    Tao Gao, Dan He, Xin Liu, Fang Ji, Jianhong Xu, Jianrong Shi
    Food Production, Processing and Nutrition.2020;[Epub]     CrossRef
  • The Intermediates in Branched-Chain Amino Acid Biosynthesis Are Indispensable for Conidial Germination of the Insect-Pathogenic Fungus Metarhizium robertsii
    Feifei Luo, Hongxia Zhou, Xue Zhou, Xiangyun Xie, You Li, Fenglin Hu, Bo Huang, Karyn N. Johnson
    Applied and Environmental Microbiology.2020;[Epub]     CrossRef
Differential expression of the major catalase, KatA in the two wild type Pseudomonas aeruginosa strains, PAO1 and PA14
Bi-o Kim , In-Young Chung , You-Hee Cho
J. Microbiol. 2019;57(8):704-710.   Published online June 11, 2019
DOI: https://doi.org/10.1007/s12275-019-9225-1
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AbstractAbstract
KatA is the major catalase required for hydrogen peroxide (H2O2) resistance and acute virulence in Pseudomonas aeruginosa PA14, whose transcription is governed by its dual promoters (katAp1 and katAp2). Here, we observed that KatA was not required for acute virulence in another wild type P. aeruginosa strain, PAO1, but that PAO1 exhibited higher KatA expression than PA14 did. This was in a good agreement with the observation that PAO1 was more resistant than PA14 to H2O2 as well as to the antibiotic peptide, polymyxin B (PMB), supposed to involve reactive oxygen species (ROS) for its antibacterial activity. The higher KatA expression in PAO1 than in PA14 was attributed to both katAp1 and katAp2 transcripts, as assessed by S1 nuclease mapping. In addition, it was confirmed that the PMB resistance is attributed to both katAp1 and katAp2 in a complementary manner in PA14 and PAO1, by exploiting the promoter mutants for each -10 box (p1m, p2m, and p1p2m). These results provide an evidence that the two widely used P. aeruginosa strains display different virulence mechanisms associated with OxyR and Anr, which need to be further characterized for better understanding of the critical virulence pathways that may differ in various P. aeruginosa strains.

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    Shijun Pan, Gang Wang, Yide Fan, Xiqing Wang, Juan Liu, Mingzhu Guo, Huan Chen, Sitong Zhang, Guang Chen
    Heliyon.2023; 9(2): e13246.     CrossRef
  • The small RNA PrrH of Pseudomonas aeruginosa regulates hemolysis and oxidative resistance in bloodstream infection
    Shenghe Zeng, Qixuan Shi, YinZhen Liu, Mo Li, Dongling Lin, Shebin Zhang, Qiwei Li, Jieying Pu, Cong Shen, Bin Huang, Cha Chen, Jianming Zeng
    Microbial Pathogenesis.2023; 180: 106124.     CrossRef
  • Eco-evolutionary dynamics of experimental Pseudomonas aeruginosa populations under oxidative stress
    Taoran Fu, Danna R. Gifford, Christopher G. Knight, Michael A. Brockhurst
    Microbiology .2023;[Epub]     CrossRef
  • The Pseudomonas aeruginosa DksA1 protein is involved in H2O2 tolerance and within-macrophages survival and can be replaced by DksA2
    Alessandra Fortuna, Diletta Collalto, Veronica Schiaffi, Valentina Pastore, Paolo Visca, Fiorentina Ascenzioni, Giordano Rampioni, Livia Leoni
    Scientific Reports.2022;[Epub]     CrossRef
  • The role of dctP gene in regulating colonization, adhesion and pathogenicity of Vibrio alginolyticus strain HY9901
    Yilin Zhang, Huimin Tan, Shiping Yang, Yucong Huang, Shuanghu Cai, Jichang Jian, Jia Cai, Qiwei Qin
    Journal of Fish Diseases.2022; 45(3): 421.     CrossRef
  • Nitrite Promotes ROS Production to Potentiate Cefoperazone-Sulbactam-Mediated Elimination to Lab-Evolved and Clinical-Evolved Pseudomonas aeruginosa
    Su-fang Kuang, Xia Li, Ding-Yun Feng, Wen-Bin Wu, Hui Li, Bo Peng, Xuan-xian Peng, Zhuang-gui Chen, Tian-tuo Zhang, Adriana E. Rosato
    Microbiology Spectrum.2022;[Epub]     CrossRef
  • Nitrate Respiration Promotes Polymyxin B Resistance in Pseudomonas aeruginosa
    Bi-o Kim, Hye-Jeong Jang, In-Young Chung, Hee-Won Bae, Eun Sook Kim, You-Hee Cho
    Antioxidants & Redox Signaling.2021; 34(6): 442.     CrossRef
  • The Bactericidal Tandem Drug, AB569: How to Eradicate Antibiotic-Resistant Biofilm Pseudomonas aeruginosa in Multiple Disease Settings Including Cystic Fibrosis, Burns/Wounds and Urinary Tract Infections
    Daniel J. Hassett, Rhett A. Kovall, Michael J. Schurr, Nalinikanth Kotagiri, Harshita Kumari, Latha Satish
    Frontiers in Microbiology.2021;[Epub]     CrossRef
  • An antipathogenic compound that targets the OxyR peroxide sensor in Pseudomonas aeruginosa
    Hyo-Young Oh, Shivakumar S. Jalde, In-Young Chung, Yeon-Ji Yoo, Hye-Jeong Jang, Hyun-Kyung Choi, You-Hee Cho
    Journal of Medical Microbiology .2021;[Epub]     CrossRef
Low-density lipoprotein as an opsonin promoting the phagocytosis of Pseudomonas aeruginosa by U937 cells
Yuxin Li , Zhi Liu , Jinli Yang , Ling Liu , Runlin Han
J. Microbiol. 2019;57(8):711-716.   Published online May 11, 2019
DOI: https://doi.org/10.1007/s12275-019-8413-3
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AbstractAbstract
Low-density lipoprotein (LDL) was recently reported to be an opsonin, enhancing the phagocytosis of group A Streptococcus (GAS) by human monocytic leukemia U937 cells due to the binding of LDL to some GAS strains. We postulated that LDL might also promote the opsonophagocytosis of Pseudomonas aeruginosa by U937 cells since this bacterium interacts with LDL. In this study, P. aeruginosa (CMCC10104), U937 cells, and human LDL were used in phagocytosis assays to test our hypothesis. Escherichia coli strain BL21, which does not interact with LDL, was used as a negative control. Colony counting and fluorescence microscopy were used to determine the bacterial quantity in the opsonophagocytosis assays. After incubation of U937 cells and P. aeruginosa with LDL (100 μg/ml) for 15 and 30 min, phagocytosis was observed to be increased by 22.71% and 32.90%, respectively, compared to that seen in the LDL-free group. However, LDL did not increase the phagocytosis of E. coli by U937 cells. In addition, we identified CD36 as a major opsonin receptor on U937 cells, since an anti-CD36 monoclonal antibody, but not an anti- CD4 monoclonal antibody, almost completely abolished the opsonophagocytosis of P. aeruginosa by U937 cells.

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  • Adhesion of Enteropathogenic, Enterotoxigenic, and Commensal Escherichia coli to the Major Zymogen Granule Membrane Glycoprotein 2
    Christin Bartlitz, Rafał Kolenda, Jarosław Chilimoniuk, Krzysztof Grzymajło, Stefan Rödiger, Rolf Bauerfeind, Aamir Ali, Veronika Tchesnokova, Dirk Roggenbuck, Peter Schierack, Isaac Cann
    Applied and Environmental Microbiology.2022;[Epub]     CrossRef
  • Lipoprotein(a), an Opsonin, Enhances the Phagocytosis of Nontypeable Haemophilus influenzae by Macrophages
    Zhi Liu, Yuxin Li, Yu Wang, Zhe Liu, Yan Su, Qiang Ma, Runlin Han, Enrique Ortega
    Journal of Immunology Research.2021; 2021: 1.     CrossRef

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